reinit the tree, so we can have metadata

5 files changed, 268 insertions, 0 deletions

diff --git a/sci-libs/lapack-reference/files/eselect.lapack.reference b/sci-libs/lapack-reference/files/eselect.lapack.reference
new file mode 100644
index 000000000000..fe1a777b2dc2
--- /dev/null
+++ b/sci-libs/lapack-reference/files/eselect.lapack.reference
@@ -0,0 +1,4 @@
+lapack/reference/liblapack.so /usr/@LIBDIR@/liblapack.so
+lapack/reference/liblapack.so.0 /usr/@LIBDIR@/liblapack.so.0
+lapack/reference/liblapack.a /usr/@LIBDIR@/liblapack.a
+../lapack/reference/lapack.pc /usr/@LIBDIR@/pkgconfig/lapack.pc
diff --git a/sci-libs/lapack-reference/files/eselect.lapack.reference-r1 b/sci-libs/lapack-reference/files/eselect.lapack.reference-r1
new file mode 100644
index 000000000000..b6c4db325593
--- /dev/null
+++ b/sci-libs/lapack-reference/files/eselect.lapack.reference-r1
@@ -0,0 +1,4 @@
+lapack/reference/liblapack.so /usr/@LIBDIR@/liblapack.so
+lapack/reference/liblapack.so.3 /usr/@LIBDIR@/liblapack.so.3
+lapack/reference/liblapack.a /usr/@LIBDIR@/liblapack.a
+../lapack/reference/lapack.pc /usr/@LIBDIR@/pkgconfig/lapack.pc
diff --git a/sci-libs/lapack-reference/files/lapack-reference-3.2.1-parallel-make.patch b/sci-libs/lapack-reference/files/lapack-reference-3.2.1-parallel-make.patch
new file mode 100644
index 000000000000..72bc71ca2d95
--- /dev/null
+++ b/sci-libs/lapack-reference/files/lapack-reference-3.2.1-parallel-make.patch
@@ -0,0 +1,112 @@
+diff -Nauru lapack-3.2.1.old/TESTING/EIG/Makefile lapack-3.2.1/TESTING/EIG/Makefile
+--- lapack-3.2.1.old/TESTING/EIG/Makefile	2008-11-17 17:51:24.000000000 -0500
++++ lapack-3.2.1/TESTING/EIG/Makefile	2009-12-12 11:23:22.000000000 -0500
+@@ -126,25 +126,25 @@
+ double: ../xeigtstd
+ complex16: ../xeigtstz
+ 
+-../xeigtsts: $(SEIGTST) $(SCIGTST) $(AEIGTST) ; \
+-          $(LOADER) $(LOADOPTS) -o xeigtsts \
+-          $(SEIGTST) $(SCIGTST) $(AEIGTST) ../../$(TMGLIB) \
+-	  ../../$(LAPACKLIB) $(BLASLIB) && mv xeigtsts $@
+-
+-../xeigtstc: $(CEIGTST) $(SCIGTST) $(AEIGTST) ; \
+-          $(LOADER) $(LOADOPTS) -o xeigtstc \
+-          $(CEIGTST) $(SCIGTST) $(AEIGTST) ../../$(TMGLIB) \
+-	  ../../$(LAPACKLIB) $(BLASLIB) && mv xeigtstc $@
+-
+-../xeigtstd: $(DEIGTST) $(DZIGTST) $(AEIGTST) ; \
+-          $(LOADER) $(LOADOPTS) -o xeigtstd \
+-          $(DEIGTST) $(DZIGTST) $(AEIGTST) ../../$(TMGLIB) \
