diff options
author | V3n3RiX <venerix@redcorelinux.org> | 2018-07-14 21:03:06 +0100 |
---|---|---|
committer | V3n3RiX <venerix@redcorelinux.org> | 2018-07-14 21:03:06 +0100 |
commit | 8376ef56580626e9c0f796d5b85b53a0a1c7d5f5 (patch) | |
tree | 7681bbd4e8b05407772df40a4bf04cbbc8afc3fa /dev-python/pyfits | |
parent | 30a9caf154332f12ca60756e1b75d2f0e3e1822d (diff) |
gentoo resync : 14.07.2018
Diffstat (limited to 'dev-python/pyfits')
-rw-r--r-- | dev-python/pyfits/Manifest | 9 | ||||
-rw-r--r-- | dev-python/pyfits/files/01-system-cfitsio.patch | 176 | ||||
-rw-r--r-- | dev-python/pyfits/files/02-numpy-deprecation-warning.patch | 24 | ||||
-rw-r--r-- | dev-python/pyfits/files/03-fix-for-cfitsio-3380.patch | 43 | ||||
-rw-r--r-- | dev-python/pyfits/files/pyfits-3.2.1-unbundle-cfitsio.patch | 98 | ||||
-rw-r--r-- | dev-python/pyfits/metadata.xml | 20 | ||||
-rw-r--r-- | dev-python/pyfits/pyfits-3.3-r1.ebuild | 71 | ||||
-rw-r--r-- | dev-python/pyfits/pyfits-3.4-r1.ebuild | 71 |
8 files changed, 512 insertions, 0 deletions
diff --git a/dev-python/pyfits/Manifest b/dev-python/pyfits/Manifest new file mode 100644 index 000000000000..d53072781361 --- /dev/null +++ b/dev-python/pyfits/Manifest @@ -0,0 +1,9 @@ +AUX 01-system-cfitsio.patch 5038 BLAKE2B d6c48057f9efc207e68103d823ca07e0fdddf699451f8389274662b67eb7ac210577c0e9b28529f819f087352e7dc5b5ae7e7aba7f50954238c62ec7581f33f3 SHA512 25369aaf360742b432cd9ad4b4d83c3875dad3eb89daf70483f4dd6a187777a0493f94f365fea171f4adf493d2d5bfcb2223bb362a3fc8aface750c3d29af5b5 +AUX 02-numpy-deprecation-warning.patch 902 BLAKE2B 6f3bcb2c9738f9a24a4d5c1c53bae7cb8b447368320e46ef1958def84de4422f2160f4124d05266ec6177d3de5fc962f0c456c281788cf0322ec359ba2cbae5c SHA512 14123cd3ac5401fe29af59b4d03bc6b8cf2c3f17695cc4d34664298f0031748bc27ff52897e57032bd887743c9acda0c22af16b0a7362898d2d48984fe9c6a2a +AUX 03-fix-for-cfitsio-3380.patch 1496 BLAKE2B bdacc85c1dd1ee28d7c84325646499f2c510e881e3641a0583d4fa56bc02dcedad6a743ad3b6265c664fd2c79804798bf66b4b626d03cbabfef1898e96c1596f SHA512 f3a842f0c9701233e49b22ba6fa8f672fa6374e025614e9c071ea3a54d01033c0f930fc7649cfd42abe65482927b70246762b9f59992790bccf17bc0ce3e0fdc +AUX pyfits-3.2.1-unbundle-cfitsio.patch 2676 BLAKE2B 741df2cbceae943cda462db93d8d337e799ed77a4e5c6b214033ec8829da912d098c02e53e55071b9bf1344cacd2d44244fa1b5606a871ba3a42de97c7ffb85c SHA512 bea17130b7cb3f593ba8e24a699f4a2d58990ee4aace00117beb68498a56c662f90031a8843cb9b388e3dd757bf1efaf2596ba3a69bcc958e0a344e53d3c0675 +DIST pyfits-3.3.tar.gz 1646403 BLAKE2B 6d97198353c93e8d40545bba2677a9f3be5a810c68ddb8b6243debee82fc6ba256ed1a314a42a1c18eb4a2e037f191709bdf17fc08256256d797d7524c84a7f2 SHA512 561fe61050e61745054e0e4712c4413e129293b062d2020219b61d648d7093ce6952e1f26da955a1bf570f76ba7eddeb1805c99f679300b072ef6bacc2e4c90a +DIST pyfits-3.4.tar.gz 1692414 BLAKE2B d3bcd3ce992c63e3a9e520c1bba56bd908590fddc0bfbb35941c7cdf8ff98c384bf5631fe86f8c6c8f292df9a38f299edde431d37a85dce0db1b869b92965bd7 