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authorV3n3RiX <venerix@koprulu.sector>2024-08-07 12:37:21 +0100
committerV3n3RiX <venerix@koprulu.sector>2024-08-07 12:37:21 +0100
commitb8c7370a682e4e29cda623222d17a790c01c3642 (patch)
treef6caa14689bd00a5760eadaa381ff41e50ef3c1b /sci-libs/atlas
parent8a4997a7e2d1e36c089d4d76935b5a902d98d3d0 (diff)
gentoo auto-resync : 07:08:2024 - 12:37:20
Diffstat (limited to 'sci-libs/atlas')
-rw-r--r--sci-libs/atlas/Manifest8
-rw-r--r--sci-libs/atlas/atlas-3.10.2-r1.ebuild (renamed from sci-libs/atlas/atlas-3.10.2.ebuild)18
-rw-r--r--sci-libs/atlas/atlas-3.10.3.ebuild225
-rw-r--r--sci-libs/atlas/atlas-3.11.41.ebuild225
-rw-r--r--sci-libs/atlas/files/atlas-3.10.3-fix-ancient-c.patch297
5 files changed, 761 insertions, 12 deletions
diff --git a/sci-libs/atlas/Manifest b/sci-libs/atlas/Manifest
index 5f68dcd06051..4cda34da9815 100644
--- a/sci-libs/atlas/Manifest
+++ b/sci-libs/atlas/Manifest
@@ -1,6 +1,12 @@
AUX atlas-3.10.2-format-security.patch 8872 BLAKE2B 146136803b7c62f40847e6dbc3acc9422c5fda23383c0fb672b7bb34581898c852756992905d28f7ad1321cefd3ac027958e77971501030157d8e4e1f04d29c2 SHA512 151add96a1e34f99eb37d83e31018797a5737cf9e1ffb9d2fa459f9811dabae1e8fada3a8790618fd24abc7a43255b3694d4f3b9775d3478f1ffe4bc9c314252
AUX atlas-3.10.2-x32-support.patch 3410 BLAKE2B ba2f45ef71805d51aef7280876a825f522ac7eaa6210d1283be3a8a62cf2a0511003c9127393360a43010d29e86467f1c8bbf3be2bebaa37123313a77268e113 SHA512 ba30f795031457a4416978fadd76870aa09fa7af93f10bc5f0258a44d98151fa37c72813a999048927fc9a521e52d2eb9f01b4f7423baa4d0bad099eb0ee06cb
+AUX atlas-3.10.3-fix-ancient-c.patch 8185 BLAKE2B cf8e922aa19276162e19ca671acbe9e5e469d5a8520ddc01fd24d269535c31afd0da98465f835ba5726865b97f34f7c5b39ea65008f3e0ef4b42f6311620ccbf SHA512 c8b423eebaeb42130f61f622e8d0bf5555b5560cf1e859a1b1b7781ff042d1570425a44df48d5826a4ef7f99e6ad47c88231471ef68eba0e67de8d88058a7ec4
DIST atlas3.10.2.tar.bz2 4904923 BLAKE2B e2fb0d307907549644cb678c32c4befce7ce6809c348a11fa6084e17d696da8681b3388dd63d8bdee6040999d9ab38a75f1788b42640121a536eb5f13e6f8939 SHA512 9fe04cfa1f89449db047d1a4659a656964d13117c783cbbe43344eb32555736f037d9cd30c5ae1514c08ad5b8949a3982d7fe102d707ddb62288e76b2607fbb1
+DIST atlas3.10.3.tar.bz2 5156852 BLAKE2B cd3880a6d0c43b5840d4da26ac996cc9fe7615fc996229193ef1f936daa2c54c5465643def19f59dd5c481c447176e2ba3cf85d38c0b5008c2dc1bc18be0e65b SHA512 bf17306f09f2aa973cb776e2c9eacfb2409ad4d95d19802e1c4e0597d0a099fccdb5eaafe273c2682a41e41a3c6fabc8bbba4ce03180cffea40ede5df1d1f56e
+DIST atlas3.11.41.tar.bz2 6644195 BLAKE2B c046725f1a8978e345cb59026b93029483ecdfa0151256cca5dcdd337ced2a63819c19319795b663cd12180e8be0db475a3d1c1a5d76296ef333f99887d9e44a SHA512 06306c588505dcf22a1afa0f57d85b0008728deb5876e66b2710fee29712b979aa63eafc9142be2372b9895ba594cc5aba230aa3d1ddc95932af1e585478204d
+DIST lapack-3.12.0.tar.gz 7933607 BLAKE2B dafb1f9a717f2cbc00a26f8cff2c7a1ebb720714fe6d7bd5fabb511a2f4af317165814340864c9d601e4e16c7762f643fbbafc058170ebcdc6529a9b4f2d70b6 SHA512 f8f3c733a0221be0b3f5618235408ac59cbd4e5f1c4eab5f509b831a6ec6a9ef14b8849aa6ea10810df1aff90186ca454d15e9438d1dd271c2449d42d3da9dda
DIST lapack-3.6.0.tgz 6792324 BLAKE2B 438f3376b63b38ef0fe70f6becac847816f3a11c01f5ab237dc0d941792ceb54dbd2f8dc22d56286f5dab3499289ed94e67521ea951a98973c9640abc294ad6c SHA512 bc50441d415ef8896dd7626d77c6104184b996e758704366288089f03d4c99d068e33153b0d13305310886017e5d2e716130f812a95cfcad36ef37fe20417ab8
