diff options
author | V3n3RiX <venerix@redcorelinux.org> | 2021-05-22 07:31:18 +0100 |
---|---|---|
committer | V3n3RiX <venerix@redcorelinux.org> | 2021-05-22 07:31:18 +0100 |
commit | 908778078736bd36f7a60a2d576d415cb8e000fa (patch) | |
tree | c6a4796c48b608c14dc7e9674cdbd38f905e3c15 /metadata/md5-cache/sci-biology | |
parent | 185fa19bbf68a4d4dca534d2b46729207a177f16 (diff) |
gentoo resync : 22.05.2021
Diffstat (limited to 'metadata/md5-cache/sci-biology')
19 files changed, 21 insertions, 21 deletions
diff --git a/metadata/md5-cache/sci-biology/GBrowse-2.48-r1 b/metadata/md5-cache/sci-biology/GBrowse-2.48-r1 index ee6344141b3c..fdb641ae9770 100644 --- a/metadata/md5-cache/sci-biology/GBrowse-2.48-r1 +++ b/metadata/md5-cache/sci-biology/GBrowse-2.48-r1 @@ -9,5 +9,5 @@ LICENSE=|| ( Artistic GPL-1+ ) RDEPEND=!<sci-biology/GBrowse-2.44-r1 >=sci-biology/bioperl-1.6.9 >=dev-perl/Bio-Graphics-2.09 >=dev-perl/GD-2.07 >=dev-perl/CGI-Session-4.02 dev-perl/IO-String dev-perl/JSON dev-perl/libwww-perl dev-perl/Statistics-Descriptive !minimal? ( dev-perl/Bio-Das >=dev-perl/Bio-SamTools-1.20 dev-perl/Crypt-SSLeay dev-perl/DB_File-Lock dev-perl/DBI mysql? ( dev-perl/DBD-mysql ) postgres? ( dev-perl/DBD-Pg ) sqlite? ( dev-perl/DBD-SQLite ) dev-perl/FCGI dev-perl/File-NFSLock dev-perl/GD-SVG dev-perl/Net-OpenID-Consumer dev-perl/Net-SMTP-SSL ) dev-lang/perl:=[-build(-)] >=app-admin/webapp-config-1.50.15 SLOT=0 SRC_URI=mirror://cpan/authors/id/L/LD/LDS/GBrowse-2.48.tar.gz -_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 2d5b3f4b315094768576b6799e4f926e l10n 8cdd85e169b835d518bc2fd59f780d8e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib d410501a125f99ffb560b0c523cd3d1e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b perl-module 58b5d72d607014c48b5a1e106318d584 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 24921b57d6561d87cbef4916a296ada4 unpacker 517f16af48ee3ab88180dd58b5143213 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf webapp 990ad6a000cf18d1ef87117e8c7b0a54 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 2d5b3f4b315094768576b6799e4f926e l10n 8cdd85e169b835d518bc2fd59f780d8e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib d410501a125f99ffb560b0c523cd3d1e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions f1ee42d38920b69fd6b6229cef80b7f4 perl-module 58b5d72d607014c48b5a1e106318d584 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 24921b57d6561d87cbef4916a296ada4 unpacker 517f16af48ee3ab88180dd58b5143213 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf webapp 990ad6a000cf18d1ef87117e8c7b0a54 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=bccaeef3292f6df307fc14fb5a2a74b2 diff --git a/metadata/md5-cache/sci-biology/HTSeq-0.12.4 b/metadata/md5-cache/sci-biology/HTSeq-0.12.4 index 2f2031ee62a6..5d27da52fd73 100644 --- a/metadata/md5-cache/sci-biology/HTSeq-0.12.4 +++ b/metadata/md5-cache/sci-biology/HTSeq-0.12.4 @@ -11,5 +11,5 @@ RDEPEND=dev-python/numpy[python_targets_python3_7(-)?,python_targets_python3_8(- REQUIRED_USE=|| ( python_targets_python3_7 python_targets_python3_8 python_targets_python3_9 ) SLOT=0 SRC_URI=https://github.com/htseq/htseq/archive/release_0.12.4.tar.gz -> HTSeq-0.12.4.tar.gz -_eclasses_=distutils-r1 f0ca511df3fddd316b783632b804e8fb multibuild 6b3d5ee849dafe6cdfd7b859c211fb01 multilib d410501a125f99ffb560b0c523cd3d1e multiprocessing cac3169468f893670dac3e7cb940e045 python-r1 