diff options
author | V3n3RiX <venerix@redcorelinux.org> | 2017-10-09 18:53:29 +0100 |
---|---|---|
committer | V3n3RiX <venerix@redcorelinux.org> | 2017-10-09 18:53:29 +0100 |
commit | 4f2d7949f03e1c198bc888f2d05f421d35c57e21 (patch) | |
tree | ba5f07bf3f9d22d82e54a462313f5d244036c768 /sci-libs/superlu |
reinit the tree, so we can have metadata
Diffstat (limited to 'sci-libs/superlu')
-rw-r--r-- | sci-libs/superlu/Manifest | 11 | ||||
-rw-r--r-- | sci-libs/superlu/files/superlu-4.3-autotools.patch | 584 | ||||
-rw-r--r-- | sci-libs/superlu/files/superlu-4.3-format-security.patch | 16 | ||||
-rw-r--r-- | sci-libs/superlu/files/superlu-5.2.1-no-implicits.patch | 153 | ||||
-rw-r--r-- | sci-libs/superlu/files/superlu-5.2.1-pkgconfig.patch | 29 | ||||
-rw-r--r-- | sci-libs/superlu/metadata.xml | 28 | ||||
-rw-r--r-- | sci-libs/superlu/superlu-4.3-r1.ebuild | 73 | ||||
-rw-r--r-- | sci-libs/superlu/superlu-5.2.1-r1.ebuild | 68 |
8 files changed, 962 insertions, 0 deletions
diff --git a/sci-libs/superlu/Manifest b/sci-libs/superlu/Manifest new file mode 100644 index 000000000000..1f17b924827a --- /dev/null +++ b/sci-libs/superlu/Manifest @@ -0,0 +1,11 @@ +AUX superlu-4.3-autotools.patch 18676 SHA256 6dea0fca12629825ec729fafa488ff2025cd950e93b768d5636fa4d05c760291 SHA512 62f868126af7acc3658bdff6eda8839d06dd14b5195d23a2b7bbbe1008e9258875ac3c9bc4ed40f4ac58443ac4aeef786499b02ff45f2adb304160f3b25b0bf3 WHIRLPOOL 68082a67aec45d6a94daa15d90727eebf2e2f67f3df85b7f6f08a253179c71d21b364822a15f1d9e2a107d56c1157ce995222ce42b5013d9b109bfa36adf8284 +AUX superlu-4.3-format-security.patch 312 SHA256 bd877b50b244617f5de8a7cd17e8743b00a79dffbfd043994cffca9c0e7f6730 SHA512 86072c671b946a73e8857fcf60499c589c0de8ca2433c2310701a2249eb32968e7ab83e638be1fcee3358d3b1432cba988cf11644962dbf09045b4907b9ebf6a WHIRLPOOL 924eb83342f1b99a01c668981ea38045baeb95252281dbcfc4cda9fbeabb1fcfd5dfdd64e4a9037ac5ea005245a393621d73d682ae47ae3ef7838ddec577377b +AUX superlu-5.2.1-no-implicits.patch 4950 SHA256 c91906f2229f2c81944244612a2632b4e18b8196050da3a494d57ad2e7892495 SHA512 9bcf34847baddd7d330638d9115359cd2bd6d7630cc24a8fd9432b83485e6b2f1bb2500971f65b1fe26ec2ca70f7483105e1a02ba4083763ca79794dabe8551a WHIRLPOOL 501967ab12e8693cafa6709d3a2e871803149b93990dc146b205c46c82af311ed9bbbbb18b20e1f36e3deb2fdf85415c597bb168817c67dbda1a95b8a0918cc8 +AUX superlu-5.2.1-pkgconfig.patch 1013 SHA256 b69ca42c7c89335aaefc96677cf2b2fe6d8a5f1b852e0253e8bbf58e6eaedcb5 SHA512 f22dcbaaa6857008b75b8c6481b219b11c09ebcfe2dffe0a4d4f0cba6392f18fc9a5a870b2a8efa7c31df321b78186cbde7cf8739da59dc089fa3b6ae836bf36 WHIRLPOOL 158126f7dab0a599ec4b0c9d432f3754793c1024b076e9a301dc5d413e83512a3837d2278ee3c2d8ab5db5a6f8411087664adf45dc55a9a8516b9219873ca35e +DIST superlu_4.3.tar.gz 2876631 SHA256 7aa08e75fba6b242aef20f10a31d7e052ad74ad29384e68d41a61d1d642f18da SHA512 5c13da47b79160be14719f62ccdf5d59142a172e25a988fa340eaeb001a64d7f45ba39e675cb7aa3571bec52cb3a7cda0bb7a708c9608184ba6251edb7990e8c WHIRLPOOL 034d924a736d101497df13f4f69d96b9e375c78a207df1615a7d22b639e24d755e9cb16e952c57ee8eece8d4ea7aa9f9d0576aaaee19ae0b0898698973864c15 +DIST superlu_5.2.1.tar.gz 2560875 SHA256 28fb66d6107ee66248d5cf508c79de03d0621852a0ddeba7301801d3d859f463 SHA512 30538b4c2809294b8f34646bce6445944f21a1dffaf3ec0a0f29a55d5261caa56e4279d7722bb95cc9d89450d36ded969617edc82ecce7d0f1dfb24040d80d07 WHIRLPOOL 25d08498b874ac2ee806759cb381b7cfc563a213da9793630031957bb9fe63983d8671f502b699b72615ffba9dd6a23ab33010bda67aba9663cba302414eeb8b +EBUILD superlu-4.3-r1.ebuild 1625 SHA256 e859e71b774626ce7db21e9cd9559399ade127494f73dad62928740fae7079a6 SHA512 1f43902eb51afc5b238cda59885b85ad33cd310c7dd70fbc33b67222b39357d277b8f54b46c636101f232cc51b6ed2fb6456445cee35714e41882e0a9ee48909 WHIRLPOOL 436bf31efbe893793de0bdf3f352b10f26c9338904433043385a2a3fe3c1df52f84c184e94bbabb403062687f0ddd0fe93640516d327ee1b4f7d4b97b1967e46 +EBUILD superlu-5.2.1-r1.ebuild 1459 SHA256 29b9b0e15e261fb3ea078497d6ad69c3ae3ae47b75625f6ce3b969dfc9c0c543 SHA512 586d09b75c5f1517f035cd1979e3b47d8f26c372216437a09b3274494d7e04578c27426c8da522089fd1f7a72f5c8a952d48e028cbb725d818149e12f47f3ea7 WHIRLPOOL c0fac7cc95d6b82f4d189b6f0e9b13d2e5666d36acb5f5520618f1e9b08554fc7623e2a39022b603abf93884f683201f44d26b160de5e2baa3590e9612527b6c +MISC ChangeLog 2851 SHA256 44f359dce2a3039299fa5fa9ff3e352c0326c7fbfadc51f102d6e2fb2dbc036c SHA512 ab4e4aea98bb65ad1df730d5315c27e254116b66818483fb79bdd92b9b6c7eb6fbb8223383702ff52ad20795204b5a840beb6c8a81db4ba58ed6b57b2f574366 WHIRLPOOL a411229a34b00ec6651444104412249169af9910b384e8abebadd0f1780fd6f255fbb426ae729be185ce13fa00a412f4b2e00ed192884b6841a47dbb92036413 +MISC ChangeLog-2015 5075 SHA256 20bd2312ceed248ef7ee7261d582962c9f4d13cde9f5aa59606a7e74f9243bbd SHA512 790a27620fb9efdef30073187a16c0bdbac1fcb745b9f43bb07836650a115892a70591cfb7625944fd7718212b94f025f59003dabd1460ad64086d3cb72f3d24 WHIRLPOOL 564f41836747b505a6016dddc5bab39af863279c4e761cda0034f7b58ffa00771458aa5b5966ebed54e89061cce04d24c3987b221e69192608df9079b12ae405 +MISC metadata.xml 1404 SHA256 51261bee09cffe52539937c7e23b1f7d6ee87798659ad00d25ca55779299c923 SHA512 8b758572ed599bdf43898050e265ce8ea82c4952af97471c09ee0013e56cf6928df3f3a436516c4fae7a38a13bba4a3437e130f294f942eaaae05125fa5fbdea WHIRLPOOL 71178833c9395ad75ab5fec4c3ba1c93373cdaaa07ba8421dfd2fc63a009c4a81ccf2716205797dfafb34ed3d47f284b0f2d546bf242a4c57253419ae8da2a2b diff --git a/sci-libs/superlu/files/superlu-4.3-autotools.patch b/sci-libs/superlu/files/superlu-4.3-autotools.patch new file mode 100644 index 000000000000..c5aae0159344 --- /dev/null +++ b/sci-libs/superlu/files/superlu-4.3-autotools.patch @@ -0,0 +1,584 @@ + EXAMPLE/Makefile | 68 +++++++++--------- + FORTRAN/Makefile | 14 ++-- + Makefile.am | 4 + + SRC/Makefile.am | 110 +++++++++++++++++++++++++++++ + ax_blas.m4 | 201 ++++++++++++++++++++++++++++++++++++++++++++++++++++++ + configure.ac | 16 ++++ + superlu.pc.in | 13 ++++ + 7 files changed, 385 insertions(+), 41 deletions(-) + +diff --git a/EXAMPLE/Makefile b/EXAMPLE/Makefile +index c286ded..37950dc 100644 +--- a/EXAMPLE/Makefile ++++ b/EXAMPLE/Makefile +@@ -1,4 +1,3 @@ +-include ../make.inc + + ####################################################################### + # This makefile creates the example programs for the linear equation +@@ -32,7 +31,9 @@ include ../make.inc + # + ####################################################################### + +-HEADER = ../SRC ++HEADER = $(shell pkg-config --cflags superlu) ++LIBS = $(shell pkg-config --libs superlu) ++CDEFS = -DAdd_ + + SLINEXM = slinsol.o + SLINEXM1 = slinsol1.o +@@ -67,7 +68,6 @@ ZLINXEXM2 = zlinsolx2.o + ZITSOL = zitersol.o zfgmr.o + ZITSOL1 = zitersol1.o zfgmr.o + +- + all: single double complex complex16 + + single: slinsol slinsol1 slinsolx slinsolx1 slinsolx2 sitersol sitersol1 +@@ -77,97 +77,97 @@ complex: clinsol clinsol1 clinsolx clinsolx1 clinsolx2 citersol citersol1 + complex16: zlinsol zlinsol1 zlinsolx zlinsolx1 zlinsolx2 zitersol zitersol1 + + slinsol: $(SLINEXM) $(SUPERLULIB) +- $(LOADER) $(LOADOPTS) $(SLINEXM) $(LIBS) -lm -o $@ ++ $(LD) $(LDFLAGS) $(SLINEXM) $(LIBS) -o $@ + + slinsol1: $(SLINEXM1) $(SUPERLULIB) +- $(LOADER) $(LOADOPTS) $(SLINEXM1) $(LIBS) -lm -o $@ ++ $(LD) $(LDFLAGS) $(SLINEXM1) $(LIBS) -o $@ + + slinsolx: $(SLINXEXM) $(SUPERLULIB) +- $(LOADER) $(LOADOPTS) $(SLINXEXM) $(LIBS) -lm -o $@ ++ $(LD) $(LDFLAGS) $(SLINXEXM) $(LIBS) -o $@ + + slinsolx1: $(SLINXEXM1) $(SUPERLULIB) +- $(LOADER) $(LOADOPTS) $(SLINXEXM1) $(LIBS) -lm -o $@ ++ $(LD) $(LDFLAGS) $(SLINXEXM1) $(LIBS) -o $@ + + slinsolx2: $(SLINXEXM2) $(SUPERLULIB) +- $(LOADER) $(LOADOPTS) $(SLINXEXM2) $(LIBS) -lm -o $@ ++ $(LD) $(LDFLAGS) $(SLINXEXM2) $(LIBS) -o $@ + + sitersol: $(SITSOL) $(SUPERLULIB) +- $(LOADER) $(LOADOPTS) $(SITSOL) $(LIBS) -lm -o $@ ++ $(LD) $(LDFLAGS) $(SITSOL) $(LIBS) -o $@ + + sitersol1: $(SITSOL1) $(SUPERLULIB) +- $(LOADER) $(LOADOPTS) $(SITSOL1) $(LIBS) -lm -o $@ ++ $(LD) $(LDFLAGS) $(SITSOL1) $(LIBS) -o $@ + + dlinsol: $(DLINEXM) $(SUPERLULIB) +- $(LOADER) $(LOADOPTS) $(DLINEXM) $(LIBS) -lm -o $@ ++ $(LD) $(LDFLAGS) $(DLINEXM) $(LIBS) -o $@ + + dlinsol1: $(DLINEXM1) $(SUPERLULIB) +- $(LOADER) $(LOADOPTS) $(DLINEXM1) $(LIBS) -lm -o $@ ++ $(LD) $(LDFLAGS) $(DLINEXM1) $(LIBS) -o $@ + + dlinsolx: $(DLINXEXM) $(SUPERLULIB) +- $(LOADER) $(LOADOPTS) $(DLINXEXM) $(LIBS) -lm -o $@ ++ $(LD) $(LDFLAGS) $(DLINXEXM) $(LIBS) -o $@ + + dlinsolx1: $(DLINXEXM1) $(SUPERLULIB) +- $(LOADER) $(LOADOPTS) $(DLINXEXM1) $(LIBS) -lm -o $@ ++ $(LD) $(LDFLAGS) $(DLINXEXM1) $(LIBS) -o $@ + + dlinsolx2: $(DLINXEXM2) $(SUPERLULIB) +- $(LOADER) $(LOADOPTS) $(DLINXEXM2) $(LIBS) -lm -o $@ ++ $(LD) $(LDFLAGS) $(DLINXEXM2) $(LIBS) -o $@ + + superlu: $(SUPERLUEXM) $(SUPERLULIB) +- $(LOADER) $(LOADOPTS) $(SUPERLUEXM) $(LIBS) -lm -o $@ ++ $(LD) $(LDFLAGS) $(SUPERLUEXM) $(LIBS) -o $@ + + ditersol: $(DITSOL) $(SUPERLULIB) +- $(LOADER) $(LOADOPTS) $(DITSOL) $(LIBS) -lm -o $@ ++ $(LD) $(LDFLAGS) $(DITSOL) $(LIBS) -o $@ + + ditersol1: $(DITSOL1) $(SUPERLULIB) +- $(LOADER) $(LOADOPTS) $(DITSOL1) $(LIBS) -lm -o $@ ++ $(LD) $(LDFLAGS) $(DITSOL1) $(LIBS) -o $@ + + clinsol: $(CLINEXM) $(SUPERLULIB) +- $(LOADER) $(LOADOPTS) $(CLINEXM) $(LIBS) -lm -o $@ ++ $(LD) $(LDFLAGS) $(CLINEXM) $(LIBS) -o $@ + + clinsol1: $(CLINEXM1) $(SUPERLULIB) +- $(LOADER) $(LOADOPTS) $(CLINEXM1) $(LIBS) -lm -o $@ ++ $(LD) $(LDFLAGS) $(CLINEXM1) $(LIBS) -o $@ + + clinsolx: $(CLINXEXM) $(SUPERLULIB) +- $(LOADER) $(LOADOPTS) $(CLINXEXM) $(LIBS) -lm -o $@ ++ $(LD) $(LDFLAGS) $(CLINXEXM) $(LIBS) -o $@ + + clinsolx1: $(CLINXEXM1) $(SUPERLULIB) +- $(LOADER) $(LOADOPTS) $(CLINXEXM1) $(LIBS) -lm -o $@ ++ $(LD) $(LDFLAGS) $(CLINXEXM1) $(LIBS) -o $@ + + clinsolx2: $(CLINXEXM2) $(SUPERLULIB) +- $(LOADER) $(LOADOPTS) $(CLINXEXM2) $(LIBS) -lm -o $@ ++ $(LD) $(LDFLAGS) $(CLINXEXM2) $(LIBS) -o $@ + + citersol: $(CITSOL) $(SUPERLULIB) +- $(LOADER) $(LOADOPTS) $(CITSOL) $(LIBS) -lm -o $@ ++ $(LD) $(LDFLAGS) $(CITSOL) $(LIBS) -o $@ + + citersol1: $(CITSOL1) $(SUPERLULIB) +- $(LOADER) $(LOADOPTS) $(CITSOL1) $(LIBS) -lm -o $@ ++ $(LD) $(LDFLAGS) $(CITSOL1) $(LIBS) -o $@ + + zlinsol: $(ZLINEXM) $(SUPERLULIB) +- $(LOADER) $(LOADOPTS) $(ZLINEXM) $(LIBS) -lm -o $@ ++ $(LD) $(LDFLAGS) $(ZLINEXM) $(LIBS) -o $@ + + zlinsol1: $(ZLINEXM1) $(SUPERLULIB) +- $(LOADER) $(LOADOPTS) $(ZLINEXM1) $(LIBS) -lm -o $@ ++ $(LD) $(LDFLAGS) $(ZLINEXM1) $(LIBS) -o $@ + + zlinsolx: $(ZLINXEXM) $(SUPERLULIB) +- $(LOADER) $(LOADOPTS) $(ZLINXEXM) $(LIBS) -lm -o $@ ++ $(LD) $(LDFLAGS) $(ZLINXEXM) $(LIBS) -o $@ + + zlinsolx1: $(ZLINXEXM1) $(SUPERLULIB) +- $(LOADER) $(LOADOPTS) $(ZLINXEXM1) $(LIBS) -lm -o $@ ++ $(LD) $(LDFLAGS) $(ZLINXEXM1) $(LIBS) -o $@ + + zlinsolx2: $(ZLINXEXM2) $(SUPERLULIB) +- $(LOADER) $(LOADOPTS) $(ZLINXEXM2) $(LIBS) -lm -o $@ ++ $(LD) $(LDFLAGS) $(ZLINXEXM2) $(LIBS) -o $@ + + zitersol: $(ZITSOL) $(SUPERLULIB) +- $(LOADER) $(LOADOPTS) $(ZITSOL) $(LIBS) -lm -o $@ ++ $(LD) $(LDFLAGS) $(ZITSOL) $(LIBS) -o $@ + + zitersol1: $(ZITSOL1) $(SUPERLULIB) +- $(LOADER) $(LOADOPTS) $(ZITSOL1) $(LIBS) -lm -o $@ ++ $(LD) $(LDFLAG) $(ZITSOL1) $(LIBS) -o $@ + + .c.o: +- $(CC) $(CFLAGS) $(CDEFS) -I$(HEADER) -c $< $(VERBOSE) ++ $(CC) $(CFLAGS) $(CDEFS) $(HEADER) -c $< $(VERBOSE) + + .f.o: +- $(FORTRAN) $(FFLAGS) -c $< $(VERBOSE) ++ $(FC) $(FFLAGS) -c $< $(VERBOSE) + + clean: + rm -f *.o *linsol *linsol1 *linsolx *linsolx1 *linsolx2 \ +diff --git a/FORTRAN/Makefile b/FORTRAN/Makefile +index 23671a7..54da751 100644 +--- a/FORTRAN/Makefile ++++ b/FORTRAN/Makefile +@@ -1,12 +1,12 @@ +-include ../make.inc ++#include ../make.inc + + ####################################################################### + # This makefile creates the Fortran example interface to use the + # C routines in SuperLU. + ####################################################################### + +-HEADER = ../SRC +-LIBS = $(SUPERLULIB) $(BLASLIB) -lm ++HEADER = $(shell pkg-config --cflags superlu) ++LIBS = $(shell pkg-config --libs superlu) + + # double real + F77EXM = f77_main.o hbcode1.o c_fortran_dgssv.o +@@ -17,19 +17,19 @@ ZF77EXM = z_f77_main.o zhbcode1.o c_fortran_zgssv.o + all: f77exm zf77exm + + f77exm: $(F77EXM) $(SUPERLULIB) +- $(FORTRAN) $(LOADOPTS) $(F77EXM) $(LIBS) -o $@ ++ $(FC) $(LDFLAGS) $(F77EXM) $(LIBS) -o $@ + + zf77exm: $(ZF77EXM) $(SUPERLULIB) + $(FORTRAN) $(LOADOPTS) $(ZF77EXM) $(LIBS) -o $@ + + c_fortran_zgssv.o: c_fortran_zgssv.c +- $(CC) $(CFLAGS) $(CDEFS) -I$(HEADER) -c $< $(VERBOSE) ++ $(CC) $(CFLAGS) $(CDEFS) $(HEADER) -c $< $(VERBOSE) + + .c.o: +- $(CC) $(CFLAGS) $(CDEFS) -I$(HEADER) -c $< $(VERBOSE) ++ $(CC) $(CFLAGS) $(CDEFS) $(HEADER) -c $< $(VERBOSE) + + .f.o: +- $(FORTRAN) $(FFLAGS) -c $< $(VERBOSE) ++ $(FC) $(FFLAGS) -c $< $(VERBOSE) + + clean: + rm -f *.o f77exm zf77exm +diff --git a/Makefile.am b/Makefile.am +new file mode 100644 +index 0000000..7e51046 +--- /dev/null ++++ b/Makefile.am +@@ -0,0 +1,4 @@ ++SUBDIRS = SRC ++ ++pkgconfigdir = $(libdir)/pkgconfig ++pkgconfig_DATA = superlu.pc +diff --git a/SRC/Makefile.am b/SRC/Makefile.am +new file mode 100644 +index 0000000..748e5e9 +--- /dev/null ++++ b/SRC/Makefile.am +@@ -0,0 +1,110 @@ ++AM_CPPFLAGS = -DAdd_ ++ ++### headers ++noinst_HEADERS = \ ++ colamd.h \ ++ html_mainpage.h ++ ++src_includedir = $(includedir)/superlu ++src_include_HEADERS = \ ++ slu_cdefs.h \ ++ slu_ddefs.h \ ++ slu_sdefs.h \ ++ slu_zdefs.h \ ++ slu_Cnames.h \ ++ slu_dcomplex.h \ ++ slu_scomplex.h \ ++ slu_util.h \ ++ superlu_enum_consts.h \ ++ supermatrix.h ++ ++### LAPACK ++LAAUX = lsame.c xerbla.c ++SLASRC = slacon.c ++DLASRC = dlacon.c ++CLASRC = clacon.c scsum1.c icmax1.c ++ZLASRC = zlacon.c dzsum1.c izmax1.c ++ ++ ++################################## ++# Do not optimize these routines # ++################################## ++CFLAGS_SAV=@CFLAGS@ ++CFLAGS= ++noinst_LTLIBRARIES = libnoopt.la ++libnoopt_la_SOURCES = slamch.c dlamch.c superlu_timer.c ++libnoopt_la_CFLAGS = -O0 ++ ++### SuperLU ++ALLAUX = util.c memory.c get_perm_c.c mmd.c \ ++ sp_coletree.c sp_preorder.c sp_ienv.c relax_snode.c \ ++ heap_relax_snode.c colamd.c \ ++ ilu_relax_snode.c ilu_heap_relax_snode.c mark_relax.c \ ++ mc64ad.f qselect.f ++ ++SLUSRC = \ ++ sgssv.c sgssvx.c \ ++ ssp_blas2.c ssp_blas3.c sgscon.c \ ++ slangs.c sgsequ.c slaqgs.c spivotgrowth.c \ ++ sgsrfs.c sgstrf.c sgstrs.c scopy_to_ucol.c \ ++ ssnode_dfs.c ssnode_bmod.c \ ++ spanel_dfs.c spanel_bmod.c sreadhb.c \ ++ scolumn_dfs.c scolumn_bmod.c spivotL.c spruneL.c \ ++ smemory.c sutil.c smyblas2.c \ ++ sgsisx.c sgsitrf.c sldperm.c \ ++ ilu_sdrop_row.c ilu_ssnode_dfs.c \ ++ ilu_scolumn_dfs.c ilu_spanel_dfs.c ilu_scopy_to_ucol.c \ ++ ilu_spivotL.c sdiagonal.c ++ ++DLUSRC = \ ++ dgssv.c dgssvx.c \ ++ dsp_blas2.c dsp_blas3.c dgscon.c \ ++ dlangs.c dgsequ.c dlaqgs.c dpivotgrowth.c \ ++ dgsrfs.c dgstrf.c dgstrs.c dcopy_to_ucol.c \ ++ dsnode_dfs.c dsnode_bmod.c \ ++ dpanel_dfs.c dpanel_bmod.c dreadhb.c \ ++ dcolumn_dfs.c dcolumn_bmod.c dpivotL.c dpruneL.c \ ++ dmemory.c dutil.c dmyblas2.c \ ++ dgsisx.c dgsitrf.c \ ++ dldperm.c \ ++ ilu_ddrop_row.c ilu_dsnode_dfs.c \ ++ ilu_dcolumn_dfs.c ilu_dpanel_dfs.c ilu_dcopy_to_ucol.c \ ++ ilu_dpivotL.c ddiagonal.c ++ ++CLUSRC = \ ++ scomplex.c cgssv.c cgssvx.c csp_blas2.c csp_blas3.c cgscon.c \ ++ clangs.c cgsequ.c claqgs.c cpivotgrowth.c \ ++ cgsrfs.c cgstrf.c cgstrs.c ccopy_to_ucol.c \ ++ csnode_dfs.c csnode_bmod.c \ ++ cpanel_dfs.c cpanel_bmod.c creadhb.c \ ++ ccolumn_dfs.c ccolumn_bmod.c cpivotL.c cpruneL.c \ ++ cmemory.c cutil.c cmyblas2.c \ ++ cgsisx.c cgsitrf.c cldperm.c \ ++ ilu_cdrop_row.c ilu_csnode_dfs.c \ ++ ilu_ccolumn_dfs.c ilu_cpanel_dfs.c ilu_ccopy_to_ucol.c \ ++ ilu_cpivotL.c cdiagonal.c ++ ++ZLUSRC = \ ++ dcomplex.c zgssv.c zgssvx.c zsp_blas2.c zsp_blas3.c zgscon.c \ ++ zlangs.c zgsequ.c zlaqgs.c zpivotgrowth.c \ ++ zgsrfs.c zgstrf.c zgstrs.c zcopy_to_ucol.c \ ++ zsnode_dfs.c zsnode_bmod.c \ ++ zpanel_dfs.c zpanel_bmod.c zreadhb.c \ ++ zcolumn_dfs.c zcolumn_bmod.c zpivotL.c zpruneL.c \ ++ zmemory.c zutil.c zmyblas2.c \ ++ zgsisx.c zgsitrf.c zldperm.c \ ++ ilu_zdrop_row.c ilu_zsnode_dfs.c \ ++ ilu_zcolumn_dfs.c ilu_zpanel_dfs.c ilu_zcopy_to_ucol.c \ ++ ilu_zpivotL.c zdiagonal.c ++ ++lib_LTLIBRARIES = libsuperlu.la ++libsuperlu_la_SOURCES = \ ++ $(NOOPTAUX) \ ++ $(ALLAUX) $(LAAUX) \ ++ $(SLUSRC) $(SLASRC) \ ++ $(DLUSRC) $(DLASRC) \ ++ $(CLUSRC) $(CLASRC) \ ++ $(ZLUSRC) $(ZLASRC) ++libsuperlu_la_CFLAGS = $(CFLAGS_SAV) ++libsuperlu_la_LIBADD = $(BLAS_LIBS) libnoopt.la ++libsuperlu_la_LDFLAGS = -no-undefined -version-info 4:2:0 +diff --git a/ax_blas.m4 b/ax_blas.m4 +new file mode 100644 +index 0000000..e4f96cb +--- /dev/null ++++ b/ax_blas.m4 +@@ -0,0 +1,201 @@ ++# =========================================================================== ++# http://www.gnu.org/software/autoconf-archive/ax_blas.html ++# =========================================================================== ++# ++# SYNOPSIS ++# ++# AX_BLAS([ACTION-IF-FOUND[, ACTION-IF-NOT-FOUND]]) ++# ++# DESCRIPTION ++# ++# This macro looks for a library that implements the BLAS linear-algebra ++# interface (see http://www.netlib.org/blas/). On success, it sets the ++# BLAS_LIBS output variable to hold the requisite library linkages. ++# ++# To link with BLAS, you should link with: ++# ++# $BLAS_LIBS $LIBS $FLIBS ++# ++# in that order. FLIBS is the output variable of the ++# AC_F77_LIBRARY_LDFLAGS macro (called if necessary by AX_BLAS), and is ++# sometimes necessary in order to link with F77 libraries. Users will also ++# need to use AC_F77_DUMMY_MAIN (see the autoconf manual), for the same ++# reason. ++# ++# Many libraries are searched for, from ATLAS to CXML to ESSL. The user ++# may also use --with-blas=<lib> in order to use some specific BLAS ++# library <lib>. In order to link successfully, however, be aware that you ++# will probably need to use the same Fortran compiler (which can be set ++# via the F77 env. var.) as was used to compile the BLAS library. ++# ++# ACTION-IF-FOUND is a list of shell commands to run if a BLAS library is ++# found, and ACTION-IF-NOT-FOUND is a list of commands to run it if it is ++# not found. If ACTION-IF-FOUND is not specified, the default action will ++# define HAVE_BLAS. ++# ++# LICENSE ++# ++# Copyright (c) 2008 Steven G. Johnson <stevenj@alum.mit.edu> ++# ++# This program is free software: you can redistribute it and/or modify it ++# under the terms of the GNU General Public License as