gentoo auto-resync : 13:07:2024 - 12:26:41

11 files changed, 0 insertions, 211 deletions

diff --git a/sci-libs/Manifest.gz b/sci-libs/Manifest.gz
index 0ccd5c0926fa..54e03e4a958e 100644
--- a/sci-libs/Manifest.gz
+++ b/sci-libs/Manifest.gz
diff --git a/sci-libs/coinhsl/Manifest b/sci-libs/coinhsl/Manifest
deleted file mode 100644
index 986144ce822a..000000000000
--- a/sci-libs/coinhsl/Manifest
+++ /dev/null
@@ -1,3 +0,0 @@
-DIST coinhsl-2015.06.23.tar.gz 908522 BLAKE2B ccc64a7790b1f9105439f6690e87bed52ff48306132db5fa27a036b4ce87472dfc3ca92f3e9d94aefdf737ed292568f36831eb24ac94d77f4b9bab84bc3ea36e SHA512 ad831d6ffd3c1e46481da8e58c7075adc69cb02800002c2067053fd354c5971214025982b24a9b74c681c2c3d86fd5adac78820242209feb75898165cf38753f
-EBUILD coinhsl-2015.06.23.ebuild 583 BLAKE2B 6b1656b77221ab29f0cad17c6809522f3c7eef4a9f3f90e927dd172fb11d515c867429e572e707faf118a9a65cad1d6f630d97618e742662e6848f9a3afab01f SHA512 496d4ac65b6e2c86e70fb0ea7638fb3b77445cc3b8261a31affa9a632c0b7ebea46421cfccf6a3fee60d4ec19e91500890bb8ca7846599282757c56ad504ee7e
-MISC metadata.xml 582 BLAKE2B 48b8b78119773fe4fad4f11b9bfb5ccfa8c8bccee3ba3f15b9fb94532c46084cd31134cca595d979fc18d294b63eaf916aa38ec90b4e439133654e3f61ee42b9 SHA512 1a06c1acf8cf6e5248944ef01a0b1caf7f127224c82c0874ef72050d7af90d74399aefd32986be46aaf027d59165547a7c96bed663c65dbe4dbb32fe0ba323c9
diff --git a/sci-libs/coinhsl/coinhsl-2015.06.23.ebuild b/sci-libs/coinhsl/coinhsl-2015.06.23.ebuild
deleted file mode 100644
index 9e1cac607992..000000000000
--- a/sci-libs/coinhsl/coinhsl-2015.06.23.ebuild
+++ /dev/null
@@ -1,30 +0,0 @@
-# Copyright 1999-2018 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=6
-
-FORTRAN_STANDARD="77 90"
-
-inherit fortran-2 toolchain-funcs
-
-DESCRIPTION="HSL mathematical software library for IPOPT"
-HOMEPAGE="http://www.hsl.rl.ac.uk/ipopt"
-SRC_URI="${P}.tar.gz"
-
-LICENSE="HSL"
-SLOT="0"
-KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
-
-RDEPEND="
-	sci-libs/metis
-	virtual/blas"
-DEPEND="${RDEPEND}
-	virtual/pkgconfig"
-
-RESTRICT="mirror fetch"
-
-src_configure() {
-	export LIBS="$($(tc-getPKG_CONFIG) --libs metis blas lapack)"
-	default
-	MAKEOPTS+=" -j1"
-}
diff --git a/sci-libs/coinhsl/metadata.xml b/sci-libs/coinhsl/metadata.xml
deleted file mode 100644
index 8225fda14e49..000000000000
--- a/sci-libs/coinhsl/metadata.xml
+++ /dev/null
@@ -1,15 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
-	<maintainer type="project">
-		<email>sci@gentoo.org</email>
-		<name>Gentoo Science Project</name>
-	</maintainer>
-	<longdescription lang="en">
-		HSL (formerly the Harwell Subroutine Library) is a collection of
-		state-of-the-art packages for large-scale scientific computation
-		such as the solution of sparse linear systems of equations and
-		sparse eigenvalue problems. This package is specific as a plugin for
-		Ipopt.
