From f287ecad888abdeb38e617d0485de282cd6819db Mon Sep 17 00:00:00 2001 From: V3n3RiX Date: Mon, 19 Dec 2022 19:49:08 +0000 Subject: gentoo auto-resync : 19:12:2022 - 19:49:08 --- sci-libs/Manifest.gz | Bin 44390 -> 44400 bytes sci-libs/ceres-solver/Manifest | 2 - sci-libs/ceres-solver/ceres-solver-2.0.0.ebuild | 99 -------- sci-libs/cgnslib/Manifest | 2 - sci-libs/cgnslib/cgnslib-3.4.0.ebuild | 94 -------- sci-libs/dcmtk/Manifest | 4 - sci-libs/dcmtk/dcmtk-3.6.5-r2.ebuild | 87 ------- sci-libs/dcmtk/dcmtk-3.6.5-r3.ebuild | 89 -------- .../files/dcmtk-3.6.5-rename-bundled-charls.patch | 70 ------ sci-libs/dlib/Manifest | 2 - sci-libs/dlib/dlib-19.22.ebuild | 97 -------- sci-libs/flann/Manifest | 1 - sci-libs/flann/flann-1.9.1-r4.ebuild | 95 -------- sci-libs/hdf5/Manifest | 10 +- .../hdf5/files/hdf5-1.12.1-cmake_installdirs.patch | 103 --------- .../hdf5/files/hdf5-1.12.2-cmake_installdirs.patch | 164 -------------- sci-libs/hdf5/hdf5-1.10.5.ebuild | 102 --------- sci-libs/hdf5/hdf5-1.12.1-r1.ebuild | 128 ----------- sci-libs/hdf5/hdf5-1.12.1.ebuild | 119 ---------- sci-libs/hdf5/hdf5-1.12.2-r1.ebuild | 124 ---------- sci-libs/hdf5/hdf5-1.12.2-r2.ebuild | 125 ---------- sci-libs/hdf5/metadata.xml | 1 - sci-libs/hipBLAS/Manifest | 2 - sci-libs/hipBLAS/hipBLAS-4.3.0.ebuild | 42 ---- sci-libs/hipCUB/Manifest | 4 - sci-libs/hipCUB/hipCUB-4.0.0-r1.ebuild | 47 ---- sci-libs/hipCUB/hipCUB-4.3.0-r1.ebuild | 74 ------ sci-libs/hipFFT/Manifest | 5 - .../hipFFT-4.3.0-gentoo-install-locations.patch | 42 ---- .../files/hipFFT-4.3.0-remove-git-dependency.patch | 33 --- sci-libs/hipFFT/hipFFT-4.3.0.ebuild | 75 ------ sci-libs/hipSPARSE/Manifest | 5 - ...hipSPARSE-4.3.0-remove-matrices-unpacking.patch | 117 ---------- sci-libs/hipSPARSE/hipSPARSE-4.0.0-r2.ebuild | 49 ---- sci-libs/hipSPARSE/hipSPARSE-4.3.0-r2.ebuild | 105 --------- sci-libs/lapack/Manifest | 2 - sci-libs/lapack/lapack-3.10.0.ebuild | 97 -------- sci-libs/libaec/Manifest | 2 - sci-libs/libaec/libaec-1.0.4.ebuild | 30 --- sci-libs/liborigin/Manifest | 3 - .../files/liborigin-3.0.1-buildsystem.patch | 47 ---- sci-libs/liborigin/liborigin-3.0.1.ebuild | 53 ----- sci-libs/netcdf/Manifest | 3 - .../files/netcdf-4.7.4-big-endian-build.patch | 63 ------ sci-libs/netcdf/netcdf-4.7.4.ebuild | 74 ------ sci-libs/rocBLAS/Manifest | 8 - ...-4.3.0-change-default-Tensile-library-dir.patch | 39 ---- .../files/rocBLAS-4.3.0-link-system-blas.patch | 24 -- ...BLAS-4.3.0-remove-problematic-test-suites.patch | 22 -- .../files/rocBLAS-4.3.0-unbundle-Tensile.patch | 22 -- sci-libs/rocBLAS/rocBLAS-4.3.0-r1.ebuild | 146 ------------ sci-libs/rocBLAS/rocBLAS-4.3.0.ebuild | 140 ------------ sci-libs/rocFFT/Manifest | 4 - sci-libs/rocFFT/rocFFT-4.0.0-r1.ebuild | 51 ----- sci-libs/rocFFT/rocFFT-4.3.0-r1.ebuild | 106 --------- sci-libs/rocPRIM/Manifest | 4 - sci-libs/rocPRIM/rocPRIM-4.0.0-r1.ebuild | 53 ----- sci-libs/rocPRIM/rocPRIM-4.3.0-r2.ebuild | 77 ------- sci-libs/rocRAND/Manifest | 4 - sci-libs/rocRAND/rocRAND-4.0.0-r1.ebuild | 46 ---- sci-libs/rocRAND/rocRAND-4.3.0-r1.ebuild | 72 ------ sci-libs/rocSOLVER/Manifest | 3 - .../files/rocSOLVER-4.3.0-link-blas.patch | 21 -- sci-libs/rocSOLVER/rocSOLVER-4.3.0-r1.ebuild | 75 ------ sci-libs/rocSPARSE/Manifest | 5 - ...rocSPARSE-4.3.0-remove-matrices-unpacking.patch | 36 --- sci-libs/rocSPARSE/rocSPARSE-4.0.0-r1.ebuild | 51 ----- sci-libs/rocSPARSE/rocSPARSE-4.3.0-r3.ebuild | 138 ----------- sci-libs/rocThrust/Manifest | 5 - .../rocThrust-4.3.0-deprecate-hcc_detail.patch | 13 -- sci-libs/rocThrust/rocThrust-4.0.0-r1.ebuild | 49 ---- sci-libs/rocThrust/rocThrust-4.3.0-r2.ebuild | 77 ------- sci-libs/trilinos/Manifest | 6 - sci-libs/trilinos/trilinos-13.0.1-r4.ebuild | 228 ------------------- sci-libs/trilinos/trilinos-13.2.0.ebuild | 252 --------------------- 75 files changed, 1 insertion(+), 4268 deletions(-) delete mode 100644 sci-libs/ceres-solver/ceres-solver-2.0.0.ebuild delete mode 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100644 sci-libs/rocThrust/files/rocThrust-4.3.0-deprecate-hcc_detail.patch delete mode 100644 sci-libs/rocThrust/rocThrust-4.0.0-r1.ebuild delete mode 100644 sci-libs/rocThrust/rocThrust-4.3.0-r2.ebuild delete mode 100644 sci-libs/trilinos/trilinos-13.0.1-r4.ebuild delete mode 100644 sci-libs/trilinos/trilinos-13.2.0.ebuild (limited to 'sci-libs') diff --git a/sci-libs/Manifest.gz b/sci-libs/Manifest.gz index 0930cb525659..2131fd76cc68 100644 Binary files a/sci-libs/Manifest.gz and b/sci-libs/Manifest.gz differ diff --git a/sci-libs/ceres-solver/Manifest b/sci-libs/ceres-solver/Manifest index c127ff81893c..182ead837c65 100644 --- a/sci-libs/ceres-solver/Manifest +++ b/sci-libs/ceres-solver/Manifest @@ -1,6 +1,4 @@ AUX ceres-solver-2.0.0-system-mathjax.patch 325 BLAKE2B a649088517ec1bef7d5a6144de57657daeff2b5a1a0b053c0bfa81d8af7143ad5d829571be947d8853bd6d1fe39adc63b4f14a4075004775151fa649747911c6 SHA512 e16646210fddb350f5cc43665afaa88d2ffe53c817dab778c0e2534c1a0001242865a547e8a308621a9068555e7e20a57e83b0447ff5d32688ed5fb3f5694d29 -DIST ceres-solver-2.0.0.tar.gz 11225245 BLAKE2B 1761908747d460f6a84cb519b4bbb49fec7e1e36cc616b438c45ace57d10bd3bb4d0cb2795e07d5096e0b9453511c185ffdd3872e317aa8095daeb86933643b0 SHA512 843b19389f4d628b2b8b8538655cb330e092ffcc960c6896c6e3065b3a34e330c81e993b7abcd754e575742e2104087efde3526945c92f7df3f6b700984e49f9 DIST ceres-solver-2.1.0.tar.gz 3802187 BLAKE2B d8ff780cf9b9de2541c15a2b95bde07a2d1c8e60bab3a8a4b13134b99da699da452467afe3310b9f70c3c2a6bd033ea3c4bd3c401153899e9c70867fae30c633 SHA512 db777c4a4b85a9972628c714413fe9ca1a92cc6c8b14d80401842a02c4d7e7df4e9d236775e231e8337e47f21e47cd82c1a0fbcfeffbd9b654e46a66262996f2 -EBUILD ceres-solver-2.0.0.ebuild 2414 BLAKE2B 9ef712cd5bc0e9ea9cbba26cfac19576c808eeb429ff56755be4d5363ba51c6ff0783e76a77184e51a3148d8f6d51576a7975b7bd15bab44a4e63febe18dd8b3 SHA512 8a0e8300fccade8371ef334a77b081e08cb1882fb350de09c10c2b1ff03fc1ba5f61d7885c4474a8c51c5e1732c06b8934e042fe032f015e5dce91f2d5eb0eae EBUILD ceres-solver-2.1.0.ebuild 2423 BLAKE2B 793bdd2f1b78d4328d0a84a39ccb4961882f4cec09243ebdaef23dd3af6c971d44c43cc9400ea9989d973aa8cc352b483ef69ec516e7d95fba52c4365f8dfe12 SHA512 926498979b515a0e35cbb5b9551cbd7dda2cbf1dc36aef6f4617cb3595e4f493446e026ba0344a3703beea9ea410a6bc80312e505c143a2e9769ec0b493b0694 MISC metadata.xml 1454 BLAKE2B af5a9cef52650cff056c7804782e7024696ed9122e8998faad23796960d94155f5f318cec2750a4ead6610f89fe55e49301a30ec62bfc846ea2a955a430f42cf SHA512 cf928d9400bbac7ba003ad44fc6c1d77cef43a58d2cc9b399ee854880ad75b38062e3a61899403eda529e7eaba528606a8da25b5e287c53bc4721d025b6a7e59 diff --git a/sci-libs/ceres-solver/ceres-solver-2.0.0.ebuild b/sci-libs/ceres-solver/ceres-solver-2.0.0.ebuild deleted file mode 100644 index 684d229cf029..000000000000 --- a/sci-libs/ceres-solver/ceres-solver-2.0.0.ebuild +++ /dev/null @@ -1,99 +0,0 @@ -# Copyright 1999-2022 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=7 - -PYTHON_COMPAT=( python3_{8..10} ) -DOCS_BUILDER="sphinx" -DOCS_DEPEND="dev-python/sphinx_rtd_theme" -DOCS_DIR="docs/source" -inherit cmake-multilib python-any-r1 docs toolchain-funcs - -DESCRIPTION="Nonlinear least-squares minimizer" -HOMEPAGE="http://ceres-solver.org/" -SRC_URI="http://ceres-solver.org/${P}.tar.gz" - -LICENSE="sparse? ( BSD ) !sparse? ( LGPL-2.1 ) cxsparse? ( BSD )" -SLOT="0/1" -KEYWORDS="amd64 ~x86 ~amd64-linux ~x86-linux" -IUSE="cxsparse examples gflags lapack openmp +schur sparse test" - -REQUIRED_USE="test? ( gflags ) sparse? ( lapack ) abi_x86_32? ( !sparse !lapack )" - -RESTRICT="!test? ( test )" - -BDEPEND="${PYTHON_DEPS} - >=dev-cpp/eigen-3.3.4:3 - lapack? ( virtual/pkgconfig ) - doc? ( dev-libs/mathjax ) -" -RDEPEND=" - dev-cpp/glog[gflags?,${MULTILIB_USEDEP}] - cxsparse? ( sci-libs/cxsparse ) - lapack? ( virtual/lapack ) - sparse? ( - sci-libs/amd - sci-libs/camd - sci-libs/ccolamd - sci-libs/cholmod[metis(+)] - sci-libs/colamd - sci-libs/spqr - ) -" -DEPEND="${RDEPEND}" - -DOCS=( README.md VERSION ) - -PATCHES=( "${FILESDIR}/${P}-system-mathjax.patch" ) - -pkg_pretend() { - [[ ${MERGE_TYPE} != binary ]] && use openmp && tc-check-openmp -} - -pkg_setup() { - [[ ${MERGE_TYPE} != binary ]] && use openmp && tc-check-openmp - use doc && python-any-r1_pkg_setup -} - -src_prepare() { - cmake_src_prepare - - # search paths work for prefix - sed -e "s:/usr:${EPREFIX}/usr:g" \ - -i cmake/*.cmake || die - - # remove Werror - sed -e 's/-Werror=(all|extra)//g' \ - -i CMakeLists.txt || die -} - -src_configure() { - # CUSTOM_BLAS=OFF EIGENSPARSE=OFF MINIGLOG=OFF CXX11=OFF - local mycmakeargs=( - -DBUILD_BENCHMARKS=OFF - -DBUILD_EXAMPLES=$(usex examples) - -DBUILD_TESTING=$(usex test) - -DBUILD_DOCUMENTATION=$(usex doc) - -DGFLAGS=$(usex gflags) - -DLAPACK=$(usex lapack) - -DSCHUR_SPECIALIZATIONS=$(usex schur) - -DCXSPARSE=$(usex cxsparse) - -DSUITESPARSE=$(usex sparse) - -DEigen3_DIR=/usr/$(get_libdir)/cmake/eigen3 - -DCERES_THREADING_MODEL=$(usex openmp OPENMP CXX_THREADS) - ) - use doc && mycmakeargs+=( - -DCERES_DOCS_INSTALL_DIR="${EPREFIX}"/usr/share/doc/${PF} - ) - use sparse || use cxsparse || mycmakeargs+=( -DEIGENSPARSE=ON ) - cmake-multilib_src_configure -} - -src_install() { - cmake-multilib_src_install - - if use examples; then - docompress -x /usr/share/doc/${PF}/examples - dodoc -r examples data - fi -} diff --git a/sci-libs/cgnslib/Manifest b/sci-libs/cgnslib/Manifest index ad789a5bd5f6..a3e64c48d8b1 100644 --- a/sci-libs/cgnslib/Manifest +++ b/sci-libs/cgnslib/Manifest @@ -1,5 +1,3 @@ -DIST cgnslib-3.4.0.tar.gz 3393312 BLAKE2B 279d4502ff70701df6a266495ccc7750e9c51ac14bd3d5072ae8e1448b4f1e4afaefaaf254cf0afe1cc984e4d9fc7d5c161f7696f62726aaf567990ded3c9056 SHA512 e26cfb0d9f3061242d327a6c18fe40ed51bf63b61ae0d6b5cce7e6b4aa623b00e1c3fd9fe240d993323c6f4eec043fde5296a82b1f9108027f945300eec541ec DIST cgnslib-4.3.0.tar.gz 1472044 BLAKE2B 8fa59eb2c13b163553c03991af1886d2162295367094937c3b7bbbc687f098e736a927fb6835fabb43ecfbe59edcf0e58e8977e89eeb1ef12b26568fbdc78e2c SHA512 5db97b8df8cb5b108a65513e20774881c1dfa790dd96bec46119883d934db18e3f88450d287690cb785e0875af87a3ec32b6c4665c54edb623161122ee85aa93 -EBUILD cgnslib-3.4.0.ebuild 2084 BLAKE2B 51a8a6dd325255f70d60ce55ddc4870f6bee34cc30f7c98672626288be4ac17ae2a274ff31f80ec4262b6dd92cc4ac0513d26863177432674c7edf66a43771c8 SHA512 21b14ae07d64569ae4db22afb03b0623948beb190a99486e00a6565c10ca2adc77345acc75dfb2cde5c1adf9be27f21e34a117bbcfd4741f43ae5cfb59c0fa6f EBUILD cgnslib-4.3.0.ebuild 1935 BLAKE2B 9f47843ac0ccf97cd550656c41ee848318a313aead4efc17b1798df5fbdc666165c1d2d30b8f78d0ae2559aa43d44648efb7789f9f10fdebcc9fb0a552fc16dd SHA512 d925b640b0989dc5479a482bd4839c6e0608d950e43221457d09570c00f583228d756e4a0510191ae6eaf46f4f8e8d83808acc5dd6fc92f03caa5ba5d5d8559c MISC metadata.xml 1273 BLAKE2B 05b98760182f6ab2586a969e7cd49a56b077f3c0f208460967b5b240cde12c3b62655223947646d48c743cb706b81e59693c693fbcdf703c75642958491d5902 SHA512 af36842f7cefc358474fd6b3646dda0974c0ee443d56babc48955340be64719b1c4548e952c93898265d6950f32bfb7db87472ca196b290ca13a8c20ed2244c2 diff --git a/sci-libs/cgnslib/cgnslib-3.4.0.ebuild b/sci-libs/cgnslib/cgnslib-3.4.0.ebuild deleted file mode 100644 index 6eac6426bb89..000000000000 --- a/sci-libs/cgnslib/cgnslib-3.4.0.ebuild +++ /dev/null @@ -1,94 +0,0 @@ -# Copyright 1999-2020 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=7 - -FORTRAN_NEEDED="fortran" -FORTRAN_STANDARD="90 2003" - -# fails to build with ninja -CMAKE_MAKEFILE_GENERATOR="emake" - -inherit cmake fortran-2 - -DESCRIPTION="CFD General Notation System standard library" -HOMEPAGE="http://www.cgns.org/" -SRC_URI="https://github.com/CGNS/CGNS/archive/v${PV}.tar.gz -> ${P}.tar.gz" - -LICENSE="ZLIB" -SLOT="0/3" -KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" -IUSE="doc examples fortran hdf5 legacy mpi static-libs szip test tools" -RESTRICT=" - fortran? ( test ) - !test? ( test ) -" - -REQUIRED_USE=" - mpi? ( hdf5 ) - szip? ( hdf5 ) -" - -RDEPEND="hdf5? ( sci-libs/hdf5:=[mpi=,szip=] ) - tools? ( - dev-lang/tcl:= - dev-lang/tk:= - x11-libs/libXmu:= - virtual/glu - virtual/opengl - )" -DEPEND="${RDEPEND}" - -S="${WORKDIR}/CGNS-${PV}" - -pkg_setup() { - use fortran && fortran-2_pkg_setup -} - -src_prepare() { - # gentoo libdir - sed -e 's|/lib|/'$(get_libdir)'|' \ - -e '/DESTINATION/s|lib|'$(get_libdir)'|g' \ - -i src/CMakeLists.txt || die - # dont hard code link - sed -e '/link_directories/d' \ - -i src/tools/CMakeLists.txt src/cgnstools/*/CMakeLists.txt || die - cmake_src_prepare -} - -src_configure() { - local mycmakeargs=( - -DCGNS_BUILD_SHARED=ON - -DCGNS_USE_SHARED=ON - -DCGNS_BUILD_CGNSTOOLS="$(usex tools)" - -DCGNS_ENABLE_FORTRAN="$(usex fortran)" - -DCGNS_ENABLE_HDF5="$(usex hdf5)" - -DCGNS_ENABLE_LEGACY="$(usex legacy)" - -DCGNS_ENABLE_TESTS="$(usex test)" - ) - - if use hdf5; then - mycmakeargs+=( - -DHDF5_NEED_MPI="$(usex mpi)" - -DHDF5_NEED_SZIP="$(usex szip)" - -DHDF5_NEED_ZLIB="$(usex szip)" - ) - fi - - cmake_src_configure -} - -src_compile() { - # hack to allow parallel building by first producing fortran module - use fortran && cd "${BUILD_DIR}"/src && emake cgns_f.o - cmake_src_compile -} - -src_install() { - cmake_src_install - dodoc README.md release_docs/Release.txt - use static-libs || rm "${ED}"/usr/$(get_libdir)/libcgns.a - use doc && dodoc release_docs/*.pdf - docompress -x /usr/share/doc/${PF}/examples - use examples && dodoc -r src/examples -} diff --git a/sci-libs/dcmtk/Manifest b/sci-libs/dcmtk/Manifest index 099fa95fc1f6..2c5d260d120a 100644 --- a/sci-libs/dcmtk/Manifest +++ b/sci-libs/dcmtk/Manifest @@ -1,7 +1,3 @@ -AUX dcmtk-3.6.5-rename-bundled-charls.patch 2913 BLAKE2B 246d283ccb98606faaee4ef6ad25368ee47e6c96ef44e334d774625b375788e5c1ae41ca3aa6048ff6c76b1ddaae242d3c783875fe7e9e9c740675e96d8a2495 SHA512 dce186372d22e7b5ae06d3fe623029e95b9cb40005716fc97cd7493ba4fd6c4694228d878941efd9a0f57b2424f713edbebb38ed607ed2e84b65a368f647bab6 -DIST dcmtk-3.6.5.tar.gz 6483626 BLAKE2B 6182ef207b42b16ee91e94397cc8a5b2d108435a30d4c86f0b7e39af91186604f16be07a75e176bf50575446abcab21b2f63158dc4e5f2cb6de3996a0881b295 SHA512 c0cf61b0095c5708709406bfef5e8bb82dd01dbf77df7f2af2118004920bda68218eb1e4174bf92941cdae0acdb275c886570dafd29476eee2eb815e9a82830a DIST dcmtk-3.6.7.tar.gz 6877857 BLAKE2B 242ba19ed3876b27c8eeb6917f9264911c951e91ab27d2ebd3e95ab5dcf55a0e18986cede87c8ab7e6280eafeb19fda120ccb2114d24a16f222b411b44cc28d8 SHA512 b9c227f496de65424256636fa7ad266affc6593f72c6849271da94837b68c93a5b8e056ecd09d46550b6ac0530c406ab9f71751d317a5fd4171a222f9fc9ca45 -EBUILD dcmtk-3.6.5-r2.ebuild 1902 BLAKE2B 74fdd79e44326bd70fa2ee1a3159b130396c080adfa6324e711d081992215703277f9f3e5ddbb47d7d164f270857c1b8a40989f48792414cb1dd845abe016b26 SHA512 1e44f0ebdc717247a59d228f52aea3954e1e031504288f8b9cdb4522b8dddaa353ebb07727bac3a173afd80326eb6b3b653039772f5a3d91c15a5cfe4042e4b0 -EBUILD dcmtk-3.6.5-r3.ebuild 1944 BLAKE2B 0812c73548ada77a1d9d575dd2d86f1751a90e0c570a84630b9ff38a8445a3b32ecf6e9275683ea62b4b632eb0fecdf6a7acf3c160be0d091cf04c0c52c289de SHA512 639a6c649b8e4ffe62678e68b7bcf165cdc3687369abff0909ed3b488678af24b89a6c64813c4e12b2763bc4cd03830eef583afaadb96af4f9d52bffbe9c2b6b EBUILD dcmtk-3.6.7-r1.ebuild 1902 BLAKE2B c15b9a8a1344169b8336025b2d74afb81f6f44cd1e7c3c5188ebd55ca2ceb728b6fe2174b5f4c0487697374bdbf470f3b2159c840de0e8fc5b05f38a3b1f3ccc SHA512 4481690bfb48d1706fc7c02e070dfa95916a09e3405745dbdf919ae324b260fb36ec6dc6aa56f7bed58e9a9a72add7cc505ef40769e74b7d97ddc18164dcd9a8 MISC metadata.xml 228 BLAKE2B aed5dcff29c27f92a26fb6756bc7ac8951564825a29dd244c02f697ddc0cc72a3171a360dc67db9d2fb3dcf51bcfe4078bb085c5ca0e343856819732a1aaa410 SHA512 34ff32136442a7884b3bacd8d838f962357f15cbbb4e172bbfe2f042e716313d5dfd29d29d38c4acab816a85803e2c94f98f1933c688cc76c2866454891257ad diff --git a/sci-libs/dcmtk/dcmtk-3.6.5-r2.ebuild b/sci-libs/dcmtk/dcmtk-3.6.5-r2.ebuild deleted file mode 100644 index 224c2f037eda..000000000000 --- a/sci-libs/dcmtk/dcmtk-3.6.5-r2.ebuild +++ /dev/null @@ -1,87 +0,0 @@ -# Copyright 1999-2022 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=7 - -inherit cmake - -DESCRIPTION="The DICOM