+-	  ../../$(LAPACKLIB) $(BLASLIB) && mv xeigtstd $@
+-
+-../xeigtstz: $(ZEIGTST) $(DZIGTST) $(AEIGTST) ; \
+-          $(LOADER) $(LOADOPTS) -o xeigtstz \
+-          $(ZEIGTST) $(DZIGTST) $(AEIGTST) ../../$(TMGLIB) \
+-	  ../../$(LAPACKLIB) $(BLASLIB) && mv xeigtstz $@
++../xeigtsts: $(SEIGTST) $(SCIGTST) $(AEIGTST)
++	$(LOADER) $(LOADOPTS) \
++	$(SEIGTST) $(SCIGTST) $(AEIGTST) ../../$(TMGLIB) \
++	../../$(LAPACKLIB) $(BLASLIB) -o ../xeigtsts 
++
++../xeigtstc: $(CEIGTST) $(SCIGTST) $(AEIGTST)
++	$(LOADER) $(LOADOPTS) \
++	$(CEIGTST) $(SCIGTST) $(AEIGTST) ../../$(TMGLIB) \
++	../../$(LAPACKLIB) $(BLASLIB) -o ../xeigtstc 
++
++../xeigtstd: $(DEIGTST) $(DZIGTST) $(AEIGTST)
++	$(LOADER) $(LOADOPTS) \
++	$(DEIGTST) $(DZIGTST) $(AEIGTST) ../../$(TMGLIB) \
++	../../$(LAPACKLIB) $(BLASLIB) -o ../xeigtstd
++
++../xeigtstz: $(ZEIGTST) $(DZIGTST) $(AEIGTST)
++	$(LOADER) $(LOADOPTS) \
++	$(ZEIGTST) $(DZIGTST) $(AEIGTST) ../../$(TMGLIB) \
++	../../$(LAPACKLIB) $(BLASLIB) -o ../xeigtstz
+ 
+ $(AEIGTST): $(FRC)
+ $(SCIGTST): $(FRC)
+@@ -169,4 +169,5 @@
+ zchkee.o: zchkee.f
+ 	$(FORTRAN) $(DRVOPTS) -c $< -o $@
+ 
+-.f.o : ; $(FORTRAN) $(OPTS) -c $< -o $@
++.f.o : 
++	$(FORTRAN) $(OPTS) -c $< -o $@
+diff -Nauru lapack-3.2.1.old/TESTING/LIN/Makefile lapack-3.2.1/TESTING/LIN/Makefile
+--- lapack-3.2.1.old/TESTING/LIN/Makefile	2009-02-10 12:23:05.000000000 -0500
++++ lapack-3.2.1/TESTING/LIN/Makefile	2009-12-12 07:22:41.000000000 -0500
+@@ -238,43 +238,43 @@
+ 
+ ../xlintsts : $(ALINTST) $(SLINTST) $(SCLNTST)
+ 	$(LOADER) $(LOADOPTS)  $(ALINTST) $(SCLNTST) $(SLINTST) \
+-        ../../$(TMGLIB) ../../$(LAPACKLIB) $(XBLASLIB)  $(BLASLIB) -o xlintsts && mv xlintsts $@
++        ../../$(TMGLIB) ../../$(LAPACKLIB) $(XBLASLIB)  $(BLASLIB) -o ../xlintsts 
+ 
+ ../xlintstc : $(ALINTST) $(CLINTST) $(SCLNTST)
+ 	$(LOADER) $(LOADOPTS)  $(ALINTST) $(SCLNTST) $(CLINTST) \
+-        ../../$(TMGLIB) ../../$(LAPACKLIB) $(XBLASLIB)  $(BLASLIB) -o xlintstc && mv xlintstc $@
++        ../../$(TMGLIB) ../../$(LAPACKLIB) $(XBLASLIB)  $(BLASLIB) -o ../xlintstc 
+  
+ ../xlintstd : $(ALINTST) $(DLINTST) $(DZLNTST)
+ 	$(LOADER) $(LOADOPTS) $^ \
+-        ../../$(TMGLIB) ../../$(LAPACKLIB) $(XBLASLIB) $(BLASLIB) -o xlintstd && mv xlintstd $@
++        ../../$(TMGLIB) ../../$(LAPACKLIB) $(XBLASLIB) $(BLASLIB) -o ../xlintstd 
+  
+ ../xlintstz : $(ALINTST) $(ZLINTST) $(DZLNTST)
+ 	$(LOADER) $(LOADOPTS)  $(ALINTST) $(DZLNTST) $(ZLINTST) \
