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authorV3n3RiX <venerix@redcorelinux.org>2017-10-09 18:53:29 +0100
committerV3n3RiX <venerix@redcorelinux.org>2017-10-09 18:53:29 +0100
commit4f2d7949f03e1c198bc888f2d05f421d35c57e21 (patch)
treeba5f07bf3f9d22d82e54a462313f5d244036c768 /sci-biology/poa/files
reinit the tree, so we can have metadata
Diffstat (limited to 'sci-biology/poa/files')
-rw-r--r--sci-biology/poa/files/2-respect-flags.patch26
1 files changed, 26 insertions, 0 deletions
diff --git a/sci-biology/poa/files/2-respect-flags.patch b/sci-biology/poa/files/2-respect-flags.patch
new file mode 100644
index 000000000000..bdd638cf64b7
--- /dev/null
+++ b/sci-biology/poa/files/2-respect-flags.patch
@@ -0,0 +1,26 @@
+diff --git a/Makefile b/Makefile
+index a65bed0..713a7ab 100644
+--- a/Makefile
++++ b/Makefile
+@@ -26,9 +26,10 @@ LIBOBJECTS= \
+ stringptr.o
+
+
+-CC = gcc
++CC ?= gcc
+ #CFLAGS= -g -ansi-strict -W -Wall -DUSE_WEIGHTED_LINKS -DUSE_PROJECT_HEADER -I.
+-CFLAGS= -g -DUSE_WEIGHTED_LINKS -DUSE_PROJECT_HEADER -I.
++OPT_CFLAGS = -g
++CFLAGS= $(OPT_CFLAGS) -DUSE_WEIGHTED_LINKS -DUSE_PROJECT_HEADER -I.
+ # -I$(HOME)/lib/include
+ # -DREPORT_MAX_ALLOC
+
+@@ -44,7 +45,7 @@ liblpo.a: $(LIBOBJECTS)
+
+ # NB: LIBRARY MUST FOLLOW OBJECTS OR LINK FAILS WITH UNRESOLVED REFERENCES!!
+ poa: $(OBJECTS) liblpo.a
+- $(CC) -o $@ $(OBJECTS) -lm liblpo.a
++ $(CC) $(LDFLAGS) -o $@ $(OBJECTS) -lm liblpo.a
+
+ what:
+ @echo poa: partial-order based sequence alignment program