gentoo resync : 22.12.2021

2 files changed, 166 insertions, 0 deletions

diff --git a/dev-python/numpy/Manifest b/dev-python/numpy/Manifest
index ebd600111452..ddc1fba0eb7b 100644
--- a/dev-python/numpy/Manifest
+++ b/dev-python/numpy/Manifest
@@ -6,21 +6,26 @@ DIST numpy-1.21.1.zip 10259878 BLAKE2B ba5d8eb2d294e199c86d8e96026d148098f571639
 DIST numpy-1.21.2.zip 10264801 BLAKE2B 2d88506faa5bc767a16c000f201559917d800fd205c75f30c1e61d4b34e214b376da9876e96186914f9fe23bf033a305bf9212f593841407e3bf4e516b5982a6 SHA512 ad08110d9a73a73ef1a546de5fcd6dfe600c17b396f629c3a19ade7b3f226688cf7524fed78c035fd4ddda135e2bcf9facb5e061fb59640b424da2ed070c4184
 DIST numpy-1.21.3.zip 10269351 BLAKE2B 60fc96d91e2c4e0b1c6ee409e02640686fe257f5addbb17229568f591551ea3c415c4aac97b7cdb161b88ce436e42a766b161bd5a82f8cb66fff6771c0097bd3 SHA512 8fbe4e8543b72ad5203d5b122eb3d875e48965682945898e54f4ce82cf790713dfd9185b8b12439aefa86bf25209ea25d04ec3ca2aa2b8d2f32d69358421b792
 DIST numpy-1.21.4.zip 10646392 BLAKE2B 6e2953c6ca8e35c99f5de5faaacfb2b76b351a5c9521ba27449fcdeca5614978ff7d71fc52ce3787d1c7506c4e8eb81b1a92d3bf6825de1cb1d304ea4de83820 SHA512 85575a009bf40a8e5acaaa949d2669545968825df34273e367c42af36fa882ebb0830ff7953b5617d34d3061b3877238524937c42470fac9464479dc33ae60ce
+DIST numpy-1.21.5.zip 10652289 BLAKE2B c5bded91e5d06670ea3ace51560411c61985dd89ff0455b833838320f1714cf788a21a60aefd7a0ff30ad0abb93c9d296f60e637944000efa090b6c259c1f47c SHA512 03affa9d0bbf42a8d35f5454f1527df28539e306dc2b313fa775625201a5fe9eb7376f443bba5d50e08567546708811beb7201819eeb2af5a0653b7d91249f78
 DIST numpy-html-1.21.1.zip 24270531 BLAKE2B 8a7a531afa559aebeb7a7b7ef94b2248df60a60fdfc190ca002dda625003df8b432fed393d6dd0c0c00fafbeb5064a61e3d99bba1a6c41e1e6e34ce091a43c89 SHA512 a165b95729a13806a03464cf39c20a0e18cfcf7701f05cd7777cd115bfaf0972f7155d201c7bd8d4177c5761f8800c982b3e3c29729a5e9ed356059842a44dcc
 DIST numpy-html-1.21.2.zip 24270531 BLAKE2B 8a7a531afa559aebeb7a7b7ef94b2248df60a60fdfc190ca002dda625003df8b432fed393d6dd0c0c00fafbeb5064a61e3d99bba1a6c41e1e6e34ce091a43c89 SHA512 a165b95729a13806a03464cf39c20a0e18cfcf7701f05cd7777cd115bfaf0972f7155d201c7bd8d4177c5761f8800c982b3e3c29729a5e9ed356059842a44dcc
 DIST numpy-html-1.21.3.zip 24270531 BLAKE2B 8a7a531afa559aebeb7a7b7ef94b2248df60a60fdfc190ca002dda625003df8b432fed393d6dd0c0c00fafbeb5064a61e3d99bba1a6c41e1e6e34ce091a43c89 SHA512 a165b95729a13806a03464cf39c20a0e18cfcf7701f05cd7777cd115bfaf0972f7155d201c7bd8d4177c5761f8800c982b3e3c29729a5e9ed356059842a44dcc
