diff options
| author | V3n3RiX <venerix@redcorelinux.org> | 2017-10-09 18:53:29 +0100 |
|---|---|---|
| committer | V3n3RiX <venerix@redcorelinux.org> | 2017-10-09 18:53:29 +0100 |
| commit | 4f2d7949f03e1c198bc888f2d05f421d35c57e21 (patch) | |
| tree | ba5f07bf3f9d22d82e54a462313f5d244036c768 /sci-biology/rmblast/rmblast-1.2-r1.ebuild | |
reinit the tree, so we can have metadata
Diffstat (limited to 'sci-biology/rmblast/rmblast-1.2-r1.ebuild')
| -rw-r--r-- | sci-biology/rmblast/rmblast-1.2-r1.ebuild | 46 |
1 files changed, 46 insertions, 0 deletions
diff --git a/sci-biology/rmblast/rmblast-1.2-r1.ebuild b/sci-biology/rmblast/rmblast-1.2-r1.ebuild new file mode 100644 index 000000000000..db7c5a246910 --- /dev/null +++ b/sci-biology/rmblast/rmblast-1.2-r1.ebuild @@ -0,0 +1,46 @@ +# Copyright 1999-2015 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 + +EAPI=5 + +inherit eutils flag-o-matic toolchain-funcs + +MY_NCBI_BLAST_V=2.2.23+ + +DESCRIPTION="RepeatMasker compatible version of NCBI BLAST+" +HOMEPAGE="http://www.repeatmasker.org/RMBlast.html" +SRC_URI="http://www.repeatmasker.org/rmblast-${PV}-ncbi-blast-${MY_NCBI_BLAST_V}-src.tar.gz" + +LICENSE="OSL-2.1" +SLOT="0" +IUSE="" +KEYWORDS="~amd64 ~x86" + +RDEPEND="dev-libs/boost" +DEPEND="${RDEPEND} + app-arch/cpio" + +S="${WORKDIR}/${P}-ncbi-blast-${MY_NCBI_BLAST_V}-src/c++" + +src_prepare() { + filter-ldflags -Wl,--as-needed + sed \ + -e 's/-print-file-name=libstdc++.a//' \ + -e '/sed/ s/\([gO]\[0-9\]\)\*/\1\\+/' \ + -e "/DEF_FAST_FLAGS=/s:=\".*\":=\"${CFLAGS}\":g" \ + -e 's/2.95\* | 2.96\* | 3\.\* | 4\.\* )/2.95\* | 2.96\* | \[3-9\]\.\* )/g' \ + -i src/build-system/configure || die + epatch "${FILESDIR}"/${P}-gcc47.patch +} + +src_configure() { + tc-export CXX CC + + "${S}"/configure --without-debug \ + --with-mt \ + --without-static \ + --with-dll \ + --prefix="${ED}"/opt/${PN} \ + --with-boost="${EPREFIX}/usr/include/boost" \ + || die +} |