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-rw-r--r--sci-biology/bwa/bwa-0.7.17.ebuild9
1 files changed, 7 insertions, 2 deletions
diff --git a/sci-biology/bwa/bwa-0.7.17.ebuild b/sci-biology/bwa/bwa-0.7.17.ebuild
index 3da06fd74f92..e1b6dbb6184e 100644
--- a/sci-biology/bwa/bwa-0.7.17.ebuild
+++ b/sci-biology/bwa/bwa-0.7.17.ebuild
@@ -1,9 +1,9 @@
-# Copyright 1999-2020 Gentoo Authors
+# Copyright 1999-2024 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=7
-inherit toolchain-funcs
+inherit flag-o-matic toolchain-funcs
DESCRIPTION="Burrows-Wheeler Alignment Tool, a fast short genomic sequence aligner"
HOMEPAGE="https://github.com/lh3/bwa/"
@@ -25,6 +25,11 @@ PATCHES=(
DOCS=( NEWS.md README-alt.md README.md )
src_configure() {
+ # -Werror=lto-type-mismatch
+ # https://bugs.gentoo.org/862255
+ # https://github.com/lh3/bwa/issues/411
+ filter-lto
+
tc-export CC AR
}