26e4ad0a4190b14f70973dc253e86535 python-utils-r1 20c4a380a6193a089c8c432f3e5f8402 toolchain-funcs 24921b57d6561d87cbef4916a296ada4 +_eclasses_=distutils-r1 f0ca511df3fddd316b783632b804e8fb multibuild 6b3d5ee849dafe6cdfd7b859c211fb01 multilib d410501a125f99ffb560b0c523cd3d1e multiprocessing cac3169468f893670dac3e7cb940e045 python-r1 26e4ad0a4190b14f70973dc253e86535 python-utils-r1 d273d56dc725880edbeb1f6389faf5f1 toolchain-funcs 24921b57d6561d87cbef4916a296ada4 _md5_=ae9941d3e3234244619fdcb2b46c8e90 diff --git a/metadata/md5-cache/sci-biology/HTSeq-9999 b/metadata/md5-cache/sci-biology/HTSeq-9999 index fb1934b346a0..550cc83a71aa 100644 --- a/metadata/md5-cache/sci-biology/HTSeq-9999 +++ b/metadata/md5-cache/sci-biology/HTSeq-9999 @@ -10,5 +10,5 @@ PROPERTIES=live RDEPEND=dev-python/numpy[python_targets_python3_7(-)?,python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_7(-),-python_single_target_python3_8(-),-python_single_target_python3_9(-)] dev-python/matplotlib[python_targets_python3_7(-)?,python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_7(-),-python_single_target_python3_8(-),-python_single_target_python3_9(-)] sci-biology/pysam[python_targets_python3_7(-)?,python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_7(-),-python_single_target_python3_8(-),-python_single_target_python3_9(-)] python_targets_python3_7? ( dev-lang/python:3.7 ) python_targets_python3_8? ( dev-lang/python:3.8 ) python_targets_python3_9? ( dev-lang/python:3.9 ) >=dev-lang/python-exec-2:=[python_targets_python3_7(-)?,python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_7(-),-python_single_target_python3_8(-),-python_single_target_python3_9(-)] REQUIRED_USE=|| ( python_targets_python3_7 python_targets_python3_8 python_targets_python3_9 ) SLOT=0 -_eclasses_=distutils-r1 f0ca511df3fddd316b783632b804e8fb git-r3 b8e8c92aa5fe8df7187e466138eb4e52 multibuild 6b3d5ee849dafe6cdfd7b859c211fb01 multilib d410501a125f99ffb560b0c523cd3d1e multiprocessing cac3169468f893670dac3e7cb940e045 python-r1 26e4ad0a4190b14f70973dc253e86535 python-utils-r1 20c4a380a6193a089c8c432f3e5f8402 toolchain-funcs 24921b57d6561d87cbef4916a296ada4 +_eclasses_=distutils-r1 f0ca511df3fddd316b783632b804e8fb git-r3 b8e8c92aa5fe8df7187e466138eb4e52 multibuild 6b3d5ee849dafe6cdfd7b859c211fb01 multilib d410501a125f99ffb560b0c523cd3d1e multiprocessing cac3169468f893670dac3e7cb940e045 python-r1 26e4ad0a4190b14f70973dc253e86535 python-utils-r1 d273d56dc725880edbeb1f6389faf5f1 toolchain-funcs 24921b57d6561d87cbef4916a296ada4 _md5_=ae9941d3e3234244619fdcb2b46c8e90 diff --git a/metadata/md5-cache/sci-biology/Manifest.gz b/metadata/md5-cache/sci-biology/Manifest.gz Binary files differindex 70cbe97ecfdc..08cd79fd7d46 100644 --- a/metadata/md5-cache/sci-biology/Manifest.gz +++ b/metadata/md5-cache/sci-biology/Manifest.gz diff --git a/metadata/md5-cache/sci-biology/bcftools-1.10.2 b/metadata/md5-cache/sci-biology/bcftools-1.10.2 index 4fab2936e347..d6e473932d6d 100644 --- a/metadata/md5-cache/sci-biology/bcftools-1.10.2 +++ b/metadata/md5-cache/sci-biology/bcftools-1.10.2 @@ -10,5 +10,5 @@ RDEPEND=dev-lang/perl python_single_target_python3_7? ( dev-python/matplotlib[py REQUIRED_USE=^^ ( python_single_target_python3_7 python_single_target_python3_8 python_single_target_python3_9 ) SLOT=0 SRC_URI=https://github.com/samtools/bcftools/releases/download/1.10.2/bcftools-1.10.2.tar.bz2 -_eclasses_=multilib