 DIST numpy-html-1.21.4.zip 24270531 BLAKE2B 8a7a531afa559aebeb7a7b7ef94b2248df60a60fdfc190ca002dda625003df8b432fed393d6dd0c0c00fafbeb5064a61e3d99bba1a6c41e1e6e34ce091a43c89 SHA512 a165b95729a13806a03464cf39c20a0e18cfcf7701f05cd7777cd115bfaf0972f7155d201c7bd8d4177c5761f8800c982b3e3c29729a5e9ed356059842a44dcc
+DIST numpy-html-1.21.5.zip 24270531 BLAKE2B 8a7a531afa559aebeb7a7b7ef94b2248df60a60fdfc190ca002dda625003df8b432fed393d6dd0c0c00fafbeb5064a61e3d99bba1a6c41e1e6e34ce091a43c89 SHA512 a165b95729a13806a03464cf39c20a0e18cfcf7701f05cd7777cd115bfaf0972f7155d201c7bd8d4177c5761f8800c982b3e3c29729a5e9ed356059842a44dcc
 DIST numpy-ref-1.21.1.pdf 7326979 BLAKE2B 3c1130a576c46e0705ca1f12e7a3345beb1acdd23de2a81448e4e9755636dec313e277a0d3167dc3b211332b3fc415ac0d96e7c99e859b51a16a589426814182 SHA512 5dd37ca03f1f098fffce80aa6a1a6eb8ec66df4322da1c620bd1f507e89ee2ceb222de32c9b7974f085ddf146f0a789ea8eb27d792a13c1aa8a893c00f94f75f
 DIST numpy-ref-1.21.2.pdf 7326979 BLAKE2B 3c1130a576c46e0705ca1f12e7a3345beb1acdd23de2a81448e4e9755636dec313e277a0d3167dc3b211332b3fc415ac0d96e7c99e859b51a16a589426814182 SHA512 5dd37ca03f1f098fffce80aa6a1a6eb8ec66df4322da1c620bd1f507e89ee2ceb222de32c9b7974f085ddf146f0a789ea8eb27d792a13c1aa8a893c00f94f75f
 DIST numpy-ref-1.21.3.pdf 7326979 BLAKE2B 3c1130a576c46e0705ca1f12e7a3345beb1acdd23de2a81448e4e9755636dec313e277a0d3167dc3b211332b3fc415ac0d96e7c99e859b51a16a589426814182 SHA512 5dd37ca03f1f098fffce80aa6a1a6eb8ec66df4322da1c620bd1f507e89ee2ceb222de32c9b7974f085ddf146f0a789ea8eb27d792a13c1aa8a893c00f94f75f
 DIST numpy-ref-1.21.4.pdf 7326979 BLAKE2B 3c1130a576c46e0705ca1f12e7a3345beb1acdd23de2a81448e4e9755636dec313e277a0d3167dc3b211332b3fc415ac0d96e7c99e859b51a16a589426814182 SHA512 5dd37ca03f1f098fffce80aa6a1a6eb8ec66df4322da1c620bd1f507e89ee2ceb222de32c9b7974f085ddf146f0a789ea8eb27d792a13c1aa8a893c00f94f75f
+DIST numpy-ref-1.21.5.pdf 7326979 BLAKE2B 3c1130a576c46e0705ca1f12e7a3345beb1acdd23de2a81448e4e9755636dec313e277a0d3167dc3b211332b3fc415ac0d96e7c99e859b51a16a589426814182 SHA512 5dd37ca03f1f098fffce80aa6a1a6eb8ec66df4322da1c620bd1f507e89ee2ceb222de32c9b7974f085ddf146f0a789ea8eb27d792a13c1aa8a893c00f94f75f
 DIST numpy-user-1.21.1.pdf 5142404 BLAKE2B d670f1eb0f060599a640c52bdeba53b1758007fc2090a5b8fb6e135e71114149a0085811e4bc21396eabb1123ffb9edd39f8192d0165ab42dd066a9747eb3a3f SHA512 dde264abff1787efd50e913b6facf83522b3344ed88fd15d6fe73ecd44c6a3db1e4ce4251c9674bbcb122f72ab86c64142b2f4f992a6449405041f8e1f5f1ace
 DIST numpy-user-1.21.2.pdf 5142404 BLAKE2B d670f1eb0f060599a640c52bdeba53b1758007fc2090a5b8fb6e135e71114149a0085811e4bc21396eabb1123ffb9edd39f8192d0165ab42dd066a9747eb3a3f SHA512 dde264abff1787efd50e913b6facf83522b3344ed88fd15d6fe73ecd44c6a3db1e4ce4251c9674bbcb122f72ab86c64142b2f4f992a6449405041f8e1f5f1ace
