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-rw-r--r--sci-biology/allpathslg/allpathslg-52488-r2.ebuild9
1 files changed, 5 insertions, 4 deletions
diff --git a/sci-biology/allpathslg/allpathslg-52488-r2.ebuild b/sci-biology/allpathslg/allpathslg-52488-r2.ebuild
index e4c4d95288fd..e68430e2462d 100644
--- a/sci-biology/allpathslg/allpathslg-52488-r2.ebuild
+++ b/sci-biology/allpathslg/allpathslg-52488-r2.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2016 Gentoo Foundation
+# Copyright 1999-2017 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
EAPI=6
@@ -8,7 +8,8 @@ inherit autotools flag-o-matic toolchain-funcs
DESCRIPTION="De novo assembly of whole-genome shotgun microreads"
# see also http://www.broadinstitute.org/software/allpaths-lg/blog/?page_id=12
HOMEPAGE="http://www.broadinstitute.org/science/programs/genome-biology/crd"
-SRC_URI="ftp://ftp.broadinstitute.org/pub/crd/ALLPATHS/Release-LG/latest_source_code/${P}.tar.gz"
+SRC_URI="ftp://ftp.broadinstitute.org/pub/crd/ALLPATHS/Release-LG/latest_source_code/${P}.tar.gz
+ https://dev.gentoo.org/~mgorny/dist/${P}-patchset.tar.bz2"
LICENSE="MIT"
SLOT="0"
@@ -22,8 +23,8 @@ DEPEND="
dev-libs/boost:="
PATCHES=(
- "${FILESDIR}/${P}_fix-buildsystem.patch"
- "${FILESDIR}/${P}_remove-namespace-std.patch"
+ "${WORKDIR}/${P}-patchset/${P}_fix-buildsystem.patch"
+ "${WORKDIR}/${P}-patchset/${P}_remove-namespace-std.patch"
)
pkg_pretend() {