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authorV3n3RiX <venerix@koprulu.sector>2024-05-13 00:01:18 +0100
committerV3n3RiX <venerix@koprulu.sector>2024-05-13 00:01:18 +0100
commita25cc082a26782e5d39ded4559c91ff11bc3c299 (patch)
tree6cd0802dd248058d540f1f5f472c5df98216f154 /metadata/md5-cache/sci-biology
parentd72a987a342949e200b5e9decbd71f246da53788 (diff)
gentoo auto-resync : 13:05:2024 - 00:01:18
Diffstat (limited to 'metadata/md5-cache/sci-biology')
-rw-r--r--metadata/md5-cache/sci-biology/Manifest.gzbin22346 -> 22352 bytes
-rw-r--r--metadata/md5-cache/sci-biology/abyss-2.3.42
-rw-r--r--metadata/md5-cache/sci-biology/bamtools-2.5.22
-rw-r--r--metadata/md5-cache/sci-biology/bamtools-99992
-rw-r--r--metadata/md5-cache/sci-biology/biopython-1.81-r12
-rw-r--r--metadata/md5-cache/sci-biology/bwa-0.7.172
-rw-r--r--metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660-r12
-rw-r--r--metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660-r12
-rw-r--r--metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660-r12
-rw-r--r--metadata/md5-cache/sci-biology/embassy-domalign-0.1.660-r12
-rw-r--r--metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660-r12
-rw-r--r--metadata/md5-cache/sci-biology/embassy-emnu-1.05.660-r12
-rw-r--r--metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660-r12
-rw-r--r--metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660-r12
-rw-r--r--metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660-r12
-rw-r--r--metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660-r12
-rw-r--r--metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660-r12
-rw-r--r--metadata/md5-cache/sci-biology/embassy-signature-0.1.660-r12
-rw-r--r--metadata/md5-cache/sci-biology/embassy-structure-0.1.660-r12
-rw-r--r--metadata/md5-cache/sci-biology/embassy-topo-2.0.660-r12
-rw-r--r--metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660-r12
-rw-r--r--metadata/md5-cache/sci-biology/emboss-6.6.0-r32
-rw-r--r--metadata/md5-cache/sci-biology/exonerate-2.2.0-r32
-rw-r--r--metadata/md5-cache/sci-biology/fasta-36.3.8h-r12
-rw-r--r--metadata/md5-cache/sci-biology/fasttree-2.1.112
-rw-r--r--metadata/md5-cache/sci-biology/hmmer-2.3.2-r62
-rw-r--r--metadata/md5-cache/sci-biology/kallisto-0.46.2-r12
-rw-r--r--metadata/md5-cache/sci-biology/mafft-7.4902
-rw-r--r--metadata/md5-cache/sci-biology/mosaik-2.2.302
-rw-r--r--metadata/md5-cache/sci-biology/mothur-1.27.0-r12
-rw-r--r--metadata/md5-cache/sci-biology/mothur-1.48.02
-rw-r--r--metadata/md5-cache/sci-biology/mummer-3.23-r12
-rw-r--r--metadata/md5-cache/sci-biology/muscle-3.8.312
-rw-r--r--metadata/md5-cache/sci-biology/newick-utils-1.6-r22
-rw-r--r--metadata/md5-cache/sci-biology/phylip-3.6982
-rw-r--r--metadata/md5-cache/sci-biology/pysam-0.21.02
-rw-r--r--metadata/md5-cache/sci-biology/pysam-99992
-rw-r--r--metadata/md5-cache/sci-biology/raxml-7.2.62
-rw-r--r--metadata/md5-cache/sci-biology/seqan-3.1.02
-rw-r--r--metadata/md5-cache/sci-biology/t-coffee-11.00-r32
-rw-r--r--metadata/md5-cache/sci-biology/treeviewx-0.5.1-r32
-rw-r--r--metadata/md5-cache/sci-biology/treeviewx-0.5.1.20100823_p42
-rw-r--r--metadata/md5-cache/sci-biology/trnascan-se-1.31-r32
-rw-r--r--metadata/md5-cache/sci-biology/uchime-4.2.40-r12
-rw-r--r--metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r12
-rw-r--r--metadata/md5-cache/sci-biology/vcftools-0.1.162
-rw-r--r--metadata/md5-cache/sci-biology/velvet-1.2.102
47 files changed, 46 insertions, 46 deletions
diff --git a/metadata/md5-cache/sci-biology/Manifest.gz b/metadata/md5-cache/sci-biology/Manifest.gz
index b7c4f342b6d4..941de6e9b66f 100644
--- a/metadata/md5-cache/sci-biology/Manifest.gz
+++ b/metadata/md5-cache/sci-biology/Manifest.gz
Binary files differ
diff --git a/metadata/md5-cache/sci-biology/abyss-2.3.4 b/metadata/md5-cache/sci-biology/abyss-2.3.4
index 898e7b325418..e43fd83bcb57 100644
--- a/metadata/md5-cache/sci-biology/abyss-2.3.4
+++ b/metadata/md5-cache/sci-biology/abyss-2.3.4
@@ -11,5 +11,5 @@ LICENSE=GPL-3
RDEPEND=dev-cpp/sparsehash dev-libs/boost:= misc-haskell? ( dev-libs/gmp:0= dev-libs/libffi:0= ) sys-cluster/openmpi dev-db/sqlite:3
SLOT=0
SRC_URI=https://github.com/bcgsc/abyss/archive/2.3.4.tar.gz -> abyss-2.3.4.tar.gz
-_eclasses_=autotools dc70c1dc473b68317fc4a86f5fbfc57d flag-o-matic 288c54efeb5e2aa70775e39032695ad4 gnuconfig a397adda6984a4c423e28ac274c1ba98 libtool 5f49a16f67f81bdf873e3d1f10b10001 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084
+_eclasses_=autotools dc70c1dc473b68317fc4a86f5fbfc57d flag-o-matic d309b9713dfc18e754cba88d3ba69653 gnuconfig a397adda6984a4c423e28ac274c1ba98 libtool 5f49a16f67f81bdf873e3d1f10b10001 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084
_md5_=498079fc466ad15118faea6d1635cce8
diff --git a/metadata/md5-cache/sci-biology/bamtools-2.5.2 b/metadata/md5-cache/sci-biology/bamtools-2.5.2
index 5b3ae6f60764..fe8f022502a3 100644
--- a/metadata/md5-cache/sci-biology/bamtools-2.5.2
+++ b/metadata/md5-cache/sci-biology/bamtools-2.5.2
@@ -10,5 +10,5 @@ LICENSE=MIT
RDEPEND=>=dev-libs/jsoncpp-1.8.0:= sys-libs/zlib:=
SLOT=0/2.5.2
SRC_URI=https://github.com/pezmaster31/bamtools/archive/v2.5.2.tar.gz -> bamtools-2.5.2.tar.gz
-_eclasses_=cmake c7c9a62d6232cac66d4ea32d575c3e7c flag-o-matic 288c54efeb5e2aa70775e39032695ad4 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing 30ead54fa2e2b5f9cd4e612ffc34d0fe ninja-utils 2df4e452cea39a9ec8fb543ce059f8d6 toolchain-funcs e56c7649b804f051623c8bc1a1c44084 xdg-utils baea6080dd821f5562d715887954c9d3
+_eclasses_=cmake c7c9a62d6232cac66d4ea32d575c3e7c flag-o-matic d309b9713dfc18e754cba88d3ba69653 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing 30ead54fa2e2b5f9cd4e612ffc34d0fe ninja-utils 2df4e452cea39a9ec8fb543ce059f8d6 toolchain-funcs e56c7649b804f051623c8bc1a1c44084 xdg-utils baea6080dd821f5562d715887954c9d3
_md5_=efdfbdbf4181a018ee9965d5c16be71f
diff --git a/metadata/md5-cache/sci-biology/bamtools-9999 b/metadata/md5-cache/sci-biology/bamtools-9999
index c4889e6fb5c4..c18cdd11ac0d 100644
--- a/metadata/md5-cache/sci-biology/bamtools-9999
+++ b/metadata/md5-cache/sci-biology/bamtools-9999
@@ -9,5 +9,5 @@ LICENSE=MIT
PROPERTIES=live
RDEPEND=>=dev-libs/jsoncpp-1.8.0:= sys-libs/zlib:=
SLOT=0/9999