-EBUILD atlas-3.10.2.ebuild 5628 BLAKE2B 665ae5186574dad553800439446f63785df44977e94f10246c7913f4c16c650065771ab590f538ac5515ce986a29a3f40a57f363820ced5001b77aa4375fd084 SHA512 c01abb2b0af5f728a4a70de22862eaf58731fdafa3afcc3286cc73fb2d22e463967b8263ea977db4ca41173be84771ee57e7dd473a08d4ad651513d2e85cdcd7
+EBUILD atlas-3.10.2-r1.ebuild 5560 BLAKE2B 9502f57aac61fb78938406066ba56b61458f48c4bcc651ce605581bb16da29df245819a7f807b0863b190fc5e232ecdcb879e41eb98c8b1bccad332b6d5d2663 SHA512 324d20f0a666f3ee3a60a1c3a00831a141998c63e5cfe41f1750f1a3a67d0f987bb65cc22dbc638bd3a13c597c1fc66e1f04ebe9d5f69b61ab3a33f9dc24be43
+EBUILD atlas-3.10.3.ebuild 5891 BLAKE2B 3b9b82639d95f5031a67692177cbe789796dd9c7ffa2aad9d3e53078472fa13288462261e1b602474ad2d738cc4c6bf32ade3472c30b32026a12d59f7aa4b999 SHA512 9a27623f377b84b57dd36a0f093ba5ca0db996ee78255066b3f5e77184ca294e73f770a895ebc9b64407f99438a0bfa8ec65d8543a04c409de1637fa430d7902
+EBUILD atlas-3.11.41.ebuild 5887 BLAKE2B c91954f3843f50d532b90756dbf2ba436ead1d07e6066a01b5b4b2b8a20dfab4bdb6cfd1de98c3209285ccc871aa2fa7981c6eb199c08a429631e69917d9b0c3 SHA512 d890c1ab87bdca5014220d4558238877c3f191abf58c02e06eaec390f2327094e7bf7b1106f1257228fd26db14f3da40f01b09b34b7a2dee968202a8f8f90f59
MISC metadata.xml 935 BLAKE2B cf5e711f899988c36d4ffc63997c963a4ee30e7ac57de0415424e32699379d6595ac9e52cca8760f2b49af527d01b6a4e28bccdb762e5f9c220ae4da99899879 SHA512 5cb05a261bedbd08274d72ea3a4c2843fc39c0ca27d2b8e144310035feab40ec3abfd07438db062bc4c5fc7306be27ceb0fe97d1d24c68bea56683ceb55e7b9b
diff --git a/sci-libs/atlas/atlas-3.10.2.ebuild b/sci-libs/atlas/atlas-3.10.2-r1.ebuild
index 43582741de1a..88ac1701512c 100644
--- a/sci-libs/atlas/atlas-3.10.2.ebuild
+++ b/sci-libs/atlas/atlas-3.10.2-r1.ebuild
@@ -1,11 +1,11 @@
# Copyright 1999-2024 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
-EAPI=6
+EAPI=8
FORTRAN_NEEDED=fortran
-inherit fortran-2 toolchain-funcs versionator
+inherit fortran-2 toolchain-funcs
LAPACKP=lapack-3.6.0.tgz
@@ -13,17 +13,13 @@ DESCRIPTION="Automatically Tuned Linear Algebra Software"
HOMEPAGE="https://math-atlas.sourceforge.net"
SRC_URI="https://downloads.sourceforge.net/math-atlas/${PN}${PV}.tar.bz2
fortran? ( lapack? ( http://www.netlib.org/lapack/${LAPACKP} ) )"
+S="${WORKDIR}/ATLAS"
LICENSE="BSD"
SLOT="0"
KEYWORDS="amd64 ~x86 ~amd64-linux ~x86-linux"
IUSE="doc fortran generic lapack static-libs threads"
-RDEPEND=""
-DEPEND="${RDEPEND}"
-
-S="${WORKDIR}/ATLAS"
-
PATCHES=(
"${FILESDIR}/${P}-x32-support.patch"
"${FILESDIR}/${P}-format-security.patch"
@@ -48,9 +44,9 @@ src_configure() {
[[ ${mycc} == *gcc* ]] && mycc=gcc
atlas_configure() {
local myconf=(
- --prefix="${ED}/usr"
- --libdir="${ED}/usr/$(get_libdir)"
- --incdir="${ED}/usr/include"
+ --prefix="/usr"
+ --libdir="/usr/$(get_libdir)"
+ --incdir="/usr/include"
--cc="$(tc-getCC)"
"-D c -DWALL"
"-C acg '${mycc}'"
@@ -143,7 +139,7 @@ src_test() {
atlas_install_libs() {
local libname=$(basename ${1%.*})
einfo "Installing ${libname}"
- local soname=${libname}.so.$(get_major_version)
+ local soname=${libname}.so.$(ver_cut 1)
shift
pushd "${S}_shared"/lib > /dev/null
${LINK:-$(tc-getCC)} ${LDFLAGS} -shared -Wl,-soname=${soname} \
diff --git a/sci-libs/atlas/atlas-3.10.3.ebuild b/sci-libs/atlas/atlas-3.10.3.ebuild
new file mode 100644
index 000000000000..aa0e6a6826fb
--- /dev/null
+++ b/sci-libs/atlas/atlas-3.10.3.ebuild
@@ -0,0 +1,225 @@
