From 420eeee727d39d869d864caddb04a80dafda7160 Mon Sep 17 00:00:00 2001
From: V3n3RiX <venerix@redcorelinux.org>
Date: Tue, 17 Oct 2017 17:51:45 +0100
Subject: gentoo resync : 17.10.2017

---
 sci-mathematics/rstudio/Manifest                   |  28 ---
 .../files/rstudio-0.97.336-boost-1.53.patch        |  64 -------
 .../files/rstudio-0.97.336-linker_flags.patch      |  18 --
 .../rstudio/files/rstudio-0.97.336-paths.patch     | 112 ------------
 .../rstudio/files/rstudio-0.97.336-prefs.patch     |  24 ---
 .../files/rstudio-0.97.551-boost-1.53.patch        |  64 -------
 .../files/rstudio-0.97.551-linker_flags.patch      |  18 --
 .../rstudio/files/rstudio-0.97.551-paths.patch     | 112 ------------
 .../rstudio/files/rstudio-0.97.551-prefs.patch     |  24 ---
 sci-mathematics/rstudio/rstudio-0.97.336.ebuild    | 143 ---------------
 sci-mathematics/rstudio/rstudio-0.97.551.ebuild    | 143 ---------------
 sci-mathematics/rstudio/rstudio-0.98.1028.ebuild   | 164 -----------------
 sci-mathematics/rstudio/rstudio-0.98.1091.ebuild   | 198 ---------------------
 sci-mathematics/rstudio/rstudio-0.98.490-r1.ebuild | 129 --------------
 sci-mathematics/rstudio/rstudio-0.98.490.ebuild    | 142 ---------------
 sci-mathematics/rstudio/rstudio-0.98.932.ebuild    | 173 ------------------
 sci-mathematics/rstudio/rstudio-0.98.953.ebuild    | 174 ------------------
 17 files changed, 1730 deletions(-)
 delete mode 100644 sci-mathematics/rstudio/files/rstudio-0.97.336-boost-1.53.patch
 delete mode 100644 sci-mathematics/rstudio/files/rstudio-0.97.336-linker_flags.patch
 delete mode 100644 sci-mathematics/rstudio/files/rstudio-0.97.336-paths.patch
 delete mode 100644 sci-mathematics/rstudio/files/rstudio-0.97.336-prefs.patch
 delete mode 100644 sci-mathematics/rstudio/files/rstudio-0.97.551-boost-1.53.patch
 delete mode 100644 sci-mathematics/rstudio/files/rstudio-0.97.551-linker_flags.patch
 delete mode 100644 sci-mathematics/rstudio/files/rstudio-0.97.551-paths.patch
 delete mode 100644 sci-mathematics/rstudio/files/rstudio-0.97.551-prefs.patch
 delete mode 100644 sci-mathematics/rstudio/rstudio-0.97.336.ebuild
 delete mode 100644 sci-mathematics/rstudio/rstudio-0.97.551.ebuild
 delete mode 100644 sci-mathematics/rstudio/rstudio-0.98.1028.ebuild
 delete mode 100644 sci-mathematics/rstudio/rstudio-0.98.1091.ebuild
 delete mode 100644 sci-mathematics/rstudio/rstudio-0.98.490-r1.ebuild
 delete mode 100644 sci-mathematics/rstudio/rstudio-0.98.490.ebuild
 delete mode 100644 sci-mathematics/rstudio/rstudio-0.98.932.ebuild
 delete mode 100644 sci-mathematics/rstudio/rstudio-0.98.953.ebuild

(limited to 'sci-mathematics/rstudio')

diff --git a/sci-mathematics/rstudio/Manifest b/sci-mathematics/rstudio/Manifest
index 0ad32c7b024a..e16435a3b7d3 100644
--- a/sci-mathematics/rstudio/Manifest
+++ b/sci-mathematics/rstudio/Manifest
@@ -1,12 +1,4 @@
 AUX rsession.conf 1145 SHA256 23dea938def95eaf559666faba1701f686000d1af510a579d13e415d99b8226e SHA512 90395faac5aa80ce52ae56da3565512b8a880a14ab2acf9a24c7a56c9d03f1e3d5f63ebaca66efa68f5c5c9c831235846df22ca37f20ba071437a2a963b808cf WHIRLPOOL c57d10c1fdccb49004825f4f99e8fb966e4270167be36116a5b73c289bb4af89fb36a99275d1b35d0f2f4b6f3dfc2fa45a9e66892ea9d59a8223afa888990db6
-AUX rstudio-0.97.336-boost-1.53.patch 3048 SHA256 86290a2a4ac39cae8de988739c702f726451d2d4f76d515954edac2db6d5e20e SHA512 eca9b5d112fb84f83533c74b099694c5c5b1eaac3d6b0978a4b2236328b51d41893b1e3e94f3afbbb49cf841401d05cfba6941ff9a1a7f8a2cd35a57cda6176c WHIRLPOOL 280be4773ebeb1deedbc4a32cb07c85f8321bee0676a55bada93c3d5c350e2a4690665723b02ad4132e99b7463f23562f922790004f18fa0064332e1e07883de
-AUX rstudio-0.97.336-linker_flags.patch 806 SHA256 9fa104ef1fc659aeda8108d2a6418679685ae8d0a19e3f5f97a634ad1d1d05d8 SHA512 2049077768ef72faf502387b5eeef80948d0ec748bc52df7bff6e507dd92a8c52b3a7f7f82eda526ea1289f16720ae51fd40c059bd2d04f5eacd51911b995f06 WHIRLPOOL df36ec2fd3c3e9bced79b6f29ecfbeebde8df6a7873f5de8d46ac0ca7f26c7851426c8b869de12ad302d7c152fa2212af25ed4b52e123f324d92cc7085e6e772
-AUX rstudio-0.97.336-paths.patch 5543 SHA256 376b0ba06c3744902b14ce644d481b1a61cd030981faaaadacbf20fa8dea7857 SHA512 42063474152f0c044f9afea3e93812ddae98de012a7f2d3d1b5f23b95353538b97c584bd6e61c8eb5d314b63b4af6161d7088037a8210687c31fd64d53788a4d WHIRLPOOL a028f30c1b5ce8e3773cee2099c683bb2fbe1f0b16ddf45a5bffba499c8460f078ffe25c9b64a8b774464ea72ea71b8cb11f1623789e82c21b897825c650e3ea
-AUX rstudio-0.97.336-prefs.patch 1008 SHA256 ae5bcb603cdd112adb9f5929b9cf15b33db36a9f9efc76bd24fb67855e99150f SHA512 2edd5dee1d59ed2abc64c2f68f354bd0c2d23de649790e956112131988de68d649a09ce9cd893d2715f656e90cabfee8a67f9ef98464b5fc2a6eb17d29e4a50e WHIRLPOOL 83f7f85f2c40a21697db1a5af9f28de80a802005e910a78905b4b45d66accfec03e67fb1c35cc7091eedf9f7d98bcd89e427e200b999edf1b206e1115fe2aac7
-AUX rstudio-0.97.551-boost-1.53.patch 3048 SHA256 86290a2a4ac39cae8de988739c702f726451d2d4f76d515954edac2db6d5e20e SHA512 eca9b5d112fb84f83533c74b099694c5c5b1eaac3d6b0978a4b2236328b51d41893b1e3e94f3afbbb49cf841401d05cfba6941ff9a1a7f8a2cd35a57cda6176c WHIRLPOOL 280be4773ebeb1deedbc4a32cb07c85f8321bee0676a55bada93c3d5c350e2a4690665723b02ad4132e99b7463f23562f922790004f18fa0064332e1e07883de
-AUX rstudio-0.97.551-linker_flags.patch 806 SHA256 9fa104ef1fc659aeda8108d2a6418679685ae8d0a19e3f5f97a634ad1d1d05d8 SHA512 2049077768ef72faf502387b5eeef80948d0ec748bc52df7bff6e507dd92a8c52b3a7f7f82eda526ea1289f16720ae51fd40c059bd2d04f5eacd51911b995f06 WHIRLPOOL df36ec2fd3c3e9bced79b6f29ecfbeebde8df6a7873f5de8d46ac0ca7f26c7851426c8b869de12ad302d7c152fa2212af25ed4b52e123f324d92cc7085e6e772
-AUX rstudio-0.97.551-paths.patch 5543 SHA256 376b0ba06c3744902b14ce644d481b1a61cd030981faaaadacbf20fa8dea7857 SHA512 42063474152f0c044f9afea3e93812ddae98de012a7f2d3d1b5f23b95353538b97c584bd6e61c8eb5d314b63b4af6161d7088037a8210687c31fd64d53788a4d WHIRLPOOL a028f30c1b5ce8e3773cee2099c683bb2fbe1f0b16ddf45a5bffba499c8460f078ffe25c9b64a8b774464ea72ea71b8cb11f1623789e82c21b897825c650e3ea
-AUX rstudio-0.97.551-prefs.patch 1008 SHA256 ae5bcb603cdd112adb9f5929b9cf15b33db36a9f9efc76bd24fb67855e99150f SHA512 2edd5dee1d59ed2abc64c2f68f354bd0c2d23de649790e956112131988de68d649a09ce9cd893d2715f656e90cabfee8a67f9ef98464b5fc2a6eb17d29e4a50e WHIRLPOOL 83f7f85f2c40a21697db1a5af9f28de80a802005e910a78905b4b45d66accfec03e67fb1c35cc7091eedf9f7d98bcd89e427e200b999edf1b206e1115fe2aac7
 AUX rstudio-0.98.1091-boost-1.57.patch 1876 SHA256 cd570ec085eefdb5c6e195210ae33285f347e0c4c80d8309a9275886725e8618 SHA512 5edda18a495e6e95683e4822cda632fbf965cab040424e82368c2d45a2a632057de69c7d3211c40295dd17985fc5786714ef3076b6cb41894f9eeeee1ab5b9ae WHIRLPOOL 20aafb0e70d2e442c8a7f3358eb075ae8d5b5579a1a555c8cca0c380cf82c463a052c53f7a85c748cf0266f4d46ba1380f8c77998a58c56d7d08b89cf94d8f3f
 AUX rstudio-0.98.1091-pandoc.patch 1372 SHA256 9373f509352e6e1b70e27c28c27b0c345750fd30f83b2a6ec4d3e1e495d0936d SHA512 15b51507c71849a0acb2f70b2bd2c85e693263a999975fa9db876bef30b436c4ade10f956ad4aee513a9ca170083ab06aeb42190db7454f13c5f4aaca2ae5b49 WHIRLPOOL e207c543c9cc6448ec8ebbac56f916db27bd3f50f8da9d6f21b3f7509322c06fa47558af545108b89d2c8d1b148348646f0a2a5418a72f286de047089f745765
 AUX rstudio-0.98.490-linker_flags.patch 806 SHA256 9fa104ef1fc659aeda8108d2a6418679685ae8d0a19e3f5f97a634ad1d1d05d8 SHA512 2049077768ef72faf502387b5eeef80948d0ec748bc52df7bff6e507dd92a8c52b3a7f7f82eda526ea1289f16720ae51fd40c059bd2d04f5eacd51911b995f06 WHIRLPOOL df36ec2fd3c3e9bced79b6f29ecfbeebde8df6a7873f5de8d46ac0ca7f26c7851426c8b869de12ad302d7c152fa2212af25ed4b52e123f324d92cc7085e6e772
@@ -30,22 +22,10 @@ AUX rstudio-server.service.in 161 SHA256 446649a73c0722950656ff858895f9d0eff98f4
 DIST chromedriver-linux 19303552 SHA256 1ff3e9fc17e456571c440ab160f25ee451b2a4d36e61c8e297737cff7433f48c SHA512 18774ede961dec222058dd0e3f128d63732cd444ee310136b44d5bf508a4f2f2c164a2c8d195d80bce8b5fb6303559e167f82f384e4a58e30f48b151a4206ee8 WHIRLPOOL 06534c131d3a8ade4fb12ad94955f430f23d86654342357d223e78e210cc401416361a847934bccb3957702bbe8fc8a6dd7f18416461edf486145bde96c7091e
 DIST core-dictionaries.zip 876339 SHA256 4341a9630efb9dcf7f215c324136407f3b3d6003e1c96f2e5e1f9f14d5787494 SHA512 9c5830cc9fed575e223f1c61f02e48c5aea6801bb0cd2586f02437c17fdffdb1d36c396d5a8ecbe02ba01196e73458304345b1f6b92c052bc7a7d05961fac2c9 WHIRLPOOL 316dced8ac46e4216613b0b850c33d4c1e10ef0ecd954d786eb131ea80b34e66ba3d39a0ef25b45230b64ded415737ddabef8f7d68f4d42caea98679cff44ee0
 DIST gin-1.5.zip 1055663 SHA256 f561f4eb5d5fe1cff95c881e6aed53a86e9f0de8a52863295a8600375f96ab94 SHA512 3f6649565f9600daaca6ddf3fb431925b5a1ce1ada38e6389de64cef617abba9d3f49c555d0a20053fb06f17ccbe4e1141b39966fbe4b2975d7b120377504897 WHIRLPOOL e66d348ed275eb20518369c39592a5a03ee4257422e2947520385377939de65a54d131332818362a47597392026db48ed1332f11ae218e336798498ae5d5b196
-DIST gwt-2.5.0.rc1.zip 104156555 SHA256 83a6dec583d1b7f3bf3fd2e321d89c1d95881eed1f81c7ea4056201fc105258b SHA512 c0c4f502b4ca191537eada53eb0458c0d33282661423f6d2648e6107ed8e38465b189377fcd0d9babcbf2c688e16080d33cbd7165ed20dafda7fedc39a74e163 WHIRLPOOL b37f12d1937b6479b97e274a59a1856dcf0c5cc3b767b6a19f65d7807e1f32cc2483358f1414c4c9e427d890eb1e0617fe8af84c6f0dca4a9ded64ae5ffde129
-DIST gwt-2.5.1.zip 111070580 SHA256 c457df45a3eed582452c5784ed11746685df494c0ffe4a8ae4de52945916593a SHA512 845c6bc6ce5ade57eeddd8b40cc3458f5e7d40d881cb4017615897eebd5349bfecfef8cd3e3b05a09b33ecf9ee0262d4a84700b0965a27b40cb60d701457a7ea WHIRLPOOL 9d820026e97f96402fc6b69a06f24d2f79df830a0afdba808ab98f14a32312bc999692ad5822005acf6fdcd1b4261918a318f9f20980c640cf32292d5df83a05
-DIST gwt-2.6.0.zip 108819959 SHA256 bd4c13a5d1078446d519a742ee233971e55c447d1b87ffd5b1f90e54dd876b9a SHA512 40690f83f6271ab58abf0ccbf2da1045ea142867ed88accdce91f65a70e39ecf48070696caffcab3f797523ee69b0431b67155b7f04c2856cd95856a7e20d2fb WHIRLPOOL d59ce0f9b13a9956b07905479b394397020fcbc85ac3aabff9ebd74d39b7e660c862e7fe1adb32160e82186d83db10d1254121846e1a9bdafacc38efc55a38fd
 DIST gwt-2.7.0.zip 108818328 SHA256 aa65061b73836190410720bea422eb8e787680d7bc0c2b244ae6c9a0d24747b3 SHA512 a1eed5cc25c888cf81d4f22b1f9494d5d8567b911f7aeb1d164a6359120543668280afe1a3ffc9ed87b139c7db67fbcaaabde2066e3279909d7cd6fc22eaf499 WHIRLPOOL 96ca3c3bd39116fd6109a3e436f41875b6e3343596165d2a7941a961562f5ebd412f0a455d57fc47a9551d0ba76df172a4ad2622500715625faa325d94f3d961
 DIST packrat-0.98.1000.tar.gz 97677 SHA256 c2da99ea6b62fd460f36b76f6c9b91865c42851545d61817c181bf6109e2df6b SHA512 2290c768ecf27a037e73c3f8336b9fd71c68ff19d071b4a8fbc469550d29007cacacdb75f854f73b5db2139a5104f129b85a3612e2ee47bd6118ee13f7d103a6 WHIRLPOOL a2d0c3c3e04cbc496f59abbf1065fcd0b7ae25433ce0b7ca8e75ab59362f320508537b2a62ed1028dd5baad6cbab5ef2e91dd9d3af327bbd04c08a96c57d80f4