-_eclasses_=cmake c7c9a62d6232cac66d4ea32d575c3e7c flag-o-matic 288c54efeb5e2aa70775e39032695ad4 git-r3 fbb2889c81f3a05910c1524db69425c1 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing 30ead54fa2e2b5f9cd4e612ffc34d0fe ninja-utils 2df4e452cea39a9ec8fb543ce059f8d6 toolchain-funcs e56c7649b804f051623c8bc1a1c44084 xdg-utils baea6080dd821f5562d715887954c9d3
+_eclasses_=cmake c7c9a62d6232cac66d4ea32d575c3e7c flag-o-matic d309b9713dfc18e754cba88d3ba69653 git-r3 fbb2889c81f3a05910c1524db69425c1 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing 30ead54fa2e2b5f9cd4e612ffc34d0fe ninja-utils 2df4e452cea39a9ec8fb543ce059f8d6 toolchain-funcs e56c7649b804f051623c8bc1a1c44084 xdg-utils baea6080dd821f5562d715887954c9d3
_md5_=a2299dc6ca850c1c25582656d7586681
diff --git a/metadata/md5-cache/sci-biology/biopython-1.81-r1 b/metadata/md5-cache/sci-biology/biopython-1.81-r1
index 9272bf32956f..3709d33133f0 100644
--- a/metadata/md5-cache/sci-biology/biopython-1.81-r1
+++ b/metadata/md5-cache/sci-biology/biopython-1.81-r1
@@ -12,5 +12,5 @@ RDEPEND=dev-python/matplotlib[python_targets_python3_10(-)?,python_targets_pytho
REQUIRED_USE=|| ( python_targets_python3_10 python_targets_python3_11 )
SLOT=0
SRC_URI=https://files.pythonhosted.org/packages/source/b/biopython/biopython-1.81.tar.gz
-_eclasses_=distutils-r1 a9e13d91cb9541a054827cb1d957a660 flag-o-matic 288c54efeb5e2aa70775e39032695ad4 multibuild d67e78a235f541871c7dfe4cf7931489 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing 30ead54fa2e2b5f9cd4e612ffc34d0fe ninja-utils 2df4e452cea39a9ec8fb543ce059f8d6 optfeature 222cb475c5a4f7ae7cfb0bf510a6fe54 out-of-source-utils 1a9007554652a6e627edbccb3c25a439 pypi 2eecb475512bc76e5ea9192a681b9e6b python-r1 8a28fa6d3e3bc96ff8a7eff2badbe71f python-utils-r1 e527bb25fc6ab8bb127b889b8f62500a toolchain-funcs e56c7649b804f051623c8bc1a1c44084
+_eclasses_=distutils-r1 a9e13d91cb9541a054827cb1d957a660 flag-o-matic d309b9713dfc18e754cba88d3ba69653 multibuild d67e78a235f541871c7dfe4cf7931489 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing 30ead54fa2e2b5f9cd4e612ffc34d0fe ninja-utils 2df4e452cea39a9ec8fb543ce059f8d6 optfeature 222cb475c5a4f7ae7cfb0bf510a6fe54 out-of-source-utils 1a9007554652a6e627edbccb3c25a439 pypi 2eecb475512bc76e5ea9192a681b9e6b python-r1 8a28fa6d3e3bc96ff8a7eff2badbe71f python-utils-r1 e527bb25fc6ab8bb127b889b8f62500a toolchain-funcs e56c7649b804f051623c8bc1a1c44084
_md5_=552dcb4529d1b3f00ef66c658dfedda2
diff --git a/metadata/md5-cache/sci-biology/bwa-0.7.17 b/metadata/md5-cache/sci-biology/bwa-0.7.17
index 9794afde6425..3bd6a47e7c5e 100644
--- a/metadata/md5-cache/sci-biology/bwa-0.7.17
+++ b/metadata/md5-cache/sci-biology/bwa-0.7.17
@@ -9,5 +9,5 @@ LICENSE=GPL-3
RDEPEND=sys-libs/zlib dev-lang/perl
SLOT=0
SRC_URI=https://github.com/lh3/bwa/archive/v0.7.17.tar.gz -> bwa-0.7.17.tar.gz
-_eclasses_=flag-o-matic 288c54efeb5e2aa70775e39032695ad4 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084
+_eclasses_=flag-o-matic d309b9713dfc18e754cba88d3ba69653 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084
_md5_=ba2dadcc176ba326d1290485ff909d7f
diff --git a/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660-r1 b/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660-r1
index 3459cbb84a3c..b08be34eb4e6 100644
--- a/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660-r1
+++ b/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660-r1
@@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/CBSTOOLS-1.0.0.660.tar.gz -> embassy-cbstools-1.0.0.660.tar.gz
-_eclasses_=autotools dc70c1dc473b68317fc4a86f5fbfc57d emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic 288c54efeb5e2aa70775e39032695ad4 gnuconfig a397adda6984a4c423e28ac274c1ba98 libtool 5f49a16f67f81bdf873e3d1f10b10001 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084
+_eclasses_=autotools dc70c1dc473b68317fc4a86f5fbfc57d emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic d309b9713dfc18e754cba88d3ba69653 gnuconfig a397adda6984a4c423e28ac274c1ba98 libtool 5f49a16f67f81bdf873e3d1f10b10001 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084
_md5_=56469e1c3bb7c4baac8ad99638b59ff0
diff --git a/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660-r1 b/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660-r1
index ae69904a3989..f030eb5f0e68 100644
--- a/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660-r1
+++ b/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660-r1
@@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=sci-biology/clustal-omega dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/CLUSTALOMEGA-1.1.0.660.tar.gz -> embassy-clustalomega-1.1.0.660.tar.gz
-_eclasses_=autotools dc70c1dc473b68317fc4a86f5fbfc57d emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic 288c54efeb5e2aa70775e39032695ad4 gnuconfig a397adda6984a4c423e28ac274c1ba98 libtool 5f49a16f67f81bdf873e3d1f10b10001 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084
+_eclasses_=autotools dc70c1dc473b68317fc4a86f5fbfc57d emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic d309b9713dfc18e754cba88d3ba69653 gnuconfig a397adda6984a4c423e28ac274c1ba98 libtool 5f49a16f67f81bdf873e3d1f10b10001 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084
_md5_=864a13621791118f794da4601dcde749
diff --git a/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660-r1 b/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660-r1
index 9f211aa0a913..2fe45afdcb20 100644
--- a/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660-r1
+++ b/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660-r1
@@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMAINATRIX-0.1.660.tar.gz -> embassy-domainatrix-0.1.660.tar.gz
-_eclasses_=autotools dc70c1dc473b68317fc4a86f5fbfc57d emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic 288c54efeb5e2aa70775e39032695ad4 gnuconfig a397adda6984a4c423e28ac274c1ba98 libtool 5f49a16f67f81bdf873e3d1f10b10001 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084
+_eclasses_=autotools dc70c1dc473b68317fc4a86f5fbfc57d emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic d309b9713dfc18e754cba88d3ba69653 gnuconfig a397adda6984a4c423e28ac274c1ba98 libtool 5f49a16f67f81bdf873e3d1f10b10001 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084
_md5_=af29c98cab7134ba05c6d874e37d95dc