d410501a125f99ffb560b0c523cd3d1e python-single-r1 d25ac9d5d91fe9d44fda6ec192aca11a python-utils-r1 20c4a380a6193a089c8c432f3e5f8402 toolchain-funcs 24921b57d6561d87cbef4916a296ada4 +_eclasses_=multilib d410501a125f99ffb560b0c523cd3d1e python-single-r1 d25ac9d5d91fe9d44fda6ec192aca11a python-utils-r1 d273d56dc725880edbeb1f6389faf5f1 toolchain-funcs 24921b57d6561d87cbef4916a296ada4 _md5_=2fd4d2217632ea38f3b2adae16fec9fb diff --git a/metadata/md5-cache/sci-biology/bedtools-2.29.2 b/metadata/md5-cache/sci-biology/bedtools-2.29.2 index 3042ee9e655c..6e76314e0185 100644 --- a/metadata/md5-cache/sci-biology/bedtools-2.29.2 +++ b/metadata/md5-cache/sci-biology/bedtools-2.29.2 @@ -11,5 +11,5 @@ RDEPEND=app-arch/bzip2 app-arch/xz-utils sys-libs/zlib RESTRICT=!test? ( test ) SLOT=0 SRC_URI=https://github.com/arq5x/bedtools2/releases/download/v2.29.2/bedtools-2.29.2.tar.gz -_eclasses_=multilib d410501a125f99ffb560b0c523cd3d1e python-any-r1 17241a11501065ff3651350040875aa9 python-utils-r1 20c4a380a6193a089c8c432f3e5f8402 toolchain-funcs 24921b57d6561d87cbef4916a296ada4 +_eclasses_=multilib d410501a125f99ffb560b0c523cd3d1e python-any-r1 17241a11501065ff3651350040875aa9 python-utils-r1 d273d56dc725880edbeb1f6389faf5f1 toolchain-funcs 24921b57d6561d87cbef4916a296ada4 _md5_=f3eef2425b0d021201cd5bb705836375 diff --git a/metadata/md5-cache/sci-biology/bedtools-2.30.0 b/metadata/md5-cache/sci-biology/bedtools-2.30.0 index 2b846f164ad3..462ef6222952 100644 --- a/metadata/md5-cache/sci-biology/bedtools-2.30.0 +++ b/metadata/md5-cache/sci-biology/bedtools-2.30.0 @@ -11,5 +11,5 @@ RDEPEND=app-arch/bzip2 app-arch/xz-utils sys-libs/zlib RESTRICT=!test? ( test ) SLOT=0 SRC_URI=https://github.com/arq5x/bedtools2/releases/download/v2.30.0/bedtools-2.30.0.tar.gz -_eclasses_=multilib d410501a125f99ffb560b0c523cd3d1e python-any-r1 17241a11501065ff3651350040875aa9 python-utils-r1 20c4a380a6193a089c8c432f3e5f8402 toolchain-funcs 24921b57d6561d87cbef4916a296ada4 +_eclasses_=multilib d410501a125f99ffb560b0c523cd3d1e python-any-r1 17241a11501065ff3651350040875aa9 python-utils-r1 d273d56dc725880edbeb1f6389faf5f1 toolchain-funcs 24921b57d6561d87cbef4916a296ada4 _md5_=14bf1e3697276975f4e8b47a297b1bf5 diff --git a/metadata/md5-cache/sci-biology/biopandas-0.2.7 b/metadata/md5-cache/sci-biology/biopandas-0.2.7 index 9133765ad38f..adf57b2af9d5 100644 --- a/metadata/md5-cache/sci-biology/biopandas-0.2.7 +++ b/metadata/md5-cache/sci-biology/biopandas-0.2.7 @@ -11,5 +11,5 @@ REQUIRED_USE=|| ( python_targets_python3_7 python_targets_python3_8 python_targe RESTRICT=!test? ( test ) !test? ( test ) SLOT=0 SRC_URI=mirror://pypi/B/BioPandas/biopandas-0.2.7.tar.gz -_eclasses_=distutils-r1 f0ca511df3fddd316b783632b804e8fb multibuild 6b3d5ee849dafe6cdfd7b859c211fb01 multilib d410501a125f99ffb560b0c523cd3d1e multiprocessing cac3169468f893670dac3e7cb940e045 python-r1 26e4ad0a4190b14f70973dc253e86535 python-utils-r1 20c4a380a6193a089c8c432f3e5f8402 toolchain-funcs 24921b57d6561d87cbef4916a296ada4 +_eclasses_=distutils-r1 f0ca511df3fddd316b783632b804e8fb multibuild 6b3d5ee849dafe6cdfd7b859c211fb01 multilib d410501a125f99ffb560b0c523cd3d1e multiprocessing cac3169468f893670dac3e7cb940e045 python-r1 26e4ad0a4190b14f70973dc253e86535 python-utils-r1 d273d56dc725880edbeb1f6389faf5f1 toolchain-funcs 24921b57d6561d87cbef4916a296ada4 _md5_=6e4b8600d4f3c3ac26b099a9c4577ca0 diff --git a/metadata/md5-cache/sci-biology/bioperl-1.6.9 