Toolkit" -HOMEPAGE="https://dicom.offis.de/dcmtk.php.en" -SRC_URI="https://dicom.offis.de/download/dcmtk/release/${P}.tar.gz" - -LICENSE="OFFIS" -KEYWORDS="amd64 ~arm ~arm64 ~ppc64 ~riscv x86" -SLOT="0" -IUSE="doc png ssl tcpd tiff +threads xml zlib" - -RDEPEND=" - dev-libs/icu:= - png? ( media-libs/libpng:* ) - ssl? ( dev-libs/openssl:= ) - tcpd? ( sys-apps/tcp-wrappers ) - tiff? ( media-libs/tiff:= ) - xml? ( dev-libs/libxml2:2 ) - zlib? ( sys-libs/zlib ) -" -DEPEND="${RDEPEND} - media-gfx/graphviz -" -BDEPEND="doc? ( app-doc/doxygen )" - -src_prepare() { - cmake_src_prepare - - sed -e "s:share/doc/dcmtk:&-${PV}:" \ - -e "s:DIR \"/:DIR \"/usr/:" \ - -e "s:usr/etc:etc:" \ - -e "s:/lib\":/$(get_libdir)\":" \ - -e "s:COPYRIGHT::" \ - -i CMakeLists.txt || die - sed -e 's:${CMAKE_INSTALL_PREFIX}/::' \ - -i dcmwlm/data/CMakeLists.txt doxygen/CMakeLists.txt || die - # Temporary workaround: docs are not built with CMake - sed -i -e '/include/d' doxygen/Makefile.in || die - - # fix -D deprecation warnings - sed -i -e "s|_BSD_SOURCE|_DEFAULT_SOURCE|g" \ - "${S}"/config/configure.in \ - "${S}"/CMakeLists.txt || die -} - -src_configure() { - local mycmakeargs=( - -DCMAKE_INSTALL_SYSCONFDIR="${EPREFIX}/etc" - -DDCMTK_WITH_ICU=ON - -DDCMTK_WITH_TIFF=$(usex tiff) - -DDCMTK_WITH_PNG=$(usex png) - -DDCMTK_WITH_XML=$(usex xml) - -DDCMTK_WITH_ZLIB=$(usex zlib) - -DDCMTK_WITH_OPENSSL=$(usex ssl) - -DDCMTK_WITH_DOXYGEN=$(usex doc) - -DDCMTK_WITH_THREADS=$(usex threads) - ) - - cmake_src_configure - - if use doc; then - cd "${S}"/doxygen || die - econf - fi -} - -src_compile() { - cmake_src_compile - - if use doc; then - emake -C "${S}"/doxygen - fi -} - -src_install() { - doman doxygen/manpages/man1/* - - if use doc; then - local HTML_DOCS=( "${S}"/doxygen/htmldocs/. ) - fi - cmake_src_install -} diff --git a/sci-libs/dcmtk/dcmtk-3.6.5-r3.ebuild b/sci-libs/dcmtk/dcmtk-3.6.5-r3.ebuild deleted file mode 100644 index 806ae73f1d28..000000000000 --- a/sci-libs/dcmtk/dcmtk-3.6.5-r3.ebuild +++ /dev/null @@ -1,89 +0,0 @@ -# Copyright 1999-2022 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=8 - -inherit cmake - -DESCRIPTION="The DICOM Toolkit" -HOMEPAGE="https://dicom.offis.de/dcmtk.php.en" -SRC_URI="https://dicom.offis.de/download/dcmtk/release/${P}.tar.gz" - -LICENSE="OFFIS" -KEYWORDS="~amd64 ~arm ~arm64 ~ppc64 ~riscv ~x86" -SLOT="0" -IUSE="doc png ssl tcpd tiff +threads xml zlib" - -RDEPEND=" - dev-libs/icu:= - png? ( media-libs/libpng:* ) - ssl? ( dev-libs/openssl:= ) - tcpd? ( sys-apps/tcp-wrappers ) - tiff? ( media-libs/tiff:= ) - xml? ( dev-libs/libxml2:2 ) - zlib? ( sys-libs/zlib ) -" -DEPEND="${RDEPEND}" -BDEPEND="doc? ( app-doc/doxygen )" - -PATCHES=( - "${FILESDIR}/${P}-rename-bundled-charls.patch" -) - -src_prepare() { - cmake_src_prepare - - sed -e "s:share/doc/dcmtk:&-${PV}:" \ - -e "s:DIR \"/:DIR \"/usr/:" \ - -e "s:usr/etc:etc:" \ - -e "s:/lib\":/$(get_libdir)\":" \ - -e "s:COPYRIGHT::" \ - -i CMakeLists.txt || die - sed -e 's:${CMAKE_INSTALL_PREFIX}/::' \ - -i dcmwlm/data/CMakeLists.txt doxygen/CMakeLists.txt || die - # Temporary workaround: docs are not built with CMake - sed -i -e '/include/d' doxygen/Makefile.in || die - - # fix -D deprecation warnings - sed -i -e "s|_BSD_SOURCE|_DEFAULT_SOURCE|g" \ - "${S}"/config/configure.in \ - "${S}"/CMakeLists.txt || die -} - -src_configure() { - local mycmakeargs=( - -DCMAKE_INSTALL_SYSCONFDIR="${EPREFIX}/etc" - -DDCMTK_WITH_ICU=ON - -DDCMTK_WITH_TIFF=$(usex tiff) - -DDCMTK_WITH_PNG=$(usex png) - -DDCMTK_WITH_XML=$(usex xml) - -DDCMTK_WITH_ZLIB=$(usex zlib) - -DDCMTK_WITH_OPENSSL=$(usex ssl) - -DDCMTK_WITH_DOXYGEN=$(usex doc) - -DDCMTK_WITH_THREADS=$(usex threads) - ) - - cmake_src_configure - - if use doc; then - cd "${S}"/doxygen || die - econf - fi -} - -src_compile() { - cmake_src_compile - - if use doc; then - emake -C "${S}"/doxygen - fi -} - -src_install() { - doman doxygen/manpages/man1/* - - if use doc; then - local HTML_DOCS=( "${S}"/doxygen/htmldocs/. ) - fi - cmake_src_install -} diff --git a/sci-libs/dcmtk/files/dcmtk-3.6.5-rename-bundled-charls.patch b/sci-libs/dcmtk/files/dcmtk-3.6.5-rename-bundled-charls.patch deleted file mode 100644 index 5bb51fdc3273..000000000000 --- a/sci-libs/dcmtk/files/dcmtk-3.6.5-rename-bundled-charls.patch +++ /dev/null @@ -1,70 +0,0 @@ -Upstream: https://git.dcmtk.org/?p=dcmtk.git;a=commitdiff;h=09afb527bb889932f919c28f47b08c84fe19ab32 - -From 46b4b4c2d48612b60f27969db142599f56042a47 Mon Sep 17 00:00:00 2001 -From: Marco Eichelberg -Date: Tue, 10 Nov 2020 12:31:00 +0100 -Subject: [PATCH] Renamed libcharls to libdcmtkcharls. - -Renamed the CharLS JPEG-LS library that is built into DCMTK from -"charls" to "dcmtkcharls" to avoid a naming conflict with another -installation of the CharLS library when building shared libraries. - -Thanks to Mathieu Malaterre for the suggestion -and the patch. ---- - dcmjpls/apps/CMakeLists.txt | 2 +- - dcmjpls/libcharls/CMakeLists.txt | 4 ++-- - dcmjpls/libcharls/intrface.h | 2 +- - dcmjpls/libsrc/CMakeLists.txt | 2 +- - 4 files changed, 5 insertions(+), 5 deletions(-) - -diff --git a/dcmjpls/apps/CMakeLists.txt b/dcmjpls/apps/CMakeLists.txt -index 2a9a452..0cb3f53 100644 ---- a/dcmjpls/apps/CMakeLists.txt -+++ b/dcmjpls/apps/CMakeLists.txt -@@ -8,5 +8,5 @@ endforeach() - - # make sure executables are linked to the corresponding libraries - foreach(PROGRAM dcmcjpls dcmdjpls dcml2pnm) -- DCMTK_TARGET_LINK_MODULES(${PROGRAM} dcmjpls charls dcmimage dcmimgle dcmdata oflog ofstd ofstd) -+ DCMTK_TARGET_LINK_MODULES(${PROGRAM} dcmjpls dcmtkcharls dcmimage dcmimgle dcmdata oflog ofstd ofstd) - endforeach() -diff --git a/dcmjpls/libcharls/CMakeLists.txt b/dcmjpls/libcharls/CMakeLists.txt -index 0c5b143..ae0c017 100644 ---- a/dcmjpls/libcharls/CMakeLists.txt -+++ b/dcmjpls/libcharls/CMakeLists.txt -@@ -2,6 +2,6 @@ - include_directories("${dcmjpls_SOURCE_DIR}/libcharls" "${ofstd_SOURCE_DIR}/include") - - # create library from source files --DCMTK_ADD_LIBRARY(charls header intrface jpegls) -+DCMTK_ADD_LIBRARY(dcmtkcharls header intrface jpegls) - --DCMTK_TARGET_LINK_MODULES(charls ofstd oflog) -+DCMTK_TARGET_LINK_MODULES(dcmtkcharls ofstd oflog) -diff --git a/dcmjpls/libcharls/intrface.h b/dcmjpls/libcharls/intrface.h -index c8fdaa9..3aa27fd 100644 ---- a/dcmjpls/libcharls/intrface.h -+++ b/dcmjpls/libcharls/intrface.h -@@ -10,7 +10,7 @@ - #include "dcmtk/ofstd/ofstd.h" /* for size_t */ - #include "dcmtk/ofstd/ofdefine.h" /* for DCMTK_DECL_EXPORT */ - --#ifdef charls_EXPORTS -+#ifdef dcmtkcharls_EXPORTS - #define DCMTK_CHARLS_EXPORT DCMTK_DECL_EXPORT - #else - #define DCMTK_CHARLS_EXPORT DCMTK_DECL_IMPORT -diff --git a/dcmjpls/libsrc/CMakeLists.txt b/dcmjpls/libsrc/CMakeLists.txt -index 314face..bd928f8 100644 ---- a/dcmjpls/libsrc/CMakeLists.txt -+++ b/dcmjpls/libsrc/CMakeLists.txt -@@ -4,4 +4,4 @@ include_directories("${dcmjpls_SOURCE_DIR}/include" "${ofstd_SOURCE_DIR}/include - # create library from source files - DCMTK_ADD_LIBRARY(dcmjpls djcparam djdecode djencode djrparam djcodecd djutils djcodece) - --DCMTK_TARGET_LINK_MODULES(dcmjpls ofstd oflog dcmdata dcmimgle dcmimage charls) -+DCMTK_TARGET_LINK_MODULES(dcmjpls ofstd oflog dcmdata dcmimgle dcmimage dcmtkcharls) --- -2.1.4 - diff --git a/sci-libs/dlib/Manifest b/sci-libs/dlib/Manifest index 84b432a4936b..4c2d69a3f1c2 100644 --- a/sci-libs/dlib/Manifest +++ b/sci-libs/dlib/Manifest @@ -1,5 +1,3 @@ -DIST dlib-19.22.tar.gz 10796236 BLAKE2B 5ca840536f61b38557d39ff6c24d9727f7c494e032d5abf912ccf83f724ecad61ce241126478eeed8b14e33b994af4065b1cfaf17a3b29cfa0dafc236e4c2a06 SHA512 49af41460de9aa270e47ee1d158231e87ffdbbf56ca29a3382dd896fcf81ef04729e59bd9c26eac63fb088cefce651149e5cdb0ffed73bfd6b05127887114d94 DIST dlib-19.24.tar.gz 10863367 BLAKE2B eda85c6ec38fcf212754aae2cdb68539425028735b5148a2f6668ac19f2583129585a7101b74fe202fbfa3d3d2f09e533805a82f8291540919a7eb11483812e8 SHA512 f6ef2fec0977782cdcc15c6340bd91e3471294332de391405f14d86e9fd0cfcc8195fbf5b702f8d269a90b06db23a8134d112ed3fcfb780ff0433d988c41d199 -EBUILD dlib-19.22.ebuild 2408 BLAKE2B ea18c8f137dc925a5fdffbd728c346906bfccb703d597df09bd08cca29d1c655b3897a71557015336c4edfc2ea4bedc65f8c5134007df0ee7871d7a854eb3a67 SHA512 c7cedc466f3ac4af898c797f328c6c095d548c93f1c45be39c55bf326bb783317bbb3fd83bb57f11caae0ac1c51011fa16f0bb3b04a2ae9fe4b4b82313a2dcf9 EBUILD dlib-19.24.ebuild 2513 BLAKE2B 8faf0274b9ef05963a34b12c2bd47fdf89999d0af7cde697ad671b5de39b565a0b23ca555c1824575781e6bd2cf9fe2cbe8e55673e74ecc14e67ec5ab768b342 SHA512 d3934515077f1d3810bf7dbec5c37b480c615ce24075ef0048c3076eeaf1122d32f1d241620f77231c2fc6c508bb074b9bf886055e639a77298060b3c8eb7b6a MISC metadata.xml 1003 BLAKE2B 3c4e623c6abbd4d1ec8a9402009b2d01e6edb547bfd24f03c27853d0386170833553feecc7b0f6b751a3ad4e52f0575a4a87fbcf801a0952fc3d4e5c77645a43 SHA512 2c59cabd74e9433b9b31b96d1f476c2c9200cce51960c09de5ebd7aabbfe4cff1f4449a6a9ecaaf1907f58dd12c04039a9f58f69f2d036bc18bf82b4438cbc01 diff --git a/sci-libs/dlib/dlib-19.22.ebuild b/sci-libs/dlib/dlib-19.22.ebuild deleted file mode 100644 index 04deb083df05..000000000000 --- a/sci-libs/dlib/dlib-19.22.ebuild +++ /dev/null @@ -1,97 +0,0 @@ -# Copyright 1999-2021 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=7 - -PYTHON_COMPAT=( python3_{7..9} ) -DISTUTILS_OPTIONAL=1 -inherit cmake cuda distutils-r1 - -DESCRIPTION="Numerical and networking C++ library" -HOMEPAGE="http://dlib.net/" -SRC_URI="https://github.com/davisking/dlib/archive/v${PV}.tar.gz -> ${P}.tar.gz" - -LICENSE="Boost-1.0" -SLOT="0/${PV}" -KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" -IUSE="cblas cuda debug examples gif jpeg lapack mkl png python sqlite test X cpu_flags_x86_avx cpu_flags_x86_sse2 cpu_flags_x86_sse4_1" -REQUIRED_USE="python? ( png ${PYTHON_REQUIRED_USE} )" -RESTRICT="!test? ( test )" - -# doc needs a bunch of deps not in portage -RDEPEND=" - cblas? ( virtual/cblas ) - cuda? ( dev-libs/cudnn:= ) - gif? ( media-libs/giflib:= ) - jpeg? ( virtual/jpeg:0= ) - lapack? ( virtual/lapack ) - mkl? ( sci-libs/mkl ) - png? ( media-libs/libpng:0= ) - python? ( ${PYTHON_DEPS} ) - sqlite? ( dev-db/sqlite:3 ) - X? ( x11-libs/libX11 )" -DEPEND="${RDEPEND}" -BDEPEND="python? ( test? ( dev-python/pytest[${PYTHON_USEDEP}] ) )" - -DOCS=( docs/README.txt ) - -src_prepare() { - use cuda && cuda_src_prepare - cmake_src_prepare - use python && distutils-r1_src_prepare -} - -src_configure() { - local mycmakeargs=( - -DDLIB_ENABLE_ASSERTS=$(usex debug) - -DDLIB_ENABLE_STACK_TRACE=$(usex debug) - -DDLIB_GIF_SUPPORT=$(usex gif) - -DDLIB_JPEG_SUPPORT=$(usex jpeg) - -DDLIB_PNG_SUPPORT=$(usex png) - -DDLIB_LINK_WITH_SQLITE3=$(usex sqlite) - -DDLIB_NO_GUI_SUPPORT=$(usex X OFF ON) - -DDLIB_USE_BLAS=$(usex cblas) - -DDLIB_USE_CUDA=$(usex cuda) - -DDLIB_USE_LAPACK=$(usex lapack) - -DUSE_AVX_INSTRUCTIONS=$(usex cpu_flags_x86_avx) - -DUSE_SSE2_INSTRUCTIONS=$(usex cpu_flags_x86_sse2) - -DUSE_SSE4_INSTRUCTIONS=$(usex cpu_flags_x86_sse4_1) - ) - cmake_src_configure - use python && distutils-r1_src_configure -} - -src_compile() { - cmake_src_compile - use python && distutils-r1_src_compile -} - -python_test() { - esetup.py test -} - -src_test() { - ( - local BUILD_DIR="${BUILD_DIR}"/dlib/test - mkdir -p "${BUILD_DIR}" || die - cd "${BUILD_DIR}" >/dev/null || die - - local CMAKE_USE_DIR="${S}"/dlib/test - cmake_src_configure - cmake_build - - ./dtest --runall || die "Tests failed" - ) - - use python && distutils-r1_src_test -} - -src_install() { - cmake_src_install - use python && distutils-r1_src_install - - if use examples; then - dodoc -r examples - docompress -x /usr/share/doc/${PF} - fi -} diff --git a/sci-libs/flann/Manifest b/sci-libs/flann/Manifest index 024294dbf0da..caaaa931223f 100644 --- a/sci-libs/flann/Manifest +++ b/sci-libs/flann/Manifest @@ -5,6 +5,5 @@ AUX flann-1.9.1-cuda-9.patch 850 BLAKE2B f193a6fd25a1d2cd45201d547fb444393cb82f3 AUX flann-1.9.1-system-lz4-pkgconfig.patch 1168 BLAKE2B 9fadff93a2d603aee3eadd72d28f5af4f41b63803aa7d878d9b23e30a9c2384d48f85d2c8be8cfcd47542b35e929b8f35afc70caf6dc6c676b6521ebc6f829d7 SHA512 ba1c6307f2504814adfc872f1cbcd4fdaab23c56d84427c11c20e3ff75263ac97be0813cf9c5e9acd1a945d0c5dbb2b7660ada3290ffc7332ea0c90b1bc26ffa AUX flann-1.9.1-system-lz4.patch 4934 BLAKE2B eea32abae8b13d5d0e5149c58b2639c1b6f3bbbedfa8aa91f5fb83afca4726571eb4e01eb440eb913b54f8a03124bc0266c8b039b6448bcdc0bc5e87a9512c6f SHA512 acb67eb59b400b82722f064e529fc86f43c4e16ba097a3742b5717b33fcd35a619c73ec6ea6391b23f906d4bc40a5167b56cffd0267bc2c8259b7298ad414e65 DIST flann-1.9.1.tar.gz 485391 BLAKE2B bf1e1e7feb33e939e1d0586db593bea3fdf66726fbadec63df9ed9c7bdb678babb11001769f0d041a7a569186b3d700db8b96af5eb9740615f6dfd880460f68b SHA512 0da78bb14111013318160dd3dee1f93eb6ed077b18439fd6496017b62a8a6070cc859cfb3e08dad4c614e48d9dc1da5f7c4a21726ee45896d360506da074a6f7 -EBUILD flann-1.9.1-r4.ebuild 2380 BLAKE2B ee30376d1c3a968a0a92ea5bfa9062db6773b087b5ee60517d1d9dde512d48b931a91fa83c9fef49a6eb4cf8e5117cc1f77085df1913fed3875d97a9edd02786 SHA512 8d18d6a7d8e6f3f5e0cce5b0d40b258768a59254f6d20e40256ec3d46cd5c304919623cd0ed109fd053f9a55552149d6a04e7f7b6184e31fa11473fb783af39b EBUILD flann-1.9.1-r5.ebuild 2278 BLAKE2B 053172cbb1e76fe263efa976e878c4bd3aa7eab6739cc92a5d0d2fb448d0c27483d37a8c51a668e2e708bdff5e1a9aa9770031aaeb363aaf2fdc7ab819b490b8 SHA512 ce846229845592355b012691c9c17b0243ee6e7fa0b6376999b2e8bb5a84709f1856ef1cfdb467ecc601e13326d52fcfeccf7bbe76ce8549579c53728a9f9ac5 MISC metadata.xml 972 BLAKE2B b192aee4ab043f8c3f69526727aad60e2613a6b94c5b686404593ab40213afeacde74009d305fee83c6d670d50af59207ad95189a03c53fb8193abcfdfd69c97 SHA512 77b1bf0f269cd7bd63c06442cf2cd9d1405f2a40925da469a23827a1e2461e89b8ab1b80d202ead404e7fe25f9d24a91cc4b36d775349ddd9dd50168097d3db4 diff --git a/sci-libs/flann/flann-1.9.1-r4.ebuild b/sci-libs/flann/flann-1.9.1-r4.ebuild deleted file mode 100644 index 299876df8ad3..000000000000 --- a/sci-libs/flann/flann-1.9.1-r4.ebuild +++ /dev/null @@ -1,95 +0,0 @@ -# Copyright 1999-2021 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=7 - -inherit cmake cuda flag-o-matic toolchain-funcs - -DESCRIPTION="Fast approximate nearest neighbor searches in high dimensional spaces" -HOMEPAGE="https://github.com/mariusmuja/flann" -SRC_URI="https://github.com/mariusmuja/${PN}/archive/${PV}.tar.gz -> ${P}.tar.gz" - -LICENSE="BSD" -SLOT="0" -KEYWORDS="amd64 ~arm arm64 ~ppc x86 ~amd64-linux ~x86-linux" -IUSE="cuda doc examples mpi octave openmp" - -BDEPEND=" - app-arch/unzip - doc? ( dev-tex/latex2html ) -" -DEPEND=" - app-arch/lz4:= - cuda? ( >=dev-util/nvidia-cuda-toolkit-5.5 ) - mpi? ( - dev-libs/boost:=[mpi] - sci-libs/hdf5[mpi] - ) - !mpi? ( !sci-libs/hdf5[mpi] ) - octave? ( >=sci-mathematics/octave-3.6.4-r1 ) -" -RDEPEND="${DEPEND}" -# TODO: -# readd dependencies for test suite, -# requires multiple ruby dependencies - -PATCHES=( - "${FILESDIR}"/${P}-cmake-3.11{,-1}.patch # bug 678030 - "${FILESDIR}"/${P}-cuda-9.patch - "${FILESDIR}"/${P}-system-lz4.patch # bug 681898 - "${FILESDIR}"/${P}-system-lz4-pkgconfig.patch # bug 827263 -) - -pkg_pretend() { - [[ ${MERGE_TYPE} != binary ]] && use openmp && tc-check-openmp -} - -pkg_setup() { - [[ ${MERGE_TYPE} != binary ]] && use openmp && tc-check-openmp -} - -src_prepare() { - # bug #302621 - use mpi && export CXX=mpicxx - # produce pure octave files - # octave gentoo installation for .m files respected - sed -i \ - -e 's/--mex//' \ - -e 's/\.mex/\.oct/' \ - -e '/FILES/s/${MEX_FILE}//' \ - -e 's:share/flann/octave:share/octave/site/m:' \ - -e "/CUSTOM_TARGET/a\INSTALL(FILES \${MEX_FILE} DESTINATION libexec/octave/site/oct/${CHOST})" \ - src/matlab/CMakeLists.txt || die - use cuda && cuda_src_prepare - - cmake_src_prepare -} - -src_configure() { - append-cxxflags -std=c++11 - - # python bindings are split off into dev-python/pyflann - local mycmakeargs=( - -DBUILD_C_BINDINGS=ON - -DBUILD_PYTHON_BINDINGS=OFF - -DPYTHON_EXECUTABLE= - -DBUILD_CUDA_LIB=$(usex cuda) - -DBUILD_EXAMPLES=$(usex examples) - -DBUILD_DOC=$(usex doc) - -DBUILD_TESTS=OFF - -DBUILD_MATLAB_BINDINGS=$(usex octave) - -DUSE_MPI=$(usex mpi) - -DUSE_OPENMP=$(usex openmp) - ) - use cuda && mycmakeargs+=( - -DCUDA_NVCC_FLAGS="${NVCCFLAGS} --linker-options \"-arsch\"" - ) - use doc && mycmakeargs+=( -DDOCDIR=share/doc/${PF} ) - - cmake_src_configure -} - -src_install() { - cmake_src_install - find "${D}" -name 'lib*.a' -delete || die -} diff --git a/sci-libs/hdf5/Manifest b/sci-libs/hdf5/Manifest index 21188e4f22af..bcaff401bd57 100644 --- a/sci-libs/hdf5/Manifest +++ b/sci-libs/hdf5/Manifest @@ -1,19 +1,11 @@ -AUX hdf5-1.12.1-cmake_installdirs.patch 4313 BLAKE2B 78b894a3535c71dbd673e2061e09e1a57d57c1d65418ac87e51669e7cf8a77f023aac076686e978b89903fb0aa74f0511f779ceb149ab783e5624ec24bf5c6a6 SHA512 4a8fce1e3a5ae9d8cdca4fa377011fb7333de0b233e79c6eeed9a24154925eb8dededfe8cff4e28a7cedeb2fbfe194df1a5f18629d56de47b4ba3097824e6b7d -AUX hdf5-1.12.2-cmake_installdirs.patch 7289 BLAKE2B 7a8846200194c93f014e1862165d153e3dc21df87f08458c827356051cb4e1ffc90df4f176063356347eea881153f48c791cf51fa209ec3b5ca883edc13c06b1 SHA512 3c0933d64207ddead06cd575d40d919402a94a5317f14da1a5ee3b06c88ac65b108754d698715618b87104d8d471eaa6131310b0077202eac0ed221b3da18c5b AUX hdf5-1.12.2-no-messing-ldpath.patch 1086 BLAKE2B 77aba02cd8f3663883fa5cf91b3f77067163f58ec4270d22e2c4e1a5b9b1cc138a2e9dd1c7a44331165c69d6c7a0427fe2708bae63958b416a9f26c799de7443 SHA512 8b8aa080cb6feded376900cf9f4b1f1bbe98550b37e9ae8ad660419f732e686aae2ff6eac37e7810ee438a0e9c1b7a37d24f5db8590cce0c91f482ec7b873527 AUX hdf5-1.12.2-no-strip-symbols.patch 434 BLAKE2B 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989b487ac17b7cfc1920144207dbe101cb46d059e2f219d3da15094a7cd2da9979d0d11ef177f2c5542f010aefb4c1be10768d5c98a3e0b6235a4228b452f283 SHA512 e95daa26ad42f923ab113db8e62d2a37e4d8296e1cdc8e856a2f4ab5ffbcd0797c7be7365d3f3d55ab1e6cb45f17e6264bcf0df8d2ae013e972e28f679dfce61 +MISC metadata.xml 826 BLAKE2B fd131bb207e4ab863ef7c05ab95e5c0254fa08230139a2508ab5f0c363809b0735532498ad26cc39621495a063de86ab5bd97447514ff561a63302e8b1d7d26d SHA512 290883ed9bf3de60bf04e2474c4db50e095b1b87974867e58601a5c5c2f98d6b839ed22d9ce2798bc44f484f1a38ee4b6df99aaea7d134629bd441d34b5a29b5 diff --git a/sci-libs/hdf5/files/hdf5-1.12.1-cmake_installdirs.patch b/sci-libs/hdf5/files/hdf5-1.12.1-cmake_installdirs.patch deleted file mode 100644 index 8c4dc34cb80c..000000000000 --- a/sci-libs/hdf5/files/hdf5-1.12.1-cmake_installdirs.patch +++ /dev/null @@ -1,103 +0,0 @@ ---- a/c++/src/CMakeLists.txt -+++ b/c++/src/CMakeLists.txt -@@ -180,8 +180,8 @@ - #----------------------------------------------------------------------------- - set (_PKG_CONFIG_PREFIX ${CMAKE_INSTALL_PREFIX}) - set (_PKG_CONFIG_EXEC_PREFIX \${prefix}) --set (_PKG_CONFIG_LIBDIR \${exec_prefix}/lib) --set (_PKG_CONFIG_INCLUDEDIR \${prefix}/include) -+set (_PKG_CONFIG_LIBDIR \${exec_prefix}/${CMAKE_INSTALL_LIBDIR}) -+set (_PKG_CONFIG_INCLUDEDIR \${prefix}/${CMAKE_INSTALL_INCLUDEDIR}) - set (_PKG_CONFIG_LIBNAME "${HDF5_CPP_LIB_CORENAME}") - set (_PKG_CONFIG_VERSION "${HDF5_PACKAGE_VERSION}") - ---- a/CMakeLists.txt -+++ b/CMakeLists.txt -@@ -46,6 +46,13 @@ - endif() - endif () - -+include (GNUInstallDirs) -+set (HDF5_INSTALL_BIN_DIR "${CMAKE_INSTALL_FULL_BINDIR}") -+set (HDF5_INSTALL_DATA_DIR "${CMAKE_INSTALL_FULL_DATADIR}") -+set (HDF5_INSTALL_DOC_DIR "${CMAKE_INSTALL_FULL_DOCDIR}") -+set (HDF5_INSTALL_INCLUDE_DIR "${CMAKE_INSTALL_FULL_INCLUDEDIR}") -+set (HDF5_INSTALL_LIB_DIR "${CMAKE_INSTALL_FULL_LIBDIR}") -+ - #----------------------------------------------------------------------------- - # Instructions for use : Sub-Project Build - # ---- a/fortran/src/CMakeLists.txt -+++ b/fortran/src/CMakeLists.txt -@@ -537,8 +537,8 @@ - #----------------------------------------------------------------------------- - set (_PKG_CONFIG_PREFIX ${CMAKE_INSTALL_PREFIX}) - set (_PKG_CONFIG_EXEC_PREFIX \${prefix}) --set (_PKG_CONFIG_LIBDIR \${exec_prefix}/lib) --set (_PKG_CONFIG_INCLUDEDIR \${prefix}/include) -+set (_PKG_CONFIG_LIBDIR \${exec_prefix}/${CMAKE_INSTALL_LIBDIR}) -+set (_PKG_CONFIG_INCLUDEDIR \${prefix}/${CMAKE_INSTALL_INCLUDEDIR}) - set (_PKG_CONFIG_LIBNAME "${HDF5_F90_LIB_CORENAME}") - set (_PKG_CONFIG_VERSION "${HDF5_PACKAGE_VERSION}") - ---- a/hl/c++/src/CMakeLists.txt -+++ b/hl/c++/src/CMakeLists.txt -@@ -91,8 +91,8 @@ - #----------------------------------------------------------------------------- - set (_PKG_CONFIG_PREFIX ${CMAKE_INSTALL_PREFIX}) - set (_PKG_CONFIG_EXEC_PREFIX \${prefix}) --set (_PKG_CONFIG_LIBDIR \${exec_prefix}/lib) --set (_PKG_CONFIG_INCLUDEDIR \${prefix}/include) -+set (_PKG_CONFIG_LIBDIR \${exec_prefix}/${CMAKE_INSTALL_LIBDIR}) -+set (_PKG_CONFIG_INCLUDEDIR \${prefix}/${CMAKE_INSTALL_INCLUDEDIR}) - set (_PKG_CONFIG_LIBNAME "${HDF5_HL_CPP_LIB_CORENAME}") - set (_PKG_CONFIG_VERSION "${HDF5_PACKAGE_VERSION}") - ---- a/hl/fortran/src/CMakeLists.txt -+++ b/hl/fortran/src/CMakeLists.txt -@@ -324,8 +324,8 @@ - #----------------------------------------------------------------------------- - set (_PKG_CONFIG_PREFIX ${CMAKE_INSTALL_PREFIX}) - set (_PKG_CONFIG_EXEC_PREFIX \${prefix}) --set (_PKG_CONFIG_LIBDIR \${exec_prefix}/lib) --set (_PKG_CONFIG_INCLUDEDIR \${prefix}/include) -+set (_PKG_CONFIG_LIBDIR \${exec_prefix}/${CMAKE_INSTALL_LIBDIR}) -+set (_PKG_CONFIG_INCLUDEDIR \${prefix}/${CMAKE_INSTALL_INCLUDEDIR}) - set (_PKG_CONFIG_LIBNAME "${HDF5_HL_F90_LIB_CORENAME}") - set (_PKG_CONFIG_VERSION "${HDF5_PACKAGE_VERSION}") - ---- a/hl/src/CMakeLists.txt -+++ b/hl/src/CMakeLists.txt -@@ -123,8 +123,8 @@ - #----------------------------------------------------------------------------- - set (_PKG_CONFIG_PREFIX ${CMAKE_INSTALL_PREFIX}) - set (_PKG_CONFIG_EXEC_PREFIX \${prefix}) --set (_PKG_CONFIG_LIBDIR \${exec_prefix}/lib) --set (_PKG_CONFIG_INCLUDEDIR \${prefix}/include) -+set (_PKG_CONFIG_LIBDIR \${exec_prefix}/${CMAKE_INSTALL_LIBDIR}) -+set (_PKG_CONFIG_INCLUDEDIR \${prefix}/${CMAKE_INSTALL_INCLUDEDIR}) - set (_PKG_CONFIG_LIBNAME "${HDF5_HL_LIB_CORENAME}") - set (_PKG_CONFIG_VERSION "${HDF5_PACKAGE_VERSION}") - ---- a/src/CMakeLists.txt -+++ b/src/CMakeLists.txt -@@ -1311,8 +1311,8 @@ - #----------------------------------------------------------------------------- - set (_PKG_CONFIG_PREFIX ${CMAKE_INSTALL_PREFIX}) - set (_PKG_CONFIG_EXEC_PREFIX \${prefix}) --set (_PKG_CONFIG_LIBDIR \${exec_prefix}/lib) --set (_PKG_CONFIG_INCLUDEDIR \${prefix}/include) -+set (_PKG_CONFIG_LIBDIR \${exec_prefix}/${CMAKE_INSTALL_LIBDIR}) -+set (_PKG_CONFIG_INCLUDEDIR \${prefix}/${CMAKE_INSTALL_INCLUDEDIR}) - set (_PKG_CONFIG_LIBNAME "${HDF5_LIB_CORENAME}") - set (_PKG_CONFIG_VERSION "${HDF5_PACKAGE_VERSION}") - -@@ -1419,7 +1419,7 @@ - # ) - install ( - DIRECTORY ${HDF5_BINARY_DIR}/hdf5lib_docs/html -- DESTINATION ${HDF5_INSTALL_DATA_DIR} -+ DESTINATION ${HDF5_INSTALL_DOC_DIR} - COMPONENT Documents - ) - diff --git a/sci-libs/hdf5/files/hdf5-1.12.2-cmake_installdirs.patch b/sci-libs/hdf5/files/hdf5-1.12.2-cmake_installdirs.patch deleted file mode 100644 index 6ea7520c0f13..000000000000 --- a/sci-libs/hdf5/files/hdf5-1.12.2-cmake_installdirs.patch +++ /dev/null @@ -1,164 +0,0 @@ -https://github.com/HDFGroup/hdf5/pull/1716 ---- a/CMakeLists.txt -+++ b/CMakeLists.txt -@@ -46,6 +46,13 @@ if (CMAKE_VERSION VERSION_LESS "3.14.0") - endif() - endif () - -+include (GNUInstallDirs) -+set (HDF5_INSTALL_BIN_DIR "${CMAKE_INSTALL_FULL_BINDIR}") -+set (HDF5_INSTALL_DATA_DIR "${CMAKE_INSTALL_FULL_DATADIR}") -+set (HDF5_INSTALL_DOC_DIR "${CMAKE_INSTALL_FULL_DOCDIR}") -+set (HDF5_INSTALL_INCLUDE_DIR "${CMAKE_INSTALL_FULL_INCLUDEDIR}") -+set (HDF5_INSTALL_LIB_DIR "${CMAKE_INSTALL_FULL_LIBDIR}") -+ - #----------------------------------------------------------------------------- - # Instructions for use : Sub-Project Build - # ---- a/c++/src/CMakeLists.txt -+++ b/c++/src/CMakeLists.txt -@@ -173,8 +173,8 @@ endif () - #----------------------------------------------------------------------------- - set (_PKG_CONFIG_PREFIX ${CMAKE_INSTALL_PREFIX}) - set (_PKG_CONFIG_EXEC_PREFIX \${prefix}) --set (_PKG_CONFIG_LIBDIR \${exec_prefix}/lib) --set (_PKG_CONFIG_INCLUDEDIR \${prefix}/include) -+set (_PKG_CONFIG_LIBDIR \${exec_prefix}/${CMAKE_INSTALL_LIBDIR}) -+set (_PKG_CONFIG_INCLUDEDIR \${prefix}/${CMAKE_INSTALL_INCLUDEDIR}) - set (_PKG_CONFIG_LIBNAME "${HDF5_CPP_LIB_CORENAME}") - set (_PKG_CONFIG_VERSION "${HDF5_PACKAGE_VERSION}") - ---- a/doxygen/CMakeLists.txt -+++ b/doxygen/CMakeLists.txt -@@ -36,7 +36,7 @@ if (DOXYGEN_FOUND) - - install ( - DIRECTORY ${HDF5_BINARY_DIR}/hdf5lib_docs/html -- DESTINATION ${HDF5_INSTALL_DATA_DIR} -+ DESTINATION ${HDF5_INSTALL_DOC_DIR} - COMPONENT Documents - ) - ---- a/fortran/src/CMakeLists.txt -+++ b/fortran/src/CMakeLists.txt -@@ -537,8 +537,8 @@ endif () - #----------------------------------------------------------------------------- - set (_PKG_CONFIG_PREFIX ${CMAKE_INSTALL_PREFIX}) - set (_PKG_CONFIG_EXEC_PREFIX \${prefix}) --set (_PKG_CONFIG_LIBDIR \${exec_prefix}/lib) --set (_PKG_CONFIG_INCLUDEDIR \${prefix}/include) -+set (_PKG_CONFIG_LIBDIR \${exec_prefix}/${CMAKE_INSTALL_LIBDIR}) -+set (_PKG_CONFIG_INCLUDEDIR \${prefix}/${CMAKE_INSTALL_INCLUDEDIR}) - set (_PKG_CONFIG_LIBNAME "${HDF5_F90_LIB_CORENAME}") - set (_PKG_CONFIG_VERSION "${HDF5_PACKAGE_VERSION}") - ---- a/hl/c++/src/CMakeLists.txt -+++ b/hl/c++/src/CMakeLists.txt -@@ -91,8 +91,8 @@ endif () - #----------------------------------------------------------------------------- - set (_PKG_CONFIG_PREFIX ${CMAKE_INSTALL_PREFIX}) - set (_PKG_CONFIG_EXEC_PREFIX \${prefix}) --set (_PKG_CONFIG_LIBDIR \${exec_prefix}/lib) --set (_PKG_CONFIG_INCLUDEDIR \${prefix}/include) -+set (_PKG_CONFIG_LIBDIR \${exec_prefix}/${CMAKE_INSTALL_LIBDIR}) -+set (_PKG_CONFIG_INCLUDEDIR \${prefix}/${CMAKE_INSTALL_INCLUDEDIR}) - set (_PKG_CONFIG_LIBNAME "${HDF5_HL_CPP_LIB_CORENAME}") - set (_PKG_CONFIG_VERSION "${HDF5_PACKAGE_VERSION}") - ---- a/hl/fortran/src/CMakeLists.txt -+++ b/hl/fortran/src/CMakeLists.txt -@@ -324,8 +324,8 @@ endif () - #----------------------------------------------------------------------------- - set (_PKG_CONFIG_PREFIX ${CMAKE_INSTALL_PREFIX}) - set (_PKG_CONFIG_EXEC_PREFIX \${prefix}) --set (_PKG_CONFIG_LIBDIR \${exec_prefix}/lib) --set (_PKG_CONFIG_INCLUDEDIR \${prefix}/include) -+set (_PKG_CONFIG_LIBDIR \${exec_prefix}/${CMAKE_INSTALL_LIBDIR}) -+set (_PKG_CONFIG_INCLUDEDIR \${prefix}/${CMAKE_INSTALL_INCLUDEDIR}) - set (_PKG_CONFIG_LIBNAME "${HDF5_HL_F90_LIB_CORENAME}") - set (_PKG_CONFIG_VERSION "${HDF5_PACKAGE_VERSION}") - ---- a/hl/src/CMakeLists.txt -+++ b/hl/src/CMakeLists.txt -@@ -123,8 +123,8 @@ endif () - #----------------------------------------------------------------------------- - set (_PKG_CONFIG_PREFIX ${CMAKE_INSTALL_PREFIX}) - set (_PKG_CONFIG_EXEC_PREFIX \${prefix}) --set (_PKG_CONFIG_LIBDIR \${exec_prefix}/lib) --set (_PKG_CONFIG_INCLUDEDIR \${prefix}/include) -+set (_PKG_CONFIG_LIBDIR \${exec_prefix}/${CMAKE_INSTALL_LIBDIR}) -+set (_PKG_CONFIG_INCLUDEDIR \${prefix}/${CMAKE_INSTALL_INCLUDEDIR}) - set (_PKG_CONFIG_LIBNAME "${HDF5_HL_LIB_CORENAME}") - set (_PKG_CONFIG_VERSION "${HDF5_PACKAGE_VERSION}") - ---- a/src/CMakeLists.txt -+++ b/src/CMakeLists.txt -@@ -1288,8 +1288,8 @@ endif () - #----------------------------------------------------------------------------- - set (_PKG_CONFIG_PREFIX ${CMAKE_INSTALL_PREFIX}) - set (_PKG_CONFIG_EXEC_PREFIX \${prefix}) --set (_PKG_CONFIG_LIBDIR \${exec_prefix}/lib) --set (_PKG_CONFIG_INCLUDEDIR \${prefix}/include) -+set (_PKG_CONFIG_LIBDIR \${exec_prefix}/${CMAKE_INSTALL_LIBDIR}) -+set (_PKG_CONFIG_INCLUDEDIR \${prefix}/${CMAKE_INSTALL_INCLUDEDIR}) - set (_PKG_CONFIG_LIBNAME "${HDF5_LIB_CORENAME}") - set (_PKG_CONFIG_VERSION "${HDF5_PACKAGE_VERSION}") - ---- a/CMakeInstallation.cmake -+++ b/CMakeInstallation.cmake -@@ -31,7 +31,7 @@ if (NOT HDF5_EXTERNALLY_CONFIGURED) - if (HDF5_EXPORTED_TARGETS) - install ( - EXPORT ${HDF5_EXPORTED_TARGETS} -- DESTINATION ${HDF5_INSTALL_CMAKE_DIR} -+ DESTINATION ${HDF5_INSTALL_LIB_DIR}/cmake - FILE ${HDF5_PACKAGE}${HDF_PACKAGE_EXT}-targets.cmake - NAMESPACE ${HDF_PACKAGE_NAMESPACE} - COMPONENT configinstall -@@ -67,12 +67,12 @@ set (HDF5_VERSION_MINOR ${HDF5_PACKAGE_VERSION_MINOR}) - # Configure the hdf5-config.cmake file for the build directory - #----------------------------------------------------------------------------- - set (INCLUDE_INSTALL_DIR ${HDF5_INSTALL_INCLUDE_DIR}) --set (SHARE_INSTALL_DIR "${CMAKE_CURRENT_BINARY_DIR}/${HDF5_INSTALL_CMAKE_DIR}" ) -+set (SHARE_INSTALL_DIR "${CMAKE_CURRENT_BINARY_DIR}/${HDF5_INSTALL_LIB_DIR}/cmake" ) - set (CURRENT_BUILD_DIR "${CMAKE_CURRENT_BINARY_DIR}" ) - configure_package_config_file ( - ${HDF_RESOURCES_DIR}/hdf5-config.cmake.in - "${HDF5_BINARY_DIR}/${HDF5_PACKAGE}${HDF_PACKAGE_EXT}-config.cmake" -- INSTALL_DESTINATION "${HDF5_INSTALL_CMAKE_DIR}" -+ INSTALL_DESTINATION "${HDF5_INSTALL_LIB_DIR}/cmake" - PATH_VARS INCLUDE_INSTALL_DIR SHARE_INSTALL_DIR CURRENT_BUILD_DIR - INSTALL_PREFIX "${CMAKE_CURRENT_BINARY_DIR}" - ) -@@ -81,19 +81,19 @@ configure_package_config_file ( - # Configure the hdf5-config.cmake file for the install directory - #----------------------------------------------------------------------------- - set (INCLUDE_INSTALL_DIR ${HDF5_INSTALL_INCLUDE_DIR}) --set (SHARE_INSTALL_DIR "${CMAKE_INSTALL_PREFIX}/${HDF5_INSTALL_CMAKE_DIR}" ) -+set (SHARE_INSTALL_DIR "${CMAKE_INSTALL_PREFIX}/${HDF5_INSTALL_LIB_DIR}/cmake" ) - set (CURRENT_BUILD_DIR "${CMAKE_INSTALL_PREFIX}" ) - configure_package_config_file ( - ${HDF_RESOURCES_DIR}/hdf5-config.cmake.in - "${HDF5_BINARY_DIR}${CMAKE_FILES_DIRECTORY}/${HDF5_PACKAGE}${HDF_PACKAGE_EXT}-config.cmake" -- INSTALL_DESTINATION "${HDF5_INSTALL_CMAKE_DIR}" -+ INSTALL_DESTINATION "${HDF5_INSTALL_LIB_DIR}/cmake" - PATH_VARS INCLUDE_INSTALL_DIR SHARE_INSTALL_DIR CURRENT_BUILD_DIR - ) - - if (NOT HDF5_EXTERNALLY_CONFIGURED) - install ( - FILES ${HDF5_BINARY_DIR}${CMAKE_FILES_DIRECTORY}/${HDF5_PACKAGE}${HDF_PACKAGE_EXT}-config.cmake -- DESTINATION ${HDF5_INSTALL_CMAKE_DIR} -+ DESTINATION ${HDF5_INSTALL_LIB_DIR}/cmake - COMPONENT configinstall - ) - endif () -@@ -109,7 +109,7 @@ if (NOT HDF5_EXTERNALLY_CONFIGURED) - ) - install ( - FILES ${HDF5_BINARY_DIR}${CMAKE_FILES_DIRECTORY}/${HDF5_PACKAGE}${HDF_PACKAGE_EXT}-config-version.cmake -- DESTINATION ${HDF5_INSTALL_CMAKE_DIR} -+ DESTINATION ${HDF5_INSTALL_LIB_DIR}/cmake - COMPONENT configinstall - ) - endif () diff --git a/sci-libs/hdf5/hdf5-1.10.5.ebuild b/sci-libs/hdf5/hdf5-1.10.5.ebuild deleted file mode 100644 index 1b6770c23e14..000000000000 --- a/sci-libs/hdf5/hdf5-1.10.5.ebuild +++ /dev/null @@ -1,102 +0,0 @@ -# Copyright 1999-2022 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=7 - -FORTRAN_NEEDED=fortran - -inherit autotools fortran-2 flag-o-matic toolchain-funcs prefix - -MY_P=${PN}-${PV/_p/-patch} -MAJOR_P=${PN}-$(ver_cut 1-2) - -DESCRIPTION="General purpose library and file format for storing scientific data" -HOMEPAGE="https://www.hdfgroup.org/HDF5/" -SRC_URI="https://www.hdfgroup.org/ftp/HDF5/releases/${MAJOR_P}/${MY_P}/src/${MY_P}.tar.bz2" - -LICENSE="NCSA-HDF" -SLOT="0/${PV%%_p*}" -KEYWORDS="~alpha amd64 ~arm arm64 ~ia64 ppc ppc64 ~riscv sparc x86 ~amd64-linux ~x86-linux" -IUSE="cxx debug examples fortran +hl mpi szip threads zlib" - -REQUIRED_USE=" - cxx? ( !mpi ) mpi? ( !cxx ) - threads? ( !cxx !mpi !fortran !hl )" - -RDEPEND=" - mpi? ( virtual/mpi[romio] ) - szip? ( virtual/szip ) - zlib? ( sys-libs/zlib:0= )" - -DEPEND="${RDEPEND} - sys-devel/libtool:2 - >=sys-devel/autoconf-2.69" - -S="${WORKDIR}/${MY_P}" - -PATCHES=( - "${FILESDIR}"/${PN}-1.8.9-static_libgfortran.patch - "${FILESDIR}"/${PN}-1.8.9-mpicxx.patch - "${FILESDIR}"/${PN}-1.8.13-no-messing-ldpath.patch -) - -pkg_setup() { - tc-export CXX CC AR # workaround for bug 285148 - use fortran && fortran-2_pkg_setup - - if use mpi; then - if has_version 'sci-libs/hdf5[-mpi]'; then - ewarn "Installing hdf5 with mpi enabled with a previous hdf5 with mpi disabled may fail." - ewarn "Try to uninstall the current hdf5 prior to enabling mpi support." - fi - export CC=mpicc - use fortran && export FC=mpif90 - elif has_version 'sci-libs/hdf5[mpi]'; then - ewarn "Installing hdf5 with mpi disabled while having hdf5 installed with