diff --git a/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660-r1 b/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660-r1
index af613116dbfb..1499b9f1f948 100644
--- a/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660-r1
+++ b/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660-r1
@@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMALIGN-0.1.660.tar.gz -> embassy-domalign-0.1.660.tar.gz
-_eclasses_=autotools dc70c1dc473b68317fc4a86f5fbfc57d emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic 288c54efeb5e2aa70775e39032695ad4 gnuconfig a397adda6984a4c423e28ac274c1ba98 libtool 5f49a16f67f81bdf873e3d1f10b10001 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084
+_eclasses_=autotools dc70c1dc473b68317fc4a86f5fbfc57d emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic d309b9713dfc18e754cba88d3ba69653 gnuconfig a397adda6984a4c423e28ac274c1ba98 libtool 5f49a16f67f81bdf873e3d1f10b10001 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084
_md5_=677a5e171c80e94969c1ab9c0b55e283
diff --git a/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660-r1 b/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660-r1
index 9da621a1e195..521a9e07b293 100644
--- a/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660-r1
+++ b/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660-r1
@@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMSEARCH-0.1.660.tar.gz -> embassy-domsearch-0.1.660.tar.gz
-_eclasses_=autotools dc70c1dc473b68317fc4a86f5fbfc57d emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic 288c54efeb5e2aa70775e39032695ad4 gnuconfig a397adda6984a4c423e28ac274c1ba98 libtool 5f49a16f67f81bdf873e3d1f10b10001 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084
+_eclasses_=autotools dc70c1dc473b68317fc4a86f5fbfc57d emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic d309b9713dfc18e754cba88d3ba69653 gnuconfig a397adda6984a4c423e28ac274c1ba98 libtool 5f49a16f67f81bdf873e3d1f10b10001 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084
_md5_=e0ca10c2776835b0cd20c1b0f0721a1a
diff --git a/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660-r1 b/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660-r1
index 796be0032bbb..01ffc5fa328d 100644
--- a/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660-r1
+++ b/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660-r1
@@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=sys-libs/ncurses:0= dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/EMNU-1.05.660.tar.gz -> embassy-emnu-1.05.660.tar.gz
-_eclasses_=autotools dc70c1dc473b68317fc4a86f5fbfc57d emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic 288c54efeb5e2aa70775e39032695ad4 gnuconfig a397adda6984a4c423e28ac274c1ba98 libtool 5f49a16f67f81bdf873e3d1f10b10001 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084
+_eclasses_=autotools dc70c1dc473b68317fc4a86f5fbfc57d emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic d309b9713dfc18e754cba88d3ba69653 gnuconfig a397adda6984a4c423e28ac274c1ba98 libtool 5f49a16f67f81bdf873e3d1f10b10001 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084
_md5_=a33d45b5be798e7ebfcef8c59a300c88
diff --git a/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660-r1 b/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660-r1
index 91ca34f7f02f..a95f67a130ef 100644
--- a/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660-r1
+++ b/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660-r1
@@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/ESIM4-1.0.0.660.tar.gz -> embassy-esim4-1.0.0.660.tar.gz
-_eclasses_=autotools dc70c1dc473b68317fc4a86f5fbfc57d emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic 288c54efeb5e2aa70775e39032695ad4 gnuconfig a397adda6984a4c423e28ac274c1ba98 libtool 5f49a16f67f81bdf873e3d1f10b10001 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084
+_eclasses_=autotools dc70c1dc473b68317fc4a86f5fbfc57d emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic d309b9713dfc18e754cba88d3ba69653 gnuconfig a397adda6984a4c423e28ac274c1ba98 libtool 5f49a16f67f81bdf873e3d1f10b10001 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084
_md5_=95026ca22c2bacedf52a70b4428e7753
diff --git a/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660-r1 b/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660-r1
index 9519ca868f98..59487c6b3c58 100644
--- a/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660-r1
+++ b/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660-r1
@@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=sci-biology/hmmer:2 dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/HMMER-2.3.2.660.tar.gz -> embassy-hmmer-2.3.2.660.tar.gz
-_eclasses_=autotools dc70c1dc473b68317fc4a86f5fbfc57d emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic 288c54efeb5e2aa70775e39032695ad4 gnuconfig a397adda6984a4c423e28ac274c1ba98 libtool 5f49a16f67f81bdf873e3d1f10b10001 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084
+_eclasses_=autotools dc70c1dc473b68317fc4a86f5fbfc57d emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic d309b9713dfc18e754cba88d3ba69653 gnuconfig a397adda6984a4c423e28ac274c1ba98 libtool 5f49a16f67f81bdf873e3d1f10b10001 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084
_md5_=fb64fb071ec661ab550e0b33bc78b536
diff --git a/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660-r1 b/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660-r1
index a6410d7750a7..d22eab4dd595 100644
--- a/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660-r1
+++ b/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660-r1
@@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/IPRSCAN-4.3.1.660.tar.gz -> embassy-iprscan-4.3.1.660.tar.gz
-_eclasses_=autotools dc70c1dc473b68317fc4a86f5fbfc57d emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic 288c54efeb5e2aa70775e39032695ad4 gnuconfig a397adda6984a4c423e28ac274c1ba98 libtool 5f49a16f67f81bdf873e3d1f10b10001 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084
+_eclasses_=autotools dc70c1dc473b68317fc4a86f5fbfc57d emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic d309b9713dfc18e754cba88d3ba69653 gnuconfig a397adda6984a4c423e28ac274c1ba98 libtool 5f49a16f67f81bdf873e3d1f10b10001 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084