published by the ++# Free Software Foundation, either version 3 of the License, or (at your ++# option) any later version. ++# ++# This program is distributed in the hope that it will be useful, but ++# WITHOUT ANY WARRANTY; without even the implied warranty of ++# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General ++# Public License for more details. ++# ++# You should have received a copy of the GNU General Public License along ++# with this program. If not, see <http://www.gnu.org/licenses/>. ++# ++# As a special exception, the respective Autoconf Macro's copyright owner ++# gives unlimited permission to copy, distribute and modify the configure ++# scripts that are the output of Autoconf when processing the Macro. You ++# need not follow the terms of the GNU General Public License when using ++# or distributing such scripts, even though portions of the text of the ++# Macro appear in them. The GNU General Public License (GPL) does govern ++# all other use of the material that constitutes the Autoconf Macro. ++# ++# This special exception to the GPL applies to versions of the Autoconf ++# Macro released by the Autoconf Archive. When you make and distribute a ++# modified version of the Autoconf Macro, you may extend this special ++# exception to the GPL to apply to your modified version as well. ++ ++#serial 11 ++ ++AU_ALIAS([ACX_BLAS], [AX_BLAS]) ++AC_DEFUN([AX_BLAS], [ ++AC_PREREQ(2.50) ++AC_REQUIRE([AC_F77_LIBRARY_LDFLAGS]) ++ax_blas_ok=no ++ ++AC_ARG_WITH(blas, ++ [AS_HELP_STRING([--with-blas=<lib>], [use BLAS library <lib>])]) ++case $with_blas in ++ yes | "") ;; ++ no) ax_blas_ok=disable ;; ++ -* | */* | *.a | *.so | *.so.* | *.o) BLAS_LIBS="$with_blas" ;; ++ *) BLAS_LIBS="-l$with_blas" ;; ++esac ++ ++# Get fortran linker names of BLAS functions to check for. ++AC_F77_FUNC(sgemm) ++AC_F77_FUNC(dgemm) ++ ++ax_blas_save_LIBS="$LIBS" ++LIBS="$LIBS $FLIBS" ++ ++# First, check BLAS_LIBS environment variable ++if test $ax_blas_ok = no; then ++if test "x$BLAS_LIBS" != x; then ++ save_LIBS="$LIBS"; LIBS="$BLAS_LIBS $LIBS" ++ AC_MSG_CHECKING([for $sgemm in $BLAS_LIBS]) ++ AC_TRY_LINK_FUNC($sgemm, [ax_blas_ok=yes], [BLAS_LIBS=""]) ++ AC_MSG_RESULT($ax_blas_ok) ++ LIBS="$save_LIBS" ++fi ++fi ++ ++# BLAS linked to by default? (happens on some supercomputers) ++if test $ax_blas_ok = no; then ++ save_LIBS="$LIBS"; LIBS="$LIBS" ++ AC_MSG_CHECKING([if $sgemm is being linked in already]) ++ AC_TRY_LINK_FUNC($sgemm, [ax_blas_ok=yes]) ++ AC_MSG_RESULT($ax_blas_ok) ++ LIBS="$save_LIBS" ++fi ++ ++# BLAS in ATLAS library? (http://math-atlas.sourceforge.net/) ++if test $ax_blas_ok = no; then ++ AC_CHECK_LIB(atlas, ATL_xerbla, ++ [AC_CHECK_LIB(f77blas, $sgemm, ++ [AC_CHECK_LIB(cblas, cblas_dgemm, ++ [ax_blas_ok=yes ++ BLAS_LIBS="-lcblas -lf77blas -latlas"], ++ [], [-lf77blas -latlas])], ++ [], [-latlas])]) ++fi ++ ++# BLAS in PhiPACK libraries? (requires generic BLAS lib, too) ++if test $ax_blas_ok = no; then ++ AC_CHECK_LIB(blas, $sgemm, ++ [AC_CHECK_LIB(dgemm, $dgemm, ++ [AC_CHECK_LIB(sgemm, $sgemm, ++ [ax_blas_ok=yes; BLAS_LIBS="-lsgemm -ldgemm -lblas"], ++ [], [-lblas])], ++ [], [-lblas])]) ++fi ++ ++# BLAS in Intel MKL library? ++if test $ax_blas_ok = no; then ++ AC_CHECK_LIB(mkl, $sgemm, [ax_blas_ok=yes;BLAS_LIBS="-lmkl"]) ++fi ++ ++# BLAS in Apple vecLib library? ++if test $ax_blas_ok = no; then ++ save_LIBS="$LIBS"; LIBS="-framework vecLib $LIBS" ++ AC_MSG_CHECKING([for $sgemm in -framework vecLib]) ++ AC_TRY_LINK_FUNC($sgemm, [ax_blas_ok=yes;BLAS_LIBS="-framework vecLib"]) ++ AC_MSG_RESULT($ax_blas_ok) ++ LIBS="$save_LIBS" ++fi ++ ++# BLAS in Alpha CXML library? ++if test $ax_blas_ok = no; then ++ AC_CHECK_LIB(cxml, $sgemm, [ax_blas_ok=yes;BLAS_LIBS="-lcxml"]) ++fi ++ ++# BLAS in Alpha DXML library? (now called CXML, see above) ++if test $ax_blas_ok = no; then ++ AC_CHECK_LIB(dxml, $sgemm, [ax_blas_ok=yes;BLAS_LIBS="-ldxml"]) ++fi ++ ++# BLAS in Sun Performance library? ++if test $ax_blas_ok = no; then ++ if test "x$GCC" != xyes; then # only works with Sun CC ++ AC_CHECK_LIB(sunmath, acosp, ++ [AC_CHECK_LIB(sunperf, $sgemm, ++ [BLAS_LIBS="-xlic_lib=sunperf -lsunmath" ++ ax_blas_ok=yes],[],[-lsunmath])]) ++ fi ++fi ++ ++# BLAS in SCSL library? (SGI/Cray Scientific Library) ++if test $ax_blas_ok = no; then ++ AC_CHECK_LIB(scs, $sgemm, [ax_blas_ok=yes; BLAS_LIBS="-lscs"]) ++fi ++ ++# BLAS in SGIMATH library? ++if test $ax_blas_ok = no; then ++ AC_CHECK_LIB(complib.sgimath, $sgemm, ++ [ax_blas_ok=yes; BLAS_LIBS="-lcomplib.sgimath"]) ++fi ++ ++# BLAS in IBM ESSL library? (requires generic BLAS