 DIST numpy-user-1.21.3.pdf 5142404 BLAKE2B d670f1eb0f060599a640c52bdeba53b1758007fc2090a5b8fb6e135e71114149a0085811e4bc21396eabb1123ffb9edd39f8192d0165ab42dd066a9747eb3a3f SHA512 dde264abff1787efd50e913b6facf83522b3344ed88fd15d6fe73ecd44c6a3db1e4ce4251c9674bbcb122f72ab86c64142b2f4f992a6449405041f8e1f5f1ace
 DIST numpy-user-1.21.4.pdf 5142404 BLAKE2B d670f1eb0f060599a640c52bdeba53b1758007fc2090a5b8fb6e135e71114149a0085811e4bc21396eabb1123ffb9edd39f8192d0165ab42dd066a9747eb3a3f SHA512 dde264abff1787efd50e913b6facf83522b3344ed88fd15d6fe73ecd44c6a3db1e4ce4251c9674bbcb122f72ab86c64142b2f4f992a6449405041f8e1f5f1ace
+DIST numpy-user-1.21.5.pdf 5142404 BLAKE2B d670f1eb0f060599a640c52bdeba53b1758007fc2090a5b8fb6e135e71114149a0085811e4bc21396eabb1123ffb9edd39f8192d0165ab42dd066a9747eb3a3f SHA512 dde264abff1787efd50e913b6facf83522b3344ed88fd15d6fe73ecd44c6a3db1e4ce4251c9674bbcb122f72ab86c64142b2f4f992a6449405041f8e1f5f1ace
 EBUILD numpy-1.21.1-r1.ebuild 3726 BLAKE2B c81ef764b3a069469783d3c005894bab1b552e1d638f3bf21692e8b3116d54e71bc5d0260112467427a0fd5a4172db950dae4679706fc503115c14ee13f2c387 SHA512 4ea551537644b20d252e5056bf8704ce872af0bdbd058be17b27f65225c1f8264ede22a8e06c754786322970ccdb7246cfae41e3ddb76287bba77882738f800e
 EBUILD numpy-1.21.2-r1.ebuild 3716 BLAKE2B 5e3358ef575cc4eb830f6ff0463250278581c7aeb370d10e283bdb4abc410190149709c9e28257f8683e54cb8f1cf221164607c1681b397af90f125565820c47 SHA512 0cba076a427f2d93387f176287de7c7cec07bcfc698532366221810e6aa4040a84006b420718276441c9d96b7a73d7bf474a91c746eb437b49fdca9ec49ffcc6
 EBUILD numpy-1.21.3-r1.ebuild 3944 BLAKE2B 8c946e32d5743994a702b6887929b4709c462af2524d0f179390866496fb449d6728574f184c768c37b1431b175bf64a1f847746ac691b36868cfe2688599f7e SHA512 a323dd2db55634826d6ded1448e7f43eb56ca7ab453746fef8ad9f85200e3de690109389485026c608b1e8931fbe58b929e5f29f4681fc47dba98b07e758223e
 EBUILD numpy-1.21.4-r2.ebuild 4300 BLAKE2B 57d1e35b092af83be85ea6983b9bd9e167f7abf727f7067d2472a8bf60183f6976db3610e74c0deec77af9bdad2a79648346db6f6df5676cf6b0d194047e589f SHA512 e3857a12a4878b1e0327878d91a6d6b891b00b97a61c6d11588b7508bb135b800543fc7afc107de3eecd92cc283983ee90d0de5d6b5445a34388c8f0aa84ba75
 EBUILD numpy-1.21.4.ebuild 3902 BLAKE2B 52a370dc3c788eb51782b27c451ea5b96777f4cb1bb54d239bcdd807d5d944790429b904ccef1c7b131ad59ba61584c01903dffce06b899b0eb07e01e98e7af9 SHA512 ff3c0a57f5d3b7b2f74c4cb76fc6e39f045531ab754ac83c07894e3b71944f4e2c938a288227139073f5b495b14ba9c85c3ef8de321755509856a29bcd710fb6