_md5_=06b3cb4ecb53ada6b96c0f8fe91680e9
diff --git a/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660-r1 b/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660-r1
index 70826ecb40a8..584f557004b5 100644
--- a/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660-r1
+++ b/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660-r1
@@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=sys-libs/ncurses:= dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/MSE-3.0.0.660.tar.gz -> embassy-mse-3.0.0.660.tar.gz
-_eclasses_=autotools dc70c1dc473b68317fc4a86f5fbfc57d emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic 288c54efeb5e2aa70775e39032695ad4 gnuconfig a397adda6984a4c423e28ac274c1ba98 libtool 5f49a16f67f81bdf873e3d1f10b10001 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084
+_eclasses_=autotools dc70c1dc473b68317fc4a86f5fbfc57d emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic d309b9713dfc18e754cba88d3ba69653 gnuconfig a397adda6984a4c423e28ac274c1ba98 libtool 5f49a16f67f81bdf873e3d1f10b10001 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084
_md5_=b6d66fbfe89f6c64f635551357dc90f4
diff --git a/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660-r1 b/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660-r1
index 75037b8ba724..b6af18e05b2f 100644
--- a/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660-r1
+++ b/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660-r1
@@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 free-noncomm
RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/PHYLIPNEW-3.69.660.tar.gz -> embassy-phylipnew-3.69.660.tar.gz
-_eclasses_=autotools dc70c1dc473b68317fc4a86f5fbfc57d emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic 288c54efeb5e2aa70775e39032695ad4 gnuconfig a397adda6984a4c423e28ac274c1ba98 libtool 5f49a16f67f81bdf873e3d1f10b10001 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084
+_eclasses_=autotools dc70c1dc473b68317fc4a86f5fbfc57d emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic d309b9713dfc18e754cba88d3ba69653 gnuconfig a397adda6984a4c423e28ac274c1ba98 libtool 5f49a16f67f81bdf873e3d1f10b10001 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084
_md5_=93c762366f9cfe8fbfdffd0fdc0483d5
diff --git a/metadata/md5-cache/sci-biology/embassy-signature-0.1.660-r1 b/metadata/md5-cache/sci-biology/embassy-signature-0.1.660-r1
index 3061aa72f943..d083aae78492 100644
--- a/metadata/md5-cache/sci-biology/embassy-signature-0.1.660-r1
+++ b/metadata/md5-cache/sci-biology/embassy-signature-0.1.660-r1
@@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/SIGNATURE-0.1.660.tar.gz -> embassy-signature-0.1.660.tar.gz
-_eclasses_=autotools dc70c1dc473b68317fc4a86f5fbfc57d emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic 288c54efeb5e2aa70775e39032695ad4 gnuconfig a397adda6984a4c423e28ac274c1ba98 libtool 5f49a16f67f81bdf873e3d1f10b10001 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084
+_eclasses_=autotools dc70c1dc473b68317fc4a86f5fbfc57d emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic d309b9713dfc18e754cba88d3ba69653 gnuconfig a397adda6984a4c423e28ac274c1ba98 libtool 5f49a16f67f81bdf873e3d1f10b10001 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084
_md5_=193e23282bfd7f7751d7e37988a0ec44
diff --git a/metadata/md5-cache/sci-biology/embassy-structure-0.1.660-r1 b/metadata/md5-cache/sci-biology/embassy-structure-0.1.660-r1
index 61b6f5b4542e..f9a5ea3434c6 100644
--- a/metadata/md5-cache/sci-biology/embassy-structure-0.1.660-r1
+++ b/metadata/md5-cache/sci-biology/embassy-structure-0.1.660-r1
@@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/STRUCTURE-0.1.660.tar.gz -> embassy-structure-0.1.660.tar.gz
-_eclasses_=autotools dc70c1dc473b68317fc4a86f5fbfc57d emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic 288c54efeb5e2aa70775e39032695ad4 gnuconfig a397adda6984a4c423e28ac274c1ba98 libtool 5f49a16f67f81bdf873e3d1f10b10001 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084
+_eclasses_=autotools dc70c1dc473b68317fc4a86f5fbfc57d emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic d309b9713dfc18e754cba88d3ba69653 gnuconfig a397adda6984a4c423e28ac274c1ba98 libtool 5f49a16f67f81bdf873e3d1f10b10001 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084
_md5_=c54138383c80476f9d515e5e2a33acaf
diff --git a/metadata/md5-cache/sci-biology/embassy-topo-2.0.660-r1 b/metadata/md5-cache/sci-biology/embassy-topo-2.0.660-r1
index ec079daffff4..a1cfb1eea023 100644
--- a/metadata/md5-cache/sci-biology/embassy-topo-2.0.660-r1
+++ b/metadata/md5-cache/sci-biology/embassy-topo-2.0.660-r1
@@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/TOPO-2.0.660.tar.gz -> embassy-topo-2.0.660.tar.gz
-_eclasses_=autotools dc70c1dc473b68317fc4a86f5fbfc57d emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic 288c54efeb5e2aa70775e39032695ad4 gnuconfig a397adda6984a4c423e28ac274c1ba98 libtool 5f49a16f67f81bdf873e3d1f10b10001 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084
+_eclasses_=autotools dc70c1dc473b68317fc4a86f5fbfc57d emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic d309b9713dfc18e754cba88d3ba69653 gnuconfig a397adda6984a4c423e28ac274c1ba98 libtool 5f49a16f67f81bdf873e3d1f10b10001 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084
_md5_=30ddf1c7471e11d692477ffa5a3a9956
diff --git a/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660-r1 b/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660-r1
index 6cfb9ed1b6e4..4b510aeb9fa3 100644
--- a/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660-r1
+++ b/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660-r1
@@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2
RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/VIENNA-1.7.2.660.tar.gz -> embassy-vienna-1.7.2.660.tar.gz
-_eclasses_=autotools dc70c1dc473b68317fc4a86f5fbfc57d emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic 288c54efeb5e2aa70775e39032695ad4 gnuconfig a397adda6984a4c423e28ac274c1ba98 libtool 5f49a16f67f81bdf873e3d1f10b10001 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084
+_eclasses_=autotools dc70c1dc473b68317fc4a86f5fbfc57d emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic d309b9713dfc18e754cba88d3ba69653 gnuconfig a397adda6984a4c423e28ac274c1ba98 libtool 5f49a16f67f81bdf873e3d1f10b10001 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084
