gentoo resync : 15.12.2019

5 files changed, 0 insertions, 208 deletions

diff --git a/sci-chemistry/molden/Manifest b/sci-chemistry/molden/Manifest
index 1c85a8486821..28f2def46ff2 100644
--- a/sci-chemistry/molden/Manifest
+++ b/sci-chemistry/molden/Manifest
@@ -1,14 +1,8 @@
 AUX molden-4.7-implicit-dec.patch 225 BLAKE2B 5d3a911b27bac3b1041d6b85599468ce6f0b0b8a52a118bf1d8d4ab5e22b7c0bcda0dd9f14241fd8e9bc0b79c966a07da1d40c38839086496f11edf1ff733516 SHA512 9a76dfdd434849532a8625459663ca81d8a948b20f7ea8296ae8d25a51f6c28b3cab2691be0f7683ff5d5b7ed8d84211ac26a5bb22c27891863a1c04299d8fea
-AUX molden-4.8-ambfor.patch 480 BLAKE2B 59db88a3a997ebb0f6d99b30cd46ddbf3d4cfac43adf2b47bc189db44e5b6077ee5e296abd792f8e131f1c15c5586020252b0acc0ed2a590670abf047e339c1c SHA512 9fe52f994e621e4ce578a8cdfa9074ceda522c2426c4b15c4d1de38832eef936de54bd07021489e0e12f420b25179b7a3cb615512d77d4457d9e7c9adae0f475
 AUX molden-4.8-ldflags.patch 866 BLAKE2B ba4e859d0706e17e926b3f55ed03bac5d50dcb0c5f3ddd8f5dd829cd75880bfe64f6f509d3d76acbbe0613c17348df70527be34abb084f19c46ce6f0e11f5964 SHA512 427ec1da9e71b2097164f8fb7448713961f7fdb63b8a51dee23490d6d305129dd12a9e782033588304406dd35aa18ceb7040c32fa09ea38b339f9dc47e0a24a9
-AUX molden-4.8-overflow.patch 714 BLAKE2B fe94c6192632388f9e88f68abf2c9467e11fec068d13f510217870a897f4ac685fc5651a8a60db2f1b72d967275b34f84aeb9d598cad7d8323ace3d66ec44b36 SHA512 ecc4f4501166a4ed4a1c451901d3aed49e3ad7fd3833cb4419a62b1864e689399ca68562fbc82784813881a003a405d4eea5d0e351a9181cbb164beb702d3765
 AUX molden-5.0-ambfor.patch 523 BLAKE2B 1443a26ff5fbaab3092a6df6a5ab0d514547d59788030ea1c761b8867cf042ff53f6382b85c7aa5383a85504c99e625e9e9c13cd96e1c52a2e05347286be474a SHA512 f531d3bd50374bf658e710f2e4b649559503b378ab663f03cd9259b9105b6c25eab61318bb3d02814425ecb596802569aa3281741d611d4e1c8fc4da771fd481
 AUX molden-5.0-overflow.patch 341 BLAKE2B c7285c87c0741ecf6bce3bad89883ed6e7720cb72a479c9bea7ad8a1dabcc1ae8894f6811e2d537555a00cb9138a7b579dee631221efb3a721b77b446abcb82d SHA512 342b7531179b8a3c3aedff085022d972bd795d2c56ebf4b49fce5ff60e6cc9ea48ed18258af53042ad72aae400f694aec9692bc0b1abfa960bc100ee02f57981
 AUX molden-5.5-gcc8.patch 328 BLAKE2B e098e680a5b75ff09fbaecf44609055584b0f1c49edc0ea16b81dbff68b06883dc6317340b3dc6b26836958d1f561b3aed383964f7c65126079f74b3023f96dd SHA512 cc1a8c08b9081ff138aedda11887295f0eb31b97174ce45bffae8e563318388035948775f03d39823280103ea522a20939b6294e3d3721e599e6790e4a5695e2
-DIST molden4.8.tar.gz 2969701 BLAKE2B 943bfd7bd8dde2da8e171f4a0f5e570ec1a064ef92e6ae4f6cbc48289e42c4660e021965670c132328e575d2ca388fccf7f8ae77d4f7342b55fe5522f2f63c6e SHA512 11f2406e54a077d044369b5eee4a8a1c1b10f052188d33d4162af0151a1e76a1d5274d8788bbc3610905ff271b0bd2100990b77540a0290ad608bd5c29b839e3
