From 2719f73b6813d11d13a9650cdd2ab8ec6e69385d Mon Sep 17 00:00:00 2001
From: V3n3RiX <venerix@koprulu.sector>
Date: Sat, 9 Jul 2022 15:43:36 +0100
Subject: gentoo resync : 09.07.2022

---
 sci-biology/phyml/Manifest              |  2 +-
 sci-biology/phyml/phyml-2.4.5-r3.ebuild | 30 ------------------------------
 sci-biology/phyml/phyml-2.4.5-r4.ebuild | 27 +++++++++++++++++++++++++++
 3 files changed, 28 insertions(+), 31 deletions(-)
 delete mode 100644 sci-biology/phyml/phyml-2.4.5-r3.ebuild
 create mode 100644 sci-biology/phyml/phyml-2.4.5-r4.ebuild

(limited to 'sci-biology/phyml')

diff --git a/sci-biology/phyml/Manifest b/sci-biology/phyml/Manifest
index e9c019c5258b..e5a4c6a54843 100644
--- a/sci-biology/phyml/Manifest
+++ b/sci-biology/phyml/Manifest
@@ -1,4 +1,4 @@
 AUX phyml-2.4.5-fix-build-system.patch 1735 BLAKE2B 2ba677db3b00cc1ede4701652cd854aa8f92bc545668fae50add726fc5ddcc0694dbac7189216816026433d5c25864c819c77a887a03f6a75f111084611b6689 SHA512 95079d00d4a7373f9b6f9b17b707ae999db38a341e03f96b5f1b023ea4fd76a4027f6a46c6e33ecf7902ab4dcbc22d199b5c0f75a7b0059c90f7c11fbc9146cf
 DIST phyml_v2.4.5.tar.gz 92143 BLAKE2B f95b6b5023cd9b68e92e600edd9ee404bdec717d0b1e748c9e4f4667d732a23469762b847e4aa3c36e5cea7ce1d663ade031ec996cd6449ef1cf2fd55b96b2c8 SHA512 119716290eca0de4da05b0bacbec96139f4c89f6a033b861d1cb2655a620766bd0bea0675c4d7722a31d888652a28bf3544a643f39f11682982ede80dc5928c3
-EBUILD phyml-2.4.5-r3.ebuild 536 BLAKE2B 07640b2fdb404b127af7e8f9bcfab6d7571b9a80405cd793bc0c632bfb5642ae8da116bc983b8f6eb248ce23ac10cf4d3625943c3a943baceeb4b58267866222 SHA512 4294fd9067a16934306108c60a078ce8b9987c43d465203aa0f3a801f1359956bc4ac715863581e2d7af616244860e549c5cc9a6f28bbc3d9f5c4be6e23e6ddf
+EBUILD phyml-2.4.5-r4.ebuild 524 BLAKE2B bc347c764d77c74c0af028a7334897ca43c73607f77d713e2aad98c0d15655b39cfb5d17f50e3cfbf9f026e5168ac810affe15e71713d2a2c81b7fe99eba3eaa SHA512 d12bc078bf9f3592b2c44f09b3f5c9456d8d1574df0d98ba998cab21af68dae60dc910d90dcc736c1fe83f0e082ba4e88363d8fde3e79cd7eaf287c3c077f641
 MISC metadata.xml 564 BLAKE2B 449bbc55fcabbe9a9fea66017ff48bdf5075345496d6cc9abc6a53966245c00894093b0852eaf1a74f6746db4093d8a3be36a4f9e00b6a245d38716b146247a2 SHA512 89b24d285a76e7826563f631b991ea871c7f4e5c2048ab47cb8d1d028abcf817b5e582bf93d3ea122b019e4b4a49f386f3d95f6103bf39c0979b5f6a3c19b791
diff --git a/sci-biology/phyml/phyml-2.4.5-r3.ebuild b/sci-biology/phyml/phyml-2.4.5-r3.ebuild
deleted file mode 100644
index ef9696573577..000000000000
--- a/sci-biology/phyml/phyml-2.4.5-r3.ebuild
+++ /dev/null
@@ -1,30 +0,0 @@
-# Copyright 1999-2021 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=6
-
-inherit toolchain-funcs
-
-MY_P=${PN}_v${PV}
-
-DESCRIPTION="Estimation of large phylogenies by maximum likelihood"
-HOMEPAGE="http://atgc.lirmm.fr/phyml/"
-SRC_URI="http://www.lirmm.fr/~guindon/${MY_P}.tar.gz"
-
-LICENSE="GPL-2"
-SLOT="0"
-KEYWORDS="amd64 ~ppc x86"
-IUSE=""
-
-S=${WORKDIR}/${MY_P}
-
-PATCHES=( "${FILESDIR}"/${PN}-2.4.5-fix-build-system.patch )
-
-src_prepare() {
-	default
-	tc-export CC
-}
-
-src_install() {
-	dobin phyml
-}
diff --git a/sci-biology/phyml/phyml-2.4.5-r4.ebuild b/sci-biology/phyml/phyml-2.4.5-r4.ebuild
new file mode 100644
index 000000000000..d256370553ab
--- /dev/null
+++ b/sci-biology/phyml/phyml-2.4.5-r4.ebuild
@@ -0,0 +1,27 @@
+# Copyright 1999-2022 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=8
+
+inherit toolchain-funcs
+
+MY_P="${PN}_v${PV}"
+
+DESCRIPTION="Estimation of large phylogenies by maximum likelihood"
+HOMEPAGE="http://atgc.lirmm.fr/phyml/"
+SRC_URI="http://www.lirmm.fr/~guindon/${MY_P}.tar.gz"
+S="${WORKDIR}/${MY_P}"
+
+LICENSE="GPL-2"
+SLOT="0"
+KEYWORDS="amd64 ~ppc x86"
+
+PATCHES=( "${FILESDIR}"/${PN}-2.4.5-fix-build-system.patch )
+
+src_configure() {
+	tc-export CC
+}
+
+src_install() {
+	dobin phyml
+}
-- 
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