+# Copyright 1999-2024 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=8
+
+FORTRAN_NEEDED=fortran
+
+inherit fortran-2 toolchain-funcs
+
+LAPACKPV=3.12.0
+
+DESCRIPTION="Automatically Tuned Linear Algebra Software"
+HOMEPAGE="https://math-atlas.sourceforge.net"
+SRC_URI="https://downloads.sourceforge.net/math-atlas/${PN}${PV}.tar.bz2
+ fortran? ( lapack? (
+ https://github.com/Reference-LAPACK/lapack/archive/refs/tags/v${LAPACKPV}.tar.gz
+ -> lapack-${LAPACKPV}.tar.gz
+ ) )
+"
+S="${WORKDIR}/ATLAS"
+
+LICENSE="BSD"
+SLOT="0"
+KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
+IUSE="doc fortran generic lapack static-libs threads"
+
+PATCHES=(
+ "${FILESDIR}/${PN}-3.10.2-x32-support.patch"
+ "${FILESDIR}/${PN}-3.10.2-format-security.patch"
+ "${FILESDIR}/${PN}-3.10.3-fix-ancient-c.patch"
+)
+
+pkg_setup() {
+ local _cpufreq
+ for _cpufreq in /sys/devices/system/cpu/cpu*/cpufreq/scaling_governor; do
+ if [[ -f ${_cpufreq} ]]; then
+ if ! grep -q performance "${_cpufreq}"; then
+ echo 2> /dev/null performance > "${_cpufreq}" || \
+ die "${PN} needs all cpu set to performance"
+ fi
+ fi
+ done
+ use fortran && fortran-2_pkg_setup
+}
+
+src_configure() {
+ # hack needed to trick the flaky gcc detection
+ local mycc
+ mycc="$(type -P "$(tc-getCC)")"
+ [[ ${mycc} == *gcc* ]] && mycc=gcc
+ atlas_configure() {
+ local myconf=(
+ --cripple-atlas-performance
+ --prefix="/usr"
+ --libdir="/usr/$(get_libdir)"
+ --incdir="/usr/include"
+ --cc="$(tc-getCC)"
+ "-D c -DWALL"
+ "-C acg '${mycc}'"
+ "-F acg '${CFLAGS}'"
+ "-Ss pmake '\$(MAKE) ${MAKEOPTS}'"
+ )
+
+ # OpenMP shown to decreased performance over POSIX threads
+ # (at least in 3.9.x, see atlas-dev mailing list)
+ if use threads; then
+ if use generic; then # 2 threads is most generic
+ myconf+=( "-t 2" "-Si omp 0" )
+ else
+ myconf+=( "-t -1" "-Si omp 0" )
+ fi
+ else
+ myconf+=( "-t 0" "-Si omp 0" )
+ fi
+
+ if use amd64 || use ppc64 || use sparc; then
+ if [[ ${ABI} = amd64 ]] || [[ ${ABI} = ppc64 ]] || [[ ${ABI} = sparc64 ]] ; then
+ myconf+=( "-b 64" )
+ elif [[ ${ABI} = x86 ]] || [[ ${ABI} = ppc ]] || [[ ${ABI} = sparc32 ]] ; then
+ myconf+=( "-b 32" )
+ elif [[ ${ABI} = x32 ]] ; then
+ myconf+=( "-b 48" )
+ else
+ myconf+=( "-b 64" )
+ fi
+ elif use ppc || use x86; then
+ myconf+=( "-b 32" )
+ elif use ia64; then
+ myconf+=( "-b 64" )
+ fi
+ if use fortran; then
+ myconf+=(
+ "-C if '$(type -P "$(tc-getFC)")'"
+ "-F if '${FFLAGS}'"
+ )
+ if use lapack; then
+ myconf+=(
+ "-Si latune 1"
+ "--with-netlib-lapack-tarfile=${DISTDIR}/lapack-${LAPACKPV}.tar.gz"
+ )
+ else
+ myconf+=( "-Si latune 0" )
+ fi
+ else
+ myconf+=( "-Si latune 0" "--nof77" )
+ fi
+ # generic stuff found by make make xprint_enums in atlas build dir
+ # basically assuming sse2+sse1 and 2 threads max
+ use generic && use x86 && myconf+=( "-V 384 -A 13")
+ use generic && use amd64 && myconf+=( "-V 384 -A 24")
+
+ local confdir="${S}_${1}"; shift
+ myconf+=( $@ )
+ mkdir "${confdir}" || die
+ cd "${confdir}" || die
+ # for debugging
+ echo "${myconf[@]}" > myconf.out
+ "${S}"/configure ${myconf[@]} || die "configure in ${confdir} failed"
+ }
+
+ atlas_configure shared "-Fa alg -fPIC" ${EXTRA_ECONF}
+ use static-libs && atlas_configure static ${EXTRA_ECONF}
+}
+
+src_compile() {
+ atlas_compile() {
+ pushd "${S}_${1}" > /dev/null || die
+ # atlas does its own parallel builds
+ emake -j1 build
+ cd lib || die
+ emake libclapack.a