-DIST molden5.0.tar.gz 3063244 BLAKE2B 857f3276e45d05f92f291b0189cdcb7aeacd9ede0eeaf1ebe6b6942d397bbdd83812b4a5c8163be75a5a3c7bd0b29c9304d29ae596e04ba9bfbb30960e899326 SHA512 bf45849bf4efb67bc552767c28a6df6e5106a7d8ac2d73db2c7218412fb6cd2f2785c2be83a8589a5664ba9c0ca052cef5eb155c665ee1f3d6c7fe208f806a6b
 DIST molden5.5.tar.gz 4934764 BLAKE2B 6ce71f928ed9aacf8fe9830c4c36a675f81d63e97d08e96519ff74d172540ae0a9af25ca966d6c02cdcbbc43633a0ef80be9d31ef98a80d59a8e1a13374c2f51 SHA512 45269d2c7a52b3b2bf4fdb5f4ca3912637b3414ff9dfcd0d4f23815b3dcf7a53ffee717420d4fbf286b71c972539e756a440f5e37b7b7325ab312c25fc6c47b0
-EBUILD molden-4.8-r2.ebuild 1726 BLAKE2B ed9494e53f93b3de114e1032c88658628efe0e30af1b8670a32b090f7b6bd720c9a0795a4a4e5ba1fc7d6f50439b8f6b85e671854e1ae79e18d952356dce0483 SHA512 ca0772ada2086f91150f8a0ab2a86c9a9a6169a89e2c8c0f6b4ab4d368906f5d5d2807cd228e1f42292c6562d980a0e206f568433b396d23c7846beb65dd6f5a
-EBUILD molden-5.0.ebuild 1733 BLAKE2B 2d5e3657c53ae6f7ca67996d63ec98776d1de5330ae050b8d8191289d6800298bdccc1361b57df4573f2e99d2688edc09234a72b2c29431e482406c37bcf213e SHA512 0584ad6f157bab063a79b8e095dedec04e6a2f1d05d5483027dc8c7b0b8455956140ae69f9d6749b47ce69db30d62d391e9f7a7e00dba696d73687861d6bd604
 EBUILD molden-5.5.ebuild 1639 BLAKE2B 7f3b42046e10a433442cc664c6552c9f74ca5bc142da2bc5fe813cc7deb78d4cb1e9231c0554b0ec3d500f72c6104595c053555f66c28e982394fc973bda8455 SHA512 185d8c4004d0023b3663f13b793fb99a6f17573c1dfdc87602b97f0735cb4a52f4c9f7f833f01ccbf837f311ded87f61418c16d918955a67c9c962d149f3d054
 MISC metadata.xml 271 BLAKE2B a446884cbe7a6789e0bcd82759f57bf1ab7b29c5ab714057ffa821c90f799d1fa9f9310c187ee4c3a8ae2476f6ea9d15f368045779f1581e68d02802c61c884c SHA512 3e6e6047a29e07123b81279cae1de17bc4bd4c3d7d8a8d26560114a18185f473d038fc220fa81c7213fa203ce197bad8b1c272d9b7e41cd770a953fa6308ff92
diff --git a/sci-chemistry/molden/files/molden-4.8-ambfor.patch b/sci-chemistry/molden/files/molden-4.8-ambfor.patch
deleted file mode 100644
index 1ececa7f57e9..000000000000
--- a/sci-chemistry/molden/files/molden-4.8-ambfor.patch
+++ /dev/null
@@ -1,12 +0,0 @@
-diff -Naur molden4.8/ambfor/makefile molden4.8.new/ambfor/makefile
---- molden4.8/ambfor/makefile	2009-12-19 06:14:32.000000000 -0500
-+++ molden4.8.new/ambfor/makefile	2010-02-25 22:33:41.000000000 -0500
-@@ -32,7 +32,7 @@
- 	$(LDR) -o ambmd md.o verlet.o allocmd.o $(OBJS) $(LIBS)
- 
- ambfor.o:	ambfor.f
--	${FC} -c -g -ffast-math -funroll-loops -m32 -o ambfor.o ambfor.f
-+	${FC} $(FFLAGS) -c ambfor.f -o ambfor.o 
- 