-DIST packrat_0.3.0.tar.gz 79974 SHA256 5ea35b6cb964188f4ffe58a3c9cf2c1f5a436569117c218d097e0fa66d032ebb SHA512 7f964e94e62193466e9bc880fea2c2fef8a0996061d9b971789e4e33a2d1e6327033f03236327545aa73e1112e2bea730c3fc0984729ecdec6f1582855c1b249 WHIRLPOOL 7ff4c3f3681300d402e8738b1aceac7ee2dbd55edb36966e3b7453b1b90182093979436d2c1193d460418251bc370ab222f61142311d8fe1a5a42527c5869aa3
 DIST rmarkdown-0.98.1000.tar.gz 1423820 SHA256 56e9f964f805627f6d6face9bf09e6435be4cc48321447ad4041fee86d6f88b4 SHA512 df3540c24c87930fe55bff2ffe67c86c219800cb00ed72ba9451ecd0d0cad411548a78c1a04b9a2e301e853616dcb77e09129c4e48ade6f16d3f14b7ea7e4852 WHIRLPOOL 51098cd48a12a61da312fc1cc96927626db4a19cc069c88f615dd20abe40f52a7b1ac1325b52b1922110ffa76a7f255d9ff2a75cd05d3de01d1b96f0c8286790
-DIST rmarkdown_0.2.49.tar.gz 3846795 SHA256 56b9a032b07d62c6af2a4a2d04007cccf379a9c8e91426c59f265c8b7fd992ee SHA512 46d15c354c9a90ae75a7dc3660b1ea82d097aaceb3dd220a4a8c6f4b22751ad2d63fd5ef3d56821160716ab6552529cef6513b5cd7043368d13513f537511fef WHIRLPOOL d658a091d1b4508ea38fbf2f3691517dc2b814aa3ffaec25483263266106756a89712d7c8a2ec3de8d6d45234d5f8b11340c287509bd836be5875527077f7fcd
 DIST rsconnect_0.4.1.4_fcac892a69817febd7b655b189bf57193260cda0.tar.gz 197051 SHA256 e1e3e1f799eb8be679be9a2ed5aad7e9ce6cd603e3cb43fdc242490f0c311113 SHA512 208dc349f4aa7613ecf94939aba60d22d3a06972344b526c9b6c951015571f5922927bca08db571a7b8a268e42609a4f558f01278c9685f6da2ffc66a1f95ade WHIRLPOOL 4e3d64de00a98190c435d76f12a401d30950fdc7590b6bcc886ae50d4771825d39f93ea2bdcb4a9db026361c522f16f11297ff89dcb15c35f9471c1abf4f4e2c
-DIST rstudio-0.97.336.tar.gz 12598580 SHA256 e6c24d6a865827d3a39e64508976a825bba705efe0921eb06f9a95ba58aefcd1 SHA512 bfaf6218cb400e83a97a320cf633e4656f1552e27bb9843fda1837945a3823fb0df20a2c86e0b6d76608d98806b0acf163aaba10783c923ef900b3eaf03b7569 WHIRLPOOL eca7b837ccff6cc6595298c3137f8663c0754256763a1d049e44a11e10daf53914234c426e004cc1f0158d7b4a38319f61653f78785c7189a64413fc196848c2
-DIST rstudio-0.97.551.tar.gz 12602738 SHA256 caed5f6b6ec57139ddf550dc2f51c1f9a74b39b81b878863b97e1a12edecf498 SHA512 f855a5ba3a86e44c870a4843e94678a1f6eeedc49934d8ad42f202815f93d282913a0be739435be63e510a6ec81b7a1436e4c911acbff955f5fb28b78b00fd10 WHIRLPOOL d8cd3d2978b690fc8c83696cb2017748e74b38309174ac85d6d35d5a1dd91d8e0d8ea06177b349754b3be9eb5e78e04b1d23b82f9e7940d062b262c1eb7eb58e
-DIST rstudio-0.98.1028.tar.gz 15555649 SHA256 19827c3d05b4817530fb07f235fe38ec5e391324acd1d5d8ab6711d0db4757ef SHA512 db1be9f91263386ad0fb8addc80421434695d2c8dd53101af268e878fd59c59b9349cc9456d7096d2c660ee2681cd0172d8f4d8432ccf7322a1a2b473ce291fd WHIRLPOOL ab2974d2e529fea03fe641569d4b74a6eb1d86179be47de46531a970d5f70624824e08573835d531a5033d20f800117174926b83aee290f784ac31f7a9627d7d
-DIST rstudio-0.98.1091.tar.gz 15551758 SHA256 61745708096b5feb3d88befab65adf67dd386262cde1ef2b351f56695f5b9ac2 SHA512 6b2fcd7418118b8845266dc12ff4680623a68a8fdfda2bdc523e8cd30139e99fa29063438fbb441f23d04e57715eec1ee21763baf0ab77d313b763d8b3d9e3a0 WHIRLPOOL 356297217bdc70954b79695755fb873127e9b7c5a8ff2be18e237b559638aa1ec3c0349d8606598bd81e4057914e518748c236dc4a701d9a1f27805c2a4c7327
-DIST rstudio-0.98.490.tar.gz 14989329 SHA256 e38296a10b12c9e769a8be0545c36745999b9ba90942f7ffb6d27f05192a7f93 SHA512 b167083eb4adf1203da63299e61c9e3f40b8aeb4728d25c9d840f8a22659aad8de442dbba3a68e7d11f6157680d3a3636f6d5fecbabab82fd8d1a8278e3f1cb1 WHIRLPOOL d7c07aea3aef424aa9fa05f74b8222cae69b9ce287ba67d80591dc2a433471e7127d975119667560bf6667190d128b0ffcf82f641792075dacf826f4d76df568
-DIST rstudio-0.98.932.tar.gz 15515025 SHA256 e4a69a2f746cb7cfcacd3811f15e41a9d156175607da334f412614cc4cb70728 SHA512 beeb8c035d4f8524bd3e497162e3a218e92fbd1c1704ff3bc99a70a1248244155e3998272a6aa985b59cfa67c640adec877465f5d50acb9e47abca2657f2a06f WHIRLPOOL e422a2cef857aa9d094dd11e62b6c762a2a7477e7d84fd66456152c6521aebd94d4c365980ed6c06fc1c90d5a62426376d978de0ed23186d4732c0b148cc62bc
-DIST rstudio-0.98.953.tar.gz 15518231 SHA256 944f5882a0d61f551cd6f6cbe7882b5a5ea5be12d2c6d5ec9e79cee65869dbb7 SHA512 38a17d1abf91f4e775c4d735152fe6c8030b2df771bd7333fb3c9408fe14ac0b6180d7eaad7ac09ce2d50e5dcaa5a3b828909b30f507fd7c35fe27f7bd96866c WHIRLPOOL e2135f425b48b952282d8c44bd121517098521715c70537a6ac1a3be1732928666c5cb40fbc20b9f394a606e0e116723190790a202cbf62986ffbca528646058
 DIST rstudio-0.99.473.tar.gz 16993092 SHA256 a402995251393d50fa70e2e02188a8b32dc34e067f2f8461f087bf71f643585c SHA512 5615840501f7629e82100fee78c35b8d4dc78d78932d65c2e91a6472bc94726389566f5853a99e3d0631fd260e59acea5a40acf82f72709741b89a1ed3c901af WHIRLPOOL 809549c76efee8b29452584ab4295bcbbf533f8100c8caf4dd3b4a3c8843dc54a0d8f3178a6aecab5c188f2498a74daa6c6677fc6d43bd7dd861487c557e48df
 DIST rstudio-0.99.482.tar.gz 16992873 SHA256 1185d6ce5d3872e134f3255668d8f082370c760f06ec409c7b84c0936f52c4bf SHA512 bdb845cceae851d27323448a3570621bcb2aba7742e9e1669c88f3ebeaaade8c8371eb38f2ad348d7e2b740778c34f73e59013502ae3cebafba84e5d249c3e52 WHIRLPOOL 743440227c8d7e56000b1ff0b1a12def50e006b4f34d2067587274e2bae0eda42656787fc0cf6c51ffdbfcca08fc6eab0d042891bd77e4446b6fe26c6d19cc05
 DIST rstudio-0.99.483.tar.gz 16993049 SHA256 85ce1a2f40690e4ed0338b153a1b3279ce9564396d8c6d6201a0ad39297d4a9a SHA512 7d9cc8b471a4d799f286193da5f6f950f85e82949ede0f1ffe3626a429a49204878fb731250e5f54164a48e1d6e9cbb19a04a38ff83e35fd46c0ba05ef78a9bc WHIRLPOOL 0c5c1d86b0bafe9d5ca02397793f902b4dca7edc3f507a472b8b235f91965d8a769a7873cc87d834fbb121792b52eb6908018ce6579acdf3d285b6ec986abc20
@@ -64,14 +44,6 @@ DIST rstudio-1.0.44.tar.gz 17774065 SHA256 43ece6cfdd1a13ac0e17f2a50154a30a1a14a
 DIST selenium-java-2.37.0.zip 24625928 SHA256 0eebba65d8edb01c1f46e462907c58f5d6e1cb0ddf63660a9985c8432bdffbb7 SHA512 68624e82dbc751a25c50fad72702a98eb30d77fd4337d2a969f8e06bcc49e5f8c835cd27ec53772f3375014ddde1d5636936e966b75f3594a9f86aa18ba4e779 WHIRLPOOL eb6659aae26f3c78b6f998546b23d0636c9d00ed8a7f985db1463ac4bd483ccb3e643d84e2ca0f59e0636a8de79eb552ff1d68eb6f9c06907029f7552d8f7777
 DIST selenium-server-standalone-2.37.0.jar 34730734 SHA256 97bc8c699037fb6e99ba7af570fb60dbb1b7ce30cde2448287a44ef65b13023e SHA512 b215446d42d2d1f69664349b6ae6dc53a532d3624c91254f0f4183d0ad764648792e5cc1126a55a1e60d9687d55200fed01d6d2f46cc3d853b1fa6ee38111018 WHIRLPOOL 20640591534f31f24825a9ed139589b182e8b60d86541bf0be104d3cc0280983f6566bd0459f2253ac3875b48a2798b205bac8f815a119fff6db625ce9bbc29e
 DIST shinyapps-0.98.1000.tar.gz 910095 SHA256 b95c512ae0a0fb4335878d9cfcf9073e2cb3ccfed73543abe27ea8878ed36d57 SHA512 3162317c4c20cfc1497e952a8235867084d629ae88407e6c465b3e208adb1dc97abfe6b9922e0374ddf4c8e38a76e112942bd312c54a66f74e6f2a3fe4c0a07c WHIRLPOOL ecc2bce78387cb42e9989163d8fca29220e66f085acde3323417058aebb624dafa8c0e1873c7d79e67324cbd5aad250ef9fcdbbc8f659d64482233b95d898a15
-EBUILD rstudio-0.97.336.ebuild 3883 SHA256 716effc57c4c7b8c333ef62fafc9e3fbd8e518079f2d5afc74a96e2fffc6fceb SHA512 020c421da22404c6ca76fcf648c612c09cfffb7664cbe12462eb226f7c587be62e811de7c3efe66dd4f6a7126d1dc1f5217c84135879e781361768b1b6658b0d WHIRLPOOL 886bfd988ae2248dbbc60742c7db35901aa713d83a879f34cf71fcafc2981d0f91dba594fe0c346b5e1f40076d8a02d56b096bf68c219cc12acd6b8b416fbacb
-EBUILD rstudio-0.97.551.ebuild 3883 SHA256 716effc57c4c7b8c333ef62fafc9e3fbd8e518079f2d5afc74a96e2fffc6fceb SHA512 020c421da22404c6ca76fcf648c612c09cfffb7664cbe12462eb226f7c587be62e811de7c3efe66dd4f6a7126d1dc1f5217c84135879e781361768b1b6658b0d WHIRLPOOL 886bfd988ae2248dbbc60742c7db35901aa713d83a879f34cf71fcafc2981d0f91dba594fe0c346b5e1f40076d8a02d56b096bf68c219cc12acd6b8b416fbacb
-EBUILD rstudio-0.98.1028.ebuild 4662 SHA256 10af5dd192cbdc3408b1d753ae2c7e6b98effab31a081e605b8a1c96b513bc42 SHA512 418c6639f6f000706355d5c0b522e81f02a0359b3ca84cbf0a9842d55bd7f8d17a369c68167b230e7300a581653428bee3cd24713529a0199ff88d94dd38dd29 WHIRLPOOL b2910c9c1a262de040c1d5852dc6e80b77a9f65ba38059560f8f1eddfe09a6bbb29c72bdbc4d35e64a090d9aea11abc292d1137d2a413c342e725b5b578f4648
-EBUILD rstudio-0.98.1091.ebuild 6041 SHA256 619b84fcc218b6723c87d0a404f391fde43c7bb704f7540b32eb53ee3a2357a5 SHA512 38dfc7495eb86ee8436fb388e2212df7aa21f3615f05127403015e214e59297bdf94de0c30f22c93a5ae9db85b541d73a253bed17355edad3f83ab1379d5c2ab WHIRLPOOL 420aa7ac88e3219a915d0a4ae7be2ec5ab8234da3dffa62e2a0f23c20fd08f35888a7b2740f032bbc7b53becd62cb6a975318b3071aabd25c9a195a7b427f0fd
-EBUILD rstudio-0.98.490-r1.ebuild 3291 SHA256 8d0124fca469deecc9d80ef4be905a48905b7f1ec62221a3db22af6cf4eaeea2 SHA512 3d8f408f9eec0a3fb8df580572114fb33db9e6c3c561d72fffee158113813f1f0ac944e307824d8ddcf91bcc61f9001b4e7bad57a23235d58b4f32b3a496bd1f WHIRLPOOL fe6102bf95fbe4e2df7930a116ef18afede38f5f6542ee3f4fa65df3f6e17d48092849667813c57a302c823e16cb486e89b460f3c7a8b18fd73ec7747860414d
-EBUILD rstudio-0.98.490.ebuild 3810 SHA256 b482f8181e6b9e2273349cd62e24ab5a3365ec29c027ac9ee003d0dfb94a15c4 SHA512 2b84fc7b013076526fad78e1f279089cb259c845ba36a8ada2e552d9e75ff425a6c6f54c79badd6bd1b72af2fdb6b0e72be7088bb2dbb88c81f7851614841461 WHIRLPOOL a58ac7110e6d81add426e44b4fce6200cafc981596f1f0a530f84b29d9d5981489d005c26d6be5362debff3b9295c4c0ed689b80268d6a9927c958deb4dbce02
-EBUILD rstudio-0.98.932.ebuild 5057 SHA256 ce7c40b20c854091e5e9a92b042bb443a38829fee8fe1ab6d1e97e37c1c5018e SHA512 7b4f7c35c20c290b2dd6b843957b4abd92ff504222b437c0207fb69b7bac2582a03d6ddb91ed850c8d69e37422b7630afc2cb7034c8602b64c586a6a82fb48bb WHIRLPOOL d52a04fe50b31fc8824fd38900a557cf92d8872609704e0b4b5f8d392d7b1833a30c3092f3ee9a16510d11e7e1b5790660feaa5aa3d8b34e0c450a2dff3f9b2f
-EBUILD rstudio-0.98.953.ebuild 5098 SHA256 225c82d85ff08107f2a59fb8c6cd2932072a7212016269c66c2d5a0314add14b SHA512 b23e382098450b805ecdfe3b3ea5765e7b6d59eb66fb359b07687e927eb6bc346d6db3e03aca01438ef91506abc01fe28896222fa38e6632079dc06282bd989c WHIRLPOOL 90fb55b830fcaf81b2d42329bcee3ca97e601398b654be71ea8722ff5d77746bbbf51a2a9d5e0af77b48d142913a5baad046cd593aa567b8109cc7b244aaf253
 EBUILD rstudio-0.99.473-r1.ebuild 8050 SHA256 c6667b6d549cc57bb7b8515111dbc05d735ab0d3ffb74114d0f10b373fa64f9a SHA512 9106ce74affd22edc748c31dea1196e8b84efc3e4814426eb25d37864689f576507bda5b91fad6fd56631073a3f120022c55408226ef0f54df5520842dfbc4e6 WHIRLPOOL d47e7efeeadb8f910fb6fed93dbf34a215f3c07ad55e379d3a5bc156ce7bf0f02a84e81ce26c3e73b68329f4e38e79ce6eed5c68bac90066d68bd6233ce78434
 EBUILD rstudio-0.99.482.ebuild 8050 SHA256 c6667b6d549cc57bb7b8515111dbc05d735ab0d3ffb74114d0f10b373fa64f9a SHA512 9106ce74affd22edc748c31dea1196e8b84efc3e4814426eb25d37864689f576507bda5b91fad6fd56631073a3f120022c55408226ef0f54df5520842dfbc4e6 WHIRLPOOL d47e7efeeadb8f910fb6fed93dbf34a215f3c07ad55e379d3a5bc156ce7bf0f02a84e81ce26c3e73b68329f4e38e79ce6eed5c68bac90066d68bd6233ce78434
 EBUILD rstudio-0.99.483.ebuild 8050 SHA256 c6667b6d549cc57bb7b8515111dbc05d735ab0d3ffb74114d0f10b373fa64f9a SHA512 9106ce74affd22edc748c31dea1196e8b84efc3e4814426eb25d37864689f576507bda5b91fad6fd56631073a3f120022c55408226ef0f54df5520842dfbc4e6 WHIRLPOOL d47e7efeeadb8f910fb6fed93dbf34a215f3c07ad55e379d3a5bc156ce7bf0f02a84e81ce26c3e73b68329f4e38e79ce6eed5c68bac90066d68bd6233ce78434