+ [[ -e libptcblas.a ]] && emake libptclapack.a
+ popd > /dev/null || die
+ }
+
+ atlas_compile shared
+ use static-libs && atlas_compile static
+}
+
+src_test() {
+ cd "${S}_shared" || die
+ emake -j1 check time
+}
+
+# transform a static archive into a shared library and install them
+# atlas_install_libs <mylib.a> [extra link flags]
+atlas_install_libs() {
+ local libname soname
+ libname=$(basename "${1%.*}")
+ einfo "Installing ${libname}"
+ soname=${libname}.so.$(ver_cut 1)
+ shift
+ pushd "${S}_shared"/lib > /dev/null || die
+ ${LINK:-$(tc-getCC)} ${LDFLAGS} -shared "-Wl,-soname=${soname}" \
+ -Wl,--whole-archive "${libname}.a" -Wl,--no-whole-archive \
+ $@ -o "${soname}" || die "Creating ${soname} failed"
+ dolib.so "${soname}"
+ ln -s "${soname}" "${soname%.*}"
+ dosym "${soname}" "/usr/$(get_libdir)/${soname%.*}"
+ popd > /dev/null || die
+ use static-libs && dolib.a "${S}_static/lib/${libname}.a"
+}
+
+src_install() {
+ cd "${S}_shared/lib" || die
+ # rename to avoid collision with other packages
+ local l
+ for l in {,c}{blas,lapack}; do
+ if [[ -e lib${l}.a ]]; then
+ mv lib{,atl}"${l}.a"
+ use static-libs && mv "${S}"_static/lib/lib{,atl}"${l}.a"
+ fi
+ done
+
+ [[ -e libptcblas.a ]] && PTLIBS="-lpthread"
+
+ # atlas
+ atlas_install_libs libatlas.a -lm "${PTLIBS}"
+
+ # cblas
+ atlas_install_libs libatlcblas.a -lm -L. -latlas
+
+ # cblas threaded
+ [[ -e libptcblas.a ]] && \
+ atlas_install_libs libptcblas.a -lm -L. -latlas "${PTLIBS}"
+
+ if use lapack; then
+ # clapack
+ atlas_install_libs libatlclapack.a -lm -L. -latlas -latlcblas
+
+ # clapack threaded
+ [[ -e libptclapack.a ]] && \
+ atlas_install_libs libptclapack.a -lm -L. -latlas -lptcblas "${PTLIBS}"
+ fi
+
+ if use fortran; then
+ LINK=$(tc-getF77)
+
+ # blas
+ atlas_install_libs libf77blas.a -lm -L. -latlas
+
+ # blas threaded
+ [[ -e libptf77blas.a ]] && \
+ atlas_install_libs libptf77blas.a -lm -L. -latlas "${PTLIBS}"
+
+ if use lapack; then
+ # lapack
+ atlas_install_libs libatllapack.a \
+ -lm -L. -latlas -latlcblas -lf77blas
+ # lapack threaded
+ [[ -e libptlapack.a ]] && \
+ atlas_install_libs libptlapack.a -lm -L. -latlas -lptcblas -lptf77blas "${PTLIBS}"
+ fi
+ fi
+
+ cd "${S}" || die
+ insinto "/usr/include/${PN}"
+ doins include/*.h
+
+ cd "${S}/doc" || die
+ dodoc INDEX.txt AtlasCredits.txt ChangeLog
+ use doc && dodoc atlas*pdf cblas.pdf cblasqref.pdf
+ use doc && use fortran && dodoc f77blas*pdf
+ use doc && use fortran && use lapack && dodoc -- *lapack*pdf
+}
diff --git a/sci-libs/atlas/atlas-3.11.41.ebuild b/sci-libs/atlas/atlas-3.11.41.ebuild
new file mode 100644
index 000000000000..f4a8920320ab
--- /dev/null
+++ b/sci-libs/atlas/atlas-3.11.41.ebuild
@@ -0,0 +1,225 @@
+# Copyright 1999-2024 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=8
+
+FORTRAN_NEEDED=fortran
+
+inherit fortran-2 toolchain-funcs
+
+LAPACKPV=3.12.0
+
+DESCRIPTION="Automatically Tuned Linear Algebra Software"
+HOMEPAGE="https://math-atlas.sourceforge.net"
+SRC_URI="https://downloads.sourceforge.net/math-atlas/${PN}${PV}.tar.bz2
+ fortran? ( lapack? (
+ https://github.com/Reference-LAPACK/lapack/archive/refs/tags/v${LAPACKPV}.tar.gz
+ -> lapack-${LAPACKPV}.tar.gz
+ ) )
+"
+S="${WORKDIR}/ATLAS"
+
+LICENSE="BSD"
+SLOT="0"
+KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
+IUSE="doc fortran generic lapack static-libs threads"
+
+PATCHES=(
+ # TODO These don't apply, find out why