- allocmd.o:	alloc.c
- 	$(CC) $(CFLAGS) -DMD -c alloc.c -o allocmd.o
diff --git a/sci-chemistry/molden/files/molden-4.8-overflow.patch b/sci-chemistry/molden/files/molden-4.8-overflow.patch
deleted file mode 100644
index 7cbd7f436f57..000000000000
--- a/sci-chemistry/molden/files/molden-4.8-overflow.patch
+++ /dev/null
@@ -1,38 +0,0 @@
- xwin.c |   10 ++++++----
- 1 files changed, 6 insertions(+), 4 deletions(-)
-
-diff --git a/xwin.c b/xwin.c
-index f395909..092edff 100644
---- a/xwin.c
-+++ b/xwin.c
-@@ -13552,7 +13552,7 @@ void NewActiveStruct()
- #ifdef CRAY
-     _fcd ztr;
- #else
--    char ztr;
-+    char ztr[4];
- #endif
- #endif
- 
-@@ -13650,8 +13650,10 @@ void NewActiveStruct()
- */
- 	clfpstr->ihashz = 0;
- #else
--	strncpy(&ztr,HetAtm[j],3);
--	parhet_(&j1,&ztr);
-+	if (HetAtm[j] != NULL) {
-+	   strncpy(ztr,HetAtm[j],3);
-+	   parhet_(&j1,ztr);
-+	}
- #endif
- #endif
-     }
-@@ -27353,7 +27355,7 @@ char *errstr;
- 	UpdateZME();
- 	RedrawScroll(&zscroll);
-     }
--    strcpy(ZMEerr,errstr);
-+    strncpy(ZMEerr,errstr,MAXZMEERR);
-     RedrawStatus();
- }
- 
diff --git a/sci-chemistry/molden/molden-4.8-r2.ebuild b/sci-chemistry/molden/molden-4.8-r2.ebuild
deleted file mode 100644
index f00761130395..000000000000
--- a/sci-chemistry/molden/molden-4.8-r2.ebuild
+++ /dev/null
@@ -1,76 +0,0 @@
-# Copyright 1999-2016 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=4
-
-inherit eutils fortran-2 flag-o-matic toolchain-funcs
-
-MY_P="${PN}${PV}"
-
-DESCRIPTION="Display molecular density from GAMESS-UK, GAMESS-US, GAUSSIAN and Mopac/Ampac"
-HOMEPAGE="http://www.cmbi.ru.nl/molden/"
-SRC_URI="ftp://ftp.cmbi.ru.nl/pub/molgraph/${PN}/${MY_P}.tar.gz"
-
-LICENSE="MOLDEN"
-SLOT="0"
-KEYWORDS="amd64 x86"
-IUSE="opengl"
-
-RDEPEND="
-	x11-libs/libXmu
-		virtual/glu
-	opengl? (
-		media-libs/freeglut
-		virtual/opengl )"
-DEPEND="${RDEPEND}
-	x11-misc/gccmakedep
-	app-editors/vim"
-	# vim provides ex, which the build system uses (surf/Makefile, at least)
-
-S="${WORKDIR}/${MY_P}"
-
-src_prepare() {
-	epatch \
-		"${FILESDIR}"/${P}-ambfor.patch \
-		"${FILESDIR}"/${P}-overflow.patch \
-		"${FILESDIR}"/${P}-ldflags.patch \
-		"${FILESDIR}"/${PN}-4.7-implicit-dec.patch
-	sed \
-		-e 's:makedepend:gccmakedep:g' \
-		-e "s:/usr/include/sgidefs.h::g" \
-		-i surf/Makefile || die
-	sed 's:shell g77:shell $(FC):g' -i makefile || die
-}
-
-src_compile() {
-	# Use -mieee on alpha, according to the Makefile
-	use alpha && append-flags -mieee
-
-	# Honor CC, CFLAGS, FC, and FFLAGS from environment;
-	# unfortunately a bash bug prevents us from doing typeset and
-	# assignment on the same line.