diff --git a/sci-mathematics/rstudio/files/rstudio-0.97.336-boost-1.53.patch b/sci-mathematics/rstudio/files/rstudio-0.97.336-boost-1.53.patch
deleted file mode 100644
index 38bb63a8ab61..000000000000
--- a/sci-mathematics/rstudio/files/rstudio-0.97.336-boost-1.53.patch
+++ /dev/null
@@ -1,64 +0,0 @@
-=== modified file 'src/cpp/core/include/core/http/AsyncServer.hpp'
---- src/cpp/core/include/core/http/AsyncServer.hpp	2013-07-09 12:02:58 +0000
-+++ src/cpp/core/include/core/http/AsyncServer.hpp	2013-07-09 12:03:34 +0000
-@@ -264,7 +264,7 @@
-          
-          // convert to cannonical HttpConnection
-          boost::shared_ptr<AsyncConnection> pAsyncConnection =
--             boost::shared_static_cast<AsyncConnection>(pConnection);
-+             boost::static_pointer_cast<AsyncConnection>(pConnection);
- 
-          // call the appropriate handler to generate a response
-          std::string uri = pRequest->uri();
-
-=== modified file 'src/cpp/core/include/core/http/LocalStreamAsyncClient.hpp'
---- src/cpp/core/include/core/http/LocalStreamAsyncClient.hpp	2013-07-09 12:02:58 +0000
-+++ src/cpp/core/include/core/http/LocalStreamAsyncClient.hpp	2013-07-09 12:03:36 +0000
-@@ -87,7 +87,7 @@
-       boost::shared_ptr<AsyncClient<boost::asio::local::stream_protocol::socket> >
-                                     ptrShared = shared_from_this();
- 
--      return boost::shared_static_cast<LocalStreamAsyncClient>(ptrShared);
-+      return boost::static_pointer_cast<LocalStreamAsyncClient>(ptrShared);
-    }
- 
- private:
-
-=== modified file 'src/cpp/core/include/core/http/TcpIpAsyncClient.hpp'
---- src/cpp/core/include/core/http/TcpIpAsyncClient.hpp	2013-07-09 12:02:58 +0000
-+++ src/cpp/core/include/core/http/TcpIpAsyncClient.hpp	2013-07-09 12:03:32 +0000
-@@ -74,7 +74,7 @@
-       boost::shared_ptr<AsyncClient<boost::asio::ip::tcp::socket> > ptrShared
-                                                 = shared_from_this();
- 
--      return boost::shared_static_cast<TcpIpAsyncClient>(ptrShared);
-+      return boost::static_pointer_cast<TcpIpAsyncClient>(ptrShared);
-    }
- 
- private:
-
-=== modified file 'src/cpp/core/include/core/http/TcpIpAsyncClientSsl.hpp'
---- src/cpp/core/include/core/http/TcpIpAsyncClientSsl.hpp	2013-07-09 12:02:58 +0000
-+++ src/cpp/core/include/core/http/TcpIpAsyncClientSsl.hpp	2013-07-09 12:03:39 +0000
-@@ -109,7 +109,7 @@
-       boost::shared_ptr<AsyncClient<boost::asio::ssl::stream<boost::asio::ip::tcp::socket> > > ptrShared
-                                                  = shared_from_this();
- 
--      return boost::shared_static_cast<TcpIpAsyncClientSsl>(ptrShared);
-+      return boost::static_pointer_cast<TcpIpAsyncClientSsl>(ptrShared);
-    }
- 
-    virtual bool isShutdownError(const boost::system::error_code& ec)
-
-=== modified file 'src/cpp/session/http/SessionHttpConnectionListenerImpl.hpp'
---- src/cpp/session/http/SessionHttpConnectionListenerImpl.hpp	2013-07-09 12:02:58 +0000
-+++ src/cpp/session/http/SessionHttpConnectionListenerImpl.hpp	2013-07-09 12:03:29 +0000
-@@ -256,7 +256,7 @@
-    {
-       // convert to cannonical HttpConnection
-       boost::shared_ptr<HttpConnection> ptrHttpConnection =
--            boost::shared_static_cast<HttpConnection>(ptrConnection);
-+            boost::static_pointer_cast<HttpConnection>(ptrConnection);
- 
-       if (!authenticate(ptrHttpConnection))
-       {
diff --git a/sci-mathematics/rstudio/files/rstudio-0.97.336-linker_flags.patch b/sci-mathematics/rstudio/files/rstudio-0.97.336-linker_flags.patch
deleted file mode 100644
index a336fccbc981..000000000000
--- a/sci-mathematics/rstudio/files/rstudio-0.97.336-linker_flags.patch
+++ /dev/null
@@ -1,18 +0,0 @@
-Some gcc hardening options were added, however since we add
-"-Wl,--as-needed" we end up with "-Wl,--as-needed;-Wl,-z,relro" which
-leads to linker errors about unknown options, if we make it so the
-as-needed option is the last option on the line, everything is fine.
-
-diff --git a/src/cpp/CMakeLists.txt b/src/cpp/CMakeLists.txt
-index 0589ca0..fe5bd5f 100644
---- a/src/cpp/CMakeLists.txt
-+++ b/src/cpp/CMakeLists.txt
-@@ -57,7 +57,7 @@ if(UNIX)
-       add_definitions(-D_FORTIFY_SOURCE=2)
-       add_definitions(-fstack-protector --param ssp-buffer-size=4)
-       add_definitions(-pie -fPIE)
--      set(CMAKE_EXE_LINKER_FLAGS "${CMAKE_EXE_LINKER_FLAGS} -Wl,-z,relro,-z,now")
-+      set(CMAKE_EXE_LINKER_FLAGS "-Wl,-z,relro,-z,now ${CMAKE_EXE_LINKER_FLAGS}")
-    endif()
- 
- # Win32 specific global directives
diff --git a/sci-mathematics/rstudio/files/rstudio-0.97.336-paths.patch b/sci-mathematics/rstudio/files/rstudio-0.97.336-paths.patch
deleted file mode 100644
index 7b44374a72d2..000000000000
--- a/sci-mathematics/rstudio/files/rstudio-0.97.336-paths.patch
+++ /dev/null
@@ -1,112 +0,0 @@
-change the install path, as by default everything is dumped right under
-the prefix. After fixing install paths, now fix the source so the
-program can find the moved resources.
-	
-diff --git a/CMakeGlobals.txt b/CMakeGlobals.txt
-index da74970..1537bff 100644
---- a/CMakeGlobals.txt
-+++ b/CMakeGlobals.txt
-@@ -103,7 +103,7 @@ else()
-    else()
-      set(RSTUDIO_INSTALL_BIN bin)
-    endif()
--   set(RSTUDIO_INSTALL_SUPPORTING .)
-+   set(RSTUDIO_INSTALL_SUPPORTING ${DISTRO_SHARE})
- endif()
- 
- # if the install prefix is /usr/local then tweak as appropriate
-diff --git a/src/cpp/server/CMakeLists.txt b/src/cpp/server/CMakeLists.txt
-index af4db1c..96b767e 100644
---- a/src/cpp/server/CMakeLists.txt
-+++ b/src/cpp/server/CMakeLists.txt
-@@ -142,7 +142,7 @@ if (UNIX AND NOT APPLE)
-    configure_file(${CMAKE_CURRENT_SOURCE_DIR}/${RSERVER_INITD_DEBIAN_SCRIPT}.in
-                   ${CMAKE_CURRENT_BINARY_DIR}/${RSERVER_INITD_DEBIAN_SCRIPT})
-    install(PROGRAMS ${CMAKE_CURRENT_BINARY_DIR}/${RSERVER_INITD_DEBIAN_SCRIPT}
--           DESTINATION ${RSERVER_INITD_DEBIAN_DIR})
-+           DESTINATION ${DISTRO_SHARE}/${RSERVER_INITD_DEBIAN_DIR})
- 
-    # install configured redhat init.d script
-    set(RSERVER_INITD_REDHAT_DIR "extras/init.d/redhat")
-@@ -150,7 +150,7 @@ if (UNIX AND NOT APPLE)
-    configure_file(${CMAKE_CURRENT_SOURCE_DIR}/${RSERVER_INITD_REDHAT_SCRIPT}.in
-                   ${CMAKE_CURRENT_BINARY_DIR}/${RSERVER_INITD_REDHAT_SCRIPT})
-    install(PROGRAMS ${CMAKE_CURRENT_BINARY_DIR}/${RSERVER_INITD_REDHAT_SCRIPT}
--           DESTINATION ${RSERVER_INITD_REDHAT_DIR})
-+           DESTINATION ${DISTRO_SHARE}/${RSERVER_INITD_REDHAT_DIR})
- 
-    # install configured suse init.d script
-    set(RSERVER_INITD_SUSE_DIR "extras/init.d/suse")
-@@ -158,13 +158,13 @@ if (UNIX AND NOT APPLE)
-    configure_file(${CMAKE_CURRENT_SOURCE_DIR}/${RSERVER_INITD_SUSE_SCRIPT}.in
-                   ${CMAKE_CURRENT_BINARY_DIR}/${RSERVER_INITD_SUSE_SCRIPT})
-    install(PROGRAMS ${CMAKE_CURRENT_BINARY_DIR}/${RSERVER_INITD_SUSE_SCRIPT}
--           DESTINATION ${RSERVER_INITD_SUSE_DIR})
-+           DESTINATION ${DISTRO_SHARE}/${RSERVER_INITD_SUSE_DIR})
- 
-    # install pam profile
-    set(RSERVER_PAM_DIR "extras/pam")
-    set(RSERVER_PAM_PROFILE "${RSERVER_PAM_DIR}/rstudio")
-    install(FILES ${CMAKE_CURRENT_SOURCE_DIR}/${RSERVER_PAM_PROFILE}
--           DESTINATION ${RSERVER_PAM_DIR})
-+           DESTINATION ${DISTRO_SHARE}/${RSERVER_PAM_DIR})
- 
-    # install configured apparmor profile
-    set(RSERVER_APPARMOR_DIR "extras/apparmor")
-@@ -172,9 +172,9 @@ if (UNIX AND NOT APPLE)
-    configure_file(${CMAKE_CURRENT_SOURCE_DIR}/${RSERVER_APPARMOR_PROFILE}.in
-                   ${CMAKE_CURRENT_BINARY_DIR}/${RSERVER_APPARMOR_PROFILE})
-    install(FILES ${CMAKE_CURRENT_BINARY_DIR}/${RSERVER_APPARMOR_PROFILE}
--           DESTINATION ${RSERVER_APPARMOR_DIR})
-+           DESTINATION ${DISTRO_SHARE}/${RSERVER_APPARMOR_DIR})
-    install(PROGRAMS ${CMAKE_CURRENT_SOURCE_DIR}/${RSERVER_APPARMOR_DIR}/apparmor-profile-load
--           DESTINATION ${RSERVER_APPARMOR_DIR})
-+           DESTINATION ${DISTRO_SHARE}/${RSERVER_APPARMOR_DIR})
- 
-    # install configured upstart profile
-    set(RSERVER_UPSTART_DIR "extras/upstart")
-@@ -182,6 +182,6 @@ if (UNIX AND NOT APPLE)
-    configure_file(${CMAKE_CURRENT_SOURCE_DIR}/${RSERVER_UPSTART_PROFILE}.in
-                   ${CMAKE_CURRENT_BINARY_DIR}/${RSERVER_UPSTART_PROFILE})
-    install(FILES ${CMAKE_CURRENT_BINARY_DIR}/${RSERVER_UPSTART_PROFILE}
--           DESTINATION ${RSERVER_UPSTART_DIR})
-+           DESTINATION ${DISTRO_SHARE}/${RSERVER_UPSTART_DIR})
- 
- endif()
-diff --git a/src/cpp/server/ServerOptions.cpp b/src/cpp/server/ServerOptions.cpp
-index 77a63f1..f0d25f0 100644
---- a/src/cpp/server/ServerOptions.cpp
-+++ b/src/cpp/server/ServerOptions.cpp
-@@ -201,7 +201,7 @@ ProgramStatus Options::read(int argc, char * const argv[])
- 
-    // convert relative paths by completing from the system installation
-    // path (this allows us to be relocatable)
--   resolvePath(installPath, &wwwLocalPath_);
-+   resolvePath(installPath.childPath(DISTRO_SHARE), &wwwLocalPath_);
-    resolvePath(installPath, &authPamHelperPath_);
-    resolvePath(installPath, &rsessionPath_);
-    resolvePath(installPath, &rldpathPath_);
-diff --git a/src/cpp/session/SessionOptions.cpp b/src/cpp/session/SessionOptions.cpp
-index 0df1081..777cc6a 100644
---- a/src/cpp/session/SessionOptions.cpp
-+++ b/src/cpp/session/SessionOptions.cpp
-@@ -333,12 +333,12 @@ core::ProgramStatus Options::read(int argc, char * const argv[])
- 
-    // convert relative paths by completing from the app resource path
--   resolvePath(resourcePath, &rResourcesPath_);
-+   resolvePath(resourcePath.childPath(DISTRO_SHARE), &rResourcesPath_);
-    resolvePath(resourcePath, &agreementFilePath_);
--   resolvePath(resourcePath, &wwwLocalPath_);
--   resolvePath(resourcePath, &coreRSourcePath_);
--   resolvePath(resourcePath, &modulesRSourcePath_);
--   resolvePath(resourcePath, &sessionLibraryPath_);
--   resolvePath(resourcePath, &sessionPackagesPath_);
-+   resolvePath(resourcePath.childPath(DISTRO_SHARE), &wwwLocalPath_);
-+   resolvePath(resourcePath.childPath(DISTRO_SHARE), &coreRSourcePath_);
-+   resolvePath(resourcePath.childPath(DISTRO_SHARE), &modulesRSourcePath_);
-+   resolvePath(resourcePath.childPath(DISTRO_SHARE), &sessionLibraryPath_);
-+   resolvePath(resourcePath.childPath(DISTRO_SHARE), &sessionPackagesPath_);
-    resolvePostbackPath(resourcePath, &rpostbackPath_);
- #ifdef _WIN32
-    resolvePath(resourcePath, &consoleIoPath_);
-
diff --git a/sci-mathematics/rstudio/files/rstudio-0.97.336-prefs.patch b/sci-mathematics/rstudio/files/rstudio-0.97.336-prefs.patch
deleted file mode 100644
index 3175d47235ab..000000000000
--- a/sci-mathematics/rstudio/files/rstudio-0.97.336-prefs.patch
+++ /dev/null
@@ -1,24 +0,0 @@
-And now we fix src/gwt/build.xml since java's user preference class is
-braindead and insists on writing where it is not allowed.