+ # "${FILESDIR}/${PN}-3.10.2-x32-support.patch"
+ # "${FILESDIR}/${PN}-3.10.2-format-security.patch"
+)
+
+pkg_setup() {
+ local _cpufreq
+ for _cpufreq in /sys/devices/system/cpu/cpu*/cpufreq/scaling_governor; do
+ if [[ -f ${_cpufreq} ]]; then
+ if ! grep -q performance "${_cpufreq}"; then
+ echo 2> /dev/null performance > "${_cpufreq}" || \
+ die "${PN} needs all cpu set to performance"
+ fi
+ fi
+ done
+ use fortran && fortran-2_pkg_setup
+}
+
+src_configure() {
+ # hack needed to trick the flaky gcc detection
+ local mycc
+ mycc="$(type -P "$(tc-getCC)")"
+ [[ ${mycc} == *gcc* ]] && mycc=gcc
+ atlas_configure() {
+ local myconf=(
+ --cripple-atlas-performance
+ --prefix="/usr"
+ --libdir="/usr/$(get_libdir)"
+ --incdir="/usr/include"
+ --cc="$(tc-getCC)"
+ "-D c -DWALL"
+ "-C acg '${mycc}'"
+ "-F acg '${CFLAGS}'"
+ "-Ss pmake '\$(MAKE) ${MAKEOPTS}'"
+ )
+
+ # OpenMP shown to decreased performance over POSIX threads
+ # (at least in 3.9.x, see atlas-dev mailing list)
+ if use threads; then
+ if use generic; then # 2 threads is most generic
+ myconf+=( "-t 2" "-Si omp 0" )
+ else
+ myconf+=( "-t -1" "-Si omp 0" )
+ fi
+ else
+ myconf+=( "-t 0" "-Si omp 0" )
+ fi
+
+ if use amd64 || use ppc64 || use sparc; then
+ if [[ ${ABI} = amd64 ]] || [[ ${ABI} = ppc64 ]] || [[ ${ABI} = sparc64 ]] ; then
+ myconf+=( "-b 64" )
+ elif [[ ${ABI} = x86 ]] || [[ ${ABI} = ppc ]] || [[ ${ABI} = sparc32 ]] ; then
+ myconf+=( "-b 32" )
+ elif [[ ${ABI} = x32 ]] ; then
+ myconf+=( "-b 48" )
+ else
+ myconf+=( "-b 64" )
+ fi
+ elif use ppc || use x86; then
+ myconf+=( "-b 32" )
+ elif use ia64; then
+ myconf+=( "-b 64" )
+ fi
+ if use fortran; then
+ myconf+=(
+ "-C if '$(type -P "$(tc-getFC)")'"
+ "-F if '${FFLAGS}'"
+ )
+ if use lapack; then
+ myconf+=(
+ "-Si latune 1"
+ "--with-netlib-lapack-tarfile=${DISTDIR}/lapack-${LAPACKPV}.tar.gz"
+ )
+ else
+ myconf+=( "-Si latune 0" )
+ fi
+ else
+ myconf+=( "-Si latune 0" "--nof77" )
+ fi
+ # generic stuff found by make make xprint_enums in atlas build dir
+ # basically assuming sse2+sse1 and 2 threads max
+ use generic && use x86 && myconf+=( "-V 384 -A 13")
+ use generic && use amd64 && myconf+=( "-V 384 -A 24")
+
+ local confdir="${S}_${1}"; shift
+ myconf+=( $@ )
+ mkdir "${confdir}" || die
+ cd "${confdir}" || die
+ # for debugging
+ echo "${myconf[@]}" > myconf.out
+ "${S}"/configure ${myconf[@]} || die "configure in ${confdir} failed"
+ }
+
+ atlas_configure shared "-Fa alg -fPIC" ${EXTRA_ECONF}
+ use static-libs && atlas_configure static ${EXTRA_ECONF}
+}
+
+src_compile() {
+ atlas_compile() {
+ pushd "${S}_${1}" > /dev/null || die
+ # atlas does its own parallel builds
+ emake -j1 build
+ cd lib || die
+ emake libclapack.a
+ [[ -e libptcblas.a ]] && emake libptclapack.a
+ popd > /dev/null || die
+ }
+
+ atlas_compile shared
+ use static-libs && atlas_compile static
+}
+
+src_test() {
+ cd "${S}_shared" || die
+ emake -j1 check time
+}
+
+# transform a static archive into a shared library and install them
+# atlas_install_libs <mylib.a> [extra link flags]
+atlas_install_libs() {
+ local libname soname
+ libname=$(basename "${1%.*}")
+ einfo "Installing ${libname}"
+ soname=${libname}.so.$(ver_cut 1)
+ shift
+ pushd "${S}_shared"/lib > /dev/null || die
+ ${LINK:-$(tc-getCC)} ${LDFLAGS} -shared "-Wl,-soname=${soname}" \
+ -Wl,--whole-archive "${libname}.a" -Wl,--no-whole-archive \
+ $@ -o "${soname}" || die "Creating ${soname} failed"