SHA512 b569f871f26dcd9cb2fbe9d823d55c525e8101b0fcf83fff4bc3f3ec4bc7f680953a29634518ea19383f533f5e23b3703fffdb4e0d577b1023b4323254ef3a7e +EBUILD pyfits-3.3-r1.ebuild 1872 BLAKE2B 32afe64d0aaa3c5ffdaac0ac559f0f367ce389686e254a6e723b5aa61fe69d5c01396967e13a2931c5ecf1f94917b4fad0e6c60b7756ac246929db6f484860c9 SHA512 fd1982762c5240caea18c0fc4230ddda4fc2b020ad13631a1e06506c3021e82a61411a94e567cae8298cf29e81a20f1b55fbfcb2d15c957c8d7c13b7327f7ab4 +EBUILD pyfits-3.4-r1.ebuild 1953 BLAKE2B 3ddbf7e4964f6dea87a69e3eda6f16e986ceb2807eebdf8f7ea90aa29fe8a87c5d7b2e173d8407742d472b67abcb40733ac5c51dcd106375fda90ca20dcb7672 SHA512 2cf6243926d07c1e4af1951afc9b33e566382aaa3390f9af8da1eebde59c172415af20926b8383d83894db09f88c5078b665787c407c3249e5ff9bcea603e5d3 +MISC metadata.xml 642 BLAKE2B 553c94afc0e02b2f208c2936603f49777405e08a99b45b254857a960c5d5a8ace8995941603a7069216a93ca2787f681f7a656f3028f987d576a344779eb01e3 SHA512 fd07a54d6f8273f7e16358da22be2f8484f74bacdeb78c35980046256800701b7fc53e7261074fb84651384f2e821ef3fbe62ba3674ca5fc6cd2fc176335da7c diff --git a/dev-python/pyfits/files/01-system-cfitsio.patch b/dev-python/pyfits/files/01-system-cfitsio.patch new file mode 100644 index 000000000000..f2ce935c7ea8 --- /dev/null +++ b/dev-python/pyfits/files/01-system-cfitsio.patch @@ -0,0 +1,176 @@ +From 70fe4dac3f68c3eed369d42e6a49e7865db8b250 Mon Sep 17 00:00:00 2001 +From: SVN-Git Migration <python-modules-team@lists.alioth.debian.org> +Date: Thu, 8 Oct 2015 10:31:01 -0700 +Subject: 01-system-cfitsio.diff + +Patch-Name: 01-system-cfitsio.diff +--- + setup.cfg | 145 +++++++++++++++++++++++++++++++------------------------------- + 1 file changed, 73 insertions(+), 72 deletions(-) + +diff --git a/setup.cfg b/setup.cfg +index 3a05c62..3a64f33 100644 +--- a/setup.cfg ++++ b/setup.cfg +@@ -40,81 +40,81 @@ scripts = + + [extension=pyfits.compression] + sources = +- cextern/cfitsio/adler32.c +- cextern/cfitsio/buffers.c +- cextern/cfitsio/cfileio.c +- cextern/cfitsio/checksum.c +- cextern/cfitsio/crc32.c +- cextern/cfitsio/deflate.c +- cextern/cfitsio/drvrfile.c +- cextern/cfitsio/drvrgsiftp.c +- cextern/cfitsio/drvrmem.c +- cextern/cfitsio/drvrnet.c +- cextern/cfitsio/drvrsmem.c +- cextern/cfitsio/editcol.c +- cextern/cfitsio/edithdu.c +- cextern/cfitsio/eval_f.c +- cextern/cfitsio/eval_l.c +- cextern/cfitsio/eval_y.c +- cextern/cfitsio/fitscore.c +- cextern/cfitsio/fits_hcompress.c +- cextern/cfitsio/fits_hdecompress.c +- cextern/cfitsio/getcolb.c +- cextern/cfitsio/getcol.c +- cextern/cfitsio/getcold.c +- cextern/cfitsio/getcole.c +- cextern/cfitsio/getcoli.c +- cextern/cfitsio/getcolj.c +- cextern/cfitsio/getcolk.c +- cextern/cfitsio/getcoll.c +- cextern/cfitsio/getcolsb.c +- cextern/cfitsio/getcols.c +- cextern/cfitsio/getcolui.c +- cextern/cfitsio/getcoluj.c +- cextern/cfitsio/getcoluk.c +- cextern/cfitsio/getkey.c +- cextern/cfitsio/group.c +- cextern/cfitsio/grparser.c +- cextern/cfitsio/histo.c +- cextern/cfitsio/imcompress.c +- cextern/cfitsio/infback.c +- cextern/cfitsio/inffast.c +- cextern/cfitsio/inflate.c +- cextern/cfitsio/inftrees.c +- cextern/cfitsio/iraffits.c +- cextern/cfitsio/modkey.c +- cextern/cfitsio/pliocomp.c +- cextern/cfitsio/putcolb.c +- cextern/cfitsio/putcol.c +- cextern/cfitsio/putcold.c +- cextern/cfitsio/putcole.c +- cextern/cfitsio/putcoli.c +- cextern/cfitsio/putcolj.c +- cextern/cfitsio/putcolk.c +- cextern/cfitsio/putcoll.c +- cextern/cfitsio/putcolsb.c +- cextern/cfitsio/putcols.c +- cextern/cfitsio/putcolu.c +- cextern/cfitsio/putcolui.c +- cextern/cfitsio/putcoluj.c +- cextern/cfitsio/putcoluk.c +- cextern/cfitsio/putkey.c +- cextern/cfitsio/quantize.c +- cextern/cfitsio/region.c +- cextern/cfitsio/ricecomp.c +- cextern/cfitsio/scalnull.c +- cextern/cfitsio/swapproc.c +- cextern/cfitsio/trees.c +- cextern/cfitsio/uncompr.c +- cextern/cfitsio/wcssub.c +- cextern/cfitsio/wcsutil.c +- cextern/cfitsio/zcompress.c +- cextern/cfitsio/zuncompress.c +- cextern/cfitsio/zutil.c ++# cextern/cfitsio/adler32.c ++# cextern/cfitsio/buffers.c ++# cextern/cfitsio/cfileio.c ++# cextern/cfitsio/checksum.c ++# cextern/cfitsio/crc32.c ++# cextern/cfitsio/deflate.c ++# cextern/cfitsio/drvrfile.c ++# cextern/cfitsio/drvrgsiftp.c ++# cextern/cfitsio/drvrmem.c ++# cextern/cfitsio/drvrnet.c ++# cextern/cfitsio/drvrsmem.c ++# cextern/cfitsio/editcol.c ++# cextern/cfitsio/edithdu.c ++# cextern/cfitsio/eval_f.c ++# cextern/cfitsio/eval_l.c ++# cextern/cfitsio/eval_y.c ++# cextern/cfitsio/fitscore.c ++# cextern/cfitsio/fits_hcompress.c ++# cextern/cfitsio/fits_hdecompress.c ++# cextern/cfitsio/getcolb.c ++# cextern/cfitsio/getcol.c ++# cextern/cfitsio/getcold.c ++# cextern/cfitsio/getcole.c ++# cextern/cfitsio/getcoli.c ++# cextern/cfitsio/getcolj.c ++# cextern/cfitsio/getcolk.c ++# cextern/cfitsio/getcoll.c ++# cextern/cfitsio/getcolsb.c ++# cextern/cfitsio/getcols.c ++# cextern/cfitsio/getcolui.c ++# cextern/cfitsio/getcoluj.c ++# cextern/cfitsio/getcoluk.c ++# cextern/cfitsio/getkey.c ++# cextern/cfitsio/group.c ++# cextern/cfitsio/grparser.c ++# cextern/cfitsio/histo.c ++# cextern/cfitsio/imcompress.c ++# cextern/cfitsio/infback.c ++# cextern/cfitsio/inffast.c ++# cextern/cfitsio/inflate.c ++# cextern/cfitsio/inftrees.c ++# cextern/cfitsio/iraffits.c ++# cextern/cfitsio/modkey.c ++# cextern/cfitsio/pliocomp.c ++# cextern/cfitsio/putcolb.c ++# cextern/cfitsio/putcol.c ++# cextern/cfitsio/putcold.c ++# cextern/cfitsio/putcole.c ++# cextern/cfitsio/putcoli.c ++# cextern/cfitsio/putcolj.c ++# cextern/cfitsio/putcolk.c ++# cextern/cfitsio/putcoll.c ++# cextern/cfitsio/putcolsb.c ++# cextern/cfitsio/putcols.c ++# cextern/cfitsio/putcolu.c ++# cextern/cfitsio/putcolui.c ++# cextern/cfitsio/putcoluj.c ++# cextern/cfitsio/putcoluk.c ++# cextern/cfitsio/putkey.c ++# cextern/cfitsio/quantize.c ++# cextern/cfitsio/region.c ++# cextern/cfitsio/ricecomp.c ++# cextern/cfitsio/scalnull.c ++# cextern/cfitsio/swapproc.c ++# cextern/cfitsio/trees.c ++# cextern/cfitsio/uncompr.c ++# cextern/cfitsio/wcssub.c ++# cextern/cfitsio/wcsutil.c ++# cextern/cfitsio/zcompress.c ++# cextern/cfitsio/zuncompress.c ++# cextern/cfitsio/zutil.c + src/compressionmodule.c + include_dirs = + numpy +- cextern/cfitsio ++# cextern/cfitsio + extra_compile_args = + -Wno-declaration-after-statement + -Wno-unused-variable +@@ -125,6 +125,7 @@ extra_compile_args = + -Wno-unused + -Wno-comments + -Wno-switch ++libraries = cfitsio + optional = True + fail_message = + !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! diff --git a/dev-python/pyfits/files/02-numpy-deprecation-warning.patch b/dev-python/pyfits/files/02-numpy-deprecation-warning.patch new file mode 100644 index 000000000000..026e6b829d4d --- /dev/null +++ b/dev-python/pyfits/files/02-numpy-deprecation-warning.patch @@ -0,0 +1,24 @@ +From 90cac05f8a5436a8dd3714ad29e2d81eb8b4d39b Mon Sep 17 00:00:00 2001 +From: Aurelien Jarno <aurelien@aurel32.net> +Date: Tue, 2 Feb 2016 22:41:09 +0100 +Subject: Avoid DeprecationWarning from Numpy. + +Patch-Name: 02-numpy-deprecation-warning.diff +--- + pyfits/tests/test_division.py | 3 ++- + 1 file changed, 2 insertions(+), 1 deletion(-) + +diff --git a/pyfits/tests/test_division.py b/pyfits/tests/test_division.py +index da4df72..aa93264 100644 +--- a/pyfits/tests/test_division.py ++++ b/pyfits/tests/test_division.py +@@ -18,7 +18,8 @@ class TestDivisionFunctions(PyfitsTestCase): + a1 = np.rec.array( + s, + dtype=np.dtype([('c1', '>i4'), ('c2', '|S3'), +- ('c3', '>f4'), ('c4', '|i1')])) ++ ('c3', '>f4'), ('c4', '|i1')]), ++ shape=len(s) // 12) + + def test_card_with_continue(self): + h = fits.PrimaryHDU() diff --git a/dev-python/pyfits/files/03-fix-for-cfitsio-3380.patch b/dev-python/pyfits/files/03-fix-for-cfitsio-3380.patch new file mode 100644 index 000000000000..d0fac84d1e22 --- /dev/null +++ b/dev-python/pyfits/files/03-fix-for-cfitsio-3380.patch @@ -0,0 +1,43 @@ +Author: Ole Streicher <olebole@debian.org> +Description: Update image tests for cfitsio 3.380 + Make TFORMx check more flexible. The maximal column length in cfitsio + changed between version 3370 and 3380. This patch checks their syntax, + without a specific length. + . + HCOMPRESSed images are allowed to deviate from the original by about + 1/quantize_level of the RMS in each tile. This patch changes the absolute + identity test +Bug: https://github.com/astropy/astropy/issues/4646 +Bug: https://github.com/astropy/astropy/issues/4647 +Bug-Debian: https://bugs.debian.org/816595 +--- a/pyfits/tests/test_image.py ++++ b/pyfits/tests/test_image.py +@@ -2,6 +2,7 @@ + + import math + import os ++import re + import time + import warnings + +@@ -1014,7 +1015,7 @@ + hdu.writeto(self.temp('test.fits')) + + with