-much thanks to http://www.allaboutbalance.com/articles/disableprefs/
-
-diff --git a/src/gwt/build.xml b/src/gwt/build.xml
-index e7d2418..ae3a331 100644
---- a/src/gwt/build.xml
-+++ b/src/gwt/build.xml
-@@ -25,6 +25,7 @@
-    <property name="gwt.extra.args" value=""/>
-    <property name="gwt.main.module" value="org.rstudio.studio.RStudio"/>
-    <property name="ace.bin" value="src/org/rstudio/studio/client/workbench/views/source/editors/text/ace"/>
-+   <property environment="env"/>
- 
-    <path id="project.class.path">
-       <pathelement location="bin"/>
-@@ -109,6 +110,7 @@
-          </classpath>
-          <!-- add jvmarg -Xss16M or similar if you see a StackOverflowError -->
-          <jvmarg value="-Xmx1024M"/>
-+         <jvmarg value="-Djava.util.prefs.userRoot=${env.T}"/>
-          <arg value="-war"/>
-          <arg value="www"/>
-          <arg value="-localWorkers"/>
diff --git a/sci-mathematics/rstudio/files/rstudio-0.97.551-boost-1.53.patch b/sci-mathematics/rstudio/files/rstudio-0.97.551-boost-1.53.patch
deleted file mode 100644
index 38bb63a8ab61..000000000000
--- a/sci-mathematics/rstudio/files/rstudio-0.97.551-boost-1.53.patch
+++ /dev/null
@@ -1,64 +0,0 @@
-=== modified file 'src/cpp/core/include/core/http/AsyncServer.hpp'
---- src/cpp/core/include/core/http/AsyncServer.hpp	2013-07-09 12:02:58 +0000
-+++ src/cpp/core/include/core/http/AsyncServer.hpp	2013-07-09 12:03:34 +0000
-@@ -264,7 +264,7 @@
-          
-          // convert to cannonical HttpConnection
-          boost::shared_ptr<AsyncConnection> pAsyncConnection =
--             boost::shared_static_cast<AsyncConnection>(pConnection);
-+             boost::static_pointer_cast<AsyncConnection>(pConnection);
- 
-          // call the appropriate handler to generate a response
-          std::string uri = pRequest->uri();
-
-=== modified file 'src/cpp/core/include/core/http/LocalStreamAsyncClient.hpp'
---- src/cpp/core/include/core/http/LocalStreamAsyncClient.hpp	2013-07-09 12:02:58 +0000
-+++ src/cpp/core/include/core/http/LocalStreamAsyncClient.hpp	2013-07-09 12:03:36 +0000
-@@ -87,7 +87,7 @@
-       boost::shared_ptr<AsyncClient<boost::asio::local::stream_protocol::socket> >
-                                     ptrShared = shared_from_this();
- 
--      return boost::shared_static_cast<LocalStreamAsyncClient>(ptrShared);
-+      return boost::static_pointer_cast<LocalStreamAsyncClient>(ptrShared);
-    }
- 
- private:
-
-=== modified file 'src/cpp/core/include/core/http/TcpIpAsyncClient.hpp'
---- src/cpp/core/include/core/http/TcpIpAsyncClient.hpp	2013-07-09 12:02:58 +0000
-+++ src/cpp/core/include/core/http/TcpIpAsyncClient.hpp	2013-07-09 12:03:32 +0000
-@@ -74,7 +74,7 @@
-       boost::shared_ptr<AsyncClient<boost::asio::ip::tcp::socket> > ptrShared
-                                                 = shared_from_this();
- 
--      return boost::shared_static_cast<TcpIpAsyncClient>(ptrShared);
-+      return boost::static_pointer_cast<TcpIpAsyncClient>(ptrShared);
-    }
- 
- private:
-
-=== modified file 'src/cpp/core/include/core/http/TcpIpAsyncClientSsl.hpp'
---- src/cpp/core/include/core/http/TcpIpAsyncClientSsl.hpp	2013-07-09 12:02:58 +0000
-+++ src/cpp/core/include/core/http/TcpIpAsyncClientSsl.hpp	2013-07-09 12:03:39 +0000
-@@ -109,7 +109,7 @@
-       boost::shared_ptr<AsyncClient<boost::asio::ssl::stream<boost::asio::ip::tcp::socket> > > ptrShared
-                                                  = shared_from_this();
- 
--      return boost::shared_static_cast<TcpIpAsyncClientSsl>(ptrShared);
-+      return boost::static_pointer_cast<TcpIpAsyncClientSsl>(ptrShared);
-    }
- 
-    virtual bool isShutdownError(const boost::system::error_code& ec)
-
-=== modified file 'src/cpp/session/http/SessionHttpConnectionListenerImpl.hpp'
---- src/cpp/session/http/SessionHttpConnectionListenerImpl.hpp	2013-07-09 12:02:58 +0000
-+++ src/cpp/session/http/SessionHttpConnectionListenerImpl.hpp	2013-07-09 12:03:29 +0000
-@@ -256,7 +256,7 @@
-    {
-       // convert to cannonical HttpConnection
-       boost::shared_ptr<HttpConnection> ptrHttpConnection =
--            boost::shared_static_cast<HttpConnection>(ptrConnection);
-+            boost::static_pointer_cast<HttpConnection>(ptrConnection);
- 
-       if (!authenticate(ptrHttpConnection))
-       {
diff --git a/sci-mathematics/rstudio/files/rstudio-0.97.551-linker_flags.patch b/sci-mathematics/rstudio/files/rstudio-0.97.551-linker_flags.patch
deleted file mode 100644
index a336fccbc981..000000000000
--- a/sci-mathematics/rstudio/files/rstudio-0.97.551-linker_flags.patch
+++ /dev/null
@@ -1,18 +0,0 @@
-Some gcc hardening options were added, however since we add
-"-Wl,--as-needed" we end up with "-Wl,--as-needed;-Wl,-z,relro" which
-leads to linker errors about unknown options, if we make it so the
-as-needed option is the last option on the line, everything is fine.
-
-diff --git a/src/cpp/CMakeLists.txt b/src/cpp/CMakeLists.txt
-index 0589ca0..fe5bd5f 100644
---- a/src/cpp/CMakeLists.txt
-+++ b/src/cpp/CMakeLists.txt
-@@ -57,7 +57,7 @@ if(UNIX)
-       add_definitions(-D_FORTIFY_SOURCE=2)
-       add_definitions(-fstack-protector --param ssp-buffer-size=4)
-       add_definitions(-pie -fPIE)
--      set(CMAKE_EXE_LINKER_FLAGS "${CMAKE_EXE_LINKER_FLAGS} -Wl,-z,relro,-z,now")
-+      set(CMAKE_EXE_LINKER_FLAGS "-Wl,-z,relro,-z,now ${CMAKE_EXE_LINKER_FLAGS}")
-    endif()
- 
- # Win32 specific global directives
diff --git a/sci-mathematics/rstudio/files/rstudio-0.97.551-paths.patch b/sci-mathematics/rstudio/files/rstudio-0.97.551-paths.patch
deleted file mode 100644
index 7b44374a72d2..000000000000
--- a/sci-mathematics/rstudio/files/rstudio-0.97.551-paths.patch
+++ /dev/null
@@ -1,112 +0,0 @@
-change the install path, as by default everything is dumped right under
-the prefix. After fixing install paths, now fix the source so the
-program can find the moved resources.
-	
-diff --git a/CMakeGlobals.txt b/CMakeGlobals.txt
-index da74970..1537bff 100644
---- a/CMakeGlobals.txt
-+++ b/CMakeGlobals.txt
-@@ -103,7 +103,7 @@ else()
-    else()
-      set(RSTUDIO_INSTALL_BIN bin)
-    endif()
--   set(RSTUDIO_INSTALL_SUPPORTING .)
-+   set(RSTUDIO_INSTALL_SUPPORTING ${DISTRO_SHARE})
- endif()
- 
- # if the install prefix is /usr/local then tweak as appropriate
-diff --git a/src/cpp/server/CMakeLists.txt b/src/cpp/server/CMakeLists.txt
-index af4db1c..96b767e 100644
---- a/src/cpp/server/CMakeLists.txt
-+++ b/src/cpp/server/CMakeLists.txt
-@@ -142,7 +142,7 @@ if (UNIX AND NOT APPLE)
-    configure_file(${CMAKE_CURRENT_SOURCE_DIR}/${RSERVER_INITD_DEBIAN_SCRIPT}.in
-                   ${CMAKE_CURRENT_BINARY_DIR}/${RSERVER_INITD_DEBIAN_SCRIPT})
-    install(PROGRAMS ${CMAKE_CURRENT_BINARY_DIR}/${RSERVER_INITD_DEBIAN_SCRIPT}
--           DESTINATION ${RSERVER_INITD_DEBIAN_DIR})
-+           DESTINATION ${DISTRO_SHARE}/${RSERVER_INITD_DEBIAN_DIR})
- 
-    # install configured redhat init.d script
-    set(RSERVER_INITD_REDHAT_DIR "extras/init.d/redhat")
-@@ -150,7 +150,7 @@ if (UNIX AND NOT APPLE)
-    configure_file(${CMAKE_CURRENT_SOURCE_DIR}/${RSERVER_INITD_REDHAT_SCRIPT}.in
-                   ${CMAKE_CURRENT_BINARY_DIR}/${RSERVER_INITD_REDHAT_SCRIPT})
-    install(PROGRAMS ${CMAKE_CURRENT_BINARY_DIR}/${RSERVER_INITD_REDHAT_SCRIPT}
--           DESTINATION ${RSERVER_INITD_REDHAT_DIR})
-+           DESTINATION ${DISTRO_SHARE}/${RSERVER_INITD_REDHAT_DIR})
- 
-    # install configured suse init.d script
-    set(RSERVER_INITD_SUSE_DIR "extras/init.d/suse")
-@@ -158,13 +158,13 @@ if (UNIX AND NOT APPLE)
-    configure_file(${CMAKE_CURRENT_SOURCE_DIR}/${RSERVER_INITD_SUSE_SCRIPT}.in
-                   ${CMAKE_CURRENT_BINARY_DIR}/${RSERVER_INITD_SUSE_SCRIPT})
-    install(PROGRAMS ${CMAKE_CURRENT_BINARY_DIR}/${RSERVER_INITD_SUSE_SCRIPT}
--           DESTINATION ${RSERVER_INITD_SUSE_DIR})
-+           DESTINATION ${DISTRO_SHARE}/${RSERVER_INITD_SUSE_DIR})
- 
-    # install pam profile
-    set(RSERVER_PAM_DIR "extras/pam")
-    set(RSERVER_PAM_PROFILE "${RSERVER_PAM_DIR}/rstudio")
-    install(FILES ${CMAKE_CURRENT_SOURCE_DIR}/${RSERVER_PAM_PROFILE}
--           DESTINATION ${RSERVER_PAM_DIR})
-+           DESTINATION ${DISTRO_SHARE}/${RSERVER_PAM_DIR})
- 
-    # install configured apparmor profile
-    set(RSERVER_APPARMOR_DIR "extras/apparmor")
-@@ -172,9 +172,9 @@ if (UNIX AND NOT APPLE)
-    configure_file(${CMAKE_CURRENT_SOURCE_DIR}/${RSERVER_APPARMOR_PROFILE}.in
-                   ${CMAKE_CURRENT_BINARY_DIR}/${RSERVER_APPARMOR_PROFILE})
-    install(FILES ${CMAKE_CURRENT_BINARY_DIR}/${RSERVER_APPARMOR_PROFILE}
--           DESTINATION ${RSERVER_APPARMOR_DIR})
-+           DESTINATION ${DISTRO_SHARE}/${RSERVER_APPARMOR_DIR})
-    install(PROGRAMS ${CMAKE_CURRENT_SOURCE_DIR}/${RSERVER_APPARMOR_DIR}/apparmor-profile-load
--           DESTINATION ${RSERVER_APPARMOR_DIR})
-+           DESTINATION ${DISTRO_SHARE}/${RSERVER_APPARMOR_DIR})
- 
-    # install configured upstart profile
-    set(RSERVER_UPSTART_DIR "extras/upstart")
-@@ -182,6 +182,6 @@ if (UNIX AND NOT APPLE)
-    configure_file(${CMAKE_CURRENT_SOURCE_DIR}/${RSERVER_UPSTART_PROFILE}.in
-                   ${CMAKE_CURRENT_BINARY_DIR}/${RSERVER_UPSTART_PROFILE})
-    install(FILES ${CMAKE_CURRENT_BINARY_DIR}/${RSERVER_UPSTART_PROFILE}
--           DESTINATION ${RSERVER_UPSTART_DIR})
-+           DESTINATION ${DISTRO_SHARE}/${RSERVER_UPSTART_DIR})
- 
- endif()
-diff --git a/src/cpp/server/ServerOptions.cpp b/src/cpp/server/ServerOptions.cpp
-index 77a63f1..f0d25f0 100644
---- a/src/cpp/server/ServerOptions.cpp
-+++ b/src/cpp/server/ServerOptions.cpp
-@@ -201,7 +201,7 @@ ProgramStatus Options::read(int argc, char * const argv[])
- 
-    // convert relative paths by completing from the system installation
-    // path (this allows us to be relocatable)
--   resolvePath(installPath, &wwwLocalPath_);
-+   resolvePath(installPath.childPath(DISTRO_SHARE), &wwwLocalPath_);
-    resolvePath(installPath, &authPamHelperPath_);
-    resolvePath(installPath, &rsessionPath_);
-    resolvePath(installPath, &rldpathPath_);
-diff --git a/src/cpp/session/SessionOptions.cpp b/src/cpp/session/SessionOptions.cpp
-index 0df1081..777cc6a 100644
---- a/src/cpp/session/SessionOptions.cpp
-+++ b/src/cpp/session/SessionOptions.cpp
-@@ -333,12 +333,12 @@ core::ProgramStatus Options::read(int argc, char * const argv[])
- 
-    // convert relative paths by completing from the app resource path
--   resolvePath(resourcePath, &rResourcesPath_);
-+   resolvePath(resourcePath.childPath(DISTRO_SHARE), &rResourcesPath_);
-    resolvePath(resourcePath, &agreementFilePath_);
--   resolvePath(resourcePath, &wwwLocalPath_);
--   resolvePath(resourcePath, &coreRSourcePath_);
--   resolvePath(resourcePath, &modulesRSourcePath_);
--   resolvePath(resourcePath, &sessionLibraryPath_);
--   resolvePath(resourcePath, &sessionPackagesPath_);
-+   resolvePath(resourcePath.childPath(DISTRO_SHARE), &wwwLocalPath_);
-+   resolvePath(resourcePath.childPath(DISTRO_SHARE), &coreRSourcePath_);
-+   resolvePath(resourcePath.childPath(DISTRO_SHARE), &modulesRSourcePath_);
-+   resolvePath(resourcePath.childPath(DISTRO_SHARE), &sessionLibraryPath_);
-+   resolvePath(resourcePath.childPath(DISTRO_SHARE), &sessionPackagesPath_);
-    resolvePostbackPath(resourcePath, &rpostbackPath_);
- #ifdef _WIN32
-    resolvePath(resourcePath, &consoleIoPath_);
-
diff --git a/sci-mathematics/rstudio/files/rstudio-0.97.551-prefs.patch b/sci-mathematics/rstudio/files/rstudio-0.97.551-prefs.patch
deleted file mode 100644
index 3175d47235ab..000000000000
--- a/sci-mathematics/rstudio/files/rstudio-0.97.551-prefs.patch
+++ /dev/null
@@ -1,24 +0,0 @@
-And now we fix src/gwt/build.xml since java's user preference class is
-braindead and insists on writing where it is not allowed.