mpi enabled may fail." - ewarn "Try to uninstall the current hdf5 prior to disabling mpi support." - fi -} - -src_prepare() { - # respect gentoo examples directory - sed \ - -e "s:hdf5_examples:doc/${PF}/examples:g" \ - -i $(find . -name Makefile.am) $(find . -name "run*.sh.in") || die - sed \ - -e '/docdir/d' \ - -i config/commence.am || die - if ! use examples; then - sed -e '/^install:/ s/install-examples//' \ - -i Makefile.am || die #409091 - fi - # enable shared libs by default for h5cc config utility - sed -i -e "s/SHLIB:-no/SHLIB:-yes/g" tools/src/misc/h5cc.in || die - hprefixify m4/libtool.m4 - - default - eautomake -} - -src_configure() { - use sparc && tc-is-gcc && append-flags -fno-tree-ccp # bug 686620 - econf \ - --disable-static \ - --enable-deprecated-symbols \ - --enable-build-mode=$(usex debug debug production) \ - $(use_enable cxx) \ - $(use_enable debug codestack) \ - $(use_enable fortran) \ - $(use_enable hl) \ - $(use_enable mpi parallel) \ - $(use_enable threads threadsafe) \ - $(use_with szip szlib) \ - $(use_with threads pthread) \ - $(use_with zlib) -} - -src_install() { - default - - # no static archives - find "${D}" -name '*.la' -delete || die -} diff --git a/sci-libs/hdf5/hdf5-1.12.1-r1.ebuild b/sci-libs/hdf5/hdf5-1.12.1-r1.ebuild deleted file mode 100644 index 32a8891c8155..000000000000 --- a/sci-libs/hdf5/hdf5-1.12.1-r1.ebuild +++ /dev/null @@ -1,128 +0,0 @@ -# Copyright 1999-2022 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=7 - -FORTRAN_NEEDED="fortran" - -inherit cmake flag-o-matic fortran-2 toolchain-funcs - -MY_P="${PN}-${PV/_p/-patch}" -MAJOR_P="${PN}-$(ver_cut 1-2)" - -DESCRIPTION="General purpose library and file format for storing scientific data" -HOMEPAGE="https://www.hdfgroup.org/HDF5/" -SRC_URI="https://www.hdfgroup.org/ftp/HDF5/releases/${MAJOR_P}/${MY_P}/src/${MY_P}.tar.bz2" - -LICENSE="NCSA-HDF" -SLOT="0/${PV%%_p*}" -KEYWORDS="~alpha ~amd64 ~arm ~arm64 ~hppa ~ia64 ~ppc ~ppc64 ~riscv ~s390 ~sparc ~x86 ~amd64-linux ~x86-linux" -IUSE="cxx debug doc examples fortran +hl mpi ros3 szip test threads unsupported zlib" - -REQUIRED_USE=" - !unsupported? ( - mpi? ( !cxx !threads ) - threads? ( !cxx !fortran !hl ) - )" - -RESTRICT="!test? ( test )" - -RDEPEND=" - mpi? ( virtual/mpi[romio] ) - ros3? ( - net-misc/curl - dev-libs/openssl:= - ) - szip? ( virtual/szip ) - zlib? ( sys-libs/zlib:0= ) -" -DEPEND="${RDEPEND}" -BDEPEND="doc? ( - app-doc/doxygen - virtual/latex-base -)" - -PATCHES=( - "${FILESDIR}"/${PN}-1.12.1-cmake_installdirs.patch -) - -S="${WORKDIR}/${MY_P}" - -pkg_setup() { - use fortran && fortran-2_pkg_setup - - if use mpi; then - if has_version 'sci-libs/hdf5[-mpi]'; then - ewarn "Installing hdf5 with mpi enabled with a previous hdf5 with mpi disabled may fail." - ewarn "Try to uninstall the current hdf5 prior to enabling mpi support." - fi - export CC="mpicc" - use fortran && export FC="mpif90" - append-libs -lmpi - elif has_version 'sci-libs/hdf5[mpi]'; then - ewarn "Installing hdf5 with mpi disabled while having hdf5 installed with mpi enabled may fail." - ewarn "Try to uninstall the current hdf5 prior to disabling mpi support." - fi -} - -src_configure() { - use sparc && tc-is-gcc && append-flags -fno-tree-ccp # bug 686620 - local mycmakeargs=( - # Workaround needed to allow build with USE=fortran when an older - # version is installed. See bug #808633 and - # https://github.com/HDFGroup/hdf5/issues/1027 upstream. - -DCMAKE_INCLUDE_DIRECTORIES_PROJECT_BEFORE=ON - -DBUILD_STATIC_LIBS=OFF - -DFETCHCONTENT_FULLY_DISCONNECTED=ON - -DHDF5_BUILD_EXAMPLES=OFF - -DALLOW_UNSUPPORTED=$(usex unsupported) - -DBUILD_TESTING=$(usex test) - -DHDF5_BUILD_CPP_LIB=$(usex cxx) - -DHDF5_BUILD_DOC=$(usex doc) - -DHDF5_BUILD_FORTRAN=$(usex fortran) - -DHDF5_BUILD_HL_LIB=$(usex hl) - -DHDF5_ENABLE_CODESTACK=$(usex debug) - -DHDF5_ENABLE_PARALLEL=$(usex mpi) - -DHDF5_ENABLE_SZIP_ENCODING=$(usex szip) - -DHDF5_ENABLE_SZIP_SUPPORT=$(usex szip) - -DHDF5_ENABLE_THREADSAFE=$(usex threads) - -DHDF5_ENABLE_Z_LIB_SUPPORT=$(usex zlib) - -DHDF5_ENABLE_ROS3_VFD:BOOL=$(usex ros3) - ) - cmake_src_configure -} - -src_install() { - cmake_src_install - - # TODO: generate functioning example runners from their respective - # .in files - as of version 1.12.1 upstream only has it implemented - # for autoconf. - if use examples; then - # These are all useless outside the source tree - rm -f {examples,c++/examples,fortran/examples}/{Makefile*,CMake*} - rm -f hl/{examples,c++/examples,fortran/examples}/{Makefile*,CMake*} - - dodoc -r examples - if use cxx; then - docinto c++ - dodoc -r c++/examples - fi - if use fortran; then - docinto fortran - dodoc -r fortran/examples - fi - if use hl; then - docinto hl - dodoc -r hl/examples - if use cxx; then - docinto hl/c++ - dodoc -r hl/c++/examples - fi - if use fortran; then - docinto hl/fortran - dodoc -r hl/fortran/examples - fi - fi - fi -} diff --git a/sci-libs/hdf5/hdf5-1.12.1.ebuild b/sci-libs/hdf5/hdf5-1.12.1.ebuild deleted file mode 100644 index 8248d6614f5a..000000000000 --- a/sci-libs/hdf5/hdf5-1.12.1.ebuild +++ /dev/null @@ -1,119 +0,0 @@ -# Copyright 1999-2022 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=7 - -FORTRAN_NEEDED="fortran" - -inherit cmake flag-o-matic fortran-2 toolchain-funcs - -MY_P="${PN}-${PV/_p/-patch}" -MAJOR_P="${PN}-$(ver_cut 1-2)" - -DESCRIPTION="General purpose library and file format for storing scientific data" -HOMEPAGE="https://www.hdfgroup.org/HDF5/" -SRC_URI="https://www.hdfgroup.org/ftp/HDF5/releases/${MAJOR_P}/${MY_P}/src/${MY_P}.tar.bz2" - -LICENSE="NCSA-HDF" -SLOT="0/${PV%%_p*}" -KEYWORDS="~alpha ~amd64 ~arm ~arm64 ~hppa ~ia64 ~ppc ~ppc64 ~riscv ~sparc ~x86 ~amd64-linux ~x86-linux" -IUSE="cxx debug doc examples fortran +hl mpi szip test threads unsupported zlib" - -REQUIRED_USE=" - !unsupported? ( - mpi? ( !cxx !threads ) - threads? ( !cxx !fortran !hl ) - )" - -RESTRICT="!test? ( test )" - -RDEPEND=" - mpi? ( virtual/mpi[romio] ) - szip? ( virtual/szip ) - zlib? ( sys-libs/zlib:0= ) -" -DEPEND="${RDEPEND}" -BDEPEND="doc? ( - app-doc/doxygen - virtual/latex-base -)" - -PATCHES=( - "${FILESDIR}"/${PN}-1.12.1-cmake_installdirs.patch -) - -S="${WORKDIR}/${MY_P}" - -pkg_setup() { - use fortran && fortran-2_pkg_setup - - if use mpi; then - if has_version 'sci-libs/hdf5[-mpi]'; then - ewarn "Installing hdf5 with mpi enabled with a previous hdf5 with mpi disabled may fail." - ewarn "Try to uninstall the current hdf5 prior to enabling mpi support." - fi - export CC="mpicc" - use fortran && export FC="mpif90" - append-libs -lmpi - elif has_version 'sci-libs/hdf5[mpi]'; then - ewarn "Installing hdf5 with mpi disabled while having hdf5 installed with mpi enabled may fail." - ewarn "Try to uninstall the current hdf5 prior to disabling mpi support." - fi -} - -src_configure() { - use sparc && tc-is-gcc && append-flags -fno-tree-ccp # bug 686620 - local mycmakeargs=( - -DBUILD_STATIC_LIBS=OFF - -DFETCHCONTENT_FULLY_DISCONNECTED=ON - -DHDF5_BUILD_EXAMPLES=OFF - -DALLOW_UNSUPPORTED=$(usex unsupported) - -DBUILD_TESTING=$(usex test) - -DHDF5_BUILD_CPP_LIB=$(usex cxx) - -DHDF5_BUILD_DOC=$(usex doc) - -DHDF5_BUILD_FORTRAN=$(usex fortran) - -DHDF5_BUILD_HL_LIB=$(usex hl) - -DHDF5_ENABLE_CODESTACK=$(usex debug) - -DHDF5_ENABLE_PARALLEL=$(usex mpi) - -DHDF5_ENABLE_SZIP_ENCODING=$(usex szip) - -DHDF5_ENABLE_SZIP_SUPPORT=$(usex szip) - -DHDF5_ENABLE_THREADSAFE=$(usex threads) - -DHDF5_ENABLE_Z_LIB_SUPPORT=$(usex zlib) - ) - cmake_src_configure -} - -src_install() { - cmake_src_install - - # TODO: generate functioning example runners from their respective - # .in files - as of version 1.12.1 upstream only has it implemented - # for autoconf. - if use examples; then - # These are all useless outside the source tree - rm -f {examples,c++/examples,fortran/examples}/{Makefile*,CMake*} - rm -f hl/{examples,c++/examples,fortran/examples}/{Makefile*,CMake*} - - dodoc -r examples - if use cxx; then - docinto c++ - dodoc -r c++/examples - fi - if use fortran; then - docinto fortran - dodoc -r fortran/examples - fi - if use hl; then - docinto hl - dodoc -r hl/examples - if use cxx; then - docinto hl/c++ - dodoc -r hl/c++/examples - fi - if use fortran; then - docinto hl/fortran - dodoc -r hl/fortran/examples - fi - fi - fi -} diff --git a/sci-libs/hdf5/hdf5-1.12.2-r1.ebuild b/sci-libs/hdf5/hdf5-1.12.2-r1.ebuild deleted file mode 100644 index 325f24396b29..000000000000 --- a/sci-libs/hdf5/hdf5-1.12.2-r1.ebuild +++ /dev/null @@ -1,124 +0,0 @@ -# Copyright 1999-2022 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=7 - -FORTRAN_NEEDED="fortran" - -inherit cmake flag-o-matic fortran-2 toolchain-funcs - -MY_P="${PN}-${PV/_p/-patch}" -MAJOR_P="${PN}-$(ver_cut 1-2)" - -DESCRIPTION="General purpose library and file format for storing scientific data" -HOMEPAGE="https://www.hdfgroup.org/HDF5/" -SRC_URI="https://www.hdfgroup.org/ftp/HDF5/releases/${MAJOR_P}/${MY_P}/src/${MY_P}.tar.bz2" - -LICENSE="NCSA-HDF" -SLOT="0/${PV%%_p*}" -KEYWORDS="~alpha ~amd64 ~arm ~arm64 ~hppa ~ia64 ~ppc ~ppc64 ~riscv ~sparc ~x86 ~amd64-linux ~x86-linux" -IUSE="cxx debug doc examples fortran +hl mpi szip test threads unsupported zlib" - -REQUIRED_USE=" - !unsupported? ( - mpi? ( !cxx !threads ) - threads? ( !cxx !fortran !hl ) - )" - -RESTRICT="!test? ( test )" - -RDEPEND=" - mpi? ( virtual/mpi[romio] ) - szip? ( virtual/szip ) - zlib? ( sys-libs/zlib:0= ) -" -DEPEND="${RDEPEND}" -BDEPEND="doc? ( - app-doc/doxygen - virtual/latex-base -)" - -PATCHES=( - "${FILESDIR}"/${PN}-1.12.2-cmake_installdirs.patch -) - -S="${WORKDIR}/${MY_P}" - -pkg_setup() { - use fortran && fortran-2_pkg_setup - - if use mpi; then - if has_version 'sci-libs/hdf5[-mpi]'; then - ewarn "Installing hdf5 with mpi enabled with a previous hdf5 with mpi disabled may fail." - ewarn "Try to uninstall the current hdf5 prior to enabling mpi support." - fi - export CC="mpicc" - use fortran && export FC="mpif90" - append-libs -lmpi - elif has_version 'sci-libs/hdf5[mpi]'; then - ewarn "Installing hdf5 with mpi disabled while having hdf5 installed with mpi enabled may fail." - ewarn "Try to uninstall the current hdf5 prior to disabling mpi support." - fi -} - -src_configure() { - use sparc && tc-is-gcc && append-flags -fno-tree-ccp # bug 686620 - local mycmakeargs=( - # Workaround needed to allow build with USE=fortran when an older - # version is installed. See bug #808633 and - # https://github.com/HDFGroup/hdf5/issues/1027 upstream. - -DCMAKE_INCLUDE_DIRECTORIES_PROJECT_BEFORE=ON - -DBUILD_STATIC_LIBS=OFF - -DONLY_SHARED_LIBS=ON - -DFETCHCONTENT_FULLY_DISCONNECTED=ON - -DHDF5_BUILD_EXAMPLES=OFF - -DALLOW_UNSUPPORTED=$(usex unsupported) - -DBUILD_TESTING=$(usex test) - -DHDF5_BUILD_CPP_LIB=$(usex cxx) - -DHDF5_BUILD_DOC=$(usex doc) - -DHDF5_BUILD_FORTRAN=$(usex fortran) - -DHDF5_BUILD_HL_LIB=$(usex hl) - -DHDF5_ENABLE_CODESTACK=$(usex debug) - -DHDF5_ENABLE_PARALLEL=$(usex mpi) - -DHDF5_ENABLE_SZIP_ENCODING=$(usex szip) - -DHDF5_ENABLE_SZIP_SUPPORT=$(usex szip) - -DHDF5_ENABLE_THREADSAFE=$(usex threads) - -DHDF5_ENABLE_Z_LIB_SUPPORT=$(usex zlib) - ) - cmake_src_configure -} - -src_install() { - cmake_src_install - - # TODO: generate functioning example runners from their respective - # .in files - as of version 1.12.1 upstream only has it implemented - # for autoconf. - if use examples; then - # These are all useless outside the source tree - rm -f {examples,c++/examples,fortran/examples}/{Makefile*,CMake*} - rm -f hl/{examples,c++/examples,fortran/examples}/{Makefile*,CMake*} - - dodoc -r examples - if use cxx; then - docinto c++ - dodoc -r c++/examples - fi - if use fortran; then - docinto fortran - dodoc -r fortran/examples - fi - if use hl; then - docinto hl - dodoc -r hl/examples - if use cxx; then - docinto hl/c++ - dodoc -r hl/c++/examples - fi - if use fortran; then - docinto hl/fortran - dodoc -r hl/fortran/examples - fi - fi - fi -} diff --git a/sci-libs/hdf5/hdf5-1.12.2-r2.ebuild b/sci-libs/hdf5/hdf5-1.12.2-r2.ebuild deleted file mode 100644 index 12d13c181a04..000000000000 --- a/sci-libs/hdf5/hdf5-1.12.2-r2.ebuild +++ /dev/null @@ -1,125 +0,0 @@ -# Copyright 1999-2022 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=7 - -FORTRAN_NEEDED="fortran" - -inherit cmake flag-o-matic fortran-2 toolchain-funcs - -MY_P="${PN}-${PV/_p/-patch}" -MAJOR_P="${PN}-$(ver_cut 1-2)" - -DESCRIPTION="General purpose library and file format for storing scientific data" -HOMEPAGE="https://www.hdfgroup.org/HDF5/" -SRC_URI="https://www.hdfgroup.org/ftp/HDF5/releases/${MAJOR_P}/${MY_P}/src/${MY_P}.tar.bz2" - -LICENSE="NCSA-HDF" -SLOT="0/${PV%%_p*}" -KEYWORDS="~alpha amd64 arm arm64 ~hppa ~ia64 ppc ppc64 ~riscv ~s390 sparc x86 ~amd64-linux ~x86-linux" -IUSE="cxx debug doc examples fortran +hl mpi szip test threads unsupported zlib" - -REQUIRED_USE=" - !unsupported? ( - mpi? ( !cxx !threads ) - threads? ( !cxx !fortran !hl ) - )" - -RESTRICT="!test? ( test )" - -RDEPEND=" - mpi? ( virtual/mpi[romio] ) - szip? ( virtual/szip ) - zlib? ( sys-libs/zlib:0= ) -" -DEPEND="${RDEPEND}" -BDEPEND="doc? ( - app-doc/doxygen - virtual/latex-base -)" - -PATCHES=( - "${FILESDIR}"/${PN}-1.12.2-cmake_installdirs.patch -) - -S="${WORKDIR}/${MY_P}" - -pkg_setup() { - use fortran && fortran-2_pkg_setup - - if use mpi; then - if has_version 'sci-libs/hdf5[-mpi]'; then - ewarn "Installing hdf5 with mpi enabled with a previous hdf5 with mpi disabled may fail." - ewarn "Try to uninstall the current hdf5 prior to enabling mpi support." - fi - export CC="mpicc" - use fortran && export FC="mpif90" - append-libs -lmpi - elif has_version 'sci-libs/hdf5[mpi]'; then - ewarn "Installing hdf5 with mpi disabled while having hdf5 installed with mpi enabled may fail." - ewarn "Try to uninstall the current hdf5 prior to disabling mpi support." - fi -} - -src_configure() { - use sparc && tc-is-gcc && append-flags -fno-tree-ccp # bug 686620 - local mycmakeargs=( - # Workaround needed to allow build with USE=fortran when an older - # version is installed. See bug #808633 and - # https://github.com/HDFGroup/hdf5/issues/1027 upstream. - -DCMAKE_INCLUDE_DIRECTORIES_PROJECT_BEFORE=ON - -DBUILD_STATIC_LIBS=OFF - -DONLY_SHARED_LIBS=ON - -DFETCHCONTENT_FULLY_DISCONNECTED=ON - -DHDF5_BUILD_EXAMPLES=OFF - -DH5_DEFAULT_PLUGINDIR="${EPREFIX}/usr/$(get_libdir)/hdf5/plugin" - -DALLOW_UNSUPPORTED=$(usex unsupported) - -DBUILD_TESTING=$(usex test) - -DHDF5_BUILD_CPP_LIB=$(usex cxx) - -DHDF5_BUILD_DOC=$(usex doc) - -DHDF5_BUILD_FORTRAN=$(usex fortran) - -DHDF5_BUILD_HL_LIB=$(usex hl) - -DHDF5_ENABLE_CODESTACK=$(usex debug) - -DHDF5_ENABLE_PARALLEL=$(usex mpi) - -DHDF5_ENABLE_SZIP_ENCODING=$(usex szip) - -DHDF5_ENABLE_SZIP_SUPPORT=$(usex szip) - -DHDF5_ENABLE_THREADSAFE=$(usex threads) - -DHDF5_ENABLE_Z_LIB_SUPPORT=$(usex zlib) - ) - cmake_src_configure -} - -src_install() { - cmake_src_install - - # TODO: generate functioning example runners from their respective - # .in files - as of version 1.12.1 upstream only has it implemented - # for autoconf. - if use examples; then - # These are all useless outside the source tree - rm -f {examples,c++/examples,fortran/examples}/{Makefile*,CMake*} - rm -f hl/{examples,c++/examples,fortran/examples}/{Makefile*,CMake*} - - dodoc -r examples - if use cxx; then - docinto c++ - dodoc -r c++/examples - fi - if use fortran; then - docinto fortran - dodoc -r fortran/examples - fi - if use hl; then - docinto hl - dodoc -r hl/examples - if use cxx; then - docinto hl/c++ - dodoc -r hl/c++/examples - fi - if use fortran; then - docinto hl/fortran - dodoc -r hl/fortran/examples - fi - fi - fi -} diff --git a/sci-libs/hdf5/metadata.xml b/sci-libs/hdf5/metadata.xml index 8f7b63aa4610..e36b723f3510 100644 --- a/sci-libs/hdf5/metadata.xml +++ b/sci-libs/hdf5/metadata.xml @@ -13,7 +13,6 @@ Enable high level API (https://support.hdfgroup.org/HDF5/doc/HL/index.html) - Enable support for read-only S3 access (https://portal.hdfgroup.org/display/HDF5/Configuration+and+Setup+for+HDF5+Read+Only+S3+VFD) Enable unsupported combinations of configuration options diff --git a/sci-libs/hipBLAS/Manifest