-	</longdescription>
-</pkgmetadata>
diff --git a/sci-libs/h5part/Manifest b/sci-libs/h5part/Manifest
deleted file mode 100644
index 7048091e4994..000000000000
--- a/sci-libs/h5part/Manifest
+++ /dev/null
@@ -1,4 +0,0 @@
-AUX h5part-1.6.6-mpio.patch 948 BLAKE2B fb85c4cb0457a7f65212592c26ed1aeb8e917a9ebb4dbc8904c269bef6a8bc91f87e655de4a5f3e728d888bcd2526007de0cb10fab360cd079cd97a2e58e6834 SHA512 41ae0a9b9f2ae84b29133879136b392cf58c68ab75195179c7b95600bc693b3f6d2ab74533285a3727590f5aac61db2d9f4c9c732720fba15164fea8f29e7a34
-DIST H5Part-1.6.6.tar.gz 441755 BLAKE2B bc0027a91cc5f28009dc1b716fe548c670307ca19782158314d3358e66091608cf81149dece1fddf4f279aa920b06930019a26c5f34e4e3ce58df80d003ff5e6 SHA512 0842017bfe1510746e6f9451daaaaff3d9f6eee5209e241bcc8f2d0ce96450b8929f718c41a3434f53c9457adc2547628ad57ac8a0fb1cbfb7c74862aebf996d
-EBUILD h5part-1.6.6-r1.ebuild 634 BLAKE2B c04b03ce27c26929d74694c88a5214a77ccf518287bd3d434a4e04f9039d2159c1cdfb99b5cb0592d600e10f4f2e318e1700c84cc4f050796c9dc84bfcfea58b SHA512 43a36c0c487ff845665a5ebc48458044ff8732ee32c662627d24f7a0706557c82111e1b7241c508dbd596ffab68828c42706a92e278e52294e4342a03bc49d4b
-MISC metadata.xml 254 BLAKE2B b855316ec6a32691e84730979c9a077765d46802f09c19f3a06f2cddf677674c9a2ea24c9b57a0fc6344d7f70276ca507a68f5fa690555360665ac494fca54c2 SHA512 5f6faacd216c7ece09e847c09115add5261e7a899e0b0c9304f2ee72e2d0ad208338939e4e37946008bdc81fbbacf415fb220c5c1f9832b17f18c6778d0c0368
diff --git a/sci-libs/h5part/files/h5part-1.6.6-mpio.patch b/sci-libs/h5part/files/h5part-1.6.6-mpio.patch
deleted file mode 100644
index 152cfec34985..000000000000
--- a/sci-libs/h5part/files/h5part-1.6.6-mpio.patch
+++ /dev/null
@@ -1,26 +0,0 @@
-https://github.com/quinoacomputing/H5Part/commit/b8b106c368c3400b4df3d38e97ae2943d37d3c7d.patch
-
-From b8b106c368c3400b4df3d38e97ae2943d37d3c7d Mon Sep 17 00:00:00 2001
-From: Jozsef Bakosi <jbakosi@lanl.gov>
-Date: Thu, 28 Jul 2016 08:37:24 -0600
-Subject: [PATCH] Replace H5Pset_fapl_mpiposix with H5Pset_fapl_mpio
-
-Based on the advice at
-http://www.unidata.ucar.edu/mailing_lists/archives/netcdfgroup/2014/msg00188.html.