-much thanks to http://www.allaboutbalance.com/articles/disableprefs/
-
-diff --git a/src/gwt/build.xml b/src/gwt/build.xml
-index e7d2418..ae3a331 100644
---- a/src/gwt/build.xml
-+++ b/src/gwt/build.xml
-@@ -25,6 +25,7 @@
-    <property name="gwt.extra.args" value=""/>
-    <property name="gwt.main.module" value="org.rstudio.studio.RStudio"/>
-    <property name="ace.bin" value="src/org/rstudio/studio/client/workbench/views/source/editors/text/ace"/>
-+   <property environment="env"/>
- 
-    <path id="project.class.path">
-       <pathelement location="bin"/>
-@@ -109,6 +110,7 @@
-          </classpath>
-          <!-- add jvmarg -Xss16M or similar if you see a StackOverflowError -->
-          <jvmarg value="-Xmx1024M"/>
-+         <jvmarg value="-Djava.util.prefs.userRoot=${env.T}"/>
-          <arg value="-war"/>
-          <arg value="www"/>
-          <arg value="-localWorkers"/>
diff --git a/sci-mathematics/rstudio/rstudio-0.97.336.ebuild b/sci-mathematics/rstudio/rstudio-0.97.336.ebuild
deleted file mode 100644
index e10f30a21ca6..000000000000
--- a/sci-mathematics/rstudio/rstudio-0.97.336.ebuild
+++ /dev/null
@@ -1,143 +0,0 @@
-# Copyright 1999-2016 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-inherit eutils user cmake-utils gnome2-utils pam versionator fdo-mime java-pkg-2 pax-utils
-
-# TODO
-# * package gin and gwt
-# * use dict from tree, linguas
-# * do src_test (use junit from tree?)
-# * fix the about/help/menu and get rid of license
-
-GWTVER=2.5.0.rc1
-GINVER=1.5
-
-DESCRIPTION="IDE for the R language"
-HOMEPAGE="http://www.rstudio.org"
-SRC_URI="
-	https://github.com/rstudio/rstudio/archive/v${PV}.tar.gz -> ${P}.tar.gz
-	https://s3.amazonaws.com/rstudio-buildtools/gin-${GINVER}.zip
-	https://s3.amazonaws.com/rstudio-buildtools/gwt-${GWTVER}.zip
-	https://s3.amazonaws.com/rstudio-dictionaries/core-dictionaries.zip"
-
-LICENSE="AGPL-3"
-SLOT="0"
-KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
-IUSE="dedicated server"
-
-QTVER=4.8
-QTSLOT=4
-RDEPEND="
-	>=dev-lang/R-2.11.1
-	>=dev-libs/boost-1.50:=
-	dev-libs/mathjax
-	dev-libs/openssl:0
-	>=virtual/jre-1.5:=
-	x11-libs/pango
-	!dedicated? (
-		>=dev-qt/qtcore-${QTVER}:${QTSLOT}
-		>=dev-qt/qtdbus-${QTVER}:${QTSLOT}
-		>=dev-qt/qtgui-${QTVER}:${QTSLOT}
-		>=dev-qt/qtwebkit-${QTVER}:${QTSLOT}
-		>=dev-qt/qtxmlpatterns-${QTVER}:${QTSLOT}
-		server? ( virtual/pam )
-	)
-	dedicated? ( virtual/pam )"
-DEPEND="${RDEPEND}
-	app-arch/unzip
-	dev-java/ant-core
-	>=virtual/jdk-1.5
-	virtual/pkgconfig"
-#	test? ( dev-java/junit:4 )
-
-src_unpack() {
-	unpack ${P}.tar.gz gwt-${GWTVER}.zip
-	cd "${S}" || die
-	mkdir -p src/gwt/lib/{gin,gwt} dependencies/common/dictionaries || die
-	mv ../gwt-${GWTVER} src/gwt/lib/gwt/${GWTVER} || die
-	unzip -qd src/gwt/lib/gin/${GINVER} "${DISTDIR}"/gin-${GINVER}.zip || die
-	unzip -qd dependencies/common/dictionaries "${DISTDIR}"/core-dictionaries.zip || die
-}
-
-src_prepare() {
-	java-pkg-2_src_prepare
-
-	egit_clean
-
-	epatch \
-		"${FILESDIR}"/${P}-prefs.patch \
-		"${FILESDIR}"/${P}-paths.patch \
-		"${FILESDIR}"/${P}-linker_flags.patch \
-		"${FILESDIR}"/${P}-boost-1.53.patch
-
-	# Adding -DDISTRO_SHARE=... to append-flags breaks cmake so using
-	# this sed hack for now. ~RMH
-	sed -i \
-		-e "s|DISTRO_SHARE|\"share/${PN}\"|g" \
-		src/cpp/server/ServerOptions.cpp \
-		src/cpp/session/SessionOptions.cpp || die
-
-	# use mathjax from system
-	ln -sf "${EPREFIX}"/usr/share/mathjax dependencies/common/mathjax || die
-
-	# make sure icons and mime stuff are with prefix
-	sed -i \
-		-e "s:/usr:${EPREFIX}/usr:g" \
-		CMakeGlobals.txt src/cpp/desktop/CMakeLists.txt || die
-
-	# specify that namespace core the is in the global namespace and not
-	# relative to some other namespace (like its ::core not ::boost::core)
-	find . \( -name *.cpp -or -name *.hpp \) -exec sed \
-		-e 's@<core::@< ::core::@g' -e 's@\([^:]\)core::@\1::core::@g' -i {} \;
-}
-
-src_configure() {
-	export RSTUDIO_VERSION_MAJOR=$(get_version_component_range 1)
-	export RSTUDIO_VERSION_MINOR=$(get_version_component_range 2)
-	export RSTUDIO_VERSION_PATCH=$(get_version_component_range 3)
-
-	local mycmakeargs=(
-		-DDISTRO_SHARE=share/${PN}
-		$(cmake-utils_use !dedicated RSTUDIO_INSTALL_FREEDESKTOP)
-		-DRSTUDIO_TARGET=$(usex dedicated "Server" "$(usex server "All" "Desktop")")
-		)
-
-	cmake-utils_src_configure
-}
-
-src_compile() {
-	cmake-utils_src_compile
-}
-
-src_install() {
-	cmake-utils_src_install
-	pax-mark m "${ED}usr/bin/rstudio"
-	if use dedicated || use server; then
-		dopamd src/cpp/server/extras/pam/rstudio
-		newinitd "${FILESDIR}"/rstudio-server.initd rstudio-server
-	fi
-}
-
-pkg_preinst() {
-	use dedicated || gnome2_icon_savelist
-	java-pkg-2_pkg_preinst
-}
-
-pkg_postinst() {
-	use dedicated || { fdo-mime_desktop_database_update
-		fdo-mime_mime_database_update
-		gnome2_icon_cache_update ;}
-
-	if use dedicated || use server; then
-		enewgroup rstudio-server
-		enewuser rstudio-server -1 -1 -1 rstudio-server
-	fi
-}
-
-pkg_postrm() {
-	use dedicated || { fdo-mime_desktop_database_update
-		fdo-mime_mime_database_update
-		gnome2_icon_cache_update ;}
-}
diff --git a/sci-mathematics/rstudio/rstudio-0.97.551.ebuild b/sci-mathematics/rstudio/rstudio-0.97.551.ebuild
deleted file mode 100644
index e10f30a21ca6..000000000000
--- a/sci-mathematics/rstudio/rstudio-0.97.551.ebuild
+++ /dev/null
@@ -1,143 +0,0 @@
-# Copyright 1999-2016 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-inherit eutils user cmake-utils gnome2-utils pam versionator fdo-mime java-pkg-2 pax-utils
-
-# TODO
-# * package gin and gwt
-# * use dict from tree, linguas
-# * do src_test (use junit from tree?)
-# * fix the about/help/menu and get rid of license
-
-GWTVER=2.5.0.rc1
-GINVER=1.5
-
-DESCRIPTION="IDE for the R language"
-HOMEPAGE="http://www.rstudio.org"
-SRC_URI="
-	https://github.com/rstudio/rstudio/archive/v${PV}.tar.gz -> ${P}.tar.gz
-	https://s3.amazonaws.com/rstudio-buildtools/gin-${GINVER}.zip
-	https://s3.amazonaws.com/rstudio-buildtools/gwt-${GWTVER}.zip
-	https://s3.amazonaws.com/rstudio-dictionaries/core-dictionaries.zip"
-
-LICENSE="AGPL-3"
-SLOT="0"
-KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
-IUSE="dedicated server"
-
-QTVER=4.8
-QTSLOT=4
-RDEPEND="
-	>=dev-lang/R-2.11.1
-	>=dev-libs/boost-1.50:=
-	dev-libs/mathjax
-	dev-libs/openssl:0
-	>=virtual/jre-1.5:=
-	x11-libs/pango
-	!dedicated? (
-		>=dev-qt/qtcore-${QTVER}:${QTSLOT}
-		>=dev-qt/qtdbus-${QTVER}:${QTSLOT}
-		>=dev-qt/qtgui-${QTVER}:${QTSLOT}
-		>=dev-qt/qtwebkit-${QTVER}:${QTSLOT}
-		>=dev-qt/qtxmlpatterns-${QTVER}:${QTSLOT}
-		server? ( virtual/pam )
-	)
-	dedicated? ( virtual/pam )"
-DEPEND="${RDEPEND}
-	app-arch/unzip
-	dev-java/ant-core
-	>=virtual/jdk-1.5
-	virtual/pkgconfig"
-#	test? ( dev-java/junit:4 )
-
-src_unpack() {
-	unpack ${P}.tar.gz gwt-${GWTVER}.zip
-	cd "${S}" || die
-	mkdir -p src/gwt/lib/{gin,gwt} dependencies/common/dictionaries || die
-	mv ../gwt-${GWTVER} src/gwt/lib/gwt/${GWTVER} || die
-	unzip -qd src/gwt/lib/gin/${GINVER} "${DISTDIR}"/gin-${GINVER}.zip || die
-	unzip -qd dependencies/common/dictionaries "${DISTDIR}"/core-dictionaries.zip || die
-}
-
-src_prepare() {
-	java-pkg-2_src_prepare
-
-	egit_clean
-
-	epatch \
-		"${FILESDIR}"/${P}-prefs.patch \
-		"${FILESDIR}"/${P}-paths.patch \
-		"${FILESDIR}"/${P}-linker_flags.patch \
-		"${FILESDIR}"/${P}-boost-1.53.patch
-
-	# Adding -DDISTRO_SHARE=... to append-flags breaks cmake so using
-	# this sed hack for now. ~RMH
-	sed -i \
-		-e "s|DISTRO_SHARE|\"share/${PN}\"|g" \
-		src/cpp/server/ServerOptions.cpp \
-		src/cpp/session/SessionOptions.cpp || die
-
-	# use mathjax from system
-	ln -sf "${EPREFIX}"/usr/share/mathjax dependencies/common/mathjax || die
-
-	# make sure icons and mime stuff are with prefix
-	sed -i \
-		-e "s:/usr:${EPREFIX}/usr:g" \
-		CMakeGlobals.txt src/cpp/desktop/CMakeLists.txt || die
-
-	# specify that namespace core the is in the global namespace and not
-	# relative to some other namespace (like its ::core not ::boost::core)
-	find . \( -name *.cpp -or -name *.hpp \) -exec sed \
-		-e 's@<core::@< ::core::@g' -e 's@\([^:]\)core::@\1::core::@g' -i {} \;
-}
-
-src_configure() {
-	export RSTUDIO_VERSION_MAJOR=$(get_version_component_range 1)
-	export RSTUDIO_VERSION_MINOR=$(get_version_component_range 2)
-	export RSTUDIO_VERSION_PATCH=$(get_version_component_range 3)
-
-	local mycmakeargs=(
-		-DDISTRO_SHARE=share/${PN}
-		$(cmake-utils_use !dedicated RSTUDIO_INSTALL_FREEDESKTOP)
-		-DRSTUDIO_TARGET=$(usex dedicated "Server" "$(usex server "All" "Desktop")")
-		)
-
-	cmake-utils_src_configure
-}
-
-src_compile() {
-	cmake-utils_src_compile
-}
-
-src_install() {
-	cmake-utils_src_install
-	pax-mark m "${ED}usr/bin/rstudio"
-	if use dedicated || use server; then
-		dopamd src/cpp/server/extras/pam/rstudio
-		newinitd "${FILESDIR}"/rstudio-server.initd rstudio-server
-	fi
-}
-
-pkg_preinst() {
-	use dedicated || gnome2_icon_savelist
-	java-pkg-2_pkg_preinst
-}
-
-pkg_postinst() {
-	use dedicated || { fdo-mime_desktop_database_update
-		fdo-mime_mime_database_update
-		gnome2_icon_cache_update ;}
-
-	if use dedicated || use server; then
-		enewgroup rstudio-server
-		enewuser rstudio-server -1 -1 -1 rstudio-server
-	fi
-}
-
-pkg_postrm() {
-	use dedicated || { fdo-mime_desktop_database_update
-		fdo-mime_mime_database_update
-		gnome2_icon_cache_update ;}
-}
diff --git a/sci-mathematics/rstudio/rstudio-0.98.1028.ebuild b/sci-mathematics/rstudio/rstudio-0.98.1028.ebuild
deleted file mode 100644
index ebaf1bd04ec1..000000000000
--- a/sci-mathematics/rstudio/rstudio-0.98.1028.ebuild
+++ /dev/null
@@ -1,164 +0,0 @@
-# Copyright 1999-2016 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-inherit eutils cmake-utils gnome2-utils versionator fdo-mime java-pkg-2 pax-utils
-
-# TODO
-# * package gin and gwt
-# * use dict from tree, linguas
-# * do src_test (use junit from tree?)
