gentoo resync : 08.01.2021

3 files changed, 94 insertions, 0 deletions

diff --git a/sci-libs/cfitsio/files/cfitsio-3.490-ldflags.patch b/sci-libs/cfitsio/files/cfitsio-3.490-ldflags.patch
new file mode 100644
index 000000000000..4b04fb9cc4fe
--- /dev/null
+++ b/sci-libs/cfitsio/files/cfitsio-3.490-ldflags.patch
@@ -0,0 +1,14 @@
+diff -Naur a/configure b/configure
+--- a/configure	2018-05-09 21:16:00.000000000 +0200
++++ b/configure	2018-05-23 17:17:18.452431657 +0200
+@@ -4215,8 +4215,8 @@
+ ac_link='$CC -o conftest$ac_exeext $CFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5'
+ ac_compiler_gnu=$ac_cv_c_compiler_gnu
+ 
+-LDFLAGS="$CFLAGS"
+-LDFLAGS_BIN="$LDFLAGS"
++# LDFLAGS="$CFLAGS"
++LDFLAGS_BIN="$CFLAGS"
+ 
+ if test "x$FC" = "xnone" ; then
+   { $as_echo "$as_me:${as_lineno-$LINENO}: cfitsio: == Fortran compiler search has been overridden" >&5
diff --git a/sci-libs/cfitsio/files/cfitsio-3.490-pkgconfig.patch b/sci-libs/cfitsio/files/cfitsio-3.490-pkgconfig.patch
new file mode 100644
index 000000000000..37b47c7b820f
--- /dev/null
+++ b/sci-libs/cfitsio/files/cfitsio-3.490-pkgconfig.patch
@@ -0,0 +1,20 @@
+diff -ur a/cfitsio.pc.in b/cfitsio.pc.in
+--- a/cfitsio.pc.in	2019-05-08 17:34:49.000000000 +0200
++++ b/cfitsio.pc.in	2019-08-01 15:56:52.064310329 +0200
+@@ -1,12 +1,12 @@
+ prefix=@prefix@
+ exec_prefix=@exec_prefix@
+ libdir=@libdir@
+-includedir=@includedir@
++includedir=@includedir@/cfitsio
+ 
+ Name: cfitsio
+ Description: FITS File Subroutine Library
+ URL: https://heasarc.gsfc.nasa.gov/fitsio/
+ Version: @CFITSIO_MAJOR@.@CFITSIO_MINOR@
+-Libs: -L${libdir} -lcfitsio
+-Libs.private: -lm @LIBS@
+-Cflags: -I${includedir}
++Libs: -L${libdir} -lcfitsio
++Libs.private: -lm -lz @LIBS@
++Cflags: -D_REENTRANT -I${includedir}
diff --git a/sci-libs/cfitsio/files/cfitsio-3.490-system-zlib.patch b/sci-libs/cfitsio/files/cfitsio-3.490-system-zlib.patch
new file mode 100644
index 000000000000..6ade40ce62f3
--- /dev/null
+++ b/sci-libs/cfitsio/files/cfitsio-3.490-system-zlib.patch
@@ -0,0 +1,60 @@
+diff -ur a/Makefile.in b/Makefile.in
+--- a/Makefile.in	2019-05-08 17:34:50.000000000 +0200
++++ b/Makefile.in	2019-08-01 15:52:57.829760351 +0200
+@@ -68,9 +68,7 @@
+ 		pliocomp.c fits_hcompress.c fits_hdecompress.c \
+ 		simplerng.c @GSIFTP_SRC@
+ 
+-ZLIB_SOURCES =	zlib/adler32.c zlib/crc32.c zlib/deflate.c zlib/infback.c \
+-		zlib/inffast.c zlib/inflate.c zlib/inftrees.c zlib/trees.c \