+ dolib.so "${soname}"
+ ln -s "${soname}" "${soname%.*}"
+ dosym "${soname}" "/usr/$(get_libdir)/${soname%.*}"
+ popd > /dev/null || die
+ use static-libs && dolib.a "${S}_static/lib/${libname}.a"
+}
+
+src_install() {
+ cd "${S}_shared/lib" || die
+ # rename to avoid collision with other packages
+ local l
+ for l in {,c}{blas,lapack}; do
+ if [[ -e lib${l}.a ]]; then
+ mv lib{,atl}"${l}.a"
+ use static-libs && mv "${S}"_static/lib/lib{,atl}"${l}.a"
+ fi
+ done
+
+ [[ -e libptcblas.a ]] && PTLIBS="-lpthread"
+
+ # atlas
+ atlas_install_libs libatlas.a -lm "${PTLIBS}"
+
+ # cblas
+ atlas_install_libs libatlcblas.a -lm -L. -latlas
+
+ # cblas threaded
+ [[ -e libptcblas.a ]] && \
+ atlas_install_libs libptcblas.a -lm -L. -latlas "${PTLIBS}"
+
+ if use lapack; then
+ # clapack
+ atlas_install_libs libatlclapack.a -lm -L. -latlas -latlcblas
+
+ # clapack threaded
+ [[ -e libptclapack.a ]] && \
+ atlas_install_libs libptclapack.a -lm -L. -latlas -lptcblas "${PTLIBS}"
+ fi
+
+ if use fortran; then
+ LINK=$(tc-getF77)
+
+ # blas
+ atlas_install_libs libf77blas.a -lm -L. -latlas
+
+ # blas threaded
+ [[ -e libptf77blas.a ]] && \
+ atlas_install_libs libptf77blas.a -lm -L. -latlas "${PTLIBS}"
+
+ if use lapack; then
+ # lapack
+ atlas_install_libs libatllapack.a \
+ -lm -L. -latlas -latlcblas -lf77blas
+ # lapack threaded
+ [[ -e libptlapack.a ]] && \
+ atlas_install_libs libptlapack.a -lm -L. -latlas -lptcblas -lptf77blas "${PTLIBS}"
+ fi
+ fi
+
+ cd "${S}" || die
+ insinto "/usr/include/${PN}"
+ doins include/*.h
+
+ cd "${S}/doc" || die
+ dodoc INDEX.txt AtlasCredits.txt ChangeLog
+ use doc && dodoc atlas*pdf cblas.pdf cblasqref.pdf
+ use doc && use fortran && dodoc f77blas*pdf
+ use doc && use fortran && use lapack && dodoc -- *lapack*pdf
+}
diff --git a/sci-libs/atlas/files/atlas-3.10.3-fix-ancient-c.patch b/sci-libs/atlas/files/atlas-3.10.3-fix-ancient-c.patch
new file mode 100644
index 000000000000..5a8a257a1a9b
--- /dev/null
+++ b/sci-libs/atlas/files/atlas-3.10.3-fix-ancient-c.patch
@@ -0,0 +1,297 @@
+From 3d330dc50a608581c81d269b661af0c938155428 Mon Sep 17 00:00:00 2001
+From: Paul Zander <negril.nx+gentoo@gmail.com>
+Date: Fri, 26 Jul 2024 00:10:33 +0200
+Subject: [PATCH 1/5] main must return int
+
+Signed-off-by: Paul Zander <negril.nx+gentoo@gmail.com>
+--- a/CONFIG/src/backend/archinfo_aix.c
++++ b/CONFIG/src/backend/archinfo_aix.c
+@@ -180,7 +180,7 @@ int ProbeThrottle()
+ return(iret);
+ }
+
+-main(int nargs, char **args)
++int main(int nargs, char **args)
+ {
+ int flags, CacheLevel, ncpu, mhz, bits, sure;
+ enum MACHTYPE arch=MACHOther;
+--- a/CONFIG/src/backend/archinfo_freebsd.c
++++ b/CONFIG/src/backend/archinfo_freebsd.c
+@@ -243,7 +243,7 @@ int ProbeThrottle()
+ return(iret);
+ }
+
+-main(int nargs, char **args)
++int main(int nargs, char **args)
+ {
+ int flags, CacheLevel, ncpu, mhz, bits, sure;
+ enum MACHTYPE arch=MACHOther;
+--- a/CONFIG/src/backend/archinfo_irix.c
++++ b/CONFIG/src/backend/archinfo_irix.c
+@@ -198,7 +198,7 @@ int ProbeThrottle()
+ return(iret);
+ }
+
+-main(int nargs, char **args)
++int main(int nargs, char **args)
+ {
+ int flags, CacheLevel, ncpu, mhz, bits, sure;
+ enum MACHTYPE arch=MACHOther;
+--- a/CONFIG/src/backend/archinfo_linux.c
++++ b/CONFIG/src/backend/archinfo_linux.c
+@@ -571,7 +571,7 @@ int ProbeThrottle()
+ return(iret);
+ }
+
+-main(int nargs, char **args)
++int main(int nargs, char **args)