b/sci-libs/hipBLAS/Manifest index 35e24d325900..707e14a5cfef 100644 --- a/sci-libs/hipBLAS/Manifest +++ b/sci-libs/hipBLAS/Manifest @@ -1,7 +1,5 @@ -DIST hipBLAS-4.3.0.tar.gz 428016 BLAKE2B 5a86f7a59aaed9cd6219779546135080f4c583a010f47b902f25545046c50451cd48e570b58c9c3721d735f3ab54295d5eddc61fecc01236e960e37fc87761c8 SHA512 128ee56d6db3d19c83b20fbc315eae8de6ee52aae6c2c5727351bab76c14d9131318cd49a6bcc724f5ec73485783058618bca4dddf96b05cd2f3a772c04f469f DIST hipBLAS-5.0.2.tar.gz 475009 BLAKE2B e7cb123c4ce08a8423f48816fe9248d580df59d089379c3c71eba8725470482cde591254cb2c4af7def390c702fdf6e6ddbe4fda70a6bc4579809c3e00e7d088 SHA512 40bccf8845467d14d614d2eba5482668167fa0488f118e30bbf4cf5fad3aea5e591f89ae2ae63bcb898cff624812d2f94572c18b8ed3d55d4bb254a440790c21 DIST hipBLAS-5.1.3.tar.gz 526704 BLAKE2B d32d7029ea910c341e00dccab1ee9ab984518368cf38524f2264bb808cc1242b3d57db283937650f54460cb01174ec90f02c4bd66866cba4be5d0a1855814f0e SHA512 41dbc86b7ea53e7c0f1d629130f90b719f864ceddae972f1c68911e97b6233286f0c22c0fcfce049ae7db73a1ed41bdaf730040c72f1790fca367362c14ac707 -EBUILD hipBLAS-4.3.0.ebuild 1229 BLAKE2B 2fcb641fbe83945020a84546e240b5b14094985d1afe40c144feebc9423ccbed344f01535a04aaaae53bbabcf97abf68315b2eb90df9b050d8b9e59728828d0b SHA512 f62e7b19d28d908863646492e6732563674fbcf07eb7eae68f32e7316085130b522d7c0665a0eee2074cb9fd08b4adeb166245066bc876693c0d52666dc2b6c4 EBUILD hipBLAS-5.0.2.ebuild 1221 BLAKE2B 3e19f4bd5b50dea3ffedc25533df0ef07df4c7c8c10e0643bebde58112680772ec3a8e7b01baeb9e1418834de242715381f7f9310fc96c22cffddb9506773311 SHA512 ae48ef2bb8aaa9ae7dac477ba72c194b8037d2ae237f83551336c601b6af48c7d98485896326b8b20fc5f533397d86fd52132a092d0bd39b6e06b87b63fe7944 EBUILD hipBLAS-5.1.3.ebuild 1290 BLAKE2B 2d5722359ad1192d245a0d344aa2d3ab794f49be3cf7d6e0e90936d8813c29e7d2b96fb571f0b34aa5cf2883186bf20c5a4e8d974bba148ac20370b032176d1d SHA512 a95a0f8ae694e346aa00d4de3b09938515e8f104e731fa14936dd6f335996c32136d043f326887b8bcde718b5782cb464fc9a23641ea9641492fa21efee4b3a3 MISC metadata.xml 453 BLAKE2B 4c1e76cbc277e93a92a95cda405973cc72863882ab9a6729a07976e7815119e985688387c14fc5017fd6e85aaa64eaa72b900375c7f7428eb6bbb2569c5ecaa6 SHA512 0e42066a5ac8720d1b561bcf23269013d9cceff52a9ddd6a6e0af58c7d2628c335bb290e0dc6c262a0542e286f54fd07cb487dd908343fac5cfca07410df6e56 diff --git a/sci-libs/hipBLAS/hipBLAS-4.3.0.ebuild b/sci-libs/hipBLAS/hipBLAS-4.3.0.ebuild deleted file mode 100644 index 35e198ef1a51..000000000000 --- a/sci-libs/hipBLAS/hipBLAS-4.3.0.ebuild +++ /dev/null @@ -1,42 +0,0 @@ -# Copyright 1999-2022 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=7 - -inherit cmake -DESCRIPTION="ROCm BLAS marshalling library" -HOMEPAGE="https://github.com/ROCmSoftwarePlatform/hipBLAS" -SRC_URI="https://github.com/ROCmSoftwarePlatform/hipBLAS/archive/rocm-${PV}.tar.gz -> ${P}.tar.gz" - -LICENSE="MIT" -KEYWORDS="~amd64" -SLOT="0/$(ver_cut 1-2)" - -RDEPEND="dev-util/hip:${SLOT} - sci-libs/rocBLAS:${SLOT} - sci-libs/rocSOLVER:${SLOT}" -DEPEND="${RDEPEND}" -BDEPEND="" - -S="${WORKDIR}/hipBLAS-rocm-${PV}" - -src_prepare() { - sed -e "s: - $ - $ -- $ -+ $ - ) - - if(BUILD_WITH_LIB STREQUAL "CUDA") -@@ -112,13 +112,13 @@ if( ROCM_FOUND ) - rocm_install_targets( TARGETS hipfft - INCLUDE - ${CMAKE_SOURCE_DIR}/library/include -- ${CMAKE_BINARY_DIR}/include -- PREFIX hipfft ) -+ ${CMAKE_BINARY_DIR}/include ) -+ #PREFIX hipfft ) - rocm_export_targets( TARGETS hip::hipfft -- PREFIX hipfft -+ #PREFIX hipfft - DEPENDS PACKAGE hip - NAMESPACE hip:: ) -- rocm_install_symlink_subdir( hipfft ) -+ #rocm_install_symlink_subdir( hipfft ) - - - # During transition to standalone hipFFT repository, don't install diff --git a/sci-libs/hipFFT/files/hipFFT-4.3.0-remove-git-dependency.patch b/sci-libs/hipFFT/files/hipFFT-4.3.0-remove-git-dependency.patch deleted file mode 100644 index 563da3085ab9..000000000000 --- a/sci-libs/hipFFT/files/hipFFT-4.3.0-remove-git-dependency.patch +++ /dev/null @@ -1,33 +0,0 @@ -diff --color -uprN orig/cmake/dependencies.cmake hipFFT-rocm-4.3.0/cmake/dependencies.cmake ---- orig/cmake/dependencies.cmake 2021-08-26 14:48:57.867272506 +0800 -+++ hipFFT-rocm-4.3.0/cmake/dependencies.cmake 2021-08-26 14:51:02.571273334 +0800 -@@ -21,9 +21,6 @@ - # - # ############################################################################# - --# Git --find_package(Git REQUIRED) -- - # HIP - if(NOT BUILD_WITH_LIB STREQUAL "CUDA") - find_package(hip REQUIRED) -diff --color -uprN orig/CMakeLists.txt hipFFT-rocm-4.3.0/CMakeLists.txt ---- orig/CMakeLists.txt 2021-08-26 14:48:57.867272506 +0800 -+++ hipFFT-rocm-4.3.0/CMakeLists.txt 2021-08-26 14:49:15.247272622 +0800 -@@ -117,16 +117,6 @@ message(STATUS "BUILD_WITH_COMPILER = " - include(cmake/dependencies.cmake) - - if( BUILD_CLIENTS_TESTS ) -- if( GIT_FOUND AND EXISTS "${PROJECT_SOURCE_DIR}/.git" ) -- message(STATUS "rocFFT submodule update") -- execute_process(COMMAND ${GIT_EXECUTABLE} submodule update --init --recursive -- WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} -- RESULT_VARIABLE GIT_SUBMOD_RESULT) -- if( NOT GIT_SUBMOD_RESULT EQUAL "0" ) -- message(FATAL_ERROR "git submodule update --init --recursive failed with ${GIT_SUBMOD_RESULT}, please checkout submodules manually.") -- endif( ) -- endif( ) -- - if( NOT EXISTS "${PROJECT_SOURCE_DIR}/rocFFT/CMakeLists.txt" ) - message(FATAL_ERROR "The rocFFT submodule is not present! Please update git submodules and try again.") - endif( ) diff --git a/sci-libs/hipFFT/hipFFT-4.3.0.ebuild b/sci-libs/hipFFT/hipFFT-4.3.0.ebuild deleted file mode 100644 index 5f7d3a95f58a..000000000000 --- a/sci-libs/hipFFT/hipFFT-4.3.0.ebuild +++ /dev/null @@ -1,75 +0,0 @@ -# Copyright 1999-2021 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=7 - -inherit cmake flag-o-matic - -DESCRIPTION="CU / ROCM agnostic hip FFT implementation" -HOMEPAGE="https://github.com/ROCmSoftwarePlatform/hipFFT" -SRC_URI="https://github.com/ROCmSoftwarePlatform/hipFFT/archive/refs/tags/rocm-${PV}.tar.gz -> hipFFT-rocm-${PV}.tar.gz - test? ( https://github.com/ROCmSoftwarePlatform/rocFFT/archive/rocm-${PV}.tar.gz -> rocFFT-${PV}.tar.gz )" - -LICENSE="MIT" -KEYWORDS="~amd64" -IUSE="benchmark test" -SLOT="0/$(ver_cut 1-2)" - -RESTRICT="!test? ( test )" - -RDEPEND="dev-util/hip:${SLOT} - sci-libs/rocFFT:${SLOT}" -DEPEND="${RDEPEND}" -BDEPEND=" - test? ( - dev-cpp/gtest - dev-libs/boost -)" - -S="${WORKDIR}/hipFFT-rocm-${PV}" - -PATCHES=( - "${FILESDIR}/${PN}-4.3.0-gentoo-install-locations.patch" - "${FILESDIR}/${PN}-4.3.0-remove-git-dependency.patch" - "${FILESDIR}/${PN}-4.3.0-add-complex-header.patch" -) - -src_prepare() { - use test && rmdir rocFFT && ln -s ../rocFFT-rocm-${PV} rocFFT - eapply_user - cmake_src_prepare -} - -src_configure() { - # Grant access to the device - addwrite /dev/kfd - addpredict /dev/dri/ - - local mycmakeargs=( - -DCMAKE_INSTALL_PREFIX="${EPREFIX}/usr" - -DCMAKE_INSTALL_INCLUDEDIR="include/hipfft" - -DCMAKE_SKIP_RPATH=ON - -DBUILD_CLIENTS_TESTS=$(usex test ON OFF) - -DBUILD_CLIENTS_RIDER=$(usex benchmark ON OFF) - ${AMDGPU_TARGETS+-DAMDGPU_TARGETS="${AMDGPU_TARGETS}"} - -D__skip_rocmclang="ON" ## fix cmake-3.21 configuration issue caused by officialy support programming language "HIP" - ) - - cmake_src_configure -} - -src_test () { - addwrite /dev/kfd - addpredict /dev/dri - cd "${BUILD_DIR}/clients/staging" || die - einfo "Running hipfft-test" - LD_LIBRARY_PATH=${BUILD_DIR}/library ./hipfft-test || die -} - -src_install() { - cmake_src_install - if use benchmark; then - cd "${BUILD_DIR}/clients/staging" || die - dobin hipfft-rider - fi -} diff --git a/sci-libs/hipSPARSE/Manifest b/sci-libs/hipSPARSE/Manifest index 0e69cb5010fd..9c36ffc328d1 100644 --- a/sci-libs/hipSPARSE/Manifest +++ b/sci-libs/hipSPARSE/Manifest @@ -1,7 +1,4 @@ -AUX hipSPARSE-4.3.0-remove-matrices-unpacking.patch 3479 BLAKE2B 35974954ad3f2f9c41153f616d870fac18b92034af4993e53c10138db9d8262846e5cb25fabc3fb963a2db4d788ae37ed68719c8b95ab2254c75f43aa3a17f4e SHA512 b495cd0fb1d147ed2d80f2621650a562923737b9409b598ac6aaefa679b2f9aa5285991caee9919e35b3ebdd75b1cfcb583f2c8baa2c018eae334e8522562a33 AUX hipSPARSE-5.0.2-remove-matrices-unpacking.patch 3940 BLAKE2B e3815659b32856206bc3291d09f59514e59dc06c3c33454c24afb68955d6a55411c71535693325be06bdb097e7cedc558ec2b8fa6a2d3886d774d79e038557ad SHA512 39db7d6fe0a085ef5a92f6ec1613376ffd9152d8d31a78f0864c971e7b61d4dfbda2e170940c82dae286d024333621722b249d5bd601399e76e68e8029fc7e81 -DIST hipSPARSE-4.0.tar.gz 271756 BLAKE2B d774632c145a842c5dd97df6e0c1c3b3fc6986a5d3e000564b3b9b4f8a9c72bc01b360baf93a82f8a70a85b8ee1833f4e767a48021d3869391000551ed00e614 SHA512 78c9501e6f9f8b0727d2f2207814048f8c784b2b06797559d6f639244cb1439e9218a46c582a6b337b15791519f0bcb9e0f42c17bff00c096c797c96cc7660ae -DIST hipSPARSE-4.3.tar.gz 349357 BLAKE2B e0da23ba8f39af276842eb9bc45232a0dbe7f40197215397bf2d6ae454061626aedb698701703a03a60487dff2b427d54fa3e0fd36db69fcccf9868d0e5a5097 SHA512 b7302ae4205d5c0e8fd8017e345f7677e55a6ea82741a85f77b2af3f669d63013e12435201f9e0ca4b31d3c4af2cb1630775bf101a69338be2df621d68504d60 DIST hipSPARSE-5.0.tar.gz 440916 BLAKE2B 4011dda3d22b373848735bab0570421fed786bd4d9cff992d3eaaf70b84c00334cec6a8fe3bdd2b9cd5241d837522b778b3462064426195db68930af89c21984 SHA512 567c6b05844143834efbb6f5b7a97ec93f349b97ec6bea55e780cb2480cf80aafbbf15b06f83af3d73ff8ab44c51cbe26ada27b4b398b67dc428c1959c3e7222 DIST hipSPARSE-5.1.tar.gz 449838 BLAKE2B 7727ecb9fa397e2730cfda4c9367188c37ad201d501b50129994869c6ef15b51cdf2d1f481f19f2f37cf0530f1ec3689c40a9651924f70fabe945d80732df64a SHA512 8b01c01a10b8419d14a532ebccfa5b5b5b5c3f6a6e73f3f0ecee58c7e240d2754485a9da020fe4693df3ef9fc08e5bb09b05396472ccbeebf89bc2635d94eb64 DIST rocSPARSE_ASIC_320k.tar.gz 11301444 BLAKE2B a00cc4a3ededab3fb56339319e34e936645ddce2dee3c630153b37e337384c207b0a2829227fb7f4c2db1fe33383e97410ab7ad459d391c025f5410843d51cf2 SHA512 1db3af391c30a371c1ac0087436e266721474273a39d5b2b6d56408d950dcbbee004750e4dce4e3dbc4cb512f38f6d945676d7f29b62c52fd5a7fed0fe789e03 @@ -23,8 +20,6 @@ DIST rocSPARSE_scircuit.tar.gz 8635362 BLAKE2B 3f1d6e35a6a774664bd653dd466fa3c07 DIST rocSPARSE_shipsec1.tar.gz 22175245 BLAKE2B f1d34482b8c3d3ee48033097d7d6f9b648e3c396a5ab2379efdc7de218adec519a235e2e94904f85a4f24c8d4ff15af096ca089379e00db47519023f64b85c16 SHA512 e027097e74f8ffc058339855b1c38cab52c68b661058318b429487e7188e11e907f6734894f9c71d1e38d262986525fba8d0f165bc0a1b4632d7e25be8db4f17 DIST rocSPARSE_sme3Dc.tar.gz 42483568 BLAKE2B f0d16b58f6ea28e67727637697a812a0b10d524c73aeb82f702411b9ebaea3670780e762ed0701aae80c6829e950233f74555523ef2d6c5740b007c7a65c03d4 SHA512 c5a0be2db919a45310a73ea1dd96d0d30168135f887a8c5c3d7ca11e2c3d12ea7d1331be20968d0135bd18da4ef2b043db68eeb7567b6f0f8daf782b87083c3a DIST rocSPARSE_webbase-1M.tar.gz 11360460 BLAKE2B 01b1d06adb5fb32fa402ed888d25a7e52a34779b078fc2e21c60e688d03579bb4ca8694f5ee4a824f7859952d55590a1fd9449dc80d6fe894d7b662b918882d4 SHA512 6401a965b8f6dd5392879956fde3c94f77fe1801a4a43428c03b6d639031575c647eab47b1babe53f4ecc2c3b8fc183e8339536b78dcd0d94ce62bfedd87c161 -EBUILD hipSPARSE-4.0.0-r2.ebuild 1140 BLAKE2B 9344f8e3678a855fca42b5c14fae5d0973ed3f8922836182d9327d1724e92feca6072933df181228ef95cc4993fc8a7797ebf31fac8a5a95eabe8f3de9165ac5 SHA512 e682f1acb67c282c638fd7594b0268a3dc7a33b71fe667f8bd38fc90449660367f94d1964037c0fbe3dd162e5c8a5a4aa941ec72a7353c2f629ed9f07ca06d6b -EBUILD hipSPARSE-4.3.0-r2.ebuild 3709 BLAKE2B eda9d93375d8a3db0da922d615224d27d1e2048c03718c0f77212b09838a3d0627b1dd13025de51bb0779fb99404b1f5b2f65fe1882b26f499dd98b302c99107 SHA512 e11817f8844084bbc129d392c167f9606590a5f23fd35b49bf8586f08ef53616373228524da996ad0539b859619f0384700da423bd1943ef6922c628b6ff0a84 EBUILD hipSPARSE-5.0.2.ebuild 3709 BLAKE2B 57334096115755129d2f97628a7ee0f65eb27b7905a6daa8c01691f8c6e23114fa996437aa5e00b865997d8580d033c3b038dcc75ad07c78b150cfbc34e5cd50 SHA512 96a293fd1643f3d004206573a6ae47ca4450b13ce8e4e93309dee2777f8c1e28032aef98477ca7b4fb26a3a52c0e3b50d8ddeda1fc6f9767a727889b6b9670a6 EBUILD hipSPARSE-5.1.3.ebuild 3493 BLAKE2B b5b00b823b380cd5b85f20e76b75c700ec6195b73ecc995dde2e38f9c4cebf245d2829886fe8e4ee552ccf20ec47035ea81868469d176a0266b3b8725a67e4cb SHA512 463d3096205e813703a3291e2093d5cc34cc233ad13c994357e64d9b5cedc2c217787310ab89cb5bff1a4a73d5de567f98fb03eb1571834cb28ebd55513f54bb MISC metadata.xml 603 BLAKE2B 21c5f53de40b5582b8541e1cef239a4a2eff2eaaaa966a4168439417cd6f80ea00dbd48636bea73aedbaaf580950803768f02ab5f0cca0f76d433d80a80026e1 SHA512 4ff1ebefa7203326a5c2feed7c0deffa10f17383bb4a05fdf3057d8ab1d6f8427a45126ec17aa88e02a93e9114e79f6d89cd4564e72faebf970b7f63814d701a diff --git a/sci-libs/hipSPARSE/files/hipSPARSE-4.3.0-remove-matrices-unpacking.patch b/sci-libs/hipSPARSE/files/hipSPARSE-4.3.0-remove-matrices-unpacking.patch deleted file mode 100644 index 353e98f1d312..000000000000 --- a/sci-libs/hipSPARSE/files/hipSPARSE-4.3.0-remove-matrices-unpacking.patch +++ /dev/null @@ -1,117 +0,0 @@ -diff --color -uprN orig/clients/tests/CMakeLists.txt hipSPARSE-rocm-4.3.0/clients/tests/CMakeLists.txt ---- orig/clients/tests/CMakeLists.txt 2021-08-26 14:08:41.083256475 +0800 -+++ hipSPARSE-rocm-4.3.0/clients/tests/CMakeLists.txt 2021-08-26 14:10:26.491257174 +0800 -@@ -23,113 +23,6 @@ - - find_package(GTest REQUIRED) - --# Download some test matrices --set(TEST_MATRICES -- SNAP/amazon0312 -- Muite/Chebyshev4 -- FEMLAB/sme3Dc -- Williams/webbase-1M -- Bova/rma10 -- JGD_BIBD/bibd_22_8 -- Williams/mac_econ_fwd500 -- Williams/mc2depi -- Hamm/scircuit -- Sandia/ASIC_320k -- GHS_psdef/bmwcra_1 -- HB/nos1 -- HB/nos2 -- HB/nos3 -- HB/nos4 -- HB/nos5 -- HB/nos6 -- HB/nos7 -- DNVS/shipsec1 --) -- --set(TEST_MD5HASH -- f567e5f5029d052e3004bc69bb3f13f5 -- e39879103dafab21f4cf942e0fe42a85 -- a95eee14d980a9cfbbaf5df4a3c64713 -- 2d4c239daad6f12d66a1e6a2af44cbdb -- a899a0c48b9a58d081c52ffd88a84955 -- 455d5b699ea10232bbab5bc002219ae6 -- f1b0e56fbb75d1d6862874e3d7d33060 -- 8c8633eada6455c1784269b213c85ea6 -- 3e62f7ea83914f7e20019aefb2a5176f -- fcfaf8a25c8f49b8d29f138f3c65c08f -- 8a3cf5448a4fe73dcbdb5a16b326715f -- b203f7605cb1f20f83280061068f7ec7 -- b0f812ffcc9469f0bf9be701205522c4 -- f185514062a0eeabe86d2909275fe1dc -- 04b781415202db404733ca0c159acbef -- c98e35f1cfd1ee8177f37bdae155a6e7 -- c39375226aa5c495293003a5f637598f -- 9a6481268847e6cf0d70671f2ff1ddcd -- 73372e7d6a0848f8b19d64a924fab73e --) -- --if(NOT TARGET hipsparse) -- set(CONVERT ${CMAKE_SOURCE_DIR}/../deps/convert) --else() -- set(CONVERT ${CMAKE_SOURCE_DIR}/deps/convert) --endif() -- --list(LENGTH TEST_MATRICES len) --math(EXPR len1 "${len} - 1") -- --foreach(i RANGE 0 ${len1}) -- list(GET TEST_MATRICES ${i} m) -- list(GET TEST_MD5HASH ${i} md5) -- -- string(REPLACE "/" ";" sep_m ${m}) -- list(GET sep_m 0 dir) -- list(GET sep_m 1 mat) -- -- # Download test matrices if not already downloaded -- set(CMAKE_MATRICES_DIR ${PROJECT_BINARY_DIR}/matrices) -- if(NOT EXISTS "${CMAKE_MATRICES_DIR}/${mat}.bin") -- message("-- Downloading and extracting test matrix ${m}.tar.gz") -- file(DOWNLOAD https://sparse.tamu.edu/MM/${m}.tar.gz ${CMAKE_MATRICES_DIR}/${mat}.tar.gz -- INACTIVITY_TIMEOUT 3 -- STATUS DL) -- -- list(GET DL 0 stat) -- list(GET DL 1 msg) -- -- if(NOT stat EQUAL 0) -- message("-- Timeout has been reached, trying mirror ...") -- # Try again using ufl links -- file(DOWNLOAD https://www.cise.ufl.edu/research/sparse/MM/${m}.tar.gz ${CMAKE_MATRICES_DIR}/${mat}.tar.gz -- INACTIVITY_TIMEOUT 3 -- STATUS DL) -- -- list(GET DL 0 stat) -- list(GET DL 1 msg) -- -- if(NOT stat EQUAL 0) -- message(FATAL_ERROR "${msg}") -- endif() -- endif() -- -- # Check MD5 hash before continuing -- file(MD5 ${CMAKE_MATRICES_DIR}/${mat}.tar.gz hash) -- -- # Compare hash -- if(NOT hash STREQUAL md5) -- message(FATAL_ERROR "${mat}.tar.gz is corrupted") -- endif() -- -- execute_process(COMMAND tar xf ${mat}.tar.gz -- WORKING_DIRECTORY ${CMAKE_MATRICES_DIR}) -- execute_process(COMMAND mv ${mat}/${mat}.mtx . -- WORKING_DIRECTORY ${CMAKE_MATRICES_DIR}) -- execute_process(COMMAND ${CONVERT} ${mat}.mtx ${mat}.bin -- WORKING_DIRECTORY ${CMAKE_MATRICES_DIR}) -- execute_process(COMMAND rm ${mat}.tar.gz ${mat} ${mat}.mtx -rf -- WORKING_DIRECTORY ${CMAKE_MATRICES_DIR}) -- endif() --endforeach() -- - set(HIPSPARSE_TEST_SOURCES - hipsparse_gtest_main.cpp - test_axpyi.cpp diff --git a/sci-libs/hipSPARSE/hipSPARSE-4.0.0-r2.ebuild b/sci-libs/hipSPARSE/hipSPARSE-4.0.0-r2.ebuild deleted file mode 100644 index 83afe36617b3..000000000000 --- a/sci-libs/hipSPARSE/hipSPARSE-4.0.0-r2.ebuild +++ /dev/null @@ -1,49 +0,0 @@ -# Copyright 1999-2021 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=7 - -inherit cmake - -DESCRIPTION="ROCm SPARSE marshalling library" -HOMEPAGE="https://github.com/ROCmSoftwarePlatform/hipSPARSE" -SRC_URI="https://github.com/ROCmSoftwarePlatform/hipSPARSE/archive/rocm-${PV}.tar.gz -> hipSPARSE-$(ver_cut 1-2).tar.gz" - -LICENSE="MIT" -KEYWORDS="~amd64" -SLOT="0" - -RDEPEND=">=dev-util/rocminfo-$(ver_cut 1-2) - =dev-util/hip-$(ver_cut 1-2)* - =sci-libs/rocSPARSE-${PV}*" -DEPEND="${RDEPEND}" - -S="${WORKDIR}/hipSPARSE-rocm-${PV}" - -src_prepare() { - sed -e "s/PREFIX hipsparse//" \ - -e "/ [${current_blas}]." - else - elog "Current eselect: BLAS ($libdir) -> [${current_blas}]." - elog "To use blas [${me}] implementation, you have to issue (as root):" - elog "\t eselect blas set ${libdir} ${me}" - fi - - # check eselect-lapack - eselect lapack add ${libdir} "${EROOT}"/usr/${libdir}/lapack/${me} ${me} - local current_lapack=$(eselect lapack show ${libdir} | cut -d' ' -f2) - if [[ ${current_lapack} == ${me} || -z ${current_lapack} ]]; then - eselect lapack set ${libdir} ${me} - elog "Current eselect: LAPACK ($libdir) -> [${current_lapack}]." - else - elog "Current eselect: LAPACK ($libdir) -> [${current_lapack}]." - elog "To use lapack [${me}] implementation, you have to issue (as root):" - elog "\t eselect lapack set ${libdir} ${me}" - fi -} - -pkg_postrm() { - use eselect-ldso || return - - eselect blas validate - eselect lapack validate -} diff --git a/sci-libs/libaec/Manifest b/sci-libs/libaec/Manifest index 2df002e0f4e7..ff4e031063bb 100644 --- a/sci-libs/libaec/Manifest +++ b/sci-libs/libaec/Manifest @@ -1,5 +1,3 @@ -DIST libaec-1.0.4.tar.gz 2775768 BLAKE2B e083c5e268296227b5193c2192f7c52d47f8cef08823de013453ffd2c5f8c115921a79c60286e7582cbfcbb914c5e8ad4c2493e4ec89395df3be2206bc893591 SHA512 74d01208ad3a426d68895dbfa8a830c96618a219f27745ecfd94b248462748e772c266e7fb0d4e4f4c75f8953a97f835fb2ece67317cf9e9a7495360362d22eb DIST libaec-1.0.6.tar.gz 2777547 BLAKE2B 20da3fdf659c9d47ffde442ceaa9f9a831aab70330e27683ed4b62a28fdad02ec9c100413580f04d5a2bbbe86f3fe54b065230393bfb5e7746c522cce71513bc SHA512 f5d118c48225f97b229ac11425b94adff4d3698733bf18767b427e49047f8e08768464bc9cd9f5e6a66ceb44c8ebd9904c4f6f46566e2e66fcaa1049b2ebfcc1 -EBUILD libaec-1.0.4.ebuild 752 BLAKE2B 69a347bf06cf69874142484f14037de94bf358bc6969616cfe707721df850f43336bc6ee5cb4045420c39f79293043daa62d08684cb899f3f5b83cdac32c56d8 SHA512 37fc7ee6489b05edc05f63636ff8e65be8f417f0dbc57bc94940fa80835800a908527c4986b51e90bcd01557ec60688fd85630574159f8de4ff34229068e3c63 EBUILD libaec-1.0.6.ebuild 1080 BLAKE2B bbd78e6d834a3c518d76b05a8808c607b53e43ed3d524c95ec59cf06178f7ec5dba0582f5bfe097f9a8c9cccf7a6e7d8f73235aeac9c70df4104da64d89190f1 SHA512 d7d3ccfb4e76e1ece243fef304280af11e386e0c9ecfe28830c1aaa383229e281a84285d60b0f1f0c3d86a6e53e5b2b0cc1e2f88e14e1206fbd2b69b1d24bf68 MISC metadata.xml 720 BLAKE2B 08fdb1266842d4855449e2b444beea95e1bddac8b4501a85ec79b1aa40d4838d3d0140b48a0fd366ce588a55873a986483c0ba3216eb5609fb4c4c13da205eb3 SHA512 ffae51194154bcd13ef917b2e16fd9a49725ed163f742d67715a2b1c350bcc3a2bbb9e9ef788fa9e776ae4361911a8954fd56e03adcd59c54e83a64d5b41a0fe diff --git a/sci-libs/libaec/libaec-1.0.4.ebuild b/sci-libs/libaec/libaec-1.0.4.ebuild deleted file mode 100644 index 67a349d6b185..000000000000 --- a/sci-libs/libaec/libaec-1.0.4.ebuild +++ /dev/null @@ -1,30 +0,0 @@ -# Copyright 1999-2021 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=7 - -inherit cmake - -MY_P="${PN}-v${PV}" -DESCRIPTION="Adaptive Entropy Coding library" -HOMEPAGE="https://gitlab.dkrz.de/k202009/libaec" -SRC_URI="https://gitlab.dkrz.de/k202009/libaec/-/archive/v${PV}/${MY_P}.tar.gz -> ${P}.tar.gz" -S="${WORKDIR}/${MY_P}" - -LICENSE="BSD-2" -SLOT="0/2" -KEYWORDS="amd64 arm arm64 ~riscv x86 ~amd64-linux ~x86-linux" -IUSE="+szip" - -RDEPEND="szip? ( !sci-libs/szip )" - -src_install() { - cmake_src_install - - # avoid conflict with szip (easier than to patch) - if ! use szip; then - rm "${ED}"/usr/include/szlib.h || die - rm "${ED}"/usr/$(get_libdir)/libsz* || die - rm "${ED}"/usr/share/doc/${PF}/README.SZIP || die - fi -} diff --git a/sci-libs/liborigin/Manifest b/sci-libs/liborigin/Manifest index f8a02dc7a848..0166bc5cad5e 100644 --- a/sci-libs/liborigin/Manifest +++ b/sci-libs/liborigin/Manifest @@ -1,8 +1,5 @@ -AUX liborigin-3.0.1-buildsystem.patch 1479 BLAKE2B 3a199d9c15031a692ce6c1148e13db0fae713105e872fad3da1354263869d4363362e37ce40e0b62f635c2d2ec51514dcff0f02acc1484ffaf07a741d73bb2e6 SHA512 f9e6c3fabf45b422482349fc113a7e86846ef78550b91779dd5108b7dd04a8b0cad3aab7f24b6cee209a4c540ed2cac5e676cf01586056d1fa20965e98e054c9 AUX liborigin-3.0.1-missing-header.patch 624 BLAKE2B 22444e21cfd17a7e32531cad8715cb7de9fbc7ead88de560ffdd62da9321e3666d1107da07cd0cf2aea6799241a34a3b8b567de577ba6120c60f0dc9b0eb021f SHA512 598988e0da6bc26dd845b86ca5251f5f88221f74b68487e500afa91979340807cd278e8365d5039d9720c56ee37f3e65305328bfa8346689dad5c338e0004120 AUX liborigin-3.0.1_p20210828-buildsystem.patch 2399 BLAKE2B 18f07680ade0fefa0c171776b6c8dbb1f36f07444cb0a1722901267b34715b2ca7a7f99a401e8fa3eea18b9160ee16cb7f456de5a3ff3d4c83a5fd52dcee3da3 SHA512 65da6f055f1766cd126eb53065e586e43057b0127500ba75035ab5e8ec31a2fec4910bf84aab8b389fba473c9a94b4500297bc4c0826b40323579ad1b707d171 -DIST liborigin-3.0.1.tar.gz 156842 BLAKE2B 2c88d0419c4c7be1ff6d3aaba1f794fe67174e02e591878c754a32d9b2789bd8594d39f4786d9ac04884b443b528086617a9e1fdbca8815089c8ebb400dd321c SHA512 c3fde3549bce462ea38b961885d6c835aac53db64375645db1d3636eb78396b3353c5bcc9ea3313dac3ffb436de35677ecec6fddb2fcf1eb37eaf6a78e2a31f8 DIST liborigin-3.0.1_p20210828.tar.gz 156437 BLAKE2B 48713d8854ccd7f46b1aca72bf7b7739af588f08aea32e1d27ff4416ca4fa96a942b19e37fb151f5e7afbd5133d870c305a608e639c620672e683fe805d4f5d1 SHA512 0c9866bef16844102be6ae6e150c927420ca07e6ee50342e9fbd4312f9cd3c476c8d730464b010076f31d7fdcc16bd1133de9ace3a6e5b9b321a231ddab00458 -EBUILD liborigin-3.0.1.ebuild 1174 BLAKE2B 12d27c9ef6740b63b7ad115d3c3cbc685fbc208987eb127f45195543618cd3c26d903c73fd1d2f6600e4304b8f71a27314a1b6927cabb64af7433518f8c3298b SHA512 dfc54d056c43d4b8c5c7be4f1c26a59c6b7890ed44da3d154af4d3e4ea9c59704c74d905e8f4a7f95fd04c461f1e3bae00de5e220b1503f2dc02d147c2cddc0c EBUILD liborigin-3.0.1_p20210828-r1.ebuild 1261 BLAKE2B e6866804dc11d372b0d60f2b06f7a399ba4df59034013122c747bd3ea9c22bf6ffb21541ea9de34c2cd22d490166943f2104792985ddc8df5c8382e074989a4d SHA512 fcd595e5f173a915743ce0bb9423a1b9efaeca49081488b227c4277007dc11caef3ef2c8fde9368e0ffc9a23b59b3e94ee8805f4c3866d836ba0e74e0c8c3db5 MISC metadata.xml 468 BLAKE2B 22310aca9009a66cdbb320d062e2658beeaa39de6d5b09070e48a7eb03848df03dea83e254c78fb60f1dd067b66f2f6d8085253172cc8e70617e68f88bfaf0ca SHA512 7cee5f9738b23031f760e9090bf6368f06070b7600f1ffdd829e987ad862b03d2147045b26550933583ea797825d1ac5674bd1e4426fc734e16c7251cc27f397 diff --git a/sci-libs/liborigin/files/liborigin-3.0.1-buildsystem.patch b/sci-libs/liborigin/files/liborigin-3.0.1-buildsystem.patch deleted file mode 100644 index 36e5d7fc7a9c..000000000000 --- a/sci-libs/liborigin/files/liborigin-3.0.1-buildsystem.patch +++ /dev/null @@ -1,47 +0,0 @@ -diff --git a/CMakeLists.txt b/CMakeLists.txt -index 2f3b26d..4c543bf 100644 ---- a/CMakeLists.txt -+++ b/CMakeLists.txt -@@ -28,6 +28,8 @@ else() - set( CMAKE_C_FLAGS "${CMAKE_C_FLAGS} -Wall -Wextra -pedantic" ) - endif() - -+option(ENABLE_TOOLS "Install opj2dat command line util" ON) -+ - # compile-time configuration variables to be linked in - configure_file(config.h.in ${CMAKE_CURRENT_BINARY_DIR}/config.h) - include_directories(${CMAKE_CURRENT_BINARY_DIR}) -@@ -44,7 +46,6 @@ set (devel-headers - OriginObj.h - OriginFile.h - OriginParser.h -- tree.hh - ) - - # object library -@@ -87,6 +88,7 @@ if (BUILD_SHARED_LIBS) - endif () - - # command line util -+if(ENABLE_TOOLS) - if (BUILD_STATIC_LIBS) - add_executable(opj2dat opj2dat.cpp) - target_link_libraries (opj2dat origin_static) -@@ -94,6 +96,7 @@ elseif (BUILD_SHARED_LIBS) - add_executable(opj2dat opj2dat.cpp) - target_link_libraries (opj2dat origin_shared) - endif () -+endif () - - # Generate a pkg-config file matching this config - configure_file("liborigin.pc.in" "liborigin.pc" @ONLY) -@@ -103,7 +106,9 @@ install(FILES ${devel-headers} DESTINATION ${CMAKE_INSTALL_INCLUDEDIR}/liborigin - # install pkg-config file - if (BUILD_STATIC_LIBS OR BUILD_SHARED_LIBS) - install(FILES ${CMAKE_CURRENT_BINARY_DIR}/liborigin.pc DESTINATION ${CMAKE_INSTALL_LIBDIR}/pkgconfig) -+ if(ENABLE_TOOLS) - install(TARGETS opj2dat DESTINATION ${CMAKE_INSTALL_BINDIR} OPTIONAL) -+ endif () - endif () - - # documentation diff --git a/sci-libs/liborigin/liborigin-3.0.1.ebuild b/sci-libs/liborigin/liborigin-3.0.1.ebuild deleted file mode 100644 index c7fb5af70c2b..000000000000 --- a/sci-libs/liborigin/liborigin-3.0.1.ebuild +++ /dev/null @@ -1,53 +0,0 @@ -# Copyright 1999-2021 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=7 - -inherit cmake - -DESCRIPTION="Library for reading OriginLab OPJ project files" -HOMEPAGE="https://sourceforge.net/projects/liborigin/ https://github.com/SciDAVis/liborigin/" -SRC_URI="http://downloads.sourceforge.net/liborigin/${P}.tar.gz" - -LICENSE="GPL-3" -SLOT="2" -KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" -IUSE="debug doc tools" - -BDEPEND=" - doc? ( app-doc/doxygen ) -" -RDEPEND=" - dev-cpp/tree -" -DEPEND="${RDEPEND}" - -PATCHES=( - # add missing header - "${FILESDIR}/${P}-missing-header.patch" - # downstream - "${FILESDIR}/${P}-buildsystem.patch" # ENABLE_TOOLS, shared link, doc paths -) - -src_prepare() { - cmake_src_prepare - rm tree.hh || die "failed to remove bundled tree.hh" - - sed -e "/install.*html/s/liborigin/${PF}/" \ - -i CMakeLists.txt || die "failed to fix htmldoc install path" -} - -src_configure() { - local mycmakeargs=( - -DGENERATE_CODE_FOR_LOG=$(usex debug) - $(cmake_use_find_package doc Doxygen) - -DENABLE_TOOLS=$(usex tools) - -DBUILD_STATIC_LIBS=NO - ) - cmake_src_configure -} - -src_compile() { - cmake_src_compile - use doc && cmake_src_compile doc -} diff --git a/sci-libs/netcdf/Manifest b/sci-libs/netcdf/Manifest index 1a4945ea5f51..f1e21fd0ea1e 100644 --- a/sci-libs/netcdf/Manifest +++ b/sci-libs/netcdf/Manifest @@ -1,11 +1,8 @@ -AUX netcdf-4.7.4-big-endian-build.patch 1892 BLAKE2B 9209f042f86e4eb7d3c1359ff8c1c033eab2762aa6bf5b7a8f8e513ac52eddb2039c1728d77a2e038985a8612a04ba5654d27c872f92bcd54dde4237dc427288 SHA512 5d6cf04597897faed7ecdd4c8c182f3d22082569cbb726b25d8e922c853dbe4e7e8105c9470faaed50e254072f9411ebfc9aabc480858a0bd7fd8d77a9a2e87c AUX netcdf-4.7.4-big-endian-test.patch 689 BLAKE2B ab28269ee5922816e7ef7834dddec974c98951a41c0025041f9ee67d92c7bfe57887f5ac8d8beb2426e2c095fc06cf4b29046a9b29873b125d681b169c9613b6 SHA512 72575f890615a05a6f1beeebfd3edcd367fe148be017a32847b0a7db96c594e6bb5d01acd865257b25410e0a22699b1beef2c54748ccb09ea5e41009f4e0f9ee AUX netcdf-4.8.1-big-endian-build.patch 690 BLAKE2B ee79d940d47b69c7628d325b8a4b002942d7198d0a98b7d64a843056f2b0ac8888c9bd6cf37f74f5788a1b075a309c60a9e80a1e072dd1ff45cf3213ad7ffe4d SHA512 e2dcf92063806e56ec02df8a3b2dea97b67ee58768703db2672188d9837188f7bab68a04da2df78b6130c6d87137f8b9974b91d09eab8cd90dba77aadac6ea5e AUX netcdf-4.9.0-fix-musl-execinfo_h.patch 1098 BLAKE2B 3c063fbf452e045b96b411ce1810ea0d535a66f90d421412c9994313303d31b3d4be3377727a0182bac27eb5cb6e675bd3007090d2a94b13dc23a1a1bc252a12 SHA512 aae74f9bef1ec09ac3a488a1305a812b18aeaec6028d57e45f667727f36421676dc20d6f9589284c7b5dbb0957c23ac426ac3ca2f05a10e1b4d6de26851405e4 -DIST netcdf-4.7.4.tar.gz 19711158 BLAKE2B b49532e6f87b458e7f5654f70ec932d6c8c81272c97ce44df3d27bb61b01d3e005f918b959ce12e42e26f7c12309ab72eeb57a35216d20ab5761837db65741a4 SHA512 15922818fdd71be285eb7dd2fc9be2594fe9af979de3ed316465636c7bbdaec65eb151ca57ef8b703e6a360cdba036b8f9bc193ddff01ff7ce4214c0a66efa79 DIST netcdf-4.8.1.tar.gz 18957280 BLAKE2B 05fc6cd10cb5cbb11dc077b9a884fbc63c4cb840b241e782702da58ad9831fba065a6f1e97c2be092437735d39658482285850a00618d0582d6e4728d64c4402 SHA512 c97207867abf10d414abf34624268710f5b812c26c38f97e73afe00558b3f07917331fbc7fdb9e70b09813acf15a9a09bae2c432a3266ce10a791b9472f87a42 DIST netcdf-4.9.0.tar.gz 19491744 BLAKE2B b669f7ccb2f7a8def9d5b944a97d101ea7b7307d6e1495a97c0966b4ac9722b404d6039dee192da759d14d52259be2ff4f49be3bfb6cbbfac48732684cbff9c3 SHA512 62cb593b99a6e9c56426175d141907572d3974de8dc39549c85337acf410539f9b7dcd9a375808e271da1d0dc93fce7586b955eddd2bb45901d9cc48a72db705 -EBUILD netcdf-4.7.4.ebuild 1703 BLAKE2B 33294c879140f07bce3943cf77ec41b36045dd9df219d0cf1f3784a683b6392a6c3adb5561c6b2f18048379580fd28c6782bea986a5b5f422c5ec103a7c64b13 SHA512 7d6ea028a446b4f0d8a5cfd8b22c15f582722ae3f6f839c28a42e3a45ed9ed7952ff8c3bd5b43471c02ba237d06707d8cba8399e489eb1cb1849a9fa7f3f39d8 EBUILD netcdf-4.8.1-r1.ebuild 1810 BLAKE2B e73bab3d4748a0e509f5f6bfeae90ac10250744e3cff0bd588b9337a340c177c97cbb424f7880a5285026b997ec378631933979cfe9b4694d41e4244aabf9bb4 SHA512 aae2f847567d803b175ce97a529763f4e1c74e7a5b65fd85ec235b2451ce02c7afabaac2a90bb4904f8068f822ffac5329fefd5108d396788d36bda6968380c3 EBUILD netcdf-4.8.1-r2.ebuild 2005 BLAKE2B 27ddd0dfc01e7ba32d889efb9085c9b16f4cdd076e860c2734ad78397d562c3eb2e1a231449983b5817968efe211ced789f0624d621d257c565ca362a02b1a3d SHA512 3672c96fca8d1d60f1757192d4d39cb0d0a5f57fe8e102de1a4bfc16449c478ae9c7fb2aeb42b669241c269d9dbd1cdba6712cfbcd52d595cc7bbdf733b0eedd EBUILD netcdf-4.9.0.ebuild 1851 BLAKE2B d6378eebacee1769d6f99b9702ed9a18b1295fc99554b66d3d61e8b40e1d4a1dd973efea929491f69be3fe4b5cf897220541df78f2c81dd87c5415beb3ce9590 SHA512 c3edd8b82bb64e85c6b649b80c4a0ae7621e9ad05063dbfb5a79cf4c93f4c954b54464840c32a296126857cae521c65d805aa7b65423acefd6b762253c32a75a diff --git a/sci-libs/netcdf/files/netcdf-4.7.4-big-endian-build.patch b/sci-libs/netcdf/files/netcdf-4.7.4-big-endian-build.patch deleted file mode 100644 index edad05a21e64..000000000000 --- a/sci-libs/netcdf/files/netcdf-4.7.4-big-endian-build.patch +++ /dev/null @@ -1,63 +0,0 @@ -https://github.com/DennisHeimbigner/netcdf-c/commit/6f86660da86f279cad1f2804cf3242767de27630.patch -https://github.com/Unidata/netcdf-c/issues/1687 -https://bugs.gentoo.org/772863 - -From 6f86660da86f279cad1f2804cf3242767de27630 Mon Sep 17 00:00:00 2001 -From: Dennis Heimbigner -Date: Fri, 3 Apr 2020 20:15:34 -0600 -Subject: [PATCH] Fix missing forward declarations - -re: issue https://github.com/Unidata/netcdf-c/issues/1687 - -static functions are being used before decl and it causes -errors. Only occurs when BIG_ENDIAN is defined. -Solution is to add the forward declarations. ---- - libdispatch/dfilter.c | 4 ++++ - nc_test4/tst_filterparser.c | 5 +++++ - plugins/H5Zutil.c | 1 + - 3 files changed, 10 insertions(+) - -diff --git a/libdispatch/dfilter.c b/libdispatch/dfilter.c -index 893846457..0e490a3d6 100644 ---- a/libdispatch/dfilter.c -+++ b/libdispatch/dfilter.c -@@ -40,6 +40,10 @@ Unified filter related code - - /* Forward */ - static int gettype(const int q0, const int q1, int* unsignedp); -+#ifdef WORDS_BIGENDIAN -+static void byteswap8(unsigned char* mem); -+static void byteswap4(unsigned char* mem); -+#endif - - const struct LegalFormat { - const char* tag; -diff --git a/nc_test4/tst_filterparser.c b/nc_test4/tst_filterparser.c -index 7d02f2bc7..b32094a25 100644 ---- a/nc_test4/tst_filterparser.c -+++ b/nc_test4/tst_filterparser.c -@@ -122,6 +122,11 @@ static const char* spectype[] = {"i", "b", "ub", "s", "us", "i", "ui", "i", "i", - - static int nerrs = 0; - -+#ifdef WORDS_BIGENDIAN -+static void byteswap8(unsigned char* mem); -+static void byteswap4(unsigned char* mem); -+#endif -+ - static void - mismatch(size_t i, unsigned int *params, const char* tag) - { -diff --git a/plugins/H5Zutil.c b/plugins/H5Zutil.c -index