b/metadata/md5-cache/sci-biology/bioperl-1.6.9 index 6c09c1ae2cca..ecdcc54e322f 100644 --- a/metadata/md5-cache/sci-biology/bioperl-1.6.9 +++ b/metadata/md5-cache/sci-biology/bioperl-1.6.9 @@ -11,5 +11,5 @@ RDEPEND=dev-perl/libwww-perl !minimal? ( dev-perl/Algorithm-Munkres dev-perl/Arr REQUIRED_USE=minimal? ( !graphviz ) SLOT=0 SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-1.6.901.tar.gz -_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 2d5b3f4b315094768576b6799e4f926e l10n 8cdd85e169b835d518bc2fd59f780d8e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib d410501a125f99ffb560b0c523cd3d1e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b perl-module 58b5d72d607014c48b5a1e106318d584 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 24921b57d6561d87cbef4916a296ada4 unpacker 517f16af48ee3ab88180dd58b5143213 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 2d5b3f4b315094768576b6799e4f926e l10n 8cdd85e169b835d518bc2fd59f780d8e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib d410501a125f99ffb560b0c523cd3d1e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions f1ee42d38920b69fd6b6229cef80b7f4 perl-module 58b5d72d607014c48b5a1e106318d584 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 24921b57d6561d87cbef4916a296ada4 unpacker 517f16af48ee3ab88180dd58b5143213 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=8a48cf5c6cd3d568ec12cc4fdb88021b diff --git a/metadata/md5-cache/sci-biology/bioperl-db-1.6.9 b/metadata/md5-cache/sci-biology/bioperl-db-1.6.9 index 27a8ab54cecc..22e747ae94ec 100644 --- a/metadata/md5-cache/sci-biology/bioperl-db-1.6.9 +++ b/metadata/md5-cache/sci-biology/bioperl-db-1.6.9 @@ -10,5 +10,5 @@ RDEPEND=>=sci-biology/bioperl-1.6.9 dev-perl/DBD-mysql dev-perl/DBI sci-biology/ RESTRICT=test SLOT=0 SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-DB-1.006900.tar.gz -_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 2d5b3f4b315094768576b6799e4f926e l10n 8cdd85e169b835d518bc2fd59f780d8e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib d410501a125f99ffb560b0c523cd3d1e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b perl-module 58b5d72d607014c48b5a1e106318d584 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 24921b57d6561d87cbef4916a296ada4 unpacker 517f16af48ee3ab88180dd58b5143213 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 2d5b3f4b315094768576b6799e4f926e l10n 8cdd85e169b835d518bc2fd59f780d8e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib d410501a125f99ffb560b0c523cd3d1e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions f1ee42d38920b69fd6b6229cef80b7f4 perl-module 58b5d72d607014c48b5a1e106318d584 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 24921b57d6561d87cbef4916a296ada4 unpacker 517f16af48ee3ab88180dd58b5143213 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=2470d7ecf1b6ff1902a8d74057748480 diff --git a/metadata/md5-cache/sci-biology/bioperl-db-1.6.9-r1 b/metadata/md5-cache/sci-biology/bioperl-db-1.6.9-r1 index 676246691ecb..f02a3037cea3 100644 --- a/metadata/md5-cache/sci-biology/bioperl-db-1.6.9-r1 +++ b/metadata/md5-cache/sci-biology/bioperl-db-1.6.9-r1 @@ -10,5 +10,5 @@ RDEPEND=>=sci-biology/bioperl-1.6.9 dev-perl/DBD-mysql dev-perl/DBI sci-biology/ RESTRICT=test SLOT=0 SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-DB-1.006900.tar.gz -_eclasses_=multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b perl-module 