_md5_=ba0cdfe4fa4ef35b15cb45a53f81f3b7
diff --git a/metadata/md5-cache/sci-biology/emboss-6.6.0-r3 b/metadata/md5-cache/sci-biology/emboss-6.6.0-r3
index e6147efee5e7..3d2f8a654379 100644
--- a/metadata/md5-cache/sci-biology/emboss-6.6.0-r3
+++ b/metadata/md5-cache/sci-biology/emboss-6.6.0-r3
@@ -12,5 +12,5 @@ PDEPEND=!minimal? ( sci-biology/aaindex sci-biology/cutg sci-biology/primer3 sci
RDEPEND=!dev-build/cons !games-action/xbomber dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt )
SLOT=0
SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-6.6.0.tar.gz https://dev.gentoo.org/~soap/distfiles/emboss-6.6.0-patches-r1.tar.xz
-_eclasses_=autotools dc70c1dc473b68317fc4a86f5fbfc57d emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic 288c54efeb5e2aa70775e39032695ad4 gnuconfig a397adda6984a4c423e28ac274c1ba98 libtool 5f49a16f67f81bdf873e3d1f10b10001 multilib c19072c3cd7ac5cb21de013f7e9832e0 readme.gentoo-r1 204091a2cde6179cd9d3db26d09412d3 toolchain-funcs e56c7649b804f051623c8bc1a1c44084
+_eclasses_=autotools dc70c1dc473b68317fc4a86f5fbfc57d emboss-r3 ed4c0b270092039c992b771a26ca322a flag-o-matic d309b9713dfc18e754cba88d3ba69653 gnuconfig a397adda6984a4c423e28ac274c1ba98 libtool 5f49a16f67f81bdf873e3d1f10b10001 multilib c19072c3cd7ac5cb21de013f7e9832e0 readme.gentoo-r1 204091a2cde6179cd9d3db26d09412d3 toolchain-funcs e56c7649b804f051623c8bc1a1c44084
_md5_=70b903dc25a6c63638148281283a607c
diff --git a/metadata/md5-cache/sci-biology/exonerate-2.2.0-r3 b/metadata/md5-cache/sci-biology/exonerate-2.2.0-r3
index fee03a66fbeb..ff98d9e03603 100644
--- a/metadata/md5-cache/sci-biology/exonerate-2.2.0-r3
+++ b/metadata/md5-cache/sci-biology/exonerate-2.2.0-r3
@@ -13,5 +13,5 @@ REQUIRED_USE=test? ( utils )
RESTRICT=!test? ( test )
SLOT=0
SRC_URI=https://ftp.ebi.ac.uk/pub/software/vertebrategenomics/exonerate/exonerate-2.2.0.tar.gz
-_eclasses_=autotools dc70c1dc473b68317fc4a86f5fbfc57d flag-o-matic 288c54efeb5e2aa70775e39032695ad4 gnuconfig a397adda6984a4c423e28ac274c1ba98 libtool 5f49a16f67f81bdf873e3d1f10b10001 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084
+_eclasses_=autotools dc70c1dc473b68317fc4a86f5fbfc57d flag-o-matic d309b9713dfc18e754cba88d3ba69653 gnuconfig a397adda6984a4c423e28ac274c1ba98 libtool 5f49a16f67f81bdf873e3d1f10b10001 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084
_md5_=10bdf3d183405e86dbde847391344239
diff --git a/metadata/md5-cache/sci-biology/fasta-36.3.8h-r1 b/metadata/md5-cache/sci-biology/fasta-36.3.8h-r1
index 9deda43adcc1..9732745c8cfd 100644
--- a/metadata/md5-cache/sci-biology/fasta-36.3.8h-r1
+++ b/metadata/md5-cache/sci-biology/fasta-36.3.8h-r1
@@ -10,5 +10,5 @@ LICENSE=fasta
RESTRICT=!test? ( test )
SLOT=0
SRC_URI=https://github.com/wrpearson/fasta36/archive/refs/tags/v36.3.8h_04-May-2020.tar.gz -> fasta-36.3.8h.tar.gz
-_eclasses_=flag-o-matic 288c54efeb5e2aa70775e39032695ad4 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084
+_eclasses_=flag-o-matic d309b9713dfc18e754cba88d3ba69653 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084
_md5_=741f3be1a17b816aabab39443236f37b
diff --git a/metadata/md5-cache/sci-biology/fasttree-2.1.11 b/metadata/md5-cache/sci-biology/fasttree-2.1.11
index fc5a1f7bf2cd..0885d8a1a533 100644
--- a/metadata/md5-cache/sci-biology/fasttree-2.1.11
+++ b/metadata/md5-cache/sci-biology/fasttree-2.1.11
@@ -10,5 +10,5 @@ LICENSE=GPL-2
REQUIRED_USE=?? ( double-precision cpu_flags_x86_sse3 )
SLOT=0
SRC_URI=http://www.microbesonline.org/fasttree/FastTree-2.1.11.c http://www.microbesonline.org/fasttree/FastTreeUPGMA.c -> FastTreeUPGMA-2.1.11.c http://www.microbesonline.org/fasttree/MOTreeComparison.tar.gz -> MOTreeComparison-2.1.11.tar.gz
-_eclasses_=cmake c7c9a62d6232cac66d4ea32d575c3e7c flag-o-matic 288c54efeb5e2aa70775e39032695ad4 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing 30ead54fa2e2b5f9cd4e612ffc34d0fe ninja-utils 2df4e452cea39a9ec8fb543ce059f8d6 toolchain-funcs e56c7649b804f051623c8bc1a1c44084 xdg-utils baea6080dd821f5562d715887954c9d3
+_eclasses_=cmake c7c9a62d6232cac66d4ea32d575c3e7c flag-o-matic d309b9713dfc18e754cba88d3ba69653 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing 30ead54fa2e2b5f9cd4e612ffc34d0fe ninja-utils 2df4e452cea39a9ec8fb543ce059f8d6 toolchain-funcs e56c7649b804f051623c8bc1a1c44084 xdg-utils baea6080dd821f5562d715887954c9d3
_md5_=4a94b8db43f0aadb5ece67757ccbe635
diff --git a/metadata/md5-cache/sci-biology/hmmer-2.3.2-r6 b/metadata/md5-cache/sci-biology/hmmer-2.3.2-r6
index 374c73e9ca92..4a814dcf3ca3 100644
--- a/metadata/md5-cache/sci-biology/hmmer-2.3.2-r6
+++ b/metadata/md5-cache/sci-biology/hmmer-2.3.2-r6
@@ -10,5 +10,5 @@ LICENSE=GPL-2
RESTRICT=!test? ( test )
SLOT=2
SRC_URI=http://eddylab.org/software/hmmer/2.3.2/hmmer-2.3.2.tar.gz
-_eclasses_=flag-o-matic 288c54efeb5e2aa70775e39032695ad4 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084
+_eclasses_=flag-o-matic d309b9713dfc18e754cba88d3ba69653 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084
_md5_=1fd6f0b99211b2fc58ba46d98f53bf58
diff --git a/metadata/md5-cache/sci-biology/kallisto-0.46.2-r1 b/metadata/md5-cache/sci-biology/kallisto-0.46.2-r1
index 9e7641b8cbcc..6d4f75d8fb05 100644
--- a/metadata/md5-cache/sci-biology/kallisto-0.46.2-r1
+++ b/metadata/md5-cache/sci-biology/kallisto-0.46.2-r1
@@ -12,5 +12,5 @@ RDEPEND=sci-libs/htslib:= sys-libs/zlib:= hdf5? ( sci-libs/hdf5:= )
RESTRICT=!test? ( test )
SLOT=0
SRC_URI=https://github.com/pachterlab/kallisto/archive/v0.46.2.tar.gz -> kallisto-0.46.2.tar.gz
-_eclasses_=cmake c7c9a62d6232cac66d4ea32d575c3e7c flag-o-matic 288c54efeb5e2aa70775e39032695ad4 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing 30ead54fa2e2b5f9cd4e612ffc34d0fe ninja-utils 2df4e452cea39a9ec8fb543ce059f8d6 toolchain-funcs e56c7649b804f051623c8bc1a1c44084 xdg-utils baea6080dd821f5562d715887954c9d3
+_eclasses_=cmake c7c9a62d6232cac66d4ea32d575c3e7c flag-o-matic d309b9713dfc18e754cba88d3ba69653 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing 30ead54fa2e2b5f9cd4e612ffc34d0fe ninja-utils 2df4e452cea39a9ec8fb543ce059f8d6 toolchain-funcs e56c7649b804f051623c8bc1a1c44084 xdg-utils baea6080dd821f5562d715887954c9d3
_md5_=910bb7d511b17acfbd0b6cd49c0fc114
