From 4f2d7949f03e1c198bc888f2d05f421d35c57e21 Mon Sep 17 00:00:00 2001 From: V3n3RiX Date: Mon, 9 Oct 2017 18:53:29 +0100 Subject: reinit the tree, so we can have metadata --- sci-mathematics/jags/Manifest | 11 ++++++++ sci-mathematics/jags/jags-3.4.0.ebuild | 46 ++++++++++++++++++++++++++++++++++ sci-mathematics/jags/jags-4.0.0.ebuild | 46 ++++++++++++++++++++++++++++++++++ sci-mathematics/jags/jags-4.1.0.ebuild | 45 +++++++++++++++++++++++++++++++++ sci-mathematics/jags/jags-4.2.0.ebuild | 45 +++++++++++++++++++++++++++++++++ sci-mathematics/jags/metadata.xml | 21 ++++++++++++++++ 6 files changed, 214 insertions(+) create mode 100644 sci-mathematics/jags/Manifest create mode 100644 sci-mathematics/jags/jags-3.4.0.ebuild create mode 100644 sci-mathematics/jags/jags-4.0.0.ebuild create mode 100644 sci-mathematics/jags/jags-4.1.0.ebuild create mode 100644 sci-mathematics/jags/jags-4.2.0.ebuild create mode 100644 sci-mathematics/jags/metadata.xml (limited to 'sci-mathematics/jags') diff --git a/sci-mathematics/jags/Manifest b/sci-mathematics/jags/Manifest new file mode 100644 index 000000000000..5e782f9f6412 --- /dev/null +++ b/sci-mathematics/jags/Manifest @@ -0,0 +1,11 @@ +DIST JAGS-3.4.0.tar.gz 1677450 SHA256 2beaa9a2672c2c95efc55ffa4c8b597a872f20232373daebd17ad539d3d7d82b SHA512 7a330ea41eab63b23d8ae3622c6920f0dc3dba653a18256957b9b862bb86b746ff706e9e9bf3f806524250b439161a6df4ad05af682354073f9b0074f9825896 WHIRLPOOL 48f2bf92f80ea0558697701320e142a61b3eb5cfefe234973a6a189096b7887ec5ea829f8f6183bf9ad4a0f6fb07d769c710b721ec1e211772cbeaea0187c8e2 +DIST JAGS-4.0.0.tar.gz 1880476 SHA256 a1d572269029d90d4e8b25757fd7ae9678994bd682937ec505ddcf06185d2c4c SHA512 bbe4f4600dff0fc1db6f8548b8d386ea804174d69788646681de6d006a0e0ab018fb01257b5737f871d10c8b59865950fb91b6a9cad5d1e6addc415004c6f82c WHIRLPOOL d1f2ad15834252c63300259c789f69ca0fa008d0c2008d504db2c394642f7a63180baae76bc272a33a92c83addc373fd9ce026063ea74b40397ac902c2272aed +DIST JAGS-4.1.0.tar.gz 1872634 SHA256 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+HOMEPAGE="http://mcmc-jags.sourceforge.net/" +SRC_URI="mirror://sourceforge/project/mcmc-jags/JAGS/3.x/Source/${MYP}.tar.gz" +LICENSE="GPL-2" +IUSE="doc" + +SLOT="0" +KEYWORDS="amd64 x86 ~amd64-linux ~x86-linux" + +RDEPEND=" + virtual/blas + virtual/lapack" +DEPEND="${RDEPEND} + virtual/pkgconfig + doc? ( + virtual/latex-base + dev-texlive/texlive-latexextra + )" + +S="${WORKDIR}/${MYP}" + +src_configure() { + local myeconfargs=( + --with-blas="$($(tc-getPKG_CONFIG) --libs blas)" + --with-lapack="$($(tc-getPKG_CONFIG) --libs lapack)" + ) + autotools-utils_src_configure +} + +src_compile() { + autotools-utils_src_compile all $(use doc && echo docs) +} + +src_install() { + autotools-utils_src_install + use doc && dodoc "${BUILD_DIR}"/doc/manual/*.pdf +} diff --git a/sci-mathematics/jags/jags-4.0.0.ebuild b/sci-mathematics/jags/jags-4.0.0.ebuild new file mode 100644 index 000000000000..5ad4ed026ac1 --- /dev/null +++ b/sci-mathematics/jags/jags-4.0.0.ebuild @@ -0,0 +1,46 @@ +# Copyright 1999-2015 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 + +EAPI=5 + +inherit autotools-utils toolchain-funcs + +MYP="JAGS-${PV}" + +DESCRIPTION="Just Another Gibbs Sampler for Bayesian MCMC simulation" +HOMEPAGE="http://mcmc-jags.sourceforge.net/" +SRC_URI="mirror://sourceforge/project/mcmc-jags/JAGS/4.x/Source/${MYP}.tar.gz" + +SLOT="0" +LICENSE="GPL-2" +KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" +IUSE="doc" + +RDEPEND=" + virtual/blas + virtual/lapack" +DEPEND="${RDEPEND} + virtual/pkgconfig + doc? ( + virtual/latex-base + dev-texlive/texlive-latexextra + )" + +S="${WORKDIR}/${MYP}" + +src_configure() { + local myeconfargs=( + --with-blas="$($(tc-getPKG_CONFIG) --libs blas)" + --with-lapack="$($(tc-getPKG_CONFIG) --libs lapack)" + ) + autotools-utils_src_configure +} + +src_compile() { + autotools-utils_src_compile all $(usex doc docs "") +} + +src_install() { + autotools-utils_src_install + use doc && dodoc "${BUILD_DIR}"/doc/manual/*.pdf +} diff --git a/sci-mathematics/jags/jags-4.1.0.ebuild b/sci-mathematics/jags/jags-4.1.0.ebuild new file mode 100644 index 000000000000..e5ebc8c33151 --- /dev/null +++ b/sci-mathematics/jags/jags-4.1.0.ebuild @@ -0,0 +1,45 @@ +# Copyright 1999-2016 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 + +EAPI=6 + +inherit eutils toolchain-funcs + +MYP="JAGS-${PV}" + +DESCRIPTION="Just Another Gibbs Sampler for Bayesian MCMC simulation" +HOMEPAGE="http://mcmc-jags.sourceforge.net/" +SRC_URI="mirror://sourceforge/project/mcmc-jags/JAGS/4.x/Source/${MYP}.tar.gz" + +SLOT="0" +LICENSE="GPL-2" +KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" +IUSE="doc" + +RDEPEND=" + virtual/blas + virtual/lapack" +DEPEND="${RDEPEND} + virtual/pkgconfig + doc? ( + virtual/latex-base + dev-texlive/texlive-latexextra + )" + +S="${WORKDIR}/${MYP}" + +src_configure() { + econf \ + --with-blas="$($(tc-getPKG_CONFIG) --libs blas)" \ + --with-lapack="$($(tc-getPKG_CONFIG) --libs lapack)" +} + +src_compile() { + emake all $(usex doc docs "") +} + +src_install() { + default + use doc && dodoc doc/manual/*.pdf + prune_libtool_files +} diff --git a/sci-mathematics/jags/jags-4.2.0.ebuild b/sci-mathematics/jags/jags-4.2.0.ebuild new file mode 100644 index 000000000000..0ff7b08efd9f --- /dev/null +++ b/sci-mathematics/jags/jags-4.2.0.ebuild @@ -0,0 +1,45 @@ +# Copyright 1999-2017 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 + +EAPI=6 + +inherit eutils toolchain-funcs + +MYP="JAGS-${PV}" + +DESCRIPTION="Just Another Gibbs Sampler for Bayesian MCMC simulation" +HOMEPAGE="http://mcmc-jags.sourceforge.net/" +SRC_URI="mirror://sourceforge/project/mcmc-jags/JAGS/4.x/Source/${MYP}.tar.gz" + +SLOT="0" +LICENSE="GPL-2" +KEYWORDS="amd64 x86 ~amd64-linux ~x86-linux" +IUSE="doc" + +RDEPEND=" + virtual/blas + virtual/lapack" +DEPEND="${RDEPEND} + virtual/pkgconfig + doc? ( + virtual/latex-base + dev-texlive/texlive-latexextra + )" + +S="${WORKDIR}/${MYP}" + +src_configure() { + econf \ + --with-blas="$($(tc-getPKG_CONFIG) --libs blas)" \ + --with-lapack="$($(tc-getPKG_CONFIG) --libs lapack)" +} + +src_compile() { + emake all $(usex doc docs "") +} + +src_install() { + default + use doc && dodoc doc/manual/*.pdf + prune_libtool_files +} diff --git a/sci-mathematics/jags/metadata.xml b/sci-mathematics/jags/metadata.xml new file mode 100644 index 000000000000..ff35c78e124a --- /dev/null +++ b/sci-mathematics/jags/metadata.xml @@ -0,0 +1,21 @@ + + + + + sci-mathematics@gentoo.org + Gentoo Mathematics Project + + + JAGS is Just Another Gibbs Sampler. It is a program for analysis of + Bayesian hierarchical models using Markov Chain Monte Carlo (MCMC) + simulation not wholly unlike BUGS. + JAGS was written with three aims in mind: + * To have an engine for the BUGS language that runs on Unix + * To be extensible, allowing users to write their own functions, + distributions and samplers. + * To be a plaftorm for experimentation with ideas in Bayesian modelling + + + mcmc-jags + + -- cgit v1.2.3