58b5d72d607014c48b5a1e106318d584 +_eclasses_=multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions f1ee42d38920b69fd6b6229cef80b7f4 perl-module 58b5d72d607014c48b5a1e106318d584 _md5_=d406c809bbde4bce1c891731bbbd6803 diff --git a/metadata/md5-cache/sci-biology/bioperl-network-1.6.9 b/metadata/md5-cache/sci-biology/bioperl-network-1.6.9 index a9309eb1fc19..98acf99c2819 100644 --- a/metadata/md5-cache/sci-biology/bioperl-network-1.6.9 +++ b/metadata/md5-cache/sci-biology/bioperl-network-1.6.9 @@ -10,5 +10,5 @@ RDEPEND=>=sci-biology/bioperl-1.6.9 >=dev-perl/Graph-0.86 dev-lang/perl:=[-build RESTRICT=!test? ( test ) SLOT=0 SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-Network-1.006900.tar.gz -_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 2d5b3f4b315094768576b6799e4f926e l10n 8cdd85e169b835d518bc2fd59f780d8e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib d410501a125f99ffb560b0c523cd3d1e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b perl-module 58b5d72d607014c48b5a1e106318d584 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 24921b57d6561d87cbef4916a296ada4 unpacker 517f16af48ee3ab88180dd58b5143213 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 2d5b3f4b315094768576b6799e4f926e l10n 8cdd85e169b835d518bc2fd59f780d8e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib d410501a125f99ffb560b0c523cd3d1e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions f1ee42d38920b69fd6b6229cef80b7f4 perl-module 58b5d72d607014c48b5a1e106318d584 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 24921b57d6561d87cbef4916a296ada4 unpacker 517f16af48ee3ab88180dd58b5143213 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=8f7c4053ffbec76cfad29cca2d99847b diff --git a/metadata/md5-cache/sci-biology/bioperl-run-1.6.9 b/metadata/md5-cache/sci-biology/bioperl-run-1.6.9 index 4ba2bd9cb6d3..32b342d46f5e 100644 --- a/metadata/md5-cache/sci-biology/bioperl-run-1.6.9 +++ b/metadata/md5-cache/sci-biology/bioperl-run-1.6.9 @@ -10,5 +10,5 @@ RDEPEND=>=sci-biology/bioperl-1.6.9 !minimal? ( dev-perl/Algorithm-Diff dev-perl RESTRICT=test SLOT=0 SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-Run-1.006900.tar.gz -_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 2d5b3f4b315094768576b6799e4f926e l10n 8cdd85e169b835d518bc2fd59f780d8e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib d410501a125f99ffb560b0c523cd3d1e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b perl-module 58b5d72d607014c48b5a1e106318d584 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 24921b57d6561d87cbef4916a296ada4 unpacker 517f16af48ee3ab88180dd58b5143213 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 2d5b3f4b315094768576b6799e4f926e l10n 8cdd85e169b835d518bc2fd59f780d8e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib d410501a125f99ffb560b0c523cd3d1e multiprocessing cac3169468f893670dac3e7cb940e045 perl-functions f1ee42d38920b69fd6b6229cef80b7f4 perl-module 58b5d72d607014c48b5a1e106318d584 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 24921b57d6561d87cbef4916a296ada4 unpacker 517f16af48ee3ab88180dd58b5143213 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=9caec4e5b47cbf306a1689903f2a018a diff --git a/metadata/md5-cache/sci-biology/biopython-1.77 b/metadata/md5-cache/sci-biology/biopython-1.77 index a2986910f006..a344359d5e84 100644 --- a/metadata/md5-cache/sci-biology/biopython-1.77 +++ b/metadata/md5-cache/sci-biology/biopython-1.77 @@ -11,5 +11,5 @@ RDEPEND=dev-python/matplotlib[python_targets_python3_7(-)?,python_targets_python REQUIRED_USE=|| ( python_targets_python3_7 python_targets_python3_8 python_targets_python3_9 ) SLOT=0 SRC_URI=mirror://pypi/b/biopython/biopython-1.77.tar.gz -_eclasses_=distutils-r1 f0ca511df3fddd316b783632b804e8fb multibuild 6b3d5ee849dafe6cdfd7b859c211fb01 multilib d410501a125f99ffb560b0c523cd3d1e multiprocessing cac3169468f893670dac3e7cb940e045 optfeature e142388219c7fee6ff016fe1c78a10a5 python-r1 26e4ad0a4190b14f70973dc253e86535 python-utils-r1 20c4a380a6193a089c8c432f3e5f8402 toolchain-funcs 24921b57d6561d87cbef4916a296ada4 +_eclasses_=distutils-r1 f0ca511df3fddd316b783632b804e8fb multibuild 6b3d5ee849dafe6cdfd7b859c211fb01 multilib d410501a125f99ffb560b0c523cd3d1e multiprocessing cac3169468f893670dac3e7cb940e045 optfeature e142388219c7fee6ff016fe1c78a10a5 python-r1 26e4ad0a4190b14f70973dc253e86535 python-utils-r1 d273d56dc725880edbeb1f6389faf5f1 toolchain-funcs 24921b57d6561d87cbef4916a296ada4 _md5_=7f5250b5ff62ae5ff155616d0b65204b diff --git a/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660 b/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660 index ab8903d31f6f..c149cdc1422c 100644 --- a/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660 +++ b/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660 @@ -1,14 +1,14 @@ BDEPEND=sys-devel/gnuconfig >=app-portage/elt-patches-20170815 || ( >=sys-devel/automake-1.16.2-r1:1.16 ) >=sys-devel/autoconf-2.69 >=sys-devel/libtool-2.4 DEFINED_PHASES=configure install prepare -DEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] +DEPEND=sys-libs/ncurses:0= dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] DESCRIPTION=EMBOSS integrated version of MSE - Multiple Sequence Screen Editor EAPI=7 HOMEPAGE=http://emboss.sourceforge.net/ -IUSE=ncurses mysql pdf png postgres X +IUSE=mysql pdf png postgres X KEYWORDS=~amd64 ~x86 ~x86-linux LICENSE=LGPL-2 GPL-2 -RDEPEND=ncurses? ( sys-libs/ncurses:0= ) dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] +RDEPEND=sys-libs/ncurses:0= dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/MSE-3.0.0.660.tar.gz -> embassy-mse-3.0.0.660.tar.gz _eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 93f4f6ac626ed63f042344dd76574b41 eutils 2d5b3f4b315094768576b6799e4f926e flag-o-matic bc2e7662a4a9a8643be851982a837ddc gnuconfig 9f91b4b0c84e734a87492d4293f03de5 l10n 8cdd85e169b835d518bc2fd59f780d8e libtool f143db5a74ccd9ca28c1234deffede96 multilib d410501a125f99ffb560b0c523cd3d1e toolchain-funcs 24921b57d6561d87cbef4916a296ada4 wrapper 4251d4c84c25f59094fd557e0063a974 -_md5_=d12c79c0d0054aecac7a987e9b5f5655 +_md5_=c9843cceb68b918a80ed15c2043942d3 diff --git a/metadata/md5-cache/sci-biology/pysam-0.16.0.1 b/metadata/md5-cache/sci-biology/pysam-0.16.0.1 index 6a5b91290ec0..96c3e56250e7 100644 --- a/metadata/md5-cache/sci-biology/pysam-0.16.0.1 +++ b/metadata/md5-cache/sci-biology/pysam-0.16.0.1 @@ -12,5 +12,5 @@ REQUIRED_USE=|| ( python_targets_python3_7 python_targets_python3_8 python_targe RESTRICT=!test? ( test ) SLOT=0 SRC_URI=https://github.com/pysam-developers/pysam/archive/v0.16.0.1.tar.gz -> pysam-0.16.0.1.tar.gz -_eclasses_=distutils-r1 f0ca511df3fddd316b783632b804e8fb multibuild 6b3d5ee849dafe6cdfd7b859c211fb01 multilib d410501a125f99ffb560b0c523cd3d1e multiprocessing cac3169468f893670dac3e7cb940e045 python-r1 