cb36dc96c..86dfb0cfa 100644 ---- a/plugins/H5Zutil.c -+++ b/plugins/H5Zutil.c -@@ -4,6 +4,7 @@ - */ - - -+#include "config.h" - #include - - /* diff --git a/sci-libs/netcdf/netcdf-4.7.4.ebuild b/sci-libs/netcdf/netcdf-4.7.4.ebuild deleted file mode 100644 index 793ea43ad586..000000000000 --- a/sci-libs/netcdf/netcdf-4.7.4.ebuild +++ /dev/null @@ -1,74 +0,0 @@ -# Copyright 1999-2021 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=7 - -inherit cmake flag-o-matic - -DESCRIPTION="Scientific library and interface for array oriented data access" -HOMEPAGE="https://www.unidata.ucar.edu/software/netcdf/" -SRC_URI="https://github.com/Unidata/netcdf-c/archive/v${PV}.tar.gz -> ${P}.tar.gz" -S="${WORKDIR}/${PN}-c-${PV}" - -LICENSE="UCAR-Unidata" -SLOT="0/18" -KEYWORDS="amd64 ~arm ~arm64 ~ia64 ppc ppc64 -riscv x86 ~amd64-linux ~x86-linux" -IUSE="+dap doc examples hdf +hdf5 mpi szip test tools" -RESTRICT="!test? ( test )" - -RDEPEND=" - dap? ( net-misc/curl:0= ) - hdf? ( - sci-libs/hdf:0= - sci-libs/hdf5:0= - virtual/jpeg - ) - hdf5? ( sci-libs/hdf5:0=[hl(+),mpi=,szip=,zlib] )" -DEPEND="${RDEPEND}" -BDEPEND=" - doc? ( app-doc/doxygen[dot] ) - virtual/pkgconfig" - -REQUIRED_USE=" - test? ( tools ) - szip? ( hdf5 ) - mpi? ( hdf5 )" - -PATCHES=( - "${FILESDIR}/${PN}-4.7.4-big-endian-build.patch" - "${FILESDIR}/${PN}-4.7.4-big-endian-test.patch" -) - -src_prepare() { - # skip test that requires network - sed -i -e '/run_get_hdf4_files/d' hdf4_test/CMakeLists.txt || die - - cmake_src_prepare -} - -src_configure() { - use mpi && export CC=mpicc - - # Temporary workaround for test breakage - # https://github.com/Unidata/netcdf-c/issues/1983 - # bug #827042 - append-flags -fno-strict-aliasing - - local mycmakeargs=( - -DENABLE_DAP_REMOTE_TESTS=OFF - -DBUILD_UTILITIES=$(usex tools) - -DENABLE_DAP=$(usex dap) - -DENABLE_DOXYGEN=$(usex doc) - -DENABLE_EXAMPLES=$(usex examples) - -DENABLE_HDF4=$(usex hdf) - -DENABLE_NETCDF_4=$(usex hdf5) - -DENABLE_TESTS=$(usex test) - ) - - cmake_src_configure -} - -src_test() { - # fails parallel tests: bug #621486 - cmake_src_test -j1 -} diff --git a/sci-libs/rocBLAS/Manifest b/sci-libs/rocBLAS/Manifest index 5b65987bb854..633d780e3cb2 100644 --- a/sci-libs/rocBLAS/Manifest +++ b/sci-libs/rocBLAS/Manifest @@ -1,21 +1,13 @@ AUX Tensile-4.3.0-hsaco-compile-specified-arch.patch 3859 BLAKE2B 4590978cff0fdb0501ba2405615775cb3f8900ce164c3d57cc59dfe82e1adc25376b6463855a045f5e0652cc985b0015566b95ff28327c59f2db875a84cb49b3 SHA512 57520f1d46f46c7cfd5b8c3ae307da07695c19479b687ce994ad9fba2e755ed7c776c3d8bee8e0642c7613a5d53d8469f329b1eb07563c13d2f7bda8b3d36687 AUX Tensile-4.3.0-output-commands.patch 1629 BLAKE2B c43395d8e8aeb956d5eb84c8a34ad4b995ed32499ceababeb22d5ca3ac5ee6e8ef353a1467a77943a441f0840b9a6ad1f53202ec8673ef3753aa2bec1395fec4 SHA512 45bdae1d87f6e31d337b22f146b9dee25f4f87357c6ac52bd843556dd742431db10efb55fb8ef815cc9941b5b9f05970d43a6fec0f2d9195c30c633e33d138bf -AUX rocBLAS-4.3.0-change-default-Tensile-library-dir.patch 1533 BLAKE2B d6b48397b1df8da0325590b79fdd351bf7db39fee662dc8809da03cff1715f5b952b7dbebb6889a08ca8b67067ca0626fc6350a825433eaf1e4747eee5f8d70e SHA512 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8f6946cf9d68afd195640ae7e0da8dc33341c67f28813813b5361a56531fa2af4453d075703ea52c66d93a1936cf74688b86aa2fa62b52a7ed5f03272290c232 -DIST rocm-Tensile-4.3.0.tar.gz 14250149 BLAKE2B 030138eaca2a0aadd96801e6dbd72e510716dd90553ef3795c5e04e00a34a05ecae82b24f755e4033a4acfcdb1cf26291da1e7902bb090f89a010d403e832beb SHA512 126db0b413c716fba8d5be9bff7a44fd1badacbf32f3db8d0db649819177db37ebd56fd22dd3c809655f5d29675be115e698cd10bc3d0b4b23878ae3726fce47 -DIST rocm-rocBLAS-4.3.0.tar.gz 11569970 BLAKE2B f11b0acf2bbd5737b036142d3b2cc1e18c38e088a8b7db58156d478dd6718befbb82bb7fd43a38fe64a5427124c5ad5241fa37977f094e6efd195d168d3e5f65 SHA512 490ab1c1e98a8b311ad5630515c448d9bb0a2bf588a08bcbebee345e2954d616b4ffe7c2e03dadca82c590438c42afccb98fe8ba00856aece101b5ffe62ef1e0 DIST rocm-rocBLAS-5.0.2.tar.gz 13295178 BLAKE2B e1abfa06b9ac1545732465857839dae3f3708af49439a306a2b5b1b1b392101c38c95815f2c05a0d9ed29d41b154bc2e16a4f9203a37f5e2f68ee12cc4b44a06 SHA512 2f4a74f49350ede0debcf32229a6b6b95505615723c3f2bee16e4c169a3bb966dfb1971819028f47c525f571bea5662b892e63f655b0d1d2b8f20746bc5fe770 DIST rocm-rocBLAS-5.1.3.tar.gz 13741546 BLAKE2B af10d8cb69bee44ef5aab2dc350e1d9f3b6fddb3a840c17230c4b55b2649a4724c9f2e58c1eafdb3e2716eea016a72a35c3ddb498881b1ce682d780baa8d8b07 SHA512 5ab71838fdd0e9c5848cbf28a19d113353b619a878d8c7d05f64feb32faae2054169c95ed6e9dd6b05a2e807b57229dd2c361c4d289b6e6f17c196558640890f -EBUILD rocBLAS-4.3.0-r1.ebuild 3904 BLAKE2B 634683633376cbb9696a6ed3730ce1c6c0d429b4478123a91a90d39db220f63205111e1e7f2c785fb899d7c569368202f88d4f6f29aff918a699f717b1687d7b SHA512 9871dce941e9566bcb3ef100e307f8d8ef0e237727805064b22678802ebd1e88c721109e9d5a6e83e59bf7ec0ae2799ef9e0d521a3ba107791d3de9e036a5c32 -EBUILD rocBLAS-4.3.0.ebuild 4240 BLAKE2B c1273d44e2c9962227ef23b2adfc557d85f04b904e4ce79238c39b3b3053f78ad9a961f205f5cf130ea4e1bf826162f0902338b58e00f6a3ed8d7e1230be3768 SHA512 c496255b428f579fb959ca839ecc385988e7788361d5d991e07036d930ed2d7e39cebfa79a52d10edfc964bb4229ad9e07f35293e541a5614dfe9ce853d025de EBUILD rocBLAS-5.0.2-r2.ebuild 3844 BLAKE2B 533b6eb02440c1a485d9933b88a5e554fac7638b72e2209dfe8ab83cea53575cdb2e0ae968c8206fda18aca6a695c38df97457d0ea36832f096b0e92af4c91c3 SHA512 aa8e6749b96e54bc3881a265f8719d6c48995f12b033ed6166f30935d2c47ddfaf52af5f7feaf9911aa47c3b4e628a50eedf9f1ffbefbb5923d5996acedd7383 EBUILD rocBLAS-5.1.3.ebuild 3046 BLAKE2B 8c508afc782607532296e3439923db2f2f4b4cc4b9c59c18fd331b16819c82f78a5196cc8852650b1829761fcc8e73105ab96767b68fc00e3b1bb325aa3ec039 SHA512 7a85e77c2a8cc2be8305dd0137bb63446e80a5cfb039bdad07da1c35daf0a49fbadb94b65686f35c445f285378f69e48ba68c4cde26f408c265864a91a131558 MISC metadata.xml 654 BLAKE2B b8a1d40e2ccc2aadccb9a1200e9c78fccb37544fa01c353645372a4ed01a6d153c04ff5d0d96cd7661e80b09eb6c69e8cbc59e466fef117ea1ad5ef54b1334ae SHA512 b880f8f495aee8c337b7cac4054a30f877a1204d0cda03fa90aaa25e4ae163d435c113141f2afef62967f603dea372419b228655e1b26fff53c010c8efdcebf1 diff --git a/sci-libs/rocBLAS/files/rocBLAS-4.3.0-change-default-Tensile-library-dir.patch b/sci-libs/rocBLAS/files/rocBLAS-4.3.0-change-default-Tensile-library-dir.patch deleted file mode 100644 index 1841424c6e56..000000000000 --- a/sci-libs/rocBLAS/files/rocBLAS-4.3.0-change-default-Tensile-library-dir.patch +++ /dev/null @@ -1,39 +0,0 @@ -change the default rocm tensile library search path ---- orig/library/src/tensile_host.cpp 2021-08-21 17:56:47.040481580 +0800 -+++ rocBLAS-rocm-4.3.0/library/src/tensile_host.cpp 2021-08-21 17:58:46.360482372 +0800 -@@ -489,34 +489,7 @@ namespace - } - else - { --#ifndef ROCBLAS_STATIC_LIB -- Dl_info info; -- -- // Find the location of librocblas.so -- // Fall back on hard-coded path if static library or not found -- // [Use a C API (rocblas_sccal) *not* defined in this file to -- // avoid compile-time resolution of the function pointer; cf. -- // https://man7.org/linux/man-pages/man3/dladdr.3.html "BUGS"] -- -- if(dladdr((void*)rocblas_sscal, &info)) -- { -- path = info.dli_fname; -- path = std::string{dirname(&path[0])}; -- } -- else --#endif -- { -- path = "/opt/rocm/rocblas/lib"; -- } -- -- // Find the location of the libraries -- if(TestPath(path + "/../../Tensile/library")) -- path += "/../../Tensile/library"; -- else -- path += "/library"; -- -- if(TestPath(path + "/" + processor)) -- path += "/" + processor; -+ path="@GENTOO_PORTAGE_EPREFIX@/usr/lib64/rocblas/library"; - } - - // only load modules for the current architecture diff --git a/sci-libs/rocBLAS/files/rocBLAS-4.3.0-link-system-blas.patch b/sci-libs/rocBLAS/files/rocBLAS-4.3.0-link-system-blas.patch deleted file mode 100644 index 184b76d7ef38..000000000000 --- a/sci-libs/rocBLAS/files/rocBLAS-4.3.0-link-system-blas.patch +++ /dev/null @@ -1,24 +0,0 @@ -Link system blas libraries rather than the downloaded libraries (in install.sh) - ---- orig/clients/benchmarks/CMakeLists.txt -+++ rocBLAS-rocm-4.2.0/clients/benchmarks/CMakeLists.txt -@@ -49,7 +49,7 @@ target_include_directories( rocblas-benc - $ - ) - --target_link_libraries( rocblas-bench PRIVATE rocblas_fortran_client roc::rocblas lapack cblas ) -+target_link_libraries( rocblas-bench PRIVATE rocblas_fortran_client roc::rocblas lapack cblas -lblas ) - if(LINK_BLIS) - target_link_libraries( rocblas-bench PRIVATE ${BLIS_LIBRARY} ) - endif() ---- orig/clients/gtest/CMakeLists.txt -+++ rocBLAS-rocm-4.2.0/clients/gtest/CMakeLists.txt -@@ -129,7 +129,7 @@ target_include_directories( rocblas-test - $ - ) - --target_link_libraries( rocblas-test PRIVATE rocblas_fortran_client roc::rocblas lapack cblas ${GTEST_LIBRARIES} ) -+target_link_libraries( rocblas-test PRIVATE rocblas_fortran_client roc::rocblas lapack cblas -lblas ${GTEST_LIBRARIES} ) - if(LINK_BLIS) - target_link_libraries( rocblas-test PRIVATE ${BLIS_LIBRARY} ) - endif() diff --git a/sci-libs/rocBLAS/files/rocBLAS-4.3.0-remove-problematic-test-suites.patch b/sci-libs/rocBLAS/files/rocBLAS-4.3.0-remove-problematic-test-suites.patch deleted file mode 100644 index 4265e999f322..000000000000 --- a/sci-libs/rocBLAS/files/rocBLAS-4.3.0-remove-problematic-test-suites.patch +++ /dev/null @@ -1,22 +0,0 @@ -Those tests will fail comparing rocblas vs openblas, because the testing program is so strict that it cannot tolerate the numerical differences which is actually OK. - -https://github.com/ROCmSoftwarePlatform/rocBLAS/issues/1202 ---- orig/clients/gtest/known_bugs.yaml -+++ rocBLAS-rocm-4.3.0/clients/gtest/known_bugs.yaml -@@ -7,6 +7,16 @@ Known bugs: - - { function: gemm_ex, a_type: i8_r, b_type: i8_r, c_type: i32_r, d_type: i32_r, compute_type: i32_r, flags: 0, known_bug_platforms: "gfx900,gfx906,gfx1010,gfx1011,gfx1012,gfx1030" } - - { function: gemm_batched_ex, a_type: i8_r, b_type: i8_r, c_type: i32_r, d_type: i32_r, compute_type: i32_r, flags: 0, known_bug_platforms: "gfx900,gfx906,gfx90a,gfx1010,gfx1011,gfx1012,gfx1030" } - - { function: gemm_strided_batched_ex, a_type: i8_r, b_type: i8_r, c_type: i32_r, d_type: i32_r, compute_type: i32_r, flags: 0, known_bug_platforms: "gfx900,gfx906,gfx1010,gfx1011,gfx1012,gfx1030" } -+# gemv openblas reference differences due to summation order dependent roundoff accumulation with large M float complex -+# 8th significant digit difference vs CPU on single precision float math, leads to expected equality test failure -+# code needs to be changed to a tolerance test or reduce M for float complex type if using equality vs. CPU reference -+- { function: gemv, a_type: f32_c, transA: T, M: 131071 } -+- { function: gemv, a_type: f32_c, transA: C, M: 131071 } -+- { function: gemv_batched, a_type: f32_c, transA: T, M: 131071 } -+- { function: gemv_batched, a_type: f32_c, transA: C, M: 131071 } -+- { function: gemv_strided_batched, a_type: f32_c, transA: T, M: 131071 } -+- { function: gemv_strided_batched, a_type: f32_c, transA: C, M: 131071 } -+ - - #- { function: gemm_ex, a_type: bf16_r, b_type: bf16_r, c_type: bf16_r, d_type: bf16_r, compute_type: f32_r, transA: C, transB: N, M: 512, N: 512, K: 512, lda: 512, ldb: 512, ldc: 512, ldd: 512, alpha: 5.0, alphai: 0.0, beta: 0.0, betai: 0.0, known_bug_platforms: gfx908 } - #- { function: gemm_ex, a_type: bf16_r, b_type: bf16_r, c_type: bf16_r, d_type: bf16_r, compute_type: f32_r, transA: C, transB: N, M: 512, N: 512, K: 512, lda: 512, ldb: 512, ldc: 512, ldd: 512, alpha: 0.0, alphai: 0.0, beta: 3.0, betai: 0.0, known_bug_platforms: gfx908 } diff --git a/sci-libs/rocBLAS/files/rocBLAS-4.3.0-unbundle-Tensile.patch b/sci-libs/rocBLAS/files/rocBLAS-4.3.0-unbundle-Tensile.patch deleted file mode 100644 index c8d99c851b00..000000000000 --- a/sci-libs/rocBLAS/files/rocBLAS-4.3.0-unbundle-Tensile.patch +++ /dev/null @@ -1,22 +0,0 @@ -diff --git a/cmake/virtualenv.cmake b/cmake/virtualenv.cmake -index 4c29c94..f9838c2 100644 ---- a/cmake/virtualenv.cmake -+++ b/cmake/virtualenv.cmake -@@ -11,7 +11,7 @@ set(VIRTUALENV_HOME_DIR ${CMAKE_BINARY_DIR}/virtualenv CACHE PATH "Path to virtu - function(virtualenv_create) - message("${VIRTUALENV_PYTHON_EXE} -m venv ${VIRTUALENV_HOME_DIR} --system-site-packages --clear") - execute_process( -- COMMAND ${VIRTUALENV_PYTHON_EXE} -m venv ${VIRTUALENV_HOME_DIR} --system-site-packages --clear -+ COMMAND true - ) - endfunction() - -@@ -21,7 +21,7 @@ function(virtualenv_install) - message("${VIRTUALENV_HOME_DIR}/bin/python -m pip install ${ARGN}") - execute_process( - RESULT_VARIABLE rc -- COMMAND ${VIRTUALENV_HOME_DIR}/bin/python -m pip install ${ARGN} -+ COMMAND true - ) - if(rc) - message(FATAL_ERROR ${rc}) diff --git a/sci-libs/rocBLAS/rocBLAS-4.3.0-r1.ebuild b/sci-libs/rocBLAS/rocBLAS-4.3.0-r1.ebuild deleted file mode 100644 index 63704e613e53..000000000000 --- a/sci-libs/rocBLAS/rocBLAS-4.3.0-r1.ebuild +++ /dev/null @@ -1,146 +0,0 @@ -# Copyright 1999-2022 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=8 - -PYTHON_COMPAT=( python3_{8..10} ) -DOCS_BUILDER="doxygen" -DOCS_DIR="docs" -DOCS_DEPEND="media-gfx/graphviz" -inherit cmake docs prefix python-any-r1 - -DESCRIPTION="AMD's library for BLAS on ROCm" -HOMEPAGE="https://github.com/ROCmSoftwarePlatform/rocBLAS" -SRC_URI="https://github.com/ROCmSoftwarePlatform/rocBLAS/archive/rocm-${PV}.tar.gz -> rocm-${P}.tar.gz" -S="${WORKDIR}/${PN}-rocm-${PV}" - -LICENSE="BSD" -KEYWORDS="~amd64" -SLOT="0/$(ver_cut 1-2)" -IUSE="benchmark test" -RESTRICT="!test? ( test )" - -BDEPEND="${PYTHON_DEPS} - dev-util/rocm-cmake:${SLOT} - $(python_gen_any_dep ' - dev-util/Tensile[${PYTHON_USEDEP}] - ') - dev-util/Tensile:${SLOT} -" - -DEPEND=" - dev-util/hip:${SLOT} - dev-libs/msgpack - test? ( - virtual/blas - dev-cpp/gtest - sys-libs/libomp - ) - benchmark? ( - virtual/blas - sys-libs/libomp - ) -" - -PATCHES=( - "${FILESDIR}"/${PN}-4.3.0-fix-glibc-2.32-and-above.patch - "${FILESDIR}"/${PN}-4.3.0-change-default-Tensile-library-dir.patch - "${FILESDIR}"/${PN}-4.3.0-link-system-blas.patch - "${FILESDIR}"/${PN}-4.3.0-remove-problematic-test-suites.patch - "${FILESDIR}"/${PN}-4.3.0-unbundle-Tensile.patch -) - -python_check_deps() { - python_has_version "dev-util/Tensile[${PYTHON_USEDEP}]" -} - -src_prepare() { - cmake_src_prepare - # Fit for Gentoo FHS rule - sed -e "/PREFIX rocblas/d" \ - -e "/:\$:" -i library/src/CMakeLists.txt - sed -e "s:rocm_install_symlink_subdir( rocsolver ):#rocm_install_symlink_subdir( rocsolver ):" -i library/src/CMakeLists.txt - - cmake_src_prepare -} - -src_configure() { - # Grant access to the device - addwrite /dev/kfd - addpredict /dev/dri/ - - local mycmakeargs=( - -Wno-dev - -DCMAKE_SKIP_RPATH=ON - -DCMAKE_INSTALL_PREFIX="${EPREFIX}/usr/" - -DCMAKE_INSTALL_INCLUDEDIR="${EPREFIX}/usr/include/rocsolver" - -DBUILD_CLIENTS_SAMPLES=NO - -DBUILD_CLIENTS_TESTS=$(usex test ON OFF) - -DBUILD_CLIENTS_BENCHMARKS=$(usex benchmark ON OFF) - ${AMDGPU_TARGETS+-DAMDGPU_TARGETS="${AMDGPU_TARGETS}"} - ) - - CXX="hipcc" cmake_src_configure -} - -src_test() { - addwrite /dev/kfd - addwrite /dev/dri/ - cd "${BUILD_DIR}/clients/staging" || die - LD_LIBRARY_PATH="${BUILD_DIR}/library/src" ./rocsolver-test || die -} - -src_install() { - cmake_src_install - - if use benchmark; then - cd "${BUILD_DIR}" || die - dobin clients/staging/rocsolver-bench - fi -} diff --git a/sci-libs/rocSPARSE/Manifest b/sci-libs/rocSPARSE/Manifest index b984e9d961e5..ec90ae301232 100644 --- a/sci-libs/rocSPARSE/Manifest +++ b/sci-libs/rocSPARSE/Manifest @@ -1,9 +1,6 @@ -AUX rocSPARSE-4.3.0-remove-matrices-unpacking.patch 933 BLAKE2B 03e9ded8e313352dcdb181351fb4decc1c1e6d7e2e8019b7624c0d3273182f1ba7b296fdfa862e8be8d13d023561a8febb5b982e4a8b16dc8fc1af3f508d2196 SHA512 1b63b4e2b930b4cde29c41ec9f2a5c6f5f4b8291ba7aa6a5a714a2fbfd2b7978c5cd6b3f4a5f5c63da6765e0696efadc54942096a0a985f1d3cc668477c44969 AUX rocSPARSE-5.0.2-enable-gfx1031.patch 645 BLAKE2B 4e20882057d1f8687f47831cc8945b787606b6f6d1d676ba5e5e12d8ff61e1c22711da57b50d988d44b2962c6001d270ebe2ffcb751901a6eb64635e553a7cd9 SHA512 