lib, too) ++if test $ax_blas_ok = no; then ++ AC_CHECK_LIB(blas, $sgemm, ++ [AC_CHECK_LIB(essl, $sgemm, ++ [ax_blas_ok=yes; BLAS_LIBS="-lessl -lblas"], ++ [], [-lblas $FLIBS])]) ++fi ++ ++# Generic BLAS library? ++if test $ax_blas_ok = no; then ++ AC_CHECK_LIB(blas, $sgemm, [ax_blas_ok=yes; BLAS_LIBS="-lblas"]) ++fi ++ ++AC_SUBST(BLAS_LIBS) ++ ++LIBS="$ax_blas_save_LIBS" ++ ++# Finally, execute ACTION-IF-FOUND/ACTION-IF-NOT-FOUND: ++if test x"$ax_blas_ok" = xyes; then ++ ifelse([$1],,AC_DEFINE(HAVE_BLAS,1,[Define if you have a BLAS library.]),[$1]) ++ : ++else ++ ax_blas_ok=no ++ $2 ++fi ++])dnl AX_BLAS +diff --git a/configure.ac b/configure.ac +new file mode 100644 +index 0000000..f6707be +--- /dev/null ++++ b/configure.ac +@@ -0,0 +1,16 @@ ++# -*- Autoconf -*- ++AC_PREREQ(2.59) ++AC_INIT(superlu, 4.3, xsli@lbl.gov) ++AM_INIT_AUTOMAKE([foreign]) ++AC_CONFIG_HEADER([config.h]) ++AC_PROG_INSTALL ++AC_PROG_LIBTOOL ++AC_PROG_F77 ++sinclude(ax_blas.m4) ++AX_BLAS ++if test x"$BLAS_LIBS" = x; then ++ AC_MSG_ERROR([Cannot find blas libraries]) ++fi ++AC_CHECK_LIB([m], [floor]) ++AC_CONFIG_FILES([Makefile SRC/Makefile superlu.pc]) ++AC_OUTPUT +diff --git a/superlu.pc.in b/superlu.pc.in +new file mode 100644 +index 0000000..7bf9942 +--- /dev/null ++++ b/superlu.pc.in +@@ -0,0 +1,13 @@ ++prefix=@prefix@ ++exec_prefix=@exec_prefix@ ++libdir=@libdir@ ++includedir=@includedir@ ++ ++Name: @PACKAGE_NAME@ ++Description: Sparse LU factorization library ++Version: @PACKAGE_VERSION@ ++URL: http://crd.lbl.gov/~xiaoye/SuperLU/ ++Libs: -L${libdir} -lsuperlu ++Libs.private: -lm @FLIBS@ ++Requires: blas ++Cflags: -I${includedir}/superlu diff --git a/sci-libs/superlu/files/superlu-4.3-format-security.patch b/sci-libs/superlu/files/superlu-4.3-format-security.patch new file mode 100644 index 000000000000..809408a166ab --- /dev/null +++ b/sci-libs/superlu/files/superlu-4.3-format-security.patch @@ -0,0 +1,16 @@ + SRC/util.c | 2 +- + 1 file changed, 1 insertion(+), 1 deletion(-) + +diff --git a/SRC/util.c b/SRC/util.c +index 858fbbc..c038ccf 100644 +--- a/SRC/util.c ++++ b/SRC/util.c +@@ -29,7 +29,7 @@ + + void superlu_abort_and_exit(char* msg) + { +- fprintf(stderr, msg); ++ fprintf(stderr, "%s", msg); + exit (-1); + } + diff --git a/sci-libs/superlu/files/superlu-5.2.1-no-implicits.patch b/sci-libs/superlu/files/superlu-5.2.1-no-implicits.patch new file mode 100644 index 000000000000..587380ce2e35 --- /dev/null +++ b/sci-libs/superlu/files/superlu-5.2.1-no-implicits.patch @@ -0,0 +1,153 @@ +diff --git a/SRC/clacon2.c b/SRC/clacon2.c +index 107bb64..39deb83 100644 +--- a/SRC/clacon2.c ++++ b/SRC/clacon2.c +@@ -106,6 +106,11 @@ clacon2_(int *n, complex *v, complex *x, float *est, int *kase, int isave[3]) + extern float smach(char *); + extern int icmax1_slu(int *, complex *, int *); + extern double scsum1_slu(int *, complex *, int *); ++#ifdef _CRAY ++ extern int CCOPY(int *, complex *, int *, complex [], int *); ++#else ++ extern int ccopy_(int *, complex *, int *, complex [], int *); ++#endif + + safmin = smach("Safe minimum"); /* lamch_("Safe minimum"); */ + if ( *kase == 0 ) { +diff --git a/SRC/dmach.c b/SRC/dmach.c +index 73beacb..cafdf1c 100644 +--- a/SRC/dmach.c ++++ b/SRC/dmach.c +@@ -11,6 +11,7 @@ at the top-level directory. + #include <float.h> + #include <math.h> + #include <stdio.h> ++#include <string.h> + + double dmach(char *cmach) + { +diff --git a/SRC/ilu_cdrop_row.c b/SRC/ilu_cdrop_row.c +index 4987548..09b8a93 100644 +--- a/SRC/ilu_cdrop_row.c ++++ b/SRC/ilu_cdrop_row.c +@@ -28,6 +28,7 @@ extern void caxpy_(int *, complex *, complex [], int *, complex [], int *); + extern void ccopy_(int *, complex [], int *, complex [], int *); + extern float scasum_(int *, complex *, int *); + extern float scnrm2_(int *, complex *, int *); ++extern void scopy_(int *, float [], int *, float [], int *); + extern double dnrm2_(int *, double [], int *); + extern int icamax_(int *, complex [], int *); + +diff --git a/SRC/ilu_zdrop_row.c b/SRC/ilu_zdrop_row.c +index f434dd9..2de1226 100644 +--- a/SRC/ilu_zdrop_row.c ++++ b/SRC/ilu_zdrop_row.c +@@ -29,6 +29,7 @@ extern void zcopy_(int *, doublecomplex [], int *, doublecomplex [], int *); + extern double dzasum_(int *, doublecomplex *, int *); + extern double dznrm2_(int *, doublecomplex *, int *); + extern double dnrm2_(int *, double [], int *); ++extern void dcopy_(int *, double [], int *, double [], int *); + extern int izamax_(int *, doublecomplex [], int *); + + static double *A; /* used in _compare_ only */ +diff --git a/SRC/slacon2.c b/SRC/slacon2.c +index 7c93341..50efe78 