-	typeset -a args
-	args=(
-			CC="$(tc-getCC) ${CFLAGS}" \
-			FC="$(tc-getFC)" \
-			LDR="$(tc-getFC)" \
-			FFLAGS="${FFLAGS}" )
-
-	einfo "Building Molden..."
-	emake -j1 "${args[@]}"
-	if use opengl ; then
-		einfo "Building Molden OpenGL helper..."
-		emake -j1 "${args[@]}" moldenogl
-	fi
-}
-
-src_install() {
-	dobin ${PN} g${PN}
-	if use opengl ; then
-		dobin ${PN}ogl
-	fi
-
-	dodoc HISTORY README REGISTER
-	cd doc
-	uncompress * && dodoc *
-}
diff --git a/sci-chemistry/molden/molden-5.0.ebuild b/sci-chemistry/molden/molden-5.0.ebuild
deleted file mode 100644
index 52f4ccdcfed0..000000000000
--- a/sci-chemistry/molden/molden-5.0.ebuild
+++ /dev/null
@@ -1,76 +0,0 @@
-# Copyright 1999-2016 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=4
-
-inherit eutils fortran-2 flag-o-matic toolchain-funcs
-
-MY_P="${PN}${PV}"
-
-DESCRIPTION="Display molecular density from GAMESS-UK, GAMESS-US, GAUSSIAN and Mopac/Ampac"
-HOMEPAGE="http://www.cmbi.ru.nl/molden/"
-SRC_URI="ftp://ftp.cmbi.ru.nl/pub/molgraph/${PN}/${MY_P}.tar.gz"
-
-LICENSE="MOLDEN"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE="opengl"
-
-RDEPEND="
-	x11-libs/libXmu
-		virtual/glu
-	opengl? (
-		media-libs/freeglut
-		virtual/opengl )"
-DEPEND="${RDEPEND}
-	x11-misc/gccmakedep
-	app-editors/vim"
-	# vim provides ex, which the build system uses (surf/Makefile, at least)
-
-S="${WORKDIR}/${MY_P}"
-
-src_prepare() {
-	epatch \
-		"${FILESDIR}"/${P}-ambfor.patch \
-		"${FILESDIR}"/${P}-overflow.patch \
-		"${FILESDIR}"/${PN}-4.8-ldflags.patch \
-		"${FILESDIR}"/${PN}-4.7-implicit-dec.patch
-	sed \
-		-e 's:makedepend:gccmakedep:g' \
-		-e "s:/usr/include/sgidefs.h::g" \
-		-i surf/Makefile || die
-	sed 's:shell g77:shell $(FC):g' -i makefile || die
-}
-
-src_compile() {
-	# Use -mieee on alpha, according to the Makefile
-	use alpha && append-flags -mieee
-
-	# Honor CC, CFLAGS, FC, and FFLAGS from environment;
-	# unfortunately a bash bug prevents us from doing typeset and
-	# assignment on the same line.
-	typeset -a args
-	args=(
-			CC="$(tc-getCC) ${CFLAGS}" \
-			FC="$(tc-getFC)" \
-			LDR="$(tc-getFC)" \
-			FFLAGS="${FFLAGS}" )
-
-	einfo "Building Molden..."
-	emake -j1 "${args[@]}"
-	if use opengl ; then
-		einfo "Building Molden OpenGL helper..."
-		emake -j1 "${args[@]}" moldenogl
-	fi
-}
-
-src_install() {
-	dobin ${PN} g${PN}
-	if use opengl ; then
-		dobin ${PN}ogl
-	fi
-
-	dodoc HISTORY README REGISTER
-	cd doc
-	uncompress * && dodoc *
-}