+EBUILD numpy-1.21.5.ebuild 4258 BLAKE2B d5a8b9f09593169b1e114e8c0e0cf49ef2291c8429a81b40921c3cd1c2cf81681677b01ee4b39a5f51d078341992a2289e65735fe4eb0de7dfb43156499bccfc SHA512 8d189ab55bf3b79d73fce583998ac27ba57b7b9e53d59f02f56cdd3ac21c5452908d728c92e270c835f01d434c2aa6d0df30571f72ae7bf7589781b65b06985b
 MISC metadata.xml 930 BLAKE2B 8731116ae6d997dc77539b6ff9a8aff2466986888e3fc2c2a77499522360ba5ba11ec61e4eb6756b7cdbb9d7dafe05a862708dcc0735260e8af038a42dea3419 SHA512 1db89ba1a99457bef29a9501e2d14c11904251163172604fe58001048beb477eba5b1e4784c8636d0eb6767614b80a7341823a9d264a5663cc055a5a2c437390
diff --git a/dev-python/numpy/numpy-1.21.5.ebuild b/dev-python/numpy/numpy-1.21.5.ebuild
new file mode 100644
index 000000000000..f982ad5a8e95
--- /dev/null
+++ b/dev-python/numpy/numpy-1.21.5.ebuild
@@ -0,0 +1,161 @@
+# Copyright 1999-2021 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=7
+
+PYTHON_COMPAT=( python3_{8..10} )
+PYTHON_REQ_USE="threads(+)"
+
+FORTRAN_NEEDED=lapack
+
+inherit distutils-r1 flag-o-matic fortran-2 toolchain-funcs
+
+DOC_PV=${PV}
+DESCRIPTION="Fast array and numerical python library"
+HOMEPAGE="https://numpy.org/"
+SRC_URI="
+	mirror://pypi/${PN:0:1}/${PN}/${P}.zip
+	doc? (
+		https://numpy.org/doc/$(ver_cut 1-2 ${DOC_PV})/numpy-html.zip -> numpy-html-${DOC_PV}.zip
+		https://numpy.org/doc/$(ver_cut 1-2 ${DOC_PV})/numpy-ref.pdf -> numpy-ref-${DOC_PV}.pdf
+		https://numpy.org/doc/$(ver_cut 1-2 ${DOC_PV})/numpy-user.pdf -> numpy-user-${DOC_PV}.pdf
+	)"
+LICENSE="BSD"
+SLOT="0"
+KEYWORDS="~alpha ~amd64 ~arm ~arm64 ~hppa ~ia64 ~m68k ~mips ~ppc ~ppc64 ~riscv ~s390 ~sparc ~x86 ~amd64-linux ~x86-linux ~ppc-macos ~x64-macos ~sparc-solaris ~x64-solaris ~x86-solaris"
+IUSE="doc lapack"
+
+RDEPEND="
+	lapack? (
+		>=virtual/cblas-3.8
+		>=virtual/lapack-3.8
+	)
+"
+BDEPEND="
+	${RDEPEND}
+	app-arch/unzip
+	>=dev-python/cython-0.29.24[${PYTHON_USEDEP}]
+	lapack? ( virtual/pkgconfig )
+	test? (
+		>=dev-python/hypothesis-5.8.0[${PYTHON_USEDEP}]
+		>=dev-python/pytz-2019.3[${PYTHON_USEDEP}]
+		>=dev-python/cffi-1.14.0[${PYTHON_USEDEP}]
+	)
+"
+
+PATCHES=(
+	"${FILESDIR}"/numpy-1.21.0-no-hardcode-blasv2.patch
+	"${FILESDIR}"/numpy-1.21.4-build-compiler-args-ceph.patch
+)
+
+distutils_enable_tests pytest
+
+src_unpack() {
+	default
+	if use doc; then
+		unzip -qo "${DISTDIR}"/numpy-html-${DOC_PV}.zip -d html || die
+	fi
+}
+
+python_prepare_all() {
+	if use lapack; then
+		local incdir="${EPREFIX}"/usr/include
+		local libdir="${EPREFIX}"/usr/$(get_libdir)
+		cat >> site.cfg <<-EOF || die
+			[blas]
+			include_dirs = ${incdir}
+			library_dirs = ${libdir}