diff --git a/metadata/md5-cache/sci-biology/mafft-7.490 b/metadata/md5-cache/sci-biology/mafft-7.490
index b3557e5025a3..720b403d75f7 100644
--- a/metadata/md5-cache/sci-biology/mafft-7.490
+++ b/metadata/md5-cache/sci-biology/mafft-7.490
@@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux ~x64-macos
LICENSE=BSD
SLOT=0
SRC_URI=https://mafft.cbrc.jp/alignment/software/mafft-7.490-without-extensions-src.tgz
-_eclasses_=flag-o-matic 288c54efeb5e2aa70775e39032695ad4 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084
+_eclasses_=flag-o-matic d309b9713dfc18e754cba88d3ba69653 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084
_md5_=04971be2bc4044a9c136d12a7e51b23d
diff --git a/metadata/md5-cache/sci-biology/mosaik-2.2.30 b/metadata/md5-cache/sci-biology/mosaik-2.2.30
index 91590e05335a..bb4a05afbdf2 100644
--- a/metadata/md5-cache/sci-biology/mosaik-2.2.30
+++ b/metadata/md5-cache/sci-biology/mosaik-2.2.30
@@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86
LICENSE=GPL-2
SLOT=0
SRC_URI=https://github.com/wanpinglee/MOSAIK/archive/5c25216d3522d6a33e53875cd76a6d65001e4e67.tar.gz -> mosaik-2.2.30.tar.gz
-_eclasses_=flag-o-matic 288c54efeb5e2aa70775e39032695ad4 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084 vcs-snapshot eab6d8533446763c2e9777d8bbd1594e
+_eclasses_=flag-o-matic d309b9713dfc18e754cba88d3ba69653 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084 vcs-snapshot eab6d8533446763c2e9777d8bbd1594e
_md5_=b275a0e18dbe85d2a2e24cebc796c134
diff --git a/metadata/md5-cache/sci-biology/mothur-1.27.0-r1 b/metadata/md5-cache/sci-biology/mothur-1.27.0-r1
index 86c85bcca419..088bdf0669ff 100644
--- a/metadata/md5-cache/sci-biology/mothur-1.27.0-r1
+++ b/metadata/md5-cache/sci-biology/mothur-1.27.0-r1
@@ -11,5 +11,5 @@ LICENSE=GPL-3
RDEPEND=sci-biology/uchime mpi? ( virtual/mpi ) virtual/fortran
SLOT=0
SRC_URI=https://www.mothur.org/w/images/c/cb/Mothur.1.27.0.zip -> mothur-1.27.0.zip
-_eclasses_=flag-o-matic 288c54efeb5e2aa70775e39032695ad4 fortran-2 40c4450f1c4ecb2ee694d96e1958d4ea multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084
+_eclasses_=flag-o-matic d309b9713dfc18e754cba88d3ba69653 fortran-2 40c4450f1c4ecb2ee694d96e1958d4ea multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084
_md5_=4d1c6c16f8757994256f73d5be45cb8f
diff --git a/metadata/md5-cache/sci-biology/mothur-1.48.0 b/metadata/md5-cache/sci-biology/mothur-1.48.0
index 2b6e66c07c58..dc2ec5f731cf 100644
--- a/metadata/md5-cache/sci-biology/mothur-1.48.0
+++ b/metadata/md5-cache/sci-biology/mothur-1.48.0
@@ -10,5 +10,5 @@ LICENSE=GPL-3
RDEPEND=sci-biology/uchime boost? ( dev-libs/boost:=[zlib] ) gsl? ( sci-libs/gsl:= ) hdf5? ( sci-libs/hdf5:=[cxx] ) mpi? ( virtual/mpi )
SLOT=0
SRC_URI=https://github.com/mothur/mothur/archive/refs/tags/v1.48.0.tar.gz -> mothur-1.48.0.tar.gz
-_eclasses_=flag-o-matic 288c54efeb5e2aa70775e39032695ad4 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084
+_eclasses_=flag-o-matic d309b9713dfc18e754cba88d3ba69653 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084
_md5_=2af03a020fdefd5d2d9a08ecc098d287
diff --git a/metadata/md5-cache/sci-biology/mummer-3.23-r1 b/metadata/md5-cache/sci-biology/mummer-3.23-r1
index 64dd5f52d54a..f661c1fcf543 100644
--- a/metadata/md5-cache/sci-biology/mummer-3.23-r1
+++ b/metadata/md5-cache/sci-biology/mummer-3.23-r1
@@ -9,5 +9,5 @@ LICENSE=Artistic
RDEPEND=app-shells/tcsh dev-lang/perl
SLOT=0
SRC_URI=https://downloads.sourceforge.net/mummer/MUMmer3.23.tar.gz
-_eclasses_=flag-o-matic 288c54efeb5e2aa70775e39032695ad4 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084
+_eclasses_=flag-o-matic d309b9713dfc18e754cba88d3ba69653 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084
_md5_=6c017adea5c77f3b2646f4b5947bcd7a
diff --git a/metadata/md5-cache/sci-biology/muscle-3.8.31 b/metadata/md5-cache/sci-biology/muscle-3.8.31
index a0970805a045..52cda6293db7 100644
--- a/metadata/md5-cache/sci-biology/muscle-3.8.31
+++ b/metadata/md5-cache/sci-biology/muscle-3.8.31
@@ -8,5 +8,5 @@ LICENSE=public-domain
RDEPEND=!sci-libs/libmuscle
SLOT=0
SRC_URI=https://www.drive5.com/muscle/downloads3.8.31/muscle3.8.31_src.tar.gz
-_eclasses_=flag-o-matic 288c54efeb5e2aa70775e39032695ad4 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084
+_eclasses_=flag-o-matic d309b9713dfc18e754cba88d3ba69653 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084
_md5_=46bd2dd5a3f5b38a212ff48669d0939c
diff --git a/metadata/md5-cache/sci-biology/newick-utils-1.6-r2 b/metadata/md5-cache/sci-biology/newick-utils-1.6-r2
index 9ce3ea840c41..d5681db8b21a 100644
--- a/metadata/md5-cache/sci-biology/newick-utils-1.6-r2
+++ b/metadata/md5-cache/sci-biology/newick-utils-1.6-r2
@@ -11,5 +11,5 @@ LICENSE=BSD
RDEPEND=xml? ( dev-libs/libxml2 ) !dev-games/libnw
SLOT=0
SRC_URI=https://web.archive.org/web/20120126210029if_/http://cegg.unige.ch/pub/newick-utils-1.6.tar.gz
-_eclasses_=autotools dc70c1dc473b68317fc4a86f5fbfc57d flag-o-matic 288c54efeb5e2aa70775e39032695ad4 gnuconfig a397adda6984a4c423e28ac274c1ba98 libtool 5f49a16f67f81bdf873e3d1f10b10001 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084
+_eclasses_=autotools dc70c1dc473b68317fc4a86f5fbfc57d flag-o-matic d309b9713dfc18e754cba88d3ba69653 gnuconfig a397adda6984a4c423e28ac274c1ba98 libtool 5f49a16f67f81bdf873e3d1f10b10001 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084
_md5_=f8324170fb990264d927dcd509f5898e
diff --git a/metadata/md5-cache/sci-biology/phylip-3.698 b/metadata/md5-cache/sci-biology/phylip-3.698
index 4f7b716611ef..3e67d2725ab4 100644
--- a/metadata/md5-cache/sci-biology/phylip-3.698
+++ b/metadata/md5-cache/sci-biology/phylip-3.698
@@ -10,5 +10,5 @@ LICENSE=BSD-2
RDEPEND=x11-libs/libXaw !dev-lang/elixir
SLOT=0
SRC_URI=http://evolution.gs.washington.edu/phylip/download/phylip-3.698.zip
-_eclasses_=flag-o-matic 288c54efeb5e2aa70775e39032695ad4 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084
+_eclasses_=flag-o-matic d309b9713dfc18e754cba88d3ba69653 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084
_md5_=b3a777c086ea4a6cd489efcb5bde7b66
diff --git a/metadata/md5-cache/sci-biology/pysam-0.21.0 b/metadata/md5-cache/sci-biology/pysam-0.21.0
index 2c4a137de571..9b9cddfdf4d9 100644
--- a/metadata/md5-cache/sci-biology/pysam-0.21.0