+-        ../../$(TMGLIB) ../../$(LAPACKLIB) $(XBLASLIB)  $(BLASLIB) -o xlintstz && mv xlintstz $@
++        ../../$(TMGLIB) ../../$(LAPACKLIB) $(XBLASLIB)  $(BLASLIB) -o ../xlintstz 
+  
+ ../xlintstds : $(DSLINTST)
+ 	$(LOADER) $(LOADOPTS)  $(DSLINTST) \
+-        ../../$(TMGLIB) ../../$(LAPACKLIB) $(BLASLIB) -o xlintstds && mv xlintstds $@
++        ../../$(TMGLIB) ../../$(LAPACKLIB) $(BLASLIB) -o ../xlintstds 
+  
+ ../xlintstzc : $(ZCLINTST)
+ 	$(LOADER) $(LOADOPTS)  $(ZCLINTST) \
+-        ../../$(TMGLIB) ../../$(LAPACKLIB) $(BLASLIB) -o xlintstzc && mv xlintstzc $@
++        ../../$(TMGLIB) ../../$(LAPACKLIB) $(BLASLIB) -o ../xlintstzc 
+  
+ ../xlintstrfs : $(SLINTSTRFP)
+ 	$(LOADER) $(LOADOPTS)  $(SLINTSTRFP) \
+-        ../../$(TMGLIB) ../../$(LAPACKLIB) $(BLASLIB) -o xlintstrfs && mv xlintstrfs $@
++        ../../$(TMGLIB) ../../$(LAPACKLIB) $(BLASLIB) -o ../xlintstrfs 
+  
+ ../xlintstrfd : $(DLINTSTRFP)
+ 	$(LOADER) $(LOADOPTS)  $(DLINTSTRFP) \
+-        ../../$(TMGLIB) ../../$(LAPACKLIB) $(BLASLIB) -o xlintstrfd && mv xlintstrfd $@
++        ../../$(TMGLIB) ../../$(LAPACKLIB) $(BLASLIB) -o ../xlintstrfd
+  
+ ../xlintstrfc : $(CLINTSTRFP)
+ 	$(LOADER) $(LOADOPTS)  $(CLINTSTRFP) \
+-        ../../$(TMGLIB) ../../$(LAPACKLIB) $(BLASLIB) -o xlintstrfc && mv xlintstrfc $@
++        ../../$(TMGLIB) ../../$(LAPACKLIB) $(BLASLIB) -o ../xlintstrfc 
+  
+ ../xlintstrfz : $(ZLINTSTRFP)
+ 	$(LOADER) $(LOADOPTS)  $(ZLINTSTRFP) \
+-        ../../$(TMGLIB) ../../$(LAPACKLIB) $(BLASLIB) -o xlintstrfz && mv xlintstrfz $@
++        ../../$(TMGLIB) ../../$(LAPACKLIB) $(BLASLIB) -o ../xlintstrfz
+  
+ $(ALINTST): $(FRC)
+ $(SCLNTST): $(FRC)
diff --git a/sci-libs/lapack-reference/files/lapack-reference-3.6.0-fix-build-system.patch b/sci-libs/lapack-reference/files/lapack-reference-3.6.0-fix-build-system.patch
new file mode 100644
index 000000000000..8661709d369b
--- /dev/null
+++ b/sci-libs/lapack-reference/files/lapack-reference-3.6.0-fix-build-system.patch
@@ -0,0 +1,92 @@
+--- lapack-3.6.0/BLAS/blas.pc.in
++++ lapack-3.6.0/BLAS/blas.pc.in
+@@ -1,5 +1,7 @@
+-prefix=@prefix@
+-libdir=@libdir@
++prefix=@CMAKE_INSTALL_PREFIX@
++exec_prefix=${prefix}
++libdir=${exec_prefix}/@CMAKE_INSTALL_LIBDIR@
++includedir=${prefix}/include
+ 
+ Name: blas
+ Description: Basic Linear Algebra Subprograms F77 reference implementations