24fbfed3cafdf00c7e13d25136427b30c573191e32830431f7185fd9a2f537c110f83f4e6f8603f3c17381d316f13c3b626eeaa9331f9035e7bc9b34d0c7c70e AUX rocSPARSE-5.0.2-remove-incorrect-assert.patch 1658 BLAKE2B 26aa66d7d61657eb591f7b345b64211f3cfb47f0a1b656716b32e299799bb8172483b4898878e532f7c6ca3f99bcb4a8789a1b6a913bc40dfebdc144613b0f27 SHA512 bfae11079c621b3372678ade78bea979b751777a48060b5ef26b3567fb89b1cf8591c998e199be649b03157662ef9b4889ca79498b16cf0bf6fbd1b9a532e485 AUX rocSPARSE-5.0.2-remove-matrices-unpacking.patch 1205 BLAKE2B 0d903453692025f6f239c8b5d2f11dd6f9dfe5c09a63395898920326e0dbd6aeff37fdf2dde8e89ea1cbdc60252ab87b7ef020b56a726853d2f7261addcf00c8 SHA512 52ec3913f89f7886d6b8fb9ef54ca313c64e4c9d374507a0d89a8c7cf846e8f8f6b8a4ad266b23015869a79d2eaadb75c5540ca53e40163cb0fbdc2b1819e645 -DIST rocSPARSE-4.0.0.tar.gz 587761 BLAKE2B 25f9f0183c06b574505fe6e9011b32ea4fbe48c0a1883b8991baf45b8a2238312f352e614c0069531c986e548453b6e7b7a77f883dffea82ed41df488964b55d SHA512 4a4acf24a789ea58b53a8d06ea528a6aed8eabac21a7a3cd73011e9b31d03dceb488cc72f29c5513205f2b538d24e9dbaccda1a932bcc466cd04a65606a77b3b -DIST rocSPARSE-4.3.0.tar.gz 809183 BLAKE2B 06a83d98572927f0f2c65f4f36194394b66a02a5ce9d3e21da04c53e9ad97809daffe02a35691aa52466f7dfb4d4a8c645b87e1e4da579de7f91323df3a41d59 SHA512 e3ee5a15d36c3002ee60aabd94c7f47b0cb9f0b5a33cefa9061df9f04b1fcc3c1503e4f01e2f36c07477179c6753827b505e9b512e8b5bfca00f76e3efd99c1d DIST rocSPARSE-5.0.2.tar.gz 855762 BLAKE2B dc1e84157f1eecd6bedd6620147e4f88341b94cb0f1507a6264af40c891541ef3e81a8a429b3160dac1606a855a566abbff98e458f581f5f60de31d5751682ef SHA512 4f985c0784246616dd1b3e4fd669033296e45b1f8faa1ab25143e2f085b9bf6556a495de23e9463c2ae45d6038c1cff01d18930c9762d53975e15d4d2d5d4d0a DIST rocSPARSE-5.1.3.tar.gz 943788 BLAKE2B f9d5fc34d74bc10f3e5bd0a18da41fe9b35a2f01aca3a74979960958fd0e7648fca96493ba9d767119a452dd75ede0733959d0d4bae84615b7a1ff212c8412a3 SHA512 735aa210bbdc3f31b0ed4defe0288606e255788e877f24ed25506d780552a779305fe5bfd692a3e720e9b286073894300fcbcf161d41e1b23abf2110a9536bf3 DIST rocSPARSE_ASIC_320k.tar.gz 11301444 BLAKE2B a00cc4a3ededab3fb56339319e34e936645ddce2dee3c630153b37e337384c207b0a2829227fb7f4c2db1fe33383e97410ab7ad459d391c025f5410843d51cf2 SHA512 1db3af391c30a371c1ac0087436e266721474273a39d5b2b6d56408d950dcbbee004750e4dce4e3dbc4cb512f38f6d945676d7f29b62c52fd5a7fed0fe789e03 @@ -30,8 +27,6 @@ DIST rocSPARSE_scircuit.tar.gz 8635362 BLAKE2B 3f1d6e35a6a774664bd653dd466fa3c07 DIST rocSPARSE_shipsec1.tar.gz 22175245 BLAKE2B f1d34482b8c3d3ee48033097d7d6f9b648e3c396a5ab2379efdc7de218adec519a235e2e94904f85a4f24c8d4ff15af096ca089379e00db47519023f64b85c16 SHA512 e027097e74f8ffc058339855b1c38cab52c68b661058318b429487e7188e11e907f6734894f9c71d1e38d262986525fba8d0f165bc0a1b4632d7e25be8db4f17 DIST rocSPARSE_sme3Dc.tar.gz 42483568 BLAKE2B f0d16b58f6ea28e67727637697a812a0b10d524c73aeb82f702411b9ebaea3670780e762ed0701aae80c6829e950233f74555523ef2d6c5740b007c7a65c03d4 SHA512 c5a0be2db919a45310a73ea1dd96d0d30168135f887a8c5c3d7ca11e2c3d12ea7d1331be20968d0135bd18da4ef2b043db68eeb7567b6f0f8daf782b87083c3a DIST rocSPARSE_webbase-1M.tar.gz 11360460 BLAKE2B 01b1d06adb5fb32fa402ed888d25a7e52a34779b078fc2e21c60e688d03579bb4ca8694f5ee4a824f7859952d55590a1fd9449dc80d6fe894d7b662b918882d4 SHA512 6401a965b8f6dd5392879956fde3c94f77fe1801a4a43428c03b6d639031575c647eab47b1babe53f4ecc2c3b8fc183e8339536b78dcd0d94ce62bfedd87c161 -EBUILD rocSPARSE-4.0.0-r1.ebuild 1166 BLAKE2B fc45fdaaf8d5f20afcc0d477eac01d30100a3ac3355ddae786ee934f46ef55b4f6ac3b284875fc905f75452cbfbb655ad4cfb9f916905e1a6091e8b97a14f141 SHA512 221e3aea6c45e7d7a6edc3b96db32ed9d2deb040f1f4cafa9cbb139a146aa7500d4619e6e8db39683fed9c0bc34053dc8ede22525340457c1774f6ea90297a98 -EBUILD rocSPARSE-4.3.0-r3.ebuild 4923 BLAKE2B b41130ea7ef8c145e635d31181f83fefccf769e5dc56ee5e1371eaca8fc7d4cf81e327fc3393f4d733166c7c2074b4e463430361924b110399f35dd53d4f4422 SHA512 7c69789058388aff5ce2bf207c30e811d87348e34db18ce5ceadba7cdc2d500bb6d8d42970a97bfd1c7c1f8f8facef33c9ad0f346daa46c6d09312dfe2d3c7c1 EBUILD rocSPARSE-5.0.2.ebuild 5067 BLAKE2B f58a1979616271a2ddd2b970f07a6b42118703e089431125b30cfe74dca42b145a2668f9698ee04847f9d188112646f20580d5ff8798bc5ea130ee802629ec65 SHA512 09332f3d7634d46b404c26c1184f9509d2a093f13c4830014f3661316099444a55d8e8e2c596fae8f5b8624bee1b4f204e2b3ec53537c0f990e7bb9a228bed53 EBUILD rocSPARSE-5.1.3.ebuild 4850 BLAKE2B 1636a91211ce3225ef7280916c6a3ede2c0b636255a94c967e5286b76bf75c906234c2f392ca576f267f1c4841d58f9e274b9e0d91780475b18f28d2b1a0beba SHA512 482fd5c2dc85020b63c06f5b3ba02892adf35dc003cf2ef1cd1ddc0f62dbcbf8c5a83495adbb98acfdfefc1bb208f5a3f14d0aa75d3f5c496b45100a71c3c03f MISC metadata.xml 695 BLAKE2B db1c67ff216cd9c9a972c9b388f85f6e762e0a7bddffca1336219ce6ebe39f6a841da4c8c78084d91f48a5bb6a26ad0047a2a1a60915da5110b3a41977f3b641 SHA512 2f246ec382d78e414a00aedcd7a2c871ccf5b74d25d160a0f7d6012feb51c6c12861b5152cac32d3e46d0d1acea7e8b10f42f4b501abb9d778cd3c886331f59c diff --git a/sci-libs/rocSPARSE/files/rocSPARSE-4.3.0-remove-matrices-unpacking.patch b/sci-libs/rocSPARSE/files/rocSPARSE-4.3.0-remove-matrices-unpacking.patch deleted file mode 100644 index 2f19725a6e10..000000000000 --- a/sci-libs/rocSPARSE/files/rocSPARSE-4.3.0-remove-matrices-unpacking.patch +++ /dev/null @@ -1,36 +0,0 @@ -Don't let cmake handle test data download, unpack and convert - ---- orig/clients/tests/CMakeLists.txt -+++ rocSPARSE-rocm-4.3.0/clients/tests/CMakeLists.txt -@@ -23,31 +23,6 @@ - - find_package(GTest 1.10.0 REQUIRED) - --# --# Client matrices. --# --if(NOT EXISTS "${CMAKE_MATRICES_DIR}") -- # -- # Download. -- # -- set(CMAKE_MATRICES_DIR ${PROJECT_BINARY_DIR}/matrices CACHE STRING "Matrices directory.") -- -- if(NOT TARGET rocsparse) -- set(CONVERT ${CMAKE_SOURCE_DIR}/../deps/convert CACHE STRING "Convert tool mtx2csr.") -- include(${CMAKE_SOURCE_DIR}/../cmake/ClientMatrices.cmake) -- else() -- set(CONVERT ${CMAKE_SOURCE_DIR}/deps/convert CACHE STRING "Convert tool mtx2csr.") -- include(${CMAKE_SOURCE_DIR}/cmake/ClientMatrices.cmake) -- endif() -- --else() -- -- # -- # Copy. -- # -- execute_process(COMMAND cp -r ${CMAKE_MATRICES_DIR} ${PROJECT_BINARY_DIR}/matrices) -- --endif() - - set(ROCSPARSE_TEST_SOURCES - test_axpby.cpp diff --git a/sci-libs/rocSPARSE/rocSPARSE-4.0.0-r1.ebuild b/sci-libs/rocSPARSE/rocSPARSE-4.0.0-r1.ebuild deleted file mode 100644 index 14e2518eb4a7..000000000000 --- a/sci-libs/rocSPARSE/rocSPARSE-4.0.0-r1.ebuild +++ /dev/null @@ -1,51 +0,0 @@ -# Copyright 1999-2021 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=7 - -inherit cmake - -DESCRIPTION="Basic Linear Algebra Subroutines for sparse computation" -HOMEPAGE="https://github.com/ROCmSoftwarePlatform/rocSPARSE" -SRC_URI="https://github.com/ROCmSoftwarePlatform/rocSPARSE/archive/rocm-${PV}.tar.gz -> rocSPARSE-${PV}.tar.gz" - -LICENSE="MIT" -KEYWORDS="~amd64" -SLOT="0" - -RDEPEND="=dev-util/hip-$(ver_cut 1-2)* - =sci-libs/rocPRIM-$(ver_cut 1-2)*" -DEPEND="${RDEPEND}" - -S="${WORKDIR}/rocSPARSE-rocm-${PV}" - -rocSPARSE_V="0.1" - -BUILD_DIR="${S}/build/release" - -src_prepare() { - sed -e "s/PREFIX rocsparse//" \ - -e "/ -+#include - - #if !defined(__GNUC__) || ((10000 * __GNUC__ + 100 * __GNUC_MINOR__ + __GNUC_PATCHLEVEL__) >= 40500) - # ifdef THRUST_HOST_NEEDS_RESTORATION diff --git a/sci-libs/rocThrust/rocThrust-4.0.0-r1.ebuild b/sci-libs/rocThrust/rocThrust-4.0.0-r1.ebuild deleted file mode 100644 index 4ca8a58bad69..000000000000 --- a/sci-libs/rocThrust/rocThrust-4.0.0-r1.ebuild +++ /dev/null @@ -1,49 +0,0 @@ -# Copyright 1999-2021 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=7 - -inherit cmake - -DESCRIPTION="Thrust dependent software on AMD GPUs" -HOMEPAGE="https://github.com/ROCmSoftwarePlatform/rocThrust" -SRC_URI="https://github.com/ROCmSoftwarePlatform/rocThrust/archive/rocm-${PV}.tar.gz -> rocThrust-${PV}.tar.gz" - -LICENSE="Apache-2.0" -KEYWORDS="~amd64" -SLOT="0" - -RDEPEND=">=dev-util/hip-${PV} - =sci-libs/rocPRIM-${PV}*" -DEPEND="${RDEPEND}" - -S="${WORKDIR}/rocThrust-rocm-${PV}" - -PATCHES="${FILESDIR}/rocThrust-4.0-operator_new.patch" - -src_prepare() { - sed -e "/PREFIX rocthrust/d" \ - -e "/DESTINATION/s:rocthrust/include/thrust:include/rocthrust/thrust:" \ - -e "/rocm_install_symlink_subdir(rocthrust)/d" \ - -e "/> "${T}"/99trilinos <<- EOF - LDPATH="${EPREFIX}/usr/$(get_libdir)/trilinos" - PATH="${EPREFIX}/usr/$(get_libdir)/trilinos/bin" - EOF - doenvd "${T}"/99trilinos -} diff --git a/sci-libs/trilinos/trilinos-13.2.0.ebuild b/sci-libs/trilinos/trilinos-13.2.0.ebuild deleted file mode 100644 index b4df7074f964..000000000000 --- a/sci-libs/trilinos/trilinos-13.2.0.ebuild +++ /dev/null @@ -1,252 +0,0 @@ -# Copyright 1999-2022 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=8 - -CMAKE_MAKEFILE_GENERATOR=emake -inherit cmake toolchain-funcs - -DESCRIPTION="Scientific library collection for large scale problems" -HOMEPAGE="http://trilinos.sandia.gov/" -MY_PV="${PV//\./-}" -PATCHSET="r0" -SRC_URI="https://github.com/${PN}/Trilinos/archive/${PN}-release-${MY_PV}.tar.gz -> ${P}.tar.gz - https://dev.gentoo.org/~tamiko/distfiles/${P}-patches-${PATCHSET}.tar.xz" - -KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" -LICENSE="BSD LGPL-2.1" -SLOT="0" - -IUSE=" - adolc all-packages arprec clp cuda eigen glpk gtest hdf5 hwloc hypre - matio metis mkl mumps netcdf openmp petsc qd scalapack scotch - sparse superlu taucs tbb test threads tvmet yaml zlib X -" - -# TODO: fix export cmake function for tests -RESTRICT="test" - -RDEPEND=" - !dev-cpp/kokkos - dev-libs/boost:= - sys-libs/binutils-libs:= - virtual/blas - virtual/lapack - virtual/mpi - adolc? ( sci-libs/adolc ) - arprec? ( sci-libs/arprec ) - clp? ( sci-libs/coinor-clp ) - cuda? ( >=dev-util/nvidia-cuda-toolkit-3.2 ) - eigen? ( dev-cpp/eigen:3 ) - glpk? ( sci-mathematics/glpk ) - gtest? ( dev-cpp/gtest ) - hdf5? ( sci-libs/hdf5:=[mpi] ) - hypre? ( sci-libs/hypre:= ) - hwloc? ( sys-apps/hwloc:= ) - matio? ( sci-libs/matio ) - mkl? ( sci-libs/mkl ) - metis? ( sci-libs/metis ) - mumps? ( sci-libs/mumps ) - netcdf? ( sci-libs/netcdf:= ) - petsc? ( sci-mathematics/petsc ) - qd? ( sci-libs/qd ) - scalapack? ( sci-libs/scalapack ) - scotch? ( sci-libs/scotch:= ) - sparse? ( sci-libs/cxsparse sci-libs/umfpack ) - superlu? ( sci-libs/superlu:= ) - taucs? ( sci-libs/taucs ) - tbb? ( dev-cpp/tbb:= ) - tvmet? ( dev-libs/tvmet ) - yaml? ( dev-cpp/yaml-cpp:= ) - zlib? ( sys-libs/zlib ) - X? ( x11-libs/libX11 )" -DEPEND="${RDEPEND} - virtual/pkgconfig" - -S="${WORKDIR}/Trilinos-${PN}-release-${MY_PV}" - -PATCHES=( - "${WORKDIR}"/patches -) - -pkg_pretend() { - [[ ${MERGE_TYPE} != binary ]] && use openmp && tc-check-openmp -} - -pkg_setup() { - [[ ${MERGE_TYPE} != binary ]] && use openmp && tc-check-openmp -} - -trilinos_conf() { - local dirs libs d - for d in $($(tc-getPKG_CONFIG) --libs-only-L $1); do - dirs="${dirs};${d:2}" - done - [[ -n ${dirs} ]] && mycmakeargs+=( "-D${2}_LIBRARY_DIRS=${dirs:1}" ) - for d in $($(tc-getPKG_CONFIG) --libs-only-l $1); do - libs="${libs};${d:2}" - done - [[ -n ${libs} ]] && mycmakeargs+=( "-D${2}_LIBRARY_NAMES=${libs:1}" ) - dirs="" - for d in $($(tc-getPKG_CONFIG) --cflags-only-I $1); do - dirs="${dirs};${d:2}" - done - [[ -n ${dirs} ]] && mycmakeargs+=( "-D${2}_INCLUDE_DIRS=${dirs:1}" ) -} - -# -# The following packages are currently disabled: -# - Adelus/Zadelus due to underlinkage. -# - Moertel due to underlinkage -# - SEACAS is incompatible with netcdf, see -# https://github.com/trilinos/Trilinos/tree/master/packages/seacas#netcdf -# - -src_configure() { - local mycmakeargs=( - -DBUILD_SHARED_LIBS=ON - -DCMAKE_INSTALL_PREFIX="${EPREFIX}" - -DCMAKE_SKIP_INSTALL_RPATH=ON - -DCMAKE_INSTALL_RPATH_USE_LINK_PATH=OFF - -DTrilinos_INSTALL_CONFIG_DIR="${EPREFIX}/usr/$(get_libdir)/cmake" - -DTrilinos_INSTALL_INCLUDE_DIR="${EPREFIX}/usr/include/trilinos" - -DTrilinos_INSTALL_LIB_DIR="${EPREFIX}/usr/$(get_libdir)/trilinos" - -DTrilinos_ENABLE_ALL_PACKAGES="$(usex all-packages)" - -DTrilinos_ENABLE_Adelus=OFF - -DTrilinos_ENABLE_Moertel=OFF - -DTrilinos_ENABLE_PyTrilinos=OFF - -DTrilinos_ENABLE_SEACAS=OFF - -DTrilinos_ENABLE_Amesos=ON - -DTrilinos_ENABLE_AztecOO=ON - -DTrilinos_ENABLE_COMPLEX_DOUBLE=ON - -DTrilinos_ENABLE_COMPLEX_FLOAT=ON - -DTrilinos_ENABLE_EpetraExt=ON - -DTrilinos_ENABLE_Epetra=ON - -DTrilinos_ENABLE_Ifpack=ON - -DTrilinos_ENABLE_ML=ON - -DTrilinos_ENABLE_MueLu=ON - -DTrilinos_ENABLE_OpenMP="$(usex openmp)" - -DTrilinos_ENABLE_ROL=ON - -DTrilinos_ENABLE_Sacado=ON - -DTrilinos_ENABLE_Teuchos=ON - -DTrilinos_ENABLE_Tpetra=ON - -DTrilinos_ENABLE_Zoltan=ON - -DTrilinos_ENABLE_TESTS="$(usex test)" - -DTPL_ENABLE_BinUtils=ON - -DTPL_ENABLE_BLAS=ON - -DTPL_ENABLE_LAPACK=ON - -DTPL_ENABLE_MPI=ON - -DTPL_ENABLE_ADOLC="$(usex adolc)" - -DTPL_ENABLE_AMD="$(usex sparse)" - -DTPL_ENABLE_ARPREC="$(usex arprec)" - -DTPL_ENABLE_BLACS="$(usex scalapack)" - -DTPL_ENABLE_BoostLib=ON - -DTPL_ENABLE_Boost=ON - -DTPL_ENABLE_Clp="$(usex clp)" - -DTPL_ENABLE_CSparse="$(usex sparse)" - -DTPL_ENABLE_CUDA="$(usex cuda)" - -DTPL_ENABLE_CUSPARSE="$(usex cuda)" - -DTPL_ENABLE_Eigen="$(usex eigen)" - -DTPL_ENABLE_GLPK="$(usex glpk)" - -DTPL_ENABLE_gtest="$(usex gtest)" - -DTPL_ENABLE_HDF5="$(usex hdf5)" - -DTPL_ENABLE_HWLOC="$(usex hwloc)" - -DTPL_ENABLE_HYPRE="$(usex hypre)" - -DTPL_ENABLE_Matio="$(usex matio)" - -DTPL_ENABLE_METIS="$(usex metis)" - -DTPL_ENABLE_MKL="$(usex mkl)" - -DTPL_ENABLE_MUMPS="$(usex mumps)" - -DTPL_ENABLE_Netcdf="$(usex netcdf)" - -DTPL_ENABLE_PARDISO_MKL="$(usex mkl)" - -DTPL_ENABLE_PETSC="$(usex petsc)" - -DTPL_ENABLE_Pthread="$(usex threads)" - -DTPL_ENABLE_QD="$(usex qd)" - -DTPL_ENABLE_SCALAPACK="$(usex scalapack)" - -DTPL_ENABLE_Scotch="$(usex scotch)" - -DTPL_ENABLE_SuperLU="$(usex superlu)" - -DTPL_ENABLE_TAUCS="$(usex taucs)" - -DTPL_ENABLE_TBB="$(usex tbb)" - -DTPL_ENABLE_Thrust="$(usex cuda)" - -DTPL_ENABLE_TVMET="$(usex tvmet)" - -DTPL_ENABLE_UMFPACK="$(usex sparse)" - -DTPL_ENABLE_X11="$(usex X)" - -DTPL_ENABLE_yaml-cpp="$(usex yaml)" - -DTPL_ENABLE_Zlib="$(usex zlib)" - ) - - # - # Make sure some critical configuration options are always set - # correctly independently of what Trilinos dependency resolver thinks - # it should be doing. - # - local mycmakeargs+=( - -DAmesos2_ENABLE_LAPACK=ON - -DAmesos2_ENABLE_MUMPS=OFF - -DTpetra_INST_SERIAL=ON - ) - - use eigen && \ - mycmakeargs+=( - -DEigen_INCLUDE_DIRS="${EPREFIX}/usr/include/eigen3" - ) - use hypre && \ - mycmakeargs+=( - -DHYPRE_INCLUDE_DIRS="${EPREFIX}/usr/include/hypre" - ) - use scotch && \ - mycmakeargs+=( - -DScotch_INCLUDE_DIRS="${EPREFIX}/usr/include/scotch" - ) - - # cxsparse is a rewrite of csparse + extras - use sparse && \ - mycmakeargs+=( - -DCSparse_LIBRARY_NAMES="cxsparse" - ) - - # mandatory blas and lapack - trilinos_conf blas BLAS - trilinos_conf lapack LAPACK - use superlu && trilinos_conf superlu SuperLU - use metis && trilinos_conf metis METIS - - # blacs library is included in scalapack these days - if use scalapack; then - trilinos_conf scalapack SCALAPACK - mycmakeargs+=( - -DBLACS_LIBRARY_NAMES="scalapack" - -DBLACS_INCLUDE_DIRS="${EPREFIX}/usr/include/blacs" - ) - fi - - # - # Make sure we use the compiler wrappers in order to build trilinos. - # - [ ! -z "${CC}"] && export OMPI_CC="${CC}" MPICH_CC="${CC}" && tc-export OMPI_CC MPICH_CC - [ ! -z "${CXX}"] && export OMPI_CXX="${CXX}" MPICH_CXX="${CXX}" && tc-export OMPI_CXX MPICH_CXX - export CC=mpicc CXX=mpicxx && tc-export CC CXX - - # Trilinos needs a custom build type: - local CMAKE_BUILD_TYPE=Release - - cmake_src_configure -} - -src_install() { - cmake_src_install - - # Clean up the mess: - mv "${ED}"/bin "${ED}/usr/$(get_libdir)"/trilinos || die "mv failed" - mv "${ED}/usr/$(get_libdir)"/trilinos/cmake/* "${ED}/usr/$(get_libdir)"/cmake || die "mv failed" - rmdir "${ED}/usr/$(get_libdir)/trilinos/cmake" || die "rmdir failed" - - # - # register $(get_libdir)/trilinos in LDPATH so that the dynamic linker - # has a chance to pick up the libraries... - # - cat >> "${T}"/99trilinos <<- EOF - LDPATH="${EPREFIX}/usr/$(get_libdir)/trilinos" - PATH="${EPREFIX}/usr/$(get_libdir)/trilinos/bin" - EOF - doenvd "${T}"/99trilinos -} -- cgit v1.2.3