fits.open(self.temp('test.fits')) as hdul: +- assert (hdul['SCI'].data == cube).all() ++ assert np.abs(hdul['SCI'].data - cube).max() < 1./15. + + def test_subtractive_dither_seed(self): + """ +@@ -1269,8 +1270,8 @@ + + with fits.open(self.temp('test.fits'), + disable_image_compression=True) as h: +- assert h[1].header['TFORM1'] == '1PB(30)' +- assert h[1].header['TFORM2'] == '1PB(359)' ++ assert re.match(r'^1PB\(\d+\)$', h[1].header['TFORM1']) ++ assert re.match(r'^1PB\(\d+\)$', h[1].header['TFORM2']) + + def test_compression_update_header(self): + """Regression test for + diff --git a/dev-python/pyfits/files/pyfits-3.2.1-unbundle-cfitsio.patch b/dev-python/pyfits/files/pyfits-3.2.1-unbundle-cfitsio.patch new file mode 100644 index 000000000000..a5d7e6217486 --- /dev/null +++ b/dev-python/pyfits/files/pyfits-3.2.1-unbundle-cfitsio.patch @@ -0,0 +1,98 @@ +--- setup.cfg.orig 2014-03-10 10:50:38.200531959 -0700 ++++ setup.cfg 2014-03-10 10:52:19.288232002 -0700 +@@ -36,92 +36,12 @@ + + [extension=pyfits.compression] + sources = +- cextern/cfitsio/adler32.c +- cextern/cfitsio/buffers.c +- cextern/cfitsio/cfileio.c +- cextern/cfitsio/checksum.c +- cextern/cfitsio/crc32.c +- cextern/cfitsio/deflate.c +- cextern/cfitsio/drvrfile.c +- cextern/cfitsio/drvrgsiftp.c +- cextern/cfitsio/drvrmem.c +- cextern/cfitsio/drvrnet.c +- cextern/cfitsio/drvrsmem.c +- cextern/cfitsio/editcol.c +- cextern/cfitsio/edithdu.c +- cextern/cfitsio/eval_f.c +- cextern/cfitsio/eval_l.c +- cextern/cfitsio/eval_y.c +- cextern/cfitsio/fitscore.c +- cextern/cfitsio/fits_hcompress.c +- cextern/cfitsio/fits_hdecompress.c +- cextern/cfitsio/getcolb.c +- cextern/cfitsio/getcol.c +- cextern/cfitsio/getcold.c +- cextern/cfitsio/getcole.c +- cextern/cfitsio/getcoli.c +- cextern/cfitsio/getcolj.c +- cextern/cfitsio/getcolk.c +- cextern/cfitsio/getcoll.c +- cextern/cfitsio/getcolsb.c +- cextern/cfitsio/getcols.c +- cextern/cfitsio/getcolui.c +- cextern/cfitsio/getcoluj.c +- cextern/cfitsio/getcoluk.c +- cextern/cfitsio/getkey.c +- cextern/cfitsio/group.c +- cextern/cfitsio/grparser.c +- cextern/cfitsio/histo.c +- cextern/cfitsio/imcompress.c +- cextern/cfitsio/infback.c +- cextern/cfitsio/inffast.c +- cextern/cfitsio/inflate.c +- cextern/cfitsio/inftrees.c +- cextern/cfitsio/iraffits.c +- cextern/cfitsio/modkey.c +- cextern/cfitsio/pliocomp.c +- cextern/cfitsio/putcolb.c +- cextern/cfitsio/putcol.c +- cextern/cfitsio/putcold.c +- cextern/cfitsio/putcole.c +- cextern/cfitsio/putcoli.c +- cextern/cfitsio/putcolj.c +- cextern/cfitsio/putcolk.c +- cextern/cfitsio/putcoll.c +- cextern/cfitsio/putcolsb.c +- cextern/cfitsio/putcols.c +- cextern/cfitsio/putcolu.c +- cextern/cfitsio/putcolui.c +- cextern/cfitsio/putcoluj.c +- cextern/cfitsio/putcoluk.c +- cextern/cfitsio/putkey.c +- cextern/cfitsio/quantize.c +- cextern/cfitsio/region.c +- cextern/cfitsio/ricecomp.c +- cextern/cfitsio/scalnull.c +- cextern/cfitsio/swapproc.c +- cextern/cfitsio/trees.c +- cextern/cfitsio/uncompr.c +- cextern/cfitsio/wcssub.c +- cextern/cfitsio/wcsutil.c +- cextern/cfitsio/zcompress.c +- cextern/cfitsio/zuncompress.c +- cextern/cfitsio/zutil.c + src/compressionmodule.c + include_dirs = + numpy +- cextern/cfitsio +-extra_compile_args = +- -Wno-declaration-after-statement +- -Wno-unused-variable +- -Wno-parentheses +- -Wno-uninitialized +- -Wno-format +- -Wno-strict-prototypes +- -Wno-unused +- -Wno-comments +- -Wno-switch +-optional = True ++libraries = ++ cfitsio ++optional = False + fail_message = + !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! + Failed to build PyFITS tile compression support. PyFITS will still diff --git a/dev-python/pyfits/metadata.xml b/dev-python/pyfits/metadata.xml new file mode 100644 index 000000000000..4e1c8e2ff441 --- /dev/null +++ b/dev-python/pyfits/metadata.xml @@ -0,0 +1,20 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> +<pkgmetadata> + <maintainer type="project"> + <email>sci-astronomy@gentoo.org</email> + <name>Gentoo Astronomy Project</name> + </maintainer> + <maintainer type="project"> + <email>python@gentoo.org</email> + <name>Python</name> + </maintainer> + <longdescription lang="en"> + PyFITS provides an interface to FITS formatted files under the + Python scripting language and PyRAF, the Python-based interface to + IRAF. +</longdescription> + <upstream> + <remote-id type="pypi">pyfits</remote-id> + </upstream> +</pkgmetadata> diff --git a/dev-python/pyfits/pyfits-3.3-r1.ebuild b/dev-python/pyfits/pyfits-3.3-r1.ebuild new file mode 100644 index 000000000000..b1f133fb4313 --- /dev/null +++ b/dev-python/pyfits/pyfits-3.3-r1.ebuild @@ -0,0 +1,71 @@ +# Copyright 1999-2018 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 + +EAPI=5 + +PYTHON_COMPAT=( python2_7 python3_{4,5} ) + +inherit distutils-r1 eutils multilib + +DESCRIPTION="Provides an interface to FITS formatted files under python" +HOMEPAGE="http://www.stsci.edu/resources/software_hardware/pyfits" +SRC_URI="mirror://pypi/p/${PN}/${P}.tar.gz" + +LICENSE="BSD" +SLOT="0" +KEYWORDS="amd64 x86 ~x86-fbsd ~amd64-linux ~x86-linux" +IUSE="doc test" + +RDEPEND=" + dev-python/numpy[${PYTHON_USEDEP}] + sci-libs/cfitsio:0=" +DEPEND="${RDEPEND} + dev-python/setuptools[${PYTHON_USEDEP}] + >=dev-python/d2to1-0.2.5[${PYTHON_USEDEP}] + >=dev-python/stsci-distutils-0.3[${PYTHON_USEDEP}] + doc? ( + dev-python/matplotlib[${PYTHON_USEDEP}] + $(python_gen_cond_dep 'dev-python/numpydoc[${PYTHON_USEDEP}]' 'python*') + dev-python/sphinxcontrib-programoutput[${PYTHON_USEDEP}] + dev-python/stsci-sphinxext[${PYTHON_USEDEP}] + ) + test? ( dev-python/nose[${PYTHON_USEDEP}] )" + +PATCHES=( "${FILESDIR}"/${PN}-3.2.1-unbundle-cfitsio.patch ) + +python_prepare_all() { + sed -i \ + -e "s/\(hook_package_dir = \)lib/\1$(get_libdir)/g" \ + "${S}"/setup.cfg || die + + # https://github.com/spacetelescope/PyFITS/issues/95 + sed \ + -e "s/except UserWarning, w/except UserWarning as w/" \ + -i lib/pyfits/scripts/fitscheck.py || die + + distutils-r1_python_prepare_all +} + +python_compile_all() { + use doc && emake -C docs html +} + +python_test() { + cd "${BUILD_DIR}"/lib* || die + nosetests --verbose || die +} + +python_install() { + distutils-r1_python_install + local binary + for binary in "${ED}"/usr/bin/* "${D}$(python_get_scriptdir)"/*; do + einfo "Renaming ${binary} to ${binary}-${PN}" + mv ${binary}{,-${PN}} || die "failed renaming" + done +} + +python_install_all() { + use doc && local HTML_DOCS=( docs/build/html/. ) + DOCS=( FAQ.txt CHANGES.txt ) + distutils-r1_python_install_all +} diff --git a/dev-python/pyfits/pyfits-3.4-r1.ebuild b/dev-python/pyfits/pyfits-3.4-r1.ebuild new file mode 100644 index 000000000000..beb1907949d4 --- /dev/null +++ b/dev-python/pyfits/pyfits-3.4-r1.ebuild @@ -0,0 +1,71 @@ +# Copyright 1999-2018 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 + +EAPI=6 + +PYTHON_COMPAT=( python2_7 python3_{4,5,6} ) + +inherit distutils-r1 eutils multilib + +DESCRIPTION="Provides an interface to FITS formatted files under python" +HOMEPAGE="http://www.stsci.edu/resources/software_hardware/pyfits" +SRC_URI="mirror://pypi/p/${PN}/${P}.tar.gz" + +LICENSE="BSD" +SLOT="0" +KEYWORDS="amd64 ~x86 ~x86-fbsd ~amd64-linux ~x86-linux" +IUSE="doc test" + +RDEPEND=" + dev-python/numpy[${PYTHON_USEDEP}] + sci-libs/cfitsio:0=" +DEPEND="${RDEPEND} + dev-python/setuptools[${PYTHON_USEDEP}] + >=dev-python/d2to1-0.2.5[${PYTHON_USEDEP}] + >=dev-python/stsci-distutils-0.3[${PYTHON_USEDEP}] + doc? ( + dev-python/matplotlib[${PYTHON_USEDEP}] + $(python_gen_cond_dep 'dev-python/numpydoc[${PYTHON_USEDEP}]' 'python*') + dev-python/sphinxcontrib-programoutput[${PYTHON_USEDEP}] + dev-python/stsci-sphinxext[${PYTHON_USEDEP}] + ) + test? ( dev-python/nose[${PYTHON_USEDEP}] )" + +PATCHES=( "${FILESDIR}"/01-system-cfitsio.patch + "${FILESDIR}"/02-numpy-deprecation-warning.patch + "${FILESDIR}"/03-fix-for-cfitsio-3380.patch ) + +python_prepare_all() { + sed -e "s/\(hook_package_dir = \)lib/\1$(get_libdir)/g" \ + -i "${S}"/setup.cfg || die + + # https://github.com/spacetelescope/PyFITS/issues/95 + sed -e "s/except UserWarning, w/except UserWarning as w/" \ + -i pyfits/scripts/fitscheck.py || die + + distutils-r1_python_prepare_all +} + +python_compile_all() { + use doc && emake -C docs html +} + +python_test() { + cd "${BUILD_DIR}"/lib* || die + nosetests --verbose || die +} + +python_install() { + distutils-r1_python_install + local binary + for binary in "${ED}"/usr/bin/* "${D}$(python_get_scriptdir)"/*; do + einfo "Renaming ${binary} to ${binary}-${PN}" + mv ${binary}{,-${PN}} || die "failed renaming" + done +} + +python_install_all() { + use doc && local HTML_DOCS=( docs/build/html/. ) + DOCS=( FAQ.txt CHANGES.txt ) + distutils-r1_python_install_all +} |