+ {
+ int flags, CacheLevel, ncpu, mhz, bits, sure;
+ enum MACHTYPE arch=MACHOther;
+--- a/CONFIG/src/backend/archinfo_sfu.c
++++ b/CONFIG/src/backend/archinfo_sfu.c
+@@ -151,7 +151,7 @@ int ProbeThrottle()
+ return(iret);
+ }
+
+-main(int nargs, char **args)
++int main(int nargs, char **args)
+ {
+ int flags, CacheLevel, ncpu, mhz, bits, sure;
+ enum MACHTYPE arch=MACHOther;
+--- a/CONFIG/src/backend/archinfo_sunos.c
++++ b/CONFIG/src/backend/archinfo_sunos.c
+@@ -212,7 +212,7 @@ int ProbeThrottle()
+ return(iret);
+ }
+
+-main(int nargs, char **args)
++int main(int nargs, char **args)
+ {
+ int flags, CacheLevel, ncpu, mhz, bits, sure;
+ enum MACHTYPE arch=MACHOther;
+--- a/CONFIG/src/backend/archinfo_win.c
++++ b/CONFIG/src/backend/archinfo_win.c
+@@ -221,7 +221,7 @@ int ProbeThrottle()
+ return(iret);
+ }
+
+-main(int nargs, char **args)
++int main(int nargs, char **args)
+ {
+ int flags, CacheLevel, ncpu, mhz, bits, sure;
+ enum MACHTYPE arch=MACHOther;
+--- a/CONFIG/src/backend/archinfo_x86.c
++++ b/CONFIG/src/backend/archinfo_x86.c
+@@ -460,7 +460,7 @@ int GetFlags(int nargs, char **args, int *CacheLevel)
+ return(flag);
+ }
+
+-main(int nargs, char **args)
++int main(int nargs, char **args)
+ {
+ int ierr, x86_64, flags, CacheLevel;
+ unsigned family, model;
+--- a/bin/extract.c
++++ b/bin/extract.c
+@@ -3904,7 +3904,7 @@ void HandleLine(EXTENV *EE, char *line)
+ }
+
+
+-main(int nargs, char *args[])
++int main(int nargs, char *args[])
+ {
+ char line[LNLEN], *path;
+ int i;
+--- a/bin/gpmmtst.c
++++ b/bin/gpmmtst.c
+@@ -783,11 +783,11 @@ void GetFlags(int nargs, char *args[], int *TEST,
+ #endif
+ }
+ }
+-___main(){}
+-__main(){}
+-MAIN__(){}
+-_MAIN_(){}
+-main(int nargs, char *args[])
++int ___main(){}
++int __main(){}
++int MAIN__(){}
++int _MAIN_(){}
++int main(int nargs, char *args[])
+ /*
+ * tst <tst> <# TA> <TA's> <# TB's> <TB's> <M0> <MN> <incM> <N0> <NN> <incN>
+ * <K0> <KN> <incK> <# alphas> <alphas> <# betas> <betas>
+--- a/bin/invtst.c
++++ b/bin/invtst.c
+@@ -743,7 +743,7 @@ void GetFlags(int nargs, char **args, int *MFLOP, int *CacheSize, TYPE *thresh,
+ }
+ }
+
+-main(int nargs, char **args)
++int main(int nargs, char **args)
+ {
+ int MFLOP, CacheSize, ldagap, nord, nuplo, N0, NN, incN;
+ enum TEST_UPLO *Uplo;
+--- a/bin/llttst.c
++++ b/bin/llttst.c
+@@ -538,7 +538,7 @@ void GetFlags(int nargs, char **args, int *MFLOP, int *CacheSize, TYPE *thresh,
+ }
+ }
+
+-main(int nargs, char **args)
++int main(int nargs, char **args)
+ {
+ int MFLOP, CacheSize, ldagap, nuplo, N0, NN, incN;
+ TYPE thresh;
+--- a/bin/lutst.c
++++ b/bin/lutst.c
+@@ -476,7 +476,7 @@ void GetFlags(int nargs, char **args, int *MFLOP, int *CacheSize, TYPE *thresh,
+ if (*M0 == -1) *M0 = *MN = *incM = *MisN = 1;
+ }
+
+-main(int nargs, char **args)
++int main(int nargs, char **args)
+ {
+ int MFLOP, CacheSize, LdaIsM, MisN, NisM, M0, MN, incM, N0, NN, incN;
+ int norders;
+--- a/bin/slvtst.c
++++ b/bin/slvtst.c
+@@ -743,7 +743,7 @@ static int DoAllTests(int nrep, int N0, int NN, int incN, int R0, int RN,
+ else fprintf(stdout, "\n%d TESTS RUN, %d FAILED!!\n\n", i, ierr);
+ return(ierr);
+ }
+-main(int nargs, char **args)
++int main(int nargs, char **args)
+ {
+ int ierr, N0, NN, incN, R0, RN, incR, ldagap, ldbgap, nord, nuplo;
+ int CS, MFLOP, QR, nrep;
+--- a/bin/uumtst.c
++++ b/bin/uumtst.c
+@@ -566,7 +566,7 @@ void GetFlags(int nargs, char **args, int *MFLOP, int *CacheSize, TYPE *thresh,