-
-# update from scripts in dependencies/common
-GWTVER=2.6.0
-GINVER=1.5
-SELENIUMVER=2.37.0
-CHROMEDRIVER_VER=2.7
-PANDOC_VER=1.12.3
-PACKRAT_VER=0.3.0
-RMARKDOWN_VER=0.2.49
-
-DESCRIPTION="IDE for the R language"
-HOMEPAGE="
-	http://www.rstudio.org
-	https://github.com/rstudio/rstudio/"
-SRC_URI="
-	https://github.com/rstudio/rstudio/archive/v${PV}.tar.gz -> ${P}.tar.gz
-	https://s3.amazonaws.com/rstudio-buildtools/gin-${GINVER}.zip
-	https://s3.amazonaws.com/rstudio-buildtools/gwt-${GWTVER}.zip
-	https://s3.amazonaws.com/rstudio-buildtools/selenium-java-${SELENIUMVER}.zip
-	https://s3.amazonaws.com/rstudio-buildtools/selenium-server-standalone-${SELENIUMVER}.jar
-	https://s3.amazonaws.com/rstudio-buildtools/chromedriver-linux
-	https://s3.amazonaws.com/rstudio-dictionaries/core-dictionaries.zip
-	https://dev.gentoo.org/~hasufell/distfiles/packrat_${PACKRAT_VER}.tar.gz
-	https://dev.gentoo.org/~hasufell/distfiles/rmarkdown_${RMARKDOWN_VER}.tar.gz"
-
-LICENSE="AGPL-3"
-SLOT="0"
-KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
-IUSE=""
-
-QTVER=4.8
-QTSLOT=4
-RDEPEND="
-	app-text/pandoc
-	dev-haskell/pandoc-citeproc
-	>=dev-lang/R-2.11.1
-	>=dev-libs/boost-1.50
-	dev-libs/mathjax
-	dev-libs/openssl:0
-	sys-apps/util-linux
-	sys-libs/zlib
-	>=virtual/jre-1.5:=
-	x11-libs/pango
-	>=dev-qt/qtcore-${QTVER}:${QTSLOT}
-	>=dev-qt/qtdbus-${QTVER}:${QTSLOT}
-	>=dev-qt/qtgui-${QTVER}:${QTSLOT}
-	>=dev-qt/qtwebkit-${QTVER}:${QTSLOT}
-	>=dev-qt/qtxmlpatterns-${QTVER}:${QTSLOT}"
-DEPEND="${RDEPEND}
-	app-arch/unzip
-	dev-java/ant-core
-	>=virtual/jdk-1.5
-	virtual/pkgconfig"
-#	test? ( dev-java/junit:4 )
-
-src_unpack() {
-	unpack ${P}.tar.gz gwt-${GWTVER}.zip
-	cd "${S}" || die
-	mkdir -p src/gwt/lib/{gin,gwt} \
-		dependencies/common/dictionaries \
-		src/gwt/lib/selenium/${SELENIUMVER} \
-		src/gwt/lib/selenium/chromedriver/${CHROMEDRIVER_VER} || die
-	mv ../gwt-${GWTVER} src/gwt/lib/gwt/${GWTVER} || die
-	unzip -qd src/gwt/lib/gin/${GINVER} \
-		"${DISTDIR}"/gin-${GINVER}.zip || die
-	unzip -qd dependencies/common/dictionaries \
-		"${DISTDIR}"/core-dictionaries.zip || die
-	unzip -qd src/gwt/lib/selenium/${SELENIUMVER} \
-		"${DISTDIR}"/selenium-java-${SELENIUMVER}.zip || die
-	cp "${DISTDIR}"/selenium-server-standalone-${SELENIUMVER}.jar \
-		src/gwt/lib/selenium/${SELENIUMVER}/ || die
-	cp "${DISTDIR}"/chromedriver-linux \
-		src/gwt/lib/selenium/chromedriver/${CHROMEDRIVER_VER}/ || die
-	cd dependencies/common || die
-	unpack packrat_${PACKRAT_VER}.tar.gz
-	unpack rmarkdown_${RMARKDOWN_VER}.tar.gz
-	cp "${DISTDIR}"/rmarkdown_${RMARKDOWN_VER}.tar.gz \
-		. || die
-	cp "${DISTDIR}"/packrat_${PACKRAT_VER}.tar.gz \
-		. || die
-}
-
-src_prepare() {
-	java-pkg-2_src_prepare
-
-	egit_clean
-
-	epatch \
-		"${FILESDIR}"/${PN}-0.98.490-prefs.patch \
-		"${FILESDIR}"/${PN}-0.98.932-paths.patch \
-		"${FILESDIR}"/${PN}-0.98.932-pandoc.patch \
-		"${FILESDIR}"/${PN}-0.98.490-linker_flags.patch
-
-	# Adding -DDISTRO_SHARE=... to append-flags breaks cmake so using
-	# this sed hack for now. ~RMH
-	sed -i \
-		-e "s|DISTRO_SHARE|\"share/${PN}\"|g" \
-		src/cpp/server/ServerOptions.cpp \
-		src/cpp/session/SessionOptions.cpp || die
-
-	# use mathjax from system
-	ln -sf "${EPREFIX}"/usr/share/mathjax dependencies/common/mathjax || die
-
-	# make sure icons and mime stuff are with prefix
-	sed -i \
-		-e "s:/usr:${EPREFIX}/usr:g" \
-		CMakeGlobals.txt src/cpp/desktop/CMakeLists.txt || die
-
-	# specify that namespace core the is in the global namespace and not
-	# relative to some other namespace (like its ::core not ::boost::core)
-	find . \( -name *.cpp -or -name *.hpp \) -exec sed \
-		-e 's@<core::@< ::core::@g' -e 's@\([^:]\)core::@\1::core::@g' -i {} \;
-}
-
-src_configure() {
-	export RSTUDIO_VERSION_MAJOR=$(get_version_component_range 1)
-	export RSTUDIO_VERSION_MINOR=$(get_version_component_range 2)
-	export RSTUDIO_VERSION_PATCH=$(get_version_component_range 3)
-
-	local mycmakeargs=(
-		-DDISTRO_SHARE=share/${PN}
-		-DRSTUDIO_INSTALL_FREEDESKTOP=ON
-		-DRSTUDIO_TARGET=Desktop
-		)
-
-	cmake-utils_src_configure
-}
-
-src_compile() {
-	cmake-utils_src_compile
-}
-
-src_install() {
-	cmake-utils_src_install
-	pax-mark m "${ED}usr/bin/rstudio"
-}
-
-pkg_preinst() {
-	gnome2_icon_savelist
-	java-pkg-2_pkg_preinst
-}
-
-pkg_postinst() {
-	fdo-mime_desktop_database_update
-	fdo-mime_mime_database_update
-	gnome2_icon_cache_update
-}
-
-pkg_postrm() {
-	fdo-mime_desktop_database_update
-	fdo-mime_mime_database_update
-	gnome2_icon_cache_update
-}
diff --git a/sci-mathematics/rstudio/rstudio-0.98.1091.ebuild b/sci-mathematics/rstudio/rstudio-0.98.1091.ebuild
deleted file mode 100644
index eeda0fd3c15f..000000000000
--- a/sci-mathematics/rstudio/rstudio-0.98.1091.ebuild
+++ /dev/null
@@ -1,198 +0,0 @@
-# Copyright 1999-2016 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-inherit eutils user cmake-utils gnome2-utils pam versionator fdo-mime java-pkg-2 pax-utils
-
-# TODO
-# * package gin and gwt
-# * use dict from tree, linguas
-# * do src_test (use junit from tree?)
-
-# update from scripts in dependencies/common
-GWTVER=2.6.0
-GINVER=1.5
-SELENIUMVER=2.37.0
-CHROMEDRIVER_VER=2.7
-PANDOC_VER=1.12.4.2
-PACKRAT_VER=0.98.1000
-RMARKDOWN_VER=0.98.1000
-SHINYAPPS_VER=0.98.1000
-
-DESCRIPTION="IDE for the R language"
-HOMEPAGE="
-	http://www.rstudio.org
-	https://github.com/rstudio/rstudio/"
-SRC_URI="
-	https://github.com/rstudio/rstudio/archive/v${PV}.tar.gz -> ${P}.tar.gz
-	https://s3.amazonaws.com/rstudio-buildtools/gin-${GINVER}.zip
-	https://s3.amazonaws.com/rstudio-buildtools/gwt-${GWTVER}.zip
-	https://s3.amazonaws.com/rstudio-buildtools/selenium-java-${SELENIUMVER}.zip
-	https://s3.amazonaws.com/rstudio-buildtools/selenium-server-standalone-${SELENIUMVER}.jar
-	https://s3.amazonaws.com/rstudio-buildtools/chromedriver-linux
-	https://s3.amazonaws.com/rstudio-dictionaries/core-dictionaries.zip
-	https://dev.gentoo.org/~gienah/distfiles/packrat-${PACKRAT_VER}.tar.gz
-	https://dev.gentoo.org/~gienah/distfiles/rmarkdown-${RMARKDOWN_VER}.tar.gz
-	https://dev.gentoo.org/~gienah/distfiles/shinyapps-${SHINYAPPS_VER}.tar.gz"
-
-LICENSE="AGPL-3"
-SLOT="0"
-KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
-IUSE="dedicated server"
-
-QTVER=4.8
-QTSLOT=4
-RDEPEND="
-	app-text/pandoc
-	dev-haskell/pandoc-citeproc
-	>=dev-lang/R-2.11.1
-	>=dev-libs/boost-1.50:=
-	>=dev-libs/mathjax-2.3
-	dev-libs/openssl:0
-	sys-apps/util-linux
-	sys-libs/zlib
-	>=virtual/jre-1.5:=
-	x11-libs/pango
-	!dedicated? (
-		>=dev-qt/qtcore-${QTVER}:${QTSLOT}
-		>=dev-qt/qtdbus-${QTVER}:${QTSLOT}
-		>=dev-qt/qtgui-${QTVER}:${QTSLOT}
-		>=dev-qt/qtwebkit-${QTVER}:${QTSLOT}
-		>=dev-qt/qtxmlpatterns-${QTVER}:${QTSLOT}
-		server? ( virtual/pam )
-	)
-	dedicated? ( virtual/pam )"
-DEPEND="${RDEPEND}
-	app-arch/unzip
-	dev-java/ant-core
-	>=virtual/jdk-1.5
-	virtual/pkgconfig"
-#	test? ( dev-java/junit:4 )
-
-src_unpack() {
-	unpack ${P}.tar.gz gwt-${GWTVER}.zip
-	cd "${S}" || die
-	mkdir -p src/gwt/lib/{gin,gwt} \
-		dependencies/common/dictionaries \
-		src/gwt/lib/selenium/${SELENIUMVER} \
-		src/gwt/lib/selenium/chromedriver/${CHROMEDRIVER_VER} || die
-	mv ../gwt-${GWTVER} src/gwt/lib/gwt/${GWTVER} || die
-	unzip -qd src/gwt/lib/gin/${GINVER} \
-		"${DISTDIR}"/gin-${GINVER}.zip || die
-	unzip -qd dependencies/common/dictionaries \
-		"${DISTDIR}"/core-dictionaries.zip || die
-	unzip -qd src/gwt/lib/selenium/${SELENIUMVER} \
-		"${DISTDIR}"/selenium-java-${SELENIUMVER}.zip || die
-	cp "${DISTDIR}"/selenium-server-standalone-${SELENIUMVER}.jar \
-		src/gwt/lib/selenium/${SELENIUMVER}/ || die
-	cp "${DISTDIR}"/chromedriver-linux \
-		src/gwt/lib/selenium/chromedriver/${CHROMEDRIVER_VER}/ || die
-	cd dependencies/common || die
-	unpack packrat-${PACKRAT_VER}.tar.gz
-	unpack rmarkdown-${RMARKDOWN_VER}.tar.gz
-	unpack shinyapps-${RMARKDOWN_VER}.tar.gz
-	cp "${DISTDIR}"/rmarkdown-${RMARKDOWN_VER}.tar.gz \
-		. || die
-	cp "${DISTDIR}"/packrat-${PACKRAT_VER}.tar.gz \
-		. || die
-	cp "${DISTDIR}"/shinyapps-${SHINYAPPS_VER}.tar.gz \
-		. || die
-}
-
-src_prepare() {
-	java-pkg-2_src_prepare
-
-	egit_clean
-
-	epatch \
-		"${FILESDIR}"/${PN}-0.98.490-prefs.patch \
-		"${FILESDIR}"/${PN}-0.98.932-paths.patch \
-		"${FILESDIR}"/${PN}-0.98.1091-pandoc.patch \
-		"${FILESDIR}"/${PN}-0.98.490-linker_flags.patch \
-		"${FILESDIR}"/${PN}-0.98.1091-boost-1.57.patch
-
-	# Adding -DDISTRO_SHARE=... to append-flags breaks cmake so using
-	# this sed hack for now. ~RMH
-	sed -i \
-		-e "s|DISTRO_SHARE|\"share/${PN}\"|g" \
-		src/cpp/server/ServerOptions.cpp \
-		src/cpp/session/SessionOptions.cpp || die
-
-	# use mathjax from system
-	ln -sf "${EPREFIX}"/usr/share/mathjax dependencies/common/mathjax-23 || die
-
-	# make sure icons and mime stuff are with prefix
-	sed -i \
-		-e "s:/usr:${EPREFIX}/usr:g" \
-		CMakeGlobals.txt src/cpp/desktop/CMakeLists.txt || die
-
-	# specify that namespace core the is in the global namespace and not
-	# relative to some other namespace (like its ::core not ::boost::core)
-	find . \( -name *.cpp -or -name *.hpp \) -exec sed \
-		 -e 's@<core::@< ::core::@g' -e 's@\([^:]\)core::@\1::core::@g' -i {} \;
-
-	# On Gentoo the rstudio-server configuration file is /etc/conf.d/rstudio-server.conf
-	sed -e "s@/etc/rstudio/rserver.conf@${EROOT}etc/conf.d/rstudio-server.conf@" \
-		-i src/cpp/server/ServerOptions.cpp \
-		|| die
-
-	# Set the rsession.conf file location for Gentoo prefix
-	sed -e "s@/etc/rstudio/rsession.conf@${EROOT}etc/rstudio/rsession.conf@" \
-		-i src/cpp/session/SessionOptions.cpp \
-		|| die
-}
-
-src_configure() {
-	export RSTUDIO_VERSION_MAJOR=$(get_version_component_range 1)
-	export RSTUDIO_VERSION_MINOR=$(get_version_component_range 2)
-	export RSTUDIO_VERSION_PATCH=$(get_version_component_range 3)
-
-	local mycmakeargs=(
-		-DDISTRO_SHARE=share/${PN}
-		$(cmake-utils_use !dedicated RSTUDIO_INSTALL_FREEDESKTOP)
-		-DRSTUDIO_TARGET=$(usex dedicated "Server" "$(usex server "Development" "Desktop")")
-		)
-
-	cmake-utils_src_configure
-}
-
-src_compile() {
-	cmake-utils_src_compile
-}
-
-src_install() {
-	cmake-utils_src_install
-	pax-mark m "${ED}usr/bin/rstudio"
-	doconfd "${FILESDIR}"/rstudio-server.conf
-	dodir /etc/rstudio
-	insinto /etc/rstudio
-	doins "${FILESDIR}"/rsession.conf
-	dosym /etc/conf.d/rstudio-server.conf /etc/rstudio/rserver.conf
-	if use dedicated || use server; then
-		dopamd src/cpp/server/extras/pam/rstudio
-		newinitd "${FILESDIR}"/rstudio-server.initd rstudio-server
-	fi
-}
-
-pkg_preinst() {
-	use dedicated || gnome2_icon_savelist
-	java-pkg-2_pkg_preinst
-}
-
-pkg_postinst() {
-	use dedicated || { fdo-mime_desktop_database_update
-		fdo-mime_mime_database_update
-		gnome2_icon_cache_update ;}
-
-	if use dedicated || use server; then
-		enewgroup rstudio-server
-		enewuser rstudio-server -1 -1 -1 rstudio-server
-	fi
-}
-
-pkg_postrm() {
-	use dedicated || { fdo-mime_desktop_database_update
-		fdo-mime_mime_database_update
-		gnome2_icon_cache_update ;}
-}
diff --git a/sci-mathematics/rstudio/rstudio-0.98.490-r1.ebuild b/sci-mathematics/rstudio/rstudio-0.98.490-r1.ebuild
deleted file mode 100644
index cb0e8c0ef946..000000000000
--- a/sci-mathematics/rstudio/rstudio-0.98.490-r1.ebuild
+++ /dev/null
@@ -1,129 +0,0 @@
-# Copyright 1999-2016 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-inherit eutils cmake-utils gnome2-utils versionator fdo-mime java-pkg-2 pax-utils
-
-# TODO
-# * package gin and gwt
-# * use dict from tree, linguas
-# * do src_test (use junit from tree?)
