diff options
| author | V3n3RiX <venerix@koprulu.sector> | 2023-02-19 20:16:04 +0000 |
|---|---|---|
| committer | V3n3RiX <venerix@koprulu.sector> | 2023-02-19 20:16:04 +0000 |
| commit | d4725f7e03f4d243d29d408f4b9de39459e00d4c (patch) | |
| tree | 5b5a3f8042f807f8277163cdc362e03f3333fec7 /sci-biology/bcftools | |
| parent | 80c51284f0017d5765c7ae39207be9c58f4bfa17 (diff) | |
gentoo auto-resync : 19:02:2023 - 20:16:03
Diffstat (limited to 'sci-biology/bcftools')
| -rw-r--r-- | sci-biology/bcftools/Manifest | 2 | ||||
| -rw-r--r-- | sci-biology/bcftools/bcftools-1.15.1.ebuild | 42 |
2 files changed, 0 insertions, 44 deletions
diff --git a/sci-biology/bcftools/Manifest b/sci-biology/bcftools/Manifest index 10584e16c542..f4aeb61e0c0a 100644 --- a/sci-biology/bcftools/Manifest +++ b/sci-biology/bcftools/Manifest @@ -1,5 +1,3 @@ -DIST bcftools-1.15.1.tar.bz2 6917252 BLAKE2B d2389df8d2a1bbc48fcaccad47d77ff99d700e82e04330189e7d93acdac97a13506c2b799fbba31bdc0988977c7df7c699e7b156f3530dd35e5f052c6f977731 SHA512 60fedacc41051675d372e68146ac8fa0dc019a7fb694fda487d89e62f34edaf5ac11cca38779e9bcfcf8b3148802fadabed12f7e46ad534ad5087b8d6383f97b DIST bcftools-1.16.tar.bz2 7325862 BLAKE2B 0e1240448d4efb352d3d0cd83decd286f7544fff3676f0a5cca51dec9c445c47c37ac24a3317aa7b41182c576e7e57dba460fc98aca069dc2f8fe0625c0b0f06 SHA512 998d5ac941f73798c35dd1db7ac7aba9067f275bd3055728aabfd8edd9f40484130df1fb57621d1a762a57b28ffcac358570915c341d420ae6f12bd17f7651a3 -EBUILD bcftools-1.15.1.ebuild 891 BLAKE2B f53122b55cb0ae73618c607332f51d1881e592b361bf325e762a4c1f6a19da1ba39df44068e87b410c67caa606ffa455dd678d7a7daaa0b266def26584785bc4 SHA512 065a1a9f36960e0c8f1600990bb4d6fd31305604c1cbf561110bc6943e810abf47632d147072cda42c09f3510a709455862212fd07d531e18c1109008370d5b4 EBUILD bcftools-1.16.ebuild 900 BLAKE2B 98f04325ca039867010c25c5ebff64725de637960c1980cce0faee7b8514d187ca3a309a3db79bb809ebcb9938869884c89b54f232fcf826aa34b38c5dde9c6e SHA512 82bb9a379019f0d9f9c601fad06d4041e5b890cb21618cc37f37f5f6ce0c3d5d9cd1d6223a19b8a53303e8ab3ce4046a21fbd3b7b18fd45243d57226d040ffc4 MISC metadata.xml 344 BLAKE2B 37f8e82e8a5a9ad572580a7e5ae6daa6911d672f17b8526f81b236cbc2e50a32c4cd2566aaed9f5feee016d7e2de7db2a40b60616e86c3e8cae307d60cebc70e SHA512 0160c9606089d610613d71dc0aa9c9c5e5266483fdc9c407b6e0ed911eac8f8b32ffaf5a49bbb427393c8240e9868df51f0fc68b2f45467f65d9b3d54b0ddde1 diff --git a/sci-biology/bcftools/bcftools-1.15.1.ebuild b/sci-biology/bcftools/bcftools-1.15.1.ebuild deleted file mode 100644 index 9032b97e11d0..000000000000 --- a/sci-biology/bcftools/bcftools-1.15.1.ebuild +++ /dev/null @@ -1,42 +0,0 @@ -# Copyright 1999-2023 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=8 - -PYTHON_COMPAT=( python3_{9..10} ) - -inherit python-single-r1 - -DESCRIPTION="Utilities for variant calling and manipulating VCF and BCF files" -HOMEPAGE="http://www.htslib.org" -SRC_URI="https://github.com/samtools/${PN}/releases/download/${PV}/${P}.tar.bz2" - -LICENSE="MIT" -SLOT="0" -KEYWORDS="~amd64 ~x86" -REQUIRED_USE="${PYTHON_REQUIRED_USE}" - -RDEPEND=" - dev-lang/perl - $(python_gen_cond_dep 'dev-python/matplotlib[${PYTHON_USEDEP}]') - =sci-libs/htslib-${PV}*:= - sys-libs/zlib - ${PYTHON_DEPS}" -DEPEND="${RDEPEND}" -BDEPEND="${PYTHON_DEPS}" - -src_prepare() { - default - - python_fix_shebang misc/{gff2gff,guess-ploidy,plot-roh}.py - - # remove bundled htslib - rm -r htslib-* || die -} - -src_configure() { - econf \ - --disable-bcftools-plugins \ - --disable-libgsl \ - --with-htslib=system -} |