+			blas_libs = cblas,blas
+			[lapack]
+			library_dirs = ${libdir}
+			lapack_libs = lapack
+		EOF
+	else
+		export {ATLAS,PTATLAS,BLAS,LAPACK,MKL}=None
+	fi
+
+	export CC="$(tc-getCC) ${CFLAGS}"
+
+	append-flags -fno-strict-aliasing
+
+	# See progress in http://projects.scipy.org/scipy/numpy/ticket/573
+	# with the subtle difference that we don't want to break Darwin where
+	# -shared is not a valid linker argument
+	if [[ ${CHOST} != *-darwin* ]]; then
+		append-ldflags -shared
+	fi
+
+	# only one fortran to link with:
+	# linking with cblas and lapack library will force
+	# autodetecting and linking to all available fortran compilers
+	append-fflags -fPIC
+	if use lapack; then
+		NUMPY_FCONFIG="config_fc --noopt --noarch"
+		# workaround bug 335908
+		[[ $(tc-getFC) == *gfortran* ]] && NUMPY_FCONFIG+=" --fcompiler=gnu95"
+	fi
+
+	# don't version f2py, we will handle it.
+	sed -i -e '/f2py_exe/s: + os\.path.*$::' numpy/f2py/setup.py || die
+
+	# disable fuzzed tests
+	find numpy/*/tests -name '*.py' -exec sed -i \
+		-e 's:def \(.*_fuzz\):def _\1:' {} + || die
+	# very memory- and disk-hungry
+	sed -i -e 's:test_large_zip:_&:' numpy/lib/tests/test_io.py || die
+
+	distutils-r1_python_prepare_all
+}
+
+python_compile() {
+	export MAKEOPTS=-j1 #660754
+
+	distutils-r1_python_compile ${NUMPY_FCONFIG}
+}
+
+python_test() {
+	local deselect=(
+		numpy/typing/tests/test_typing.py::test_reveal[arrayterator.py]
+	)
+
+	if use arm && [[ $(uname -m || echo "unknown") == "armv8l" ]] ; then
+		# Degenerate case. arm32 chroot on arm64.
+		# bug #774108
+		deselect+=(
+			numpy/core/tests/test_cpu_features.py::Test_ARM_Features::test_features
+		)
+	fi
+
+	if use x86 ; then
+		deselect+=(
+			# https://github.com/numpy/numpy/issues/18388
+			numpy/core/tests/test_umath.py::TestRemainder::test_float_remainder_overflow
+			# https://github.com/numpy/numpy/issues/18387
+			numpy/random/tests/test_generator_mt19937.py::TestRandomDist::test_pareto
+		)
+	fi
+
+	distutils_install_for_testing --single-version-externally-managed \
+		--record "${TMPDIR}/record.txt" ${NUMPY_FCONFIG}
+
+	cd "${TEST_DIR}/lib" || die
+	epytest ${deselect[@]/#/--deselect }
+}
+
+python_install() {
+	# https://github.com/numpy/numpy/issues/16005
+	local mydistutilsargs=( build_src )
+	distutils-r1_python_install ${NUMPY_FCONFIG}
+	python_optimize
+}
+
+python_install_all() {
+	local DOCS=( LICENSE.txt README.md THANKS.txt )
+
+	if use doc; then
+		local HTML_DOCS=( "${WORKDIR}"/html/. )
+		DOCS+=( "${DISTDIR}"/${PN}-{user,ref}-${DOC_PV}.pdf )
+	fi
+
+	distutils-r1_python_install_all
+}