26e4ad0a4190b14f70973dc253e86535 python-utils-r1 20c4a380a6193a089c8c432f3e5f8402 toolchain-funcs 24921b57d6561d87cbef4916a296ada4 +_eclasses_=distutils-r1 f0ca511df3fddd316b783632b804e8fb multibuild 6b3d5ee849dafe6cdfd7b859c211fb01 multilib d410501a125f99ffb560b0c523cd3d1e multiprocessing cac3169468f893670dac3e7cb940e045 python-r1 26e4ad0a4190b14f70973dc253e86535 python-utils-r1 d273d56dc725880edbeb1f6389faf5f1 toolchain-funcs 24921b57d6561d87cbef4916a296ada4 _md5_=24cbd77fb49bf7dfa36311bf5973256d diff --git a/metadata/md5-cache/sci-biology/samtools-0.1.20-r4 b/metadata/md5-cache/sci-biology/samtools-0.1.20-r4 index f1c2f9df0717..968439dc652a 100644 --- a/metadata/md5-cache/sci-biology/samtools-0.1.20-r4 +++ b/metadata/md5-cache/sci-biology/samtools-0.1.20-r4 @@ -10,4 +10,4 @@ RDEPEND=sys-libs/ncurses:0= dev-lang/perl SLOT=0.1-legacy SRC_URI=https://github.com/samtools/samtools/archive/0.1.20.tar.gz -> samtools-0.1.20.tar.gz _eclasses_=multilib d410501a125f99ffb560b0c523cd3d1e toolchain-funcs 24921b57d6561d87cbef4916a296ada4 -_md5_=6fc0899be7ff3370d9a4ac561b8f39a8 +_md5_=89941c8b8d527ccc386063a3f533ef77 diff --git a/metadata/md5-cache/sci-biology/trnascan-se-1.31 b/metadata/md5-cache/sci-biology/trnascan-se-1.31 index 52825f3a5bf7..1705948f7f1d 100644 --- a/metadata/md5-cache/sci-biology/trnascan-se-1.31 +++ b/metadata/md5-cache/sci-biology/trnascan-se-1.31 @@ -6,5 +6,5 @@ KEYWORDS=amd64 x86 LICENSE=GPL-2 SLOT=0 SRC_URI=http://lowelab.ucsc.edu/software/tRNAscan-SE.tar.gz -> trnascan-se-1.31.tar.gz -_eclasses_=multilib d410501a125f99ffb560b0c523cd3d1e perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b toolchain-funcs 24921b57d6561d87cbef4916a296ada4 +_eclasses_=multilib d410501a125f99ffb560b0c523cd3d1e perl-functions f1ee42d38920b69fd6b6229cef80b7f4 toolchain-funcs 24921b57d6561d87cbef4916a296ada4 _md5_=3f4bcdf31fe276f90a95e2f4b311deae diff --git a/metadata/md5-cache/sci-biology/vcftools-0.1.14 b/metadata/md5-cache/sci-biology/vcftools-0.1.14 index 491407a18523..ff6536d596f1 100644 --- a/metadata/md5-cache/sci-biology/vcftools-0.1.14 +++ b/metadata/md5-cache/sci-biology/vcftools-0.1.14 @@ -9,5 +9,5 @@ LICENSE=LGPL-3 RDEPEND=sys-libs/zlib dev-lang/perl:= lapack? ( virtual/lapack ) SLOT=0 SRC_URI=https://github.com/vcftools/vcftools/releases/download/v0.1.14/vcftools-0.1.14.tar.gz -_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 2d5b3f4b315094768576b6799e4f926e flag-o-matic bc2e7662a4a9a8643be851982a837ddc gnuconfig 9f91b4b0c84e734a87492d4293f03de5 l10n 8cdd85e169b835d518bc2fd59f780d8e libtool f143db5a74ccd9ca28c1234deffede96 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib d410501a125f99ffb560b0c523cd3d1e perl-functions 6ec4c4d8fc8324200f1c14e8d158c59b preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 24921b57d6561d87cbef4916a296ada4 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 2d5b3f4b315094768576b6799e4f926e flag-o-matic bc2e7662a4a9a8643be851982a837ddc gnuconfig 9f91b4b0c84e734a87492d4293f03de5 l10n 8cdd85e169b835d518bc2fd59f780d8e libtool f143db5a74ccd9ca28c1234deffede96 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib d410501a125f99ffb560b0c523cd3d1e perl-functions f1ee42d38920b69fd6b6229cef80b7f4 preserve-libs ef207dc62baddfddfd39a164d9797648 toolchain-funcs 24921b57d6561d87cbef4916a296ada4 vcs-clean 2a0f74a496fa2b1552c4f3398258b7bf wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=82adffd84f2a93745e683b498b79fbe8 |