-
-GWTVER=2.5.1
-GINVER=1.5
-
-DESCRIPTION="IDE for the R language"
-HOMEPAGE="http://www.rstudio.org"
-SRC_URI="
-	https://github.com/rstudio/rstudio/archive/v${PV}.tar.gz -> ${P}.tar.gz
-	https://s3.amazonaws.com/rstudio-buildtools/gin-${GINVER}.zip
-	https://s3.amazonaws.com/rstudio-buildtools/gwt-${GWTVER}.zip
-	https://s3.amazonaws.com/rstudio-dictionaries/core-dictionaries.zip"
-
-LICENSE="AGPL-3"
-SLOT="0"
-KEYWORDS="amd64 x86 ~amd64-linux ~x86-linux"
-IUSE=""
-
-QTVER=4.8
-QTSLOT=4
-RDEPEND="
-	>=dev-lang/R-2.11.1
-	>=dev-libs/boost-1.50:=
-	dev-libs/mathjax
-	dev-libs/openssl:0
-	sys-libs/zlib
-	>=virtual/jre-1.5:=
-	x11-libs/pango
-	>=dev-qt/qtcore-${QTVER}:${QTSLOT}
-	>=dev-qt/qtdbus-${QTVER}:${QTSLOT}
-	>=dev-qt/qtgui-${QTVER}:${QTSLOT}
-	>=dev-qt/qtwebkit-${QTVER}:${QTSLOT}
-	>=dev-qt/qtxmlpatterns-${QTVER}:${QTSLOT}"
-DEPEND="${RDEPEND}
-	app-arch/unzip
-	dev-java/ant-core
-	>=virtual/jdk-1.5
-	virtual/pkgconfig"
-#	test? ( dev-java/junit:4 )
-
-src_unpack() {
-	unpack ${P}.tar.gz gwt-${GWTVER}.zip
-	cd "${S}" || die
-	mkdir -p src/gwt/lib/{gin,gwt} dependencies/common/dictionaries || die
-	mv ../gwt-${GWTVER} src/gwt/lib/gwt/${GWTVER} || die
-	unzip -qd src/gwt/lib/gin/${GINVER} "${DISTDIR}"/gin-${GINVER}.zip || die
-	unzip -qd dependencies/common/dictionaries "${DISTDIR}"/core-dictionaries.zip || die
-}
-
-src_prepare() {
-	java-pkg-2_src_prepare
-
-	egit_clean
-
-	epatch \
-		"${FILESDIR}"/${P}-prefs.patch \
-		"${FILESDIR}"/${P}-paths.patch \
-		"${FILESDIR}"/${P}-linker_flags.patch
-
-	# Adding -DDISTRO_SHARE=... to append-flags breaks cmake so using
-	# this sed hack for now. ~RMH
-	sed -i \
-		-e "s|DISTRO_SHARE|\"share/${PN}\"|g" \
-		src/cpp/server/ServerOptions.cpp \
-		src/cpp/session/SessionOptions.cpp || die
-
-	# use mathjax from system
-	ln -sf "${EPREFIX}"/usr/share/mathjax dependencies/common/mathjax || die
-
-	# make sure icons and mime stuff are with prefix
-	sed -i \
-		-e "s:/usr:${EPREFIX}/usr:g" \
-		CMakeGlobals.txt src/cpp/desktop/CMakeLists.txt || die
-
-	# specify that namespace core the is in the global namespace and not
-	# relative to some other namespace (like its ::core not ::boost::core)
-	find . \( -name *.cpp -or -name *.hpp \) -exec sed \
-		-e 's@<core::@< ::core::@g' -e 's@\([^:]\)core::@\1::core::@g' -i {} \;
-}
-
-src_configure() {
-	export RSTUDIO_VERSION_MAJOR=$(get_version_component_range 1)
-	export RSTUDIO_VERSION_MINOR=$(get_version_component_range 2)
-	export RSTUDIO_VERSION_PATCH=$(get_version_component_range 3)
-
-	local mycmakeargs=(
-		-DDISTRO_SHARE=share/${PN}
-		-DRSTUDIO_INSTALL_FREEDESKTOP=ON
-		-DRSTUDIO_TARGET=Desktop
-		)
-
-	cmake-utils_src_configure
-}
-
-src_compile() {
-	cmake-utils_src_compile
-}
-
-src_install() {
-	cmake-utils_src_install
-	pax-mark m "${ED}usr/bin/rstudio"
-}
-
-pkg_preinst() {
-	gnome2_icon_savelist
-	java-pkg-2_pkg_preinst
-}
-
-pkg_postinst() {
-	fdo-mime_desktop_database_update
-	fdo-mime_mime_database_update
-	gnome2_icon_cache_update
-}
-
-pkg_postrm() {
-	fdo-mime_desktop_database_update
-	fdo-mime_mime_database_update
-	gnome2_icon_cache_update
-}
diff --git a/sci-mathematics/rstudio/rstudio-0.98.490.ebuild b/sci-mathematics/rstudio/rstudio-0.98.490.ebuild
deleted file mode 100644
index 59f506a074bf..000000000000
--- a/sci-mathematics/rstudio/rstudio-0.98.490.ebuild
+++ /dev/null
@@ -1,142 +0,0 @@
-# Copyright 1999-2016 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-inherit eutils user cmake-utils gnome2-utils pam versionator fdo-mime java-pkg-2 pax-utils
-
-# TODO
-# * package gin and gwt
-# * use dict from tree, linguas
-# * do src_test (use junit from tree?)
-
-GWTVER=2.5.1
-GINVER=1.5
-
-DESCRIPTION="IDE for the R language"
-HOMEPAGE="http://www.rstudio.org"
-SRC_URI="
-	https://github.com/rstudio/rstudio/archive/v${PV}.tar.gz -> ${P}.tar.gz
-	https://s3.amazonaws.com/rstudio-buildtools/gin-${GINVER}.zip
-	https://s3.amazonaws.com/rstudio-buildtools/gwt-${GWTVER}.zip
-	https://s3.amazonaws.com/rstudio-dictionaries/core-dictionaries.zip"
-
-LICENSE="AGPL-3"
-SLOT="0"
-KEYWORDS="~amd64 x86 ~amd64-linux ~x86-linux"
-IUSE="dedicated server"
-
-QTVER=4.8
-QTSLOT=4
-RDEPEND="
-	>=dev-lang/R-2.11.1
-	>=dev-libs/boost-1.50:=
-	dev-libs/mathjax
-	dev-libs/openssl:0
-	sys-libs/zlib
-	>=virtual/jre-1.5:=
-	x11-libs/pango
-	!dedicated? (
-		>=dev-qt/qtcore-${QTVER}:${QTSLOT}
-		>=dev-qt/qtdbus-${QTVER}:${QTSLOT}
-		>=dev-qt/qtgui-${QTVER}:${QTSLOT}
-		>=dev-qt/qtwebkit-${QTVER}:${QTSLOT}
-		>=dev-qt/qtxmlpatterns-${QTVER}:${QTSLOT}
-		server? ( virtual/pam )
-	)
-	dedicated? ( virtual/pam )"
-DEPEND="${RDEPEND}
-	app-arch/unzip
-	dev-java/ant-core
-	>=virtual/jdk-1.5
-	virtual/pkgconfig"
-#	test? ( dev-java/junit:4 )
-
-src_unpack() {
-	unpack ${P}.tar.gz gwt-${GWTVER}.zip
-	cd "${S}" || die
-	mkdir -p src/gwt/lib/{gin,gwt} dependencies/common/dictionaries || die
-	mv ../gwt-${GWTVER} src/gwt/lib/gwt/${GWTVER} || die
-	unzip -qd src/gwt/lib/gin/${GINVER} "${DISTDIR}"/gin-${GINVER}.zip || die
-	unzip -qd dependencies/common/dictionaries "${DISTDIR}"/core-dictionaries.zip || die
-}
-
-src_prepare() {
-	java-pkg-2_src_prepare
-
-	egit_clean
-
-	epatch \
-		"${FILESDIR}"/${P}-prefs.patch \
-		"${FILESDIR}"/${P}-paths.patch \
-		"${FILESDIR}"/${P}-linker_flags.patch
-
-	# Adding -DDISTRO_SHARE=... to append-flags breaks cmake so using
-	# this sed hack for now. ~RMH
-	sed -i \
-		-e "s|DISTRO_SHARE|\"share/${PN}\"|g" \
-		src/cpp/server/ServerOptions.cpp \
-		src/cpp/session/SessionOptions.cpp || die
-
-	# use mathjax from system
-	ln -sf "${EPREFIX}"/usr/share/mathjax dependencies/common/mathjax || die
-
-	# make sure icons and mime stuff are with prefix
-	sed -i \
-		-e "s:/usr:${EPREFIX}/usr:g" \
-		CMakeGlobals.txt src/cpp/desktop/CMakeLists.txt || die
-
-	# specify that namespace core the is in the global namespace and not
-	# relative to some other namespace (like its ::core not ::boost::core)
-	find . \( -name *.cpp -or -name *.hpp \) -exec sed \
-		-e 's@<core::@< ::core::@g' -e 's@\([^:]\)core::@\1::core::@g' -i {} \;
-}
-
-src_configure() {
-	export RSTUDIO_VERSION_MAJOR=$(get_version_component_range 1)
-	export RSTUDIO_VERSION_MINOR=$(get_version_component_range 2)
-	export RSTUDIO_VERSION_PATCH=$(get_version_component_range 3)
-
-	local mycmakeargs=(
-		-DDISTRO_SHARE=share/${PN}
-		$(cmake-utils_use !dedicated RSTUDIO_INSTALL_FREEDESKTOP)
-		-DRSTUDIO_TARGET=$(usex dedicated "Server" "$(usex server "Development" "Desktop")")
-		)
-
-	cmake-utils_src_configure
-}
-
-src_compile() {
-	cmake-utils_src_compile
-}
-
-src_install() {
-	cmake-utils_src_install
-	pax-mark m "${ED}usr/bin/rstudio"
-	if use dedicated || use server; then
-		dopamd src/cpp/server/extras/pam/rstudio
-		newinitd "${FILESDIR}"/rstudio-server.initd rstudio-server
-	fi
-}
-
-pkg_preinst() {
-	use dedicated || gnome2_icon_savelist
-	java-pkg-2_pkg_preinst
-}
-
-pkg_postinst() {
-	use dedicated || { fdo-mime_desktop_database_update
-		fdo-mime_mime_database_update
-		gnome2_icon_cache_update ;}
-
-	if use dedicated || use server; then
-		enewgroup rstudio-server
-		enewuser rstudio-server -1 -1 -1 rstudio-server
-	fi
-}
-
-pkg_postrm() {
-	use dedicated || { fdo-mime_desktop_database_update
-		fdo-mime_mime_database_update
-		gnome2_icon_cache_update ;}
-}
diff --git a/sci-mathematics/rstudio/rstudio-0.98.932.ebuild b/sci-mathematics/rstudio/rstudio-0.98.932.ebuild
deleted file mode 100644
index f52c74fdfd93..000000000000
--- a/sci-mathematics/rstudio/rstudio-0.98.932.ebuild
+++ /dev/null
@@ -1,173 +0,0 @@
-# Copyright 1999-2016 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-inherit eutils user cmake-utils gnome2-utils pam versionator fdo-mime java-pkg-2 pax-utils
-
-# TODO
-# * package gin and gwt
-# * use dict from tree, linguas
-# * do src_test (use junit from tree?)