+--- lapack-3.6.0/BLAS/CMakeLists.txt
++++ lapack-3.6.0/BLAS/CMakeLists.txt
+@@ -2,7 +2,7 @@
+ if(BUILD_TESTING)
+ add_subdirectory(TESTING)
+ endif(BUILD_TESTING)
+-configure_file(${CMAKE_CURRENT_SOURCE_DIR}/blas.pc.in ${CMAKE_CURRENT_BINARY_DIR}/blas.pc)
++configure_file(${CMAKE_CURRENT_SOURCE_DIR}/blas.pc.in ${CMAKE_CURRENT_BINARY_DIR}/blas.pc @ONLY)
+ install(FILES
+   ${CMAKE_CURRENT_BINARY_DIR}/blas.pc
+   DESTINATION ${PKG_CONFIG_DIR}
+--- lapack-3.6.0/CBLAS/cblas.pc.in
++++ lapack-3.6.0/CBLAS/cblas.pc.in
+@@ -1,5 +1,7 @@
+-prefix=@prefix@
+-libdir=@libdir@
++prefix=@CMAKE_INSTALL_PREFIX@
++exec_prefix=${prefix}
++libdir=${exec_prefix}/@CMAKE_INSTALL_LIBDIR@
++includedir=${prefix}/include
+ 
+ Name: lapacke
+ Description: C Standard Interface to BLAS Linear Algebra PACKage
+--- lapack-3.6.0/CBLAS/CMakeLists.txt
++++ lapack-3.6.0/CBLAS/CMakeLists.txt
+@@ -71,7 +71,7 @@
+   ${LAPACK_BINARY_DIR}/cblas-config.cmake @ONLY)
+ 
+ 
+-configure_file(${CMAKE_CURRENT_SOURCE_DIR}/cblas.pc.in ${CMAKE_CURRENT_BINARY_DIR}/cblas.pc)
++configure_file(${CMAKE_CURRENT_SOURCE_DIR}/cblas.pc.in ${CMAKE_CURRENT_BINARY_DIR}/cblas.pc @ONLY)
+   install(FILES
+   ${CMAKE_CURRENT_BINARY_DIR}/cblas.pc
+   DESTINATION ${PKG_CONFIG_DIR}
+--- lapack-3.6.0/CMakeLists.txt
++++ lapack-3.6.0/CMakeLists.txt
+@@ -333,7 +333,7 @@
+   ${LAPACK_BINARY_DIR}/lapack-config.cmake @ONLY)
+ 
+ 
+-configure_file(${CMAKE_CURRENT_SOURCE_DIR}/lapack.pc.in ${CMAKE_CURRENT_BINARY_DIR}/lapack.pc)
++configure_file(${CMAKE_CURRENT_SOURCE_DIR}/lapack.pc.in ${CMAKE_CURRENT_BINARY_DIR}/lapack.pc @ONLY)
+   install(FILES
+   ${CMAKE_CURRENT_BINARY_DIR}/lapack.pc
+   DESTINATION ${PKG_CONFIG_DIR}
+--- lapack-3.6.0/LAPACKE/CMakeLists.txt
++++ lapack-3.6.0/LAPACKE/CMakeLists.txt
+@@ -65,7 +65,7 @@
+ endif(BUILD_TESTING)
+ 
+ 
+-configure_file(${CMAKE_CURRENT_SOURCE_DIR}/lapacke.pc.in ${CMAKE_CURRENT_BINARY_DIR}/lapacke.pc)
++configure_file(${CMAKE_CURRENT_SOURCE_DIR}/lapacke.pc.in ${CMAKE_CURRENT_BINARY_DIR}/lapacke.pc @ONLY)
+  install(FILES
+   ${CMAKE_CURRENT_BINARY_DIR}/lapacke.pc
+   DESTINATION ${PKG_CONFIG_DIR}
+--- lapack-3.6.0/LAPACKE/lapacke.pc.in
++++ lapack-3.6.0/LAPACKE/lapacke.pc.in
+@@ -1,5 +1,7 @@
+-prefix=@prefix@
+-libdir=@libdir@
++prefix=@CMAKE_INSTALL_PREFIX@
++exec_prefix=${prefix}
++libdir=${exec_prefix}/@CMAKE_INSTALL_LIBDIR@
++includedir=${prefix}/include
+ 
+ Name: lapacke