100644 +--- a/SRC/slacon2.c ++++ b/SRC/slacon2.c +@@ -157,7 +157,7 @@ L40: + #ifdef _CRAY + isave[1] = ISAMAX(n, &x[0], &c__1); /* j */ + #else +- isave[1] = idamax_(n, &x[0], &c__1); /* j */ ++ isave[1] = isamax_(n, &x[0], &c__1); /* j */ + #endif + --isave[1]; /* --j; */ + isave[2] = 2; /* iter = 2; */ +diff --git a/SRC/smach.c b/SRC/smach.c +index fff6c5f..0b69991 100644 +--- a/SRC/smach.c ++++ b/SRC/smach.c +@@ -11,6 +11,7 @@ at the top-level directory. + #include <float.h> + #include <math.h> + #include <stdio.h> ++#include <string.h> + + float smach(char *cmach) + { +diff --git a/SRC/sp_ienv.c b/SRC/sp_ienv.c +index 855d901..ce2865e 100644 +--- a/SRC/sp_ienv.c ++++ b/SRC/sp_ienv.c +@@ -24,6 +24,7 @@ at the top-level directory. + * History: Modified from lapack routine ILAENV + */ + #include "slu_Cnames.h" ++extern int input_error(char *, int *); + + /*! \brief + +diff --git a/SRC/zlacon2.c b/SRC/zlacon2.c +index b43c619..ed5f2b7 100644 +--- a/SRC/zlacon2.c ++++ b/SRC/zlacon2.c +@@ -106,6 +106,11 @@ zlacon2_(int *n, doublecomplex *v, doublecomplex *x, double *est, int *kase, int + extern double dmach(char *); + extern int izmax1_slu(int *, doublecomplex *, int *); + extern double dzsum1_slu(int *, doublecomplex *, int *); ++#ifdef _CRAY ++ extern int CCOPY(int *, doublecomplex *, int *, doublecomplex *, int *); ++#else ++ extern int zcopy_(int *, doublecomplex *, int *, doublecomplex *, int *); ++#endif + + safmin = dmach("Safe minimum"); /* lamch_("Safe minimum"); */ + if ( *kase == 0 ) { +diff --git a/TESTING/zdrive.c b/TESTING/zdrive.c +index 23e96fc..1e7d0aa 100644 +--- a/TESTING/zdrive.c ++++ b/TESTING/zdrive.c +@@ -21,6 +21,7 @@ at the top-level directory. + * Purpose: MAIN test program + */ + #include <string.h> ++#include <unistd.h> + #include "slu_zdefs.h" + + #define NTESTS 5 /* Number of test types */ +diff --git a/TESTING/cdrive.c b/TESTING/cdrive.c +index 8bc8d10..00fe0d8 100644 +--- a/TESTING/cdrive.c ++++ b/TESTING/cdrive.c +@@ -21,6 +21,7 @@ at the top-level directory. + * Purpose: MAIN test program + */ + #include <string.h> ++#include <unistd.h> + #include "slu_cdefs.h" + + #define NTESTS 5 /* Number of test types */ +diff --git a/TESTING/sdrive.c b/TESTING/sdrive.c +index 5b98038..cba0c83 100644 +--- a/TESTING/sdrive.c ++++ b/TESTING/sdrive.c +@@ -21,6 +21,7 @@ at the top-level directory. + * Purpose: MAIN test program + */ + #include <string.h> ++#include <unistd.h> + #include "slu_sdefs.h" + + #define NTESTS 5 /* Number of test types */ +diff --git a/TESTING/ddrive.c b/TESTING/ddrive.c +index 2c3f6fe..35685c5 100644 +--- a/TESTING/ddrive.c ++++ b/TESTING/ddrive.c +@@ -21,6 +21,7 @@ at the top-level directory. + * Purpose: MAIN test program + */ + #include <string.h> ++#include <unistd.h> + #include "slu_ddefs.h" + + #define NTESTS 5 /* Number of test types */ diff --git a/sci-libs/superlu/files/superlu-5.2.1-pkgconfig.patch b/sci-libs/superlu/files/superlu-5.2.1-pkgconfig.patch new file mode 100644 index 000000000000..63252dffdb57 --- /dev/null +++ b/sci-libs/superlu/files/superlu-5.2.1-pkgconfig.patch @@ -0,0 +1,29 @@ +diff --git a/CMakeLists.txt b/CMakeLists.txt +index d8abc1b..5883b34 100644 +--- a/CMakeLists.txt ++++ b/CMakeLists.txt +@@ -143,3 +143,6 @@ endif() + # ${CMAKE_C_COMPILER} ) + configure_file(${CMAKE_SOURCE_DIR}/make.inc.in ${CMAKE_SOURCE_DIR}/make.inc) + ++configure_file(${CMAKE_CURRENT_SOURCE_DIR}/superlu.pc.in ${CMAKE_CURRENT_BINARY_DIR}/superlu.pc @ONLY) ++install(FILES ${CMAKE_CURRENT_BINARY_DIR}/superlu.pc ++ DESTINATION ${CMAKE_INSTALL_LIBDIR}/pkgconfig) +diff --git a/superlu.pc.in b/superlu.pc.in +new file mode 100644 +index 0000000..09b1fff +--- /dev/null ++++ b/superlu.pc.in +@@ -0,0 +1,12 @@ ++prefix=@CMAKE_INSTALL_PREFIX@ ++libdir=@CMAKE_INSTALL_PREFIX@/@CMAKE_INSTALL_LIBDIR@ ++includedir=@CMAKE_INSTALL_PREFIX@/@CMAKE_INSTALL_INCLUDEDIR@ ++ ++Name: @CMAKE_PROJECT_NAME@ ++Description: Direct solution of large, sparse systems of linear equations ++Version: @PROJECT_VERSION@ ++URL: http://crd-legacy.lbl.gov/~xiaoye/SuperLU/ ++ ++Libs: -L${libdir} -lsuperlu ++Libs.private: @BLAS_LIB@ -lm ++Cflags: -I${includedir} diff --git a/sci-libs/superlu/metadata.xml b/sci-libs/superlu/metadata.xml new file mode 100644 index 000000000000..01512c58f866 --- /dev/null +++ b/sci-libs/superlu/metadata.xml @@ -0,0 +1,28 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> +<pkgmetadata> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> + SuperLU is a general purpose library for the direct solution of large, + sparse, nonsymmetric systems of linear