-
-GWTVER=2.6.0
-GINVER=1.5
-SELENIUMVER=2.37.0
-CHROMEDRIVER_VER=2.7
-PANDOC_VER=1.12.3
-PACKRAT_VER=0.3.0
-RMARKDOWN_VER=0.2.49
-
-DESCRIPTION="IDE for the R language"
-HOMEPAGE="http://www.rstudio.org"
-SRC_URI="
-	https://github.com/rstudio/rstudio/archive/v${PV}.tar.gz -> ${P}.tar.gz
-	https://s3.amazonaws.com/rstudio-buildtools/gin-${GINVER}.zip
-	https://s3.amazonaws.com/rstudio-buildtools/gwt-${GWTVER}.zip
-	https://s3.amazonaws.com/rstudio-buildtools/selenium-java-${SELENIUMVER}.zip
-	https://s3.amazonaws.com/rstudio-buildtools/selenium-server-standalone-${SELENIUMVER}.jar
-	https://s3.amazonaws.com/rstudio-buildtools/chromedriver-linux
-	https://s3.amazonaws.com/rstudio-dictionaries/core-dictionaries.zip
-	https://dev.gentoo.org/~hasufell/distfiles/packrat_${PACKRAT_VER}.tar.gz
-	https://dev.gentoo.org/~hasufell/distfiles/rmarkdown_${RMARKDOWN_VER}.tar.gz"
-
-LICENSE="AGPL-3"
-SLOT="0"
-KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
-IUSE="dedicated server"
-
-QTVER=4.8
-QTSLOT=4
-RDEPEND="
-	app-text/pandoc
-	dev-haskell/pandoc-citeproc
-	>=dev-lang/R-2.11.1
-	>=dev-libs/boost-1.50:=
-	dev-libs/mathjax
-	dev-libs/openssl:0
-	sys-libs/zlib
-	>=virtual/jre-1.5:=
-	x11-libs/pango
-	!dedicated? (
-		>=dev-qt/qtcore-${QTVER}:${QTSLOT}
-		>=dev-qt/qtdbus-${QTVER}:${QTSLOT}
-		>=dev-qt/qtgui-${QTVER}:${QTSLOT}
-		>=dev-qt/qtwebkit-${QTVER}:${QTSLOT}
-		>=dev-qt/qtxmlpatterns-${QTVER}:${QTSLOT}
-		server? ( virtual/pam )
-	)
-	dedicated? ( virtual/pam )"
-DEPEND="${RDEPEND}
-	app-arch/unzip
-	dev-java/ant-core
-	>=virtual/jdk-1.5
-	virtual/pkgconfig"
-#	test? ( dev-java/junit:4 )
-
-src_unpack() {
-	unpack ${P}.tar.gz gwt-${GWTVER}.zip
-	cd "${S}" || die
-	mkdir -p src/gwt/lib/{gin,gwt} \
-		dependencies/common/dictionaries \
-		src/gwt/lib/selenium/${SELENIUMVER} \
-		src/gwt/lib/selenium/chromedriver/${CHROMEDRIVER_VER} || die
-	mv ../gwt-${GWTVER} src/gwt/lib/gwt/${GWTVER} || die
-	unzip -qd src/gwt/lib/gin/${GINVER} \
-		"${DISTDIR}"/gin-${GINVER}.zip || die
-	unzip -qd dependencies/common/dictionaries \
-		"${DISTDIR}"/core-dictionaries.zip || die
-	unzip -qd src/gwt/lib/selenium/${SELENIUMVER} \
-		"${DISTDIR}"/selenium-java-${SELENIUMVER}.zip || die
-	cp "${DISTDIR}"/selenium-server-standalone-${SELENIUMVER}.jar \
-		src/gwt/lib/selenium/${SELENIUMVER}/ || die
-	cp "${DISTDIR}"/chromedriver-linux \
-		src/gwt/lib/selenium/chromedriver/${CHROMEDRIVER_VER}/ || die
-	cd dependencies/common || die
-	unpack packrat_${PACKRAT_VER}.tar.gz
-	unpack rmarkdown_${RMARKDOWN_VER}.tar.gz
-	cp "${DISTDIR}"/rmarkdown_${RMARKDOWN_VER}.tar.gz \
-		. || die
-	cp "${DISTDIR}"/packrat_${PACKRAT_VER}.tar.gz \
-		. || die
-}
-
-src_prepare() {
-	java-pkg-2_src_prepare
-
-	egit_clean
-
-	epatch \
-		"${FILESDIR}"/${PN}-0.98.490-prefs.patch \
-		"${FILESDIR}"/${P}-paths.patch \
-		"${FILESDIR}"/${P}-pandoc.patch \
-		"${FILESDIR}"/${PN}-0.98.490-linker_flags.patch
-
-	# Adding -DDISTRO_SHARE=... to append-flags breaks cmake so using
-	# this sed hack for now. ~RMH
-	sed -i \
-		-e "s|DISTRO_SHARE|\"share/${PN}\"|g" \
-		src/cpp/server/ServerOptions.cpp \
-		src/cpp/session/SessionOptions.cpp || die
-
-	# use mathjax from system
-	ln -sf "${EPREFIX}"/usr/share/mathjax dependencies/common/mathjax || die
-
-	# make sure icons and mime stuff are with prefix
-	sed -i \
-		-e "s:/usr:${EPREFIX}/usr:g" \
-		CMakeGlobals.txt src/cpp/desktop/CMakeLists.txt || die
-
-	# specify that namespace core the is in the global namespace and not
-	# relative to some other namespace (like its ::core not ::boost::core)
-	find . \( -name *.cpp -or -name *.hpp \) -exec sed \
-		-e 's@<core::@< ::core::@g' -e 's@\([^:]\)core::@\1::core::@g' -i {} \;
-}
-
-src_configure() {
-	export RSTUDIO_VERSION_MAJOR=$(get_version_component_range 1)
-	export RSTUDIO_VERSION_MINOR=$(get_version_component_range 2)
-	export RSTUDIO_VERSION_PATCH=$(get_version_component_range 3)
-
-	local mycmakeargs=(
-		-DDISTRO_SHARE=share/${PN}
-		$(cmake-utils_use !dedicated RSTUDIO_INSTALL_FREEDESKTOP)
-		-DRSTUDIO_TARGET=$(usex dedicated "Server" "$(usex server "Development" "Desktop")")
-		)
-
-	cmake-utils_src_configure
-}
-
-src_compile() {
-	cmake-utils_src_compile
-}
-
-src_install() {
-	cmake-utils_src_install
-	pax-mark m "${ED}usr/bin/rstudio"
-	if use dedicated || use server; then
-		dopamd src/cpp/server/extras/pam/rstudio
-		newinitd "${FILESDIR}"/rstudio-server.initd rstudio-server
-	fi
-}
-
-pkg_preinst() {
-	use dedicated || gnome2_icon_savelist
-	java-pkg-2_pkg_preinst
-}
-
-pkg_postinst() {
-	use dedicated || { fdo-mime_desktop_database_update
-		fdo-mime_mime_database_update
-		gnome2_icon_cache_update ;}
-
-	if use dedicated || use server; then
-		enewgroup rstudio-server
-		enewuser rstudio-server -1 -1 -1 rstudio-server
-	fi
-}
-
-pkg_postrm() {
-	use dedicated || { fdo-mime_desktop_database_update
-		fdo-mime_mime_database_update
-		gnome2_icon_cache_update ;}
-}
diff --git a/sci-mathematics/rstudio/rstudio-0.98.953.ebuild b/sci-mathematics/rstudio/rstudio-0.98.953.ebuild
deleted file mode 100644
index 9b56c4790ed7..000000000000
--- a/sci-mathematics/rstudio/rstudio-0.98.953.ebuild
+++ /dev/null
@@ -1,174 +0,0 @@
-# Copyright 1999-2016 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-inherit eutils user cmake-utils gnome2-utils pam versionator fdo-mime java-pkg-2 pax-utils
-
-# TODO
-# * package gin and gwt
-# * use dict from tree, linguas
-# * do src_test (use junit from tree?)
-
-GWTVER=2.6.0
-GINVER=1.5
-SELENIUMVER=2.37.0
-CHROMEDRIVER_VER=2.7
-PANDOC_VER=1.12.3
-PACKRAT_VER=0.3.0
-RMARKDOWN_VER=0.2.49
-
-DESCRIPTION="IDE for the R language"
-HOMEPAGE="http://www.rstudio.org"
-SRC_URI="
-	https://github.com/rstudio/rstudio/archive/v${PV}.tar.gz -> ${P}.tar.gz
-	https://s3.amazonaws.com/rstudio-buildtools/gin-${GINVER}.zip
-	https://s3.amazonaws.com/rstudio-buildtools/gwt-${GWTVER}.zip
-	https://s3.amazonaws.com/rstudio-buildtools/selenium-java-${SELENIUMVER}.zip
-	https://s3.amazonaws.com/rstudio-buildtools/selenium-server-standalone-${SELENIUMVER}.jar
-	https://s3.amazonaws.com/rstudio-buildtools/chromedriver-linux
-	https://s3.amazonaws.com/rstudio-dictionaries/core-dictionaries.zip
-	https://dev.gentoo.org/~hasufell/distfiles/packrat_${PACKRAT_VER}.tar.gz
-	https://dev.gentoo.org/~hasufell/distfiles/rmarkdown_${RMARKDOWN_VER}.tar.gz"
-
-LICENSE="AGPL-3"
-SLOT="0"
-KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
-IUSE="dedicated server"
-
-QTVER=4.8
-QTSLOT=4
-RDEPEND="
-	app-text/pandoc
-	dev-haskell/pandoc-citeproc
-	>=dev-lang/R-2.11.1
-	>=dev-libs/boost-1.50:=
-	dev-libs/mathjax
-	dev-libs/openssl:0
-	sys-apps/util-linux
-	sys-libs/zlib
-	>=virtual/jre-1.5:=
-	x11-libs/pango
-	!dedicated? (
-		>=dev-qt/qtcore-${QTVER}:${QTSLOT}
-		>=dev-qt/qtdbus-${QTVER}:${QTSLOT}
-		>=dev-qt/qtgui-${QTVER}:${QTSLOT}
-		>=dev-qt/qtwebkit-${QTVER}:${QTSLOT}
-		>=dev-qt/qtxmlpatterns-${QTVER}:${QTSLOT}
-		server? ( virtual/pam )
-	)
-	dedicated? ( virtual/pam )"
-DEPEND="${RDEPEND}
-	app-arch/unzip
-	dev-java/ant-core
-	>=virtual/jdk-1.5
-	virtual/pkgconfig"
-#	test? ( dev-java/junit:4 )
-
-src_unpack() {
-	unpack ${P}.tar.gz gwt-${GWTVER}.zip
-	cd "${S}" || die
-	mkdir -p src/gwt/lib/{gin,gwt} \
-		dependencies/common/dictionaries \
-		src/gwt/lib/selenium/${SELENIUMVER} \
-		src/gwt/lib/selenium/chromedriver/${CHROMEDRIVER_VER} || die
-	mv ../gwt-${GWTVER} src/gwt/lib/gwt/${GWTVER} || die
-	unzip -qd src/gwt/lib/gin/${GINVER} \
-		"${DISTDIR}"/gin-${GINVER}.zip || die
-	unzip -qd dependencies/common/dictionaries \
-		"${DISTDIR}"/core-dictionaries.zip || die
-	unzip -qd src/gwt/lib/selenium/${SELENIUMVER} \
-		"${DISTDIR}"/selenium-java-${SELENIUMVER}.zip || die
-	cp "${DISTDIR}"/selenium-server-standalone-${SELENIUMVER}.jar \
-		src/gwt/lib/selenium/${SELENIUMVER}/ || die
-	cp "${DISTDIR}"/chromedriver-linux \
-		src/gwt/lib/selenium/chromedriver/${CHROMEDRIVER_VER}/ || die
-	cd dependencies/common || die
-	unpack packrat_${PACKRAT_VER}.tar.gz
-	unpack rmarkdown_${RMARKDOWN_VER}.tar.gz
-	cp "${DISTDIR}"/rmarkdown_${RMARKDOWN_VER}.tar.gz \
-		. || die
-	cp "${DISTDIR}"/packrat_${PACKRAT_VER}.tar.gz \
-		. || die
-}
-
-src_prepare() {
-	java-pkg-2_src_prepare
-
-	egit_clean
-
-	epatch \
-		"${FILESDIR}"/${PN}-0.98.490-prefs.patch \
-		"${FILESDIR}"/${PN}-0.98.932-paths.patch \
-		"${FILESDIR}"/${PN}-0.98.932-pandoc.patch \
-		"${FILESDIR}"/${PN}-0.98.490-linker_flags.patch
-
-	# Adding -DDISTRO_SHARE=... to append-flags breaks cmake so using
-	# this sed hack for now. ~RMH
-	sed -i \
-		-e "s|DISTRO_SHARE|\"share/${PN}\"|g" \
-		src/cpp/server/ServerOptions.cpp \
-		src/cpp/session/SessionOptions.cpp || die
-
-	# use mathjax from system
-	ln -sf "${EPREFIX}"/usr/share/mathjax dependencies/common/mathjax || die
-
-	# make sure icons and mime stuff are with prefix
-	sed -i \
-		-e "s:/usr:${EPREFIX}/usr:g" \
-		CMakeGlobals.txt src/cpp/desktop/CMakeLists.txt || die
-
-	# specify that namespace core the is in the global namespace and not
-	# relative to some other namespace (like its ::core not ::boost::core)
-	find . \( -name *.cpp -or -name *.hpp \) -exec sed \
-		-e 's@<core::@< ::core::@g' -e 's@\([^:]\)core::@\1::core::@g' -i {} \;
-}
-
-src_configure() {
-	export RSTUDIO_VERSION_MAJOR=$(get_version_component_range 1)
-	export RSTUDIO_VERSION_MINOR=$(get_version_component_range 2)
-	export RSTUDIO_VERSION_PATCH=$(get_version_component_range 3)
-
-	local mycmakeargs=(
-		-DDISTRO_SHARE=share/${PN}
-		$(cmake-utils_use !dedicated RSTUDIO_INSTALL_FREEDESKTOP)
-		-DRSTUDIO_TARGET=$(usex dedicated "Server" "$(usex server "Development" "Desktop")")
-		)
-
-	cmake-utils_src_configure
-}
-
-src_compile() {
-	cmake-utils_src_compile
-}
-
-src_install() {
-	cmake-utils_src_install
-	pax-mark m "${ED}usr/bin/rstudio"
-	if use dedicated || use server; then
-		dopamd src/cpp/server/extras/pam/rstudio
-		newinitd "${FILESDIR}"/rstudio-server.initd rstudio-server
-	fi
-}
-
-pkg_preinst() {
-	use dedicated || gnome2_icon_savelist
-	java-pkg-2_pkg_preinst
-}
-
-pkg_postinst() {
-	use dedicated || { fdo-mime_desktop_database_update
-		fdo-mime_mime_database_update
-		gnome2_icon_cache_update ;}
-
-	if use dedicated || use server; then
-		enewgroup rstudio-server
-		enewuser rstudio-server -1 -1 -1 rstudio-server
-	fi
-}
-
-pkg_postrm() {
-	use dedicated || { fdo-mime_desktop_database_update
-		fdo-mime_mime_database_update
-		gnome2_icon_cache_update ;}
-}
-- 
cgit v1.2.3