+ Description: C Standard Interface to LAPACK Linear Algebra PACKage
+--- lapack-3.6.0/lapack.pc.in
++++ lapack-3.6.0/lapack.pc.in
+@@ -1,5 +1,7 @@
+-prefix=@prefix@
+-libdir=@libdir@
++prefix=@CMAKE_INSTALL_PREFIX@
++exec_prefix=${prefix}
++libdir=${exec_prefix}/@CMAKE_INSTALL_LIBDIR@
++includedir=${prefix}/include
+ 
+ Name: lapack
+ Description: FORTRAN reference implementation of LAPACK Linear Algebra PACKage
diff --git a/sci-libs/lapack-reference/files/lapack-reference-3.7.0-fix-build-system.patch b/sci-libs/lapack-reference/files/lapack-reference-3.7.0-fix-build-system.patch
new file mode 100644
index 000000000000..70f7cb0ee926
--- /dev/null
+++ b/sci-libs/lapack-reference/files/lapack-reference-3.7.0-fix-build-system.patch
@@ -0,0 +1,56 @@
+diff --git a/BLAS/blas.pc.in b/BLAS/blas.pc.in
+index 7fd6f1e..e52f3ad 100644
+--- a/BLAS/blas.pc.in
++++ b/BLAS/blas.pc.in
+@@ -1,5 +1,7 @@
+-prefix=@prefix@
+-libdir=@libdir@
++prefix=@CMAKE_INSTALL_PREFIX@
++exec_prefix=${prefix}
++libdir=${exec_prefix}/@CMAKE_INSTALL_LIBDIR@
++includedir=${prefix}/include
+ 
+ Name: BLAS
+ Description: FORTRAN reference implementation of BLAS Basic Linear Algebra Subprograms
+diff --git a/CBLAS/cblas.pc.in b/CBLAS/cblas.pc.in
+index 4a938fe..311aed9 100644
+--- a/CBLAS/cblas.pc.in
++++ b/CBLAS/cblas.pc.in
+@@ -1,5 +1,7 @@
+-prefix=@prefix@
+-libdir=@libdir@
++prefix=@CMAKE_INSTALL_PREFIX@
++exec_prefix=${prefix}
++libdir=${exec_prefix}/@CMAKE_INSTALL_LIBDIR@
++includedir=${prefix}/include
+ 
+ Name: CBLAS
+ Description: C Standard Interface to BLAS Basic Linear Algebra Subprograms
+diff --git a/LAPACKE/lapacke.pc.in b/LAPACKE/lapacke.pc.in
+index 028f8da..dc092b1 100644
+--- a/LAPACKE/lapacke.pc.in
++++ b/LAPACKE/lapacke.pc.in
+@@ -1,5 +1,7 @@
+-prefix=@prefix@
+-libdir=@libdir@
++prefix=@CMAKE_INSTALL_PREFIX@
++exec_prefix=${prefix}
++libdir=${exec_prefix}/@CMAKE_INSTALL_LIBDIR@
++includedir=${prefix}/include
+ 
+ Name: LAPACKE
+ Description: C Standard Interface to LAPACK Linear Algebra PACKage
+diff --git a/lapack.pc.in b/lapack.pc.in
+index 878efc2..2cca4c2 100644
+--- a/lapack.pc.in
++++ b/lapack.pc.in
+@@ -1,5 +1,7 @@
+-prefix=@prefix@
+-libdir=@libdir@
++prefix=@CMAKE_INSTALL_PREFIX@
++exec_prefix=${prefix}
++libdir=${exec_prefix}/@CMAKE_INSTALL_LIBDIR@
++includedir=${prefix}/include
+ 
+ Name: LAPACK
+ Description: FORTRAN reference implementation of LAPACK Linear Algebra PACKage