equations on high performance + machines. The library is written in C and is callable from either C or + Fortran. The library routines will perform an LU decomposition with + partial pivoting and triangular system solves through forward and back + substitution. The LU factorization routines can handle non-square + matrices but the triangular solves are performed only for square + matrices. The matrix columns may be preordered (before factorization) + either through library or user supplied routines. This preordering for + sparsity is completely separate from the factorization. Working + precision iterative refinement subroutines are provided for improved + backward stability. Routines are also provided to equilibrate the + system, estimate the condition number, calculate the relative backward + error, and estimate error bounds for the refined solutions. + </longdescription> + <upstream> + <remote-id type="github">xiaoyeli/superlu</remote-id> + </upstream> + +</pkgmetadata> diff --git a/sci-libs/superlu/superlu-4.3-r1.ebuild b/sci-libs/superlu/superlu-4.3-r1.ebuild new file mode 100644 index 000000000000..27da140292af --- /dev/null +++ b/sci-libs/superlu/superlu-4.3-r1.ebuild @@ -0,0 +1,73 @@ +# Copyright 1999-2017 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 + +EAPI=5 + +AUTOTOOLS_AUTORECONF=true +AUTOTOOLS_IN_SOURCE_BUILD=1 + +inherit autotools-utils fortran-2 toolchain-funcs multilib + +MY_PN=SuperLU + +DESCRIPTION="Sparse LU factorization library" +HOMEPAGE="http://crd-legacy.lbl.gov/~xiaoye/SuperLU/" +SRC_URI="${HOMEPAGE}/${PN}_${PV}.tar.gz" + +LICENSE="BSD" +SLOT="0" +KEYWORDS="~alpha amd64 ~arm ~hppa ppc ppc64 x86 ~amd64-linux ~x86-linux" +IUSE="doc examples static-libs test" + +RDEPEND=" + virtual/blas" +DEPEND="${RDEPEND} + virtual/pkgconfig + test? ( app-shells/tcsh )" + +S="${WORKDIR}/${MY_PN}_${PV}" + +PATCHES=( + "${FILESDIR}"/${P}-autotools.patch + "${FILESDIR}"/${P}-format-security.patch + ) + +src_prepare() { + unset VERBOSE + sed \ + -e "s:= ar:= $(tc-getAR):g" \ + -e "s:= ranlib:= $(tc-getRANLIB):g" \ + -i make.inc || die + + autotools-utils_src_prepare +} + +src_configure() { + local myeconfargs=( --with-blas="$($(tc-getPKG_CONFIG) --libs blas)" ) + autotools-utils_src_configure + rm EXAMPLE/*itersol1 || die +} + +src_test() { + cd "${BUILD_DIR}"/TESTING + emake -j1 \ + CC="$(tc-getCC)" \ + FORTRAN="$(tc-getFC)" \ + LOADER="$(tc-getCC)" \ + CFLAGS="${CFLAGS}" \ + FFLAGS="${FFLAGS}" \ + LOADOPTS="${LDFLAGS}" \ + BLASLIB="$($(tc-getPKG_CONFIG) --libs blas)" \ + SUPERLULIB="${S}/SRC/.libs/libsuperlu$(get_libname)" \ + LD_LIBRARY_PATH="${S}/SRC/.libs" \ + DYLD_LIBRARY_PATH="${S}/SRC/.libs" +} + +src_install() { + autotools-utils_src_install + use doc && dodoc DOC/ug.pdf && dohtml DOC/html/* + if use examples; then + insinto /usr/share/doc/${PF}/examples + doins -r EXAMPLE FORTRAN + fi +} diff --git a/sci-libs/superlu/superlu-5.2.1-r1.ebuild b/sci-libs/superlu/superlu-5.2.1-r1.ebuild new file mode 100644 index 000000000000..8f2fa083bb98 --- /dev/null +++ b/sci-libs/superlu/superlu-5.2.1-r1.ebuild @@ -0,0 +1,68 @@ +# Copyright 1999-2017 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 + +EAPI=6 + +FORTRAN_STANDARD=77 + +inherit cmake-utils fortran-2 + +MY_PN=SuperLU + +if [[ ${PV} != *9999* ]]; then + inherit versionator + SRC_URI="http://crd-legacy.lbl.gov/~xiaoye/SuperLU//${PN}_${PV}.tar.gz" + KEYWORDS="~alpha ~amd64 ~arm ~arm64 ~hppa ~ia64 ~ppc ~ppc64 ~x86 ~amd64-linux ~x86-linux" + SLOT="0/$(get_major_version)" + S="${WORKDIR}/SuperLU_${PV}" +else + inherit git-r3 + GIT_ECLASS="git-r3" + EGIT_REPO_URI="https://github.com/xiaoyeli/${PN}" + SLOT="0/9999" + KEYWORDS="~arm64 ~hppa ~ia64" +fi + +DESCRIPTION="Sparse LU factorization library" +HOMEPAGE="http://crd-legacy.lbl.gov/~xiaoye/SuperLU/" +LICENSE="BSD" + +IUSE="doc examples test" + +RDEPEND="virtual/blas" +DEPEND="${RDEPEND} + virtual/pkgconfig + test? ( app-shells/tcsh )" + +PATCHES=( + "${FILESDIR}"/${P}-no-implicits.patch + "${FILESDIR}"/${P}-pkgconfig.patch +) + +S="${WORKDIR}/${MY_PN}_${PV}" + +src_prepare() { + default + # respect user's CFLAGS + sed -i -e 's/O3//' CMakeLists.txt || die +} + +src_configure() { + local mycmakeargs+=( + -DCMAKE_INSTALL_INCLUDEDIR="include/superlu" + -DBUILD_SHARED_LIBS=ON + -Denable_blaslib=OFF + -Denable_tests=$(usex test) + ) + cmake-utils_src_configure +} + +src_install() { + cmake-utils_src_install + use doc && dodoc -r DOC/html + if use examples; then + insinto /usr/share/doc/${PF}/examples + doins -r EXAMPLE FORTRAN + docompress -x /usr/share/doc/${PF}/examples + fi +} |