+++ b/metadata/md5-cache/sci-biology/pysam-0.21.0
@@ -13,5 +13,5 @@ REQUIRED_USE=|| ( python_targets_python3_10 python_targets_python3_11 )
RESTRICT=!test? ( test )
SLOT=0
SRC_URI=https://github.com/pysam-developers/pysam/archive/v0.21.0.tar.gz -> pysam-0.21.0.gh.tar.gz
-_eclasses_=distutils-r1 a9e13d91cb9541a054827cb1d957a660 flag-o-matic 288c54efeb5e2aa70775e39032695ad4 multibuild d67e78a235f541871c7dfe4cf7931489 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing 30ead54fa2e2b5f9cd4e612ffc34d0fe ninja-utils 2df4e452cea39a9ec8fb543ce059f8d6 out-of-source-utils 1a9007554652a6e627edbccb3c25a439 python-r1 8a28fa6d3e3bc96ff8a7eff2badbe71f python-utils-r1 e527bb25fc6ab8bb127b889b8f62500a toolchain-funcs e56c7649b804f051623c8bc1a1c44084
+_eclasses_=distutils-r1 a9e13d91cb9541a054827cb1d957a660 flag-o-matic d309b9713dfc18e754cba88d3ba69653 multibuild d67e78a235f541871c7dfe4cf7931489 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing 30ead54fa2e2b5f9cd4e612ffc34d0fe ninja-utils 2df4e452cea39a9ec8fb543ce059f8d6 out-of-source-utils 1a9007554652a6e627edbccb3c25a439 python-r1 8a28fa6d3e3bc96ff8a7eff2badbe71f python-utils-r1 e527bb25fc6ab8bb127b889b8f62500a toolchain-funcs e56c7649b804f051623c8bc1a1c44084
_md5_=d2f337ee806641d85739cd55c8698806
diff --git a/metadata/md5-cache/sci-biology/pysam-9999 b/metadata/md5-cache/sci-biology/pysam-9999
index 5d996cdb2359..e805903876a8 100644
--- a/metadata/md5-cache/sci-biology/pysam-9999
+++ b/metadata/md5-cache/sci-biology/pysam-9999
@@ -12,5 +12,5 @@ RDEPEND=>=sci-libs/htslib-1.17 python_targets_python3_10? ( dev-lang/python:3.10
REQUIRED_USE=|| ( python_targets_python3_10 python_targets_python3_11 )
RESTRICT=!test? ( test )
SLOT=0
-_eclasses_=distutils-r1 a9e13d91cb9541a054827cb1d957a660 flag-o-matic 288c54efeb5e2aa70775e39032695ad4 git-r3 fbb2889c81f3a05910c1524db69425c1 multibuild d67e78a235f541871c7dfe4cf7931489 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing 30ead54fa2e2b5f9cd4e612ffc34d0fe ninja-utils 2df4e452cea39a9ec8fb543ce059f8d6 out-of-source-utils 1a9007554652a6e627edbccb3c25a439 python-r1 8a28fa6d3e3bc96ff8a7eff2badbe71f python-utils-r1 e527bb25fc6ab8bb127b889b8f62500a toolchain-funcs e56c7649b804f051623c8bc1a1c44084
+_eclasses_=distutils-r1 a9e13d91cb9541a054827cb1d957a660 flag-o-matic d309b9713dfc18e754cba88d3ba69653 git-r3 fbb2889c81f3a05910c1524db69425c1 multibuild d67e78a235f541871c7dfe4cf7931489 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing 30ead54fa2e2b5f9cd4e612ffc34d0fe ninja-utils 2df4e452cea39a9ec8fb543ce059f8d6 out-of-source-utils 1a9007554652a6e627edbccb3c25a439 python-r1 8a28fa6d3e3bc96ff8a7eff2badbe71f python-utils-r1 e527bb25fc6ab8bb127b889b8f62500a toolchain-funcs e56c7649b804f051623c8bc1a1c44084
_md5_=bcdb07ed2c7ed322810daba181d02da3
diff --git a/metadata/md5-cache/sci-biology/raxml-7.2.6 b/metadata/md5-cache/sci-biology/raxml-7.2.6
index 3627294877c5..3439f6b6df23 100644
--- a/metadata/md5-cache/sci-biology/raxml-7.2.6
+++ b/metadata/md5-cache/sci-biology/raxml-7.2.6
@@ -9,5 +9,5 @@ LICENSE=GPL-2
REQUIRED_USE=cpu_flags_x86_sse3
SLOT=0
SRC_URI=http://wwwkramer.in.tum.de/exelixis/software/RAxML-7.2.6.tar.bz2
-_eclasses_=flag-o-matic 288c54efeb5e2aa70775e39032695ad4 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084
+_eclasses_=flag-o-matic d309b9713dfc18e754cba88d3ba69653 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084
_md5_=14b77d8b019468c10a65f1358be0d8ae
diff --git a/metadata/md5-cache/sci-biology/seqan-3.1.0 b/metadata/md5-cache/sci-biology/seqan-3.1.0
index b437fe0ecc41..a446c63d0301 100644
--- a/metadata/md5-cache/sci-biology/seqan-3.1.0
+++ b/metadata/md5-cache/sci-biology/seqan-3.1.0
@@ -12,5 +12,5 @@ RDEPEND=app-arch/bzip2:= dev-cpp/range-v3 dev-libs/cereal sci-libs/lemon sys-lib
REQUIRED_USE=cpu_flags_x86_sse4_2
SLOT=0
SRC_URI=https://github.com/seqan/seqan3/releases/download/3.1.0/seqan3-3.1.0-Source.tar.xz
-_eclasses_=cmake c7c9a62d6232cac66d4ea32d575c3e7c flag-o-matic 288c54efeb5e2aa70775e39032695ad4 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing 30ead54fa2e2b5f9cd4e612ffc34d0fe ninja-utils 2df4e452cea39a9ec8fb543ce059f8d6 toolchain-funcs e56c7649b804f051623c8bc1a1c44084 xdg-utils baea6080dd821f5562d715887954c9d3
+_eclasses_=cmake c7c9a62d6232cac66d4ea32d575c3e7c flag-o-matic d309b9713dfc18e754cba88d3ba69653 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing 30ead54fa2e2b5f9cd4e612ffc34d0fe ninja-utils 2df4e452cea39a9ec8fb543ce059f8d6 toolchain-funcs e56c7649b804f051623c8bc1a1c44084 xdg-utils baea6080dd821f5562d715887954c9d3
_md5_=327a33751512d78b13d5acd641ba3385
diff --git a/metadata/md5-cache/sci-biology/t-coffee-11.00-r3 b/metadata/md5-cache/sci-biology/t-coffee-11.00-r3
index f7f2f45323ce..c4bc2d4c7359 100644
--- a/metadata/md5-cache/sci-biology/t-coffee-11.00-r3
+++ b/metadata/md5-cache/sci-biology/t-coffee-11.00-r3
@@ -8,5 +8,5 @@ LICENSE=GPL-2
RDEPEND=sci-biology/clustalw sci-chemistry/tm-align
SLOT=0
SRC_URI=http://www.tcoffee.org/Packages/Beta/Latest/T-COFFEE_distribution_Version_11.00.4466924.tar.gz
-_eclasses_=flag-o-matic 288c54efeb5e2aa70775e39032695ad4 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084
+_eclasses_=flag-o-matic d309b9713dfc18e754cba88d3ba69653 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084
_md5_=489f3794f3d0f3e0bf26ffb6c031578d
diff --git a/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3 b/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3
index e5faf8c75aa6..012dcef93062 100644
--- a/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3
+++ b/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3
@@ -10,5 +10,5 @@ LICENSE=GPL-2
RDEPEND=x11-libs/wxGTK:3.0[X]
SLOT=0
SRC_URI=http://darwin.zoology.gla.ac.uk/~rpage/treeviewx/download/0.5/tv-0.5.1.tar.gz
-_eclasses_=autotools dc70c1dc473b68317fc4a86f5fbfc57d flag-o-matic 288c54efeb5e2aa70775e39032695ad4 gnuconfig a397adda6984a4c423e28ac274c1ba98 libtool 5f49a16f67f81bdf873e3d1f10b10001 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084 wxwidgets 9a707a3f9f1ea7aa703b1e46552291e5
+_eclasses_=autotools dc70c1dc473b68317fc4a86f5fbfc57d flag-o-matic d309b9713dfc18e754cba88d3ba69653 gnuconfig a397adda6984a4c423e28ac274c1ba98 libtool 5f49a16f67f81bdf873e3d1f10b10001 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084 wxwidgets 9a707a3f9f1ea7aa703b1e46552291e5