+-		zlib/uncompr.c zlib/zcompress.c zlib/zuncompress.c zlib/zutil.c
++ZLIB_SOURCES = zlib/zcompress.c zlib/zuncompress.c
+ 
+ SOURCES = ${CORE_SOURCES} ${ZLIB_SOURCES} @F77_WRAPPERS@
+ 
+@@ -103,7 +101,7 @@
+ shared: lib${PACKAGE}${SHLIB_SUFFIX}
+ 
+ lib${PACKAGE}${SHLIB_SUFFIX}: ${OBJECTS}
+-		${SHLIB_LD} ${LDFLAGS} -o ${CFITSIO_SHLIB} ${OBJECTS} -lm ${LIBS_CURL} ${LIBS}
++		${SHLIB_LD} ${LDFLAGS} -o ${CFITSIO_SHLIB} ${OBJECTS} -lm -lz -lbz2 ${LIBS_CURL} ${LIBS}
+ 		@if [ "x${CFITSIO_SHLIB_SONAME}" != x ]; then \
+ 			ln -sf ${CFITSIO_SHLIB} ${CFITSIO_SHLIB_SONAME}; \
+ 			ln -sf ${CFITSIO_SHLIB_SONAME} $@; \
+@@ -140,28 +138,28 @@
+ 		${CC} -c ${CFLAGS} ${CPPFLAGS} ${SSE_FLAGS} ${DEFS} $<
+ 
+ smem:		smem.o lib${PACKAGE}.a ${OBJECTS}
+-		${CC} ${LDFLAGS_BIN} ${DEFS} -o $@ ${@}.o -L. -l${PACKAGE} -lm
++		${CC} ${LDFLAGS_BIN} ${DEFS} -o $@ ${@}.o -L. -l${PACKAGE} -lm -lz
+ 
+ testprog:	testprog.o lib${PACKAGE}.a ${OBJECTS}
+-		${CC} ${LDFLAGS_BIN} ${DEFS} -o $@ ${@}.o -L. -l${PACKAGE} -lm ${LIBS}
++		${CC} ${LDFLAGS_BIN} ${DEFS} -o $@ ${@}.o -L. -l${PACKAGE} -lm -lz ${LIBS}
+ 
+ fpack:		fpack.o fpackutil.o lib${PACKAGE}.a ${OBJECTS}
+-		${CC} ${LDFLAGS_BIN} ${DEFS} -o $@ ${@}.o fpackutil.o -L. -l${PACKAGE} -lm ${LIBS}
++		${CC} ${LDFLAGS_BIN} ${DEFS} -o $@ ${@}.o fpackutil.o -L. -l${PACKAGE} -lm -lz ${LIBS}
+ 
+ funpack:	funpack.o fpackutil.o lib${PACKAGE}.a ${OBJECTS}
+-		${CC} ${LDFLAGS_BIN} ${DEFS} -o $@ ${@}.o fpackutil.o -L. -l${PACKAGE} -lm ${LIBS}
++		${CC} ${LDFLAGS_BIN} ${DEFS} -o $@ ${@}.o fpackutil.o -L. -l${PACKAGE} -lm -lz ${LIBS}
+ 
+ fitscopy:	fitscopy.o lib${PACKAGE}.a ${OBJECTS}
+-		${CC} ${LDFLAGS_BIN} ${DEFS} -o $@ ${@}.o -L. -l${PACKAGE} -lm ${LIBS}
++		${CC} ${LDFLAGS_BIN} ${DEFS} -o $@ ${@}.o -L. -l${PACKAGE} -lm -lz ${LIBS}
+ 
+ speed:		speed.o lib${PACKAGE}.a ${OBJECTS}
+-		${CC} ${LDFLAGS_BIN} ${DEFS} -o $@ ${@}.o -L. -l${PACKAGE} -lm ${LIBS}
++		${CC} ${LDFLAGS_BIN} ${DEFS} -o $@ ${@}.o -L. -l${PACKAGE} -lm -lz ${LIBS}
+ 
+ imcopy:		imcopy.o lib${PACKAGE}.a ${OBJECTS}
+-		${CC} ${LDFLAGS_BIN} ${DEFS} -o $@ ${@}.o -L. -l${PACKAGE} -lm ${LIBS}
++		${CC} ${LDFLAGS_BIN} ${DEFS} -o $@ ${@}.o -L. -l${PACKAGE} -lm -lz ${LIBS}
+ 
+ cookbook:	cookbook.o lib${PACKAGE}.a ${OBJECTS}
+-		${CC} ${LDFLAGS_BIN} ${DEFS} -o $@ ${@}.o -L. -l${PACKAGE} -lm ${LIBS}
++		${CC} ${LDFLAGS_BIN} ${DEFS} -o $@ ${@}.o -L. -l${PACKAGE} -lm -lz ${LIBS}
+ 
+ eval:		# Rebuild eval_* files from flex/bison source
+ 		${FLEX} -t eval.l > eval_l.c1