+ }
+ }
+
+-main(int nargs, char **args)
++int main(int nargs, char **args)
+ {
+ int MFLOP, CacheSize, ldagap, nuplo, N0, NN, incN;
+ TYPE thresh;
+--- a/lib/qr.c
++++ b/lib/qr.c
+@@ -5,7 +5,7 @@
+ #elif defined(UpCase)
+ #define dgeqrf_ DGEQRF
+ #endif
+-main(int nargs, char **args)
++int main(int nargs, char **args)
+ {
+ extern void dgeqrf_(F77_INTEGER*,F77_INTEGER*,double*,F77_INTEGER*,
+ double*,double*,F77_INTEGER*,F77_INTEGER*);
+--- a/lib/test_dynlink.c
++++ b/lib/test_dynlink.c
+@@ -1,6 +1,6 @@
+ #include <cblas.h>
+ #include <clapack.h>
+-main(int nargs, char **args)
++int main(int nargs, char **args)
+ {
+ double A[1]={1.0}, b[1]={1.0};
+ int ipiv[1];
+--- a/tune/sysinfo/masrch.c
++++ b/tune/sysinfo/masrch.c
+@@ -169,7 +169,7 @@ int FindMflop
+ return(mf);
+ }
+
+-FindNreg
++int FindNreg
+ (
+ char pre, /* precision: s,d,q */
+ int fmf, /* number of mflops to force timer on */
+--
+2.45.2
+
+
+From 537f1afe821d5bad24fe401c8cb1294f2235f5b7 Mon Sep 17 00:00:00 2001
+From: Paul Zander <negril.nx+gentoo@gmail.com>
+Date: Fri, 26 Jul 2024 00:11:42 +0200
+Subject: [PATCH 2/5] add missing function declarations
+
+Signed-off-by: Paul Zander <negril.nx+gentoo@gmail.com>
+--- a/CONFIG/include/atlconf_misc.h
++++ b/CONFIG/include/atlconf_misc.h
+@@ -41,6 +41,8 @@ char *NameWithoutPath(char *file);
+ char *GetPathWithoutName(char *file);
+ void GetGccVers(char *gcc, int *comp, int *major, int *minor, int *patch);
+ int CompIsGcc(char *comp);
++int CompIsClang(char *comp);
++int CompIsMinGW(char *comp);
+ int CompIsAppleGcc(char *comp);
+ int CompIsMIPSpro(char *comp);
+ int CompIsPathScale(char *comp);
+--
+2.45.2
+
+
+From 975b10d484ec2c18fcc3eccbdf30fd166f2072c3 Mon Sep 17 00:00:00 2001
+From: Paul Zander <negril.nx+gentoo@gmail.com>
+Date: Fri, 26 Jul 2024 00:11:49 +0200
+Subject: [PATCH 3/5] fix typo osnam -> osname
+
+Signed-off-by: Paul Zander <negril.nx+gentoo@gmail.com>
+--- a/CONFIG/src/probe_arch.c
++++ b/CONFIG/src/probe_arch.c
+@@ -198,7 +198,7 @@ int ConfirmPtrbits(enum OSTYPE OS0, enum ASMDIA asmd0, char *targ0,
+ /*
+ * Try OS-specific probe, compiling with -m64 (assumes gcc workalike)
+ */
+- i = 1 + strlen(frm) + strlen(osnam) + strlen(osnam[OS]) +
++ i = 1 + strlen(frm) + strlen(osname) + strlen(osnam[OS]) +
+ strlen(ASMNAM[asmd]) + strlen(flag) + strlen(targ) + strlen(find);
+ cmnd = malloc(i*sizeof(char));
+ assert(cmnd);
+--
+2.45.2
+
+
+From 550c8ff309c6896635bc86001af6dbecbf043d51 Mon Sep 17 00:00:00 2001
+From: Paul Zander <negril.nx+gentoo@gmail.com>
+Date: Fri, 26 Jul 2024 00:15:08 +0200
+Subject: [PATCH 4/5] use long long in format string
+
+Signed-off-by: Paul Zander <negril.nx+gentoo@gmail.com>
+--- a/bin/atlas_install.c
++++ b/bin/atlas_install.c
+@@ -278,7 +278,7 @@ long long GetFirstLongHex(char *ln)
+ {
+ if (isxdigit(ln[i]))
+ {
+- sscanf(ln+i, "%lx", &iret);
++ sscanf(ln+i, "%llx", &iret);
+ break;
+ }
+ }
+--
+2.45.2
+
+
+From 9a9d7f5f83ea6235ee8e40d49b93545bb3c5b7c2 Mon Sep 17 00:00:00 2001
+From: Paul Zander <negril.nx+gentoo@gmail.com>
+Date: Fri, 26 Jul 2024 00:16:03 +0200
+Subject: [PATCH 5/5] add missing string.h include
+
+Signed-off-by: Paul Zander <negril.nx+gentoo@gmail.com>
+--- a/bin/qrtst.c
++++ b/bin/qrtst.c
+@@ -41,6 +41,7 @@
+ #ifndef TimeF77
+ #include "clapack.h"
+ #endif
++#include <string.h>
+
+ #ifdef ATL_FULL_LAPACK
+ #include "atlas_C2Flapack.h"
+--
+2.45.2
+