_md5_=c7a6fb1f3ee6436d674328487c021a24
diff --git a/metadata/md5-cache/sci-biology/treeviewx-0.5.1.20100823_p4 b/metadata/md5-cache/sci-biology/treeviewx-0.5.1.20100823_p4
index 0f15e7917329..5b924bc6600e 100644
--- a/metadata/md5-cache/sci-biology/treeviewx-0.5.1.20100823_p4
+++ b/metadata/md5-cache/sci-biology/treeviewx-0.5.1.20100823_p4
@@ -11,5 +11,5 @@ LICENSE=GPL-2
RDEPEND=x11-libs/wxGTK:3.2-gtk3[X]
SLOT=0
SRC_URI=https://github.com/rdmpage/treeviewx/archive/7e4d0e96dfdde51a92a1634b41d7284142a19afa.tar.gz -> treeviewx-0.5.1.20100823_p4.tar.gz mirror://debian/pool/main/t/treeviewx/treeviewx_0.5.1+git20100823.7e4d0e9-4.debian.tar.xz https://dev.gentoo.org/~pacho/treeviewx/treeviewx_128.png
-_eclasses_=autotools dc70c1dc473b68317fc4a86f5fbfc57d desktop 021728fdc1b03b36357dbc89489e0f0d flag-o-matic 288c54efeb5e2aa70775e39032695ad4 gnuconfig a397adda6984a4c423e28ac274c1ba98 libtool 5f49a16f67f81bdf873e3d1f10b10001 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084 wxwidgets 9a707a3f9f1ea7aa703b1e46552291e5 xdg 4a14c5c24f121e7da66e5aab4a168c6e xdg-utils baea6080dd821f5562d715887954c9d3
+_eclasses_=autotools dc70c1dc473b68317fc4a86f5fbfc57d desktop 021728fdc1b03b36357dbc89489e0f0d flag-o-matic d309b9713dfc18e754cba88d3ba69653 gnuconfig a397adda6984a4c423e28ac274c1ba98 libtool 5f49a16f67f81bdf873e3d1f10b10001 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084 wxwidgets 9a707a3f9f1ea7aa703b1e46552291e5 xdg 4a14c5c24f121e7da66e5aab4a168c6e xdg-utils baea6080dd821f5562d715887954c9d3
_md5_=717085213272cc84290050e8716b9f37
diff --git a/metadata/md5-cache/sci-biology/trnascan-se-1.31-r3 b/metadata/md5-cache/sci-biology/trnascan-se-1.31-r3
index 3abc7c0a83a3..25264b75db2e 100644
--- a/metadata/md5-cache/sci-biology/trnascan-se-1.31-r3
+++ b/metadata/md5-cache/sci-biology/trnascan-se-1.31-r3
@@ -9,5 +9,5 @@ LICENSE=GPL-2
RDEPEND=dev-lang/perl:=
SLOT=0
SRC_URI=http://lowelab.ucsc.edu/software/tRNAscan-SE.tar.gz -> trnascan-se-1.31.tar.gz
-_eclasses_=flag-o-matic 288c54efeb5e2aa70775e39032695ad4 multilib c19072c3cd7ac5cb21de013f7e9832e0 perl-functions c3fca037246e877693badea0df3b0ef8 toolchain-funcs e56c7649b804f051623c8bc1a1c44084
+_eclasses_=flag-o-matic d309b9713dfc18e754cba88d3ba69653 multilib c19072c3cd7ac5cb21de013f7e9832e0 perl-functions c3fca037246e877693badea0df3b0ef8 toolchain-funcs e56c7649b804f051623c8bc1a1c44084
_md5_=52e449bd6a1f0b9bd42d7eaedfc1d9e6
diff --git a/metadata/md5-cache/sci-biology/uchime-4.2.40-r1 b/metadata/md5-cache/sci-biology/uchime-4.2.40-r1
index 62ae45fef003..a62e6c24e2a0 100644
--- a/metadata/md5-cache/sci-biology/uchime-4.2.40-r1
+++ b/metadata/md5-cache/sci-biology/uchime-4.2.40-r1
@@ -8,5 +8,5 @@ KEYWORDS=amd64 ~x86 ~amd64-linux ~x86-linux
LICENSE=public-domain
SLOT=0
SRC_URI=https://www.drive5.com/uchime/uchime4.2.40_src.tar.gz
-_eclasses_=cmake c7c9a62d6232cac66d4ea32d575c3e7c flag-o-matic 288c54efeb5e2aa70775e39032695ad4 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing 30ead54fa2e2b5f9cd4e612ffc34d0fe ninja-utils 2df4e452cea39a9ec8fb543ce059f8d6 toolchain-funcs e56c7649b804f051623c8bc1a1c44084 xdg-utils baea6080dd821f5562d715887954c9d3
+_eclasses_=cmake c7c9a62d6232cac66d4ea32d575c3e7c flag-o-matic d309b9713dfc18e754cba88d3ba69653 multilib c19072c3cd7ac5cb21de013f7e9832e0 multiprocessing 30ead54fa2e2b5f9cd4e612ffc34d0fe ninja-utils 2df4e452cea39a9ec8fb543ce059f8d6 toolchain-funcs e56c7649b804f051623c8bc1a1c44084 xdg-utils baea6080dd821f5562d715887954c9d3
_md5_=d6d5b7ba215fd8eaf51d3847f4051df6
diff --git a/metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r1 b/metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r1
index 5d2f4e553cf3..56b6da8f640d 100644
--- a/metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r1
+++ b/metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r1
@@ -11,5 +11,5 @@ RDEPEND=dev-libs/openssl:0= media-libs/libpng:0= !<sci-biology/ucsc-genome-brows
REQUIRED_USE=server? ( mysql )
SLOT=0
SRC_URI=http://hgdownload.cse.ucsc.edu/admin/jksrc.v260.zip
-_eclasses_=eqawarn c9847c43b3253a276ae2eabddedab3d7 flag-o-matic 288c54efeb5e2aa70775e39032695ad4 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084 webapp de2d3d345b44597c10d7104a7bcdf7b2
+_eclasses_=eqawarn c9847c43b3253a276ae2eabddedab3d7 flag-o-matic d309b9713dfc18e754cba88d3ba69653 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084 webapp de2d3d345b44597c10d7104a7bcdf7b2
_md5_=35cb93e40ad2d78c190e860dd3944557
diff --git a/metadata/md5-cache/sci-biology/vcftools-0.1.16 b/metadata/md5-cache/sci-biology/vcftools-0.1.16
index 58b215cbdc2f..3c757d148cd1 100644
--- a/metadata/md5-cache/sci-biology/vcftools-0.1.16
+++ b/metadata/md5-cache/sci-biology/vcftools-0.1.16
@@ -11,5 +11,5 @@ LICENSE=LGPL-3
RDEPEND=sys-libs/zlib dev-lang/perl:= lapack? ( virtual/lapack )
SLOT=0
SRC_URI=https://github.com/vcftools/vcftools/releases/download/v0.1.16/vcftools-0.1.16.tar.gz
-_eclasses_=autotools dc70c1dc473b68317fc4a86f5fbfc57d flag-o-matic 288c54efeb5e2aa70775e39032695ad4 gnuconfig a397adda6984a4c423e28ac274c1ba98 libtool 5f49a16f67f81bdf873e3d1f10b10001 multilib c19072c3cd7ac5cb21de013f7e9832e0 perl-functions c3fca037246e877693badea0df3b0ef8 toolchain-funcs e56c7649b804f051623c8bc1a1c44084
+_eclasses_=autotools dc70c1dc473b68317fc4a86f5fbfc57d flag-o-matic d309b9713dfc18e754cba88d3ba69653 gnuconfig a397adda6984a4c423e28ac274c1ba98 libtool 5f49a16f67f81bdf873e3d1f10b10001 multilib c19072c3cd7ac5cb21de013f7e9832e0 perl-functions c3fca037246e877693badea0df3b0ef8 toolchain-funcs e56c7649b804f051623c8bc1a1c44084
_md5_=faeb202e0aded0cb660ea87d6d7be81b
diff --git a/metadata/md5-cache/sci-biology/velvet-1.2.10 b/metadata/md5-cache/sci-biology/velvet-1.2.10
index 5e11bace78d0..0120fe8b3e78 100644
--- a/metadata/md5-cache/sci-biology/velvet-1.2.10
+++ b/metadata/md5-cache/sci-biology/velvet-1.2.10
@@ -9,5 +9,5 @@ KEYWORDS=~amd64 ~x86
LICENSE=GPL-2
SLOT=0
SRC_URI=https://www.ebi.ac.uk/~zerbino/velvet/velvet_1.2.10.tgz
-_eclasses_=flag-o-matic 288c54efeb5e2aa70775e39032695ad4 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084
+_eclasses_=flag-o-matic d309b9713dfc18e754cba88d3ba69653 multilib c19072c3cd7ac5cb21de013f7e9832e0 toolchain-funcs e56c7649b804f051623c8bc1a1c44084
_md5_=b0793fd684981bd3e2b3f0d2f50c4d91