----
- src/H5Part.c | 2 +-
- 1 file changed, 1 insertion(+), 1 deletion(-)
-
-diff --git a/src/H5Part.c b/src/H5Part.c
-index 433a574..8a1b893 100644
---- a/src/H5Part.c
-+++ b/src/H5Part.c
-@@ -246,7 +246,7 @@ _H5Part_open_file (
- 		/* select the HDF5 VFD */
- 		if (flags & H5PART_VFD_MPIPOSIX) {
- 			_H5Part_print_info ( "Selecting MPI-POSIX VFD" );
--			if (H5Pset_fapl_mpiposix ( f->access_prop, comm, 0 ) < 0) {
-+			if (H5Pset_fapl_mpio ( f->access_prop, comm, 0 ) < 0) {
- 				HANDLE_H5P_SET_FAPL_ERR;
- 				goto error_cleanup;
- 			}
diff --git a/sci-libs/h5part/h5part-1.6.6-r1.ebuild b/sci-libs/h5part/h5part-1.6.6-r1.ebuild
deleted file mode 100644
index 388a4fe89c55..000000000000
--- a/sci-libs/h5part/h5part-1.6.6-r1.ebuild
+++ /dev/null
@@ -1,28 +0,0 @@
-# Copyright 1999-2024 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=6
-
-MY_P="${P^^[hp]}"
-DESCRIPTION="Portable High Performance Parallel Data Interface to HDF5"
-HOMEPAGE="https://vis.lbl.gov/archive/Research/H5Part/"
-SRC_URI="https://codeforge.lbl.gov/frs/download.php/latestfile/18/${MY_P}.tar.gz"
-
-LICENSE="BSD"
-SLOT="0"
-KEYWORDS="~amd64 ~arm ~x86"
-IUSE=""
-
-DEPEND="
-	virtual/mpi
-	sci-libs/hdf5:=[mpi]
-"
-RDEPEND="${DEPEND}"
-
-PATCHES=( "${FILESDIR}/${P}-mpio.patch" )
-
-S="${WORKDIR}/${MY_P}"
-
-src_configure() {
-	econf --enable-parallel --enable-shared --disable-static CC=mpicc CXX=mpicxx
-}
diff --git a/sci-libs/h5part/metadata.xml b/sci-libs/h5part/metadata.xml
deleted file mode 100644
index c0cd18916a93..000000000000
--- a/sci-libs/h5part/metadata.xml
+++ /dev/null
@@ -1,8 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
-	<maintainer type="project">
-		<email>sci@gentoo.org</email>
-		<name>Gentoo Science Project</name>
-	</maintainer>
-</pkgmetadata>
diff --git a/sci-libs/o2scl/Manifest b/sci-libs/o2scl/Manifest
deleted file mode 100644
index a997fc3a1e49..000000000000
--- a/sci-libs/o2scl/Manifest
+++ /dev/null
@@ -1,3 +0,0 @@
-DIST o2scl-0.920.tar.gz 34498666 BLAKE2B de269d1d6d329786d34dcbf84b6cb89d5bfae709ff1e0116455dbf8cee9e66d45b2a66086ca467037c572a8495ad198a23836861914c681050471810dda00354 SHA512 a80c959b76d15473e206f1caac496607af254f0617f7a18d13bd9732861b6c51f5db8ca3ff6866bb8d0ea70865d4ac94cb972e0a0c158f19034667340341467c
-EBUILD o2scl-0.920.ebuild 1723 BLAKE2B fc99b6db606efff8a4666048a3cd2f793341c23309113f1cfed407156defb5bd92e5bb8284309614899607de5ded09282ca3202929f8b547cb720c23212f2979 SHA512 c0978da228f15a5953d19a54a3972cf121ab74ca41cd03a43745a0522b6fb0e3127c22695bbfc6c891504bc55bcc10d544075dd04601fa0115b1a36162248231
-MISC metadata.xml 917 BLAKE2B 853243ea026afa409c8be80040f9a97e6b74f5126168f8df4e83367ace9a26ff444324461097d040b187f4f8b22cbf52fd9c9993833b39e13d16b5926f57f490 SHA512 8198e119295aca7034964f2d239dddfb0711240ca2658656eb9ba90bc363a31f7e02eb239130bf54eaa670fa81feb20072b7e11acb69e3d3189561318f506e66
diff --git a/sci-libs/o2scl/metadata.xml b/sci-libs/o2scl/metadata.xml
deleted file mode 100644
index bfbde3f72f12..000000000000
--- a/sci-libs/o2scl/metadata.xml
+++ /dev/null
@@ -1,22 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
-  <maintainer type="project">
-    <email>sci@gentoo.org</email>
-    <name>Gentoo Science Project</name>
-  </maintainer>
-  <longdescription lang="en">
-  O2scl is a C++ class library for object-oriented numerical
-  programming. It includes classes based on numerical routines from
-  GSL and CERNLIB and two sub-libraries: thermodynamics of ideal and
-  nearly-ideal particles with quantum statistics and e quations of
-  state for finite density relevant for neutron stars.
-  </longdescription>
-  <use>
-    <flag name="armadillo">Build matrix manipulation with <pkg>sci-libs/armadillo</pkg></flag>    
-    <flag name="eigen">Build matrix manipulation with <pkg>dev-cpp/eigen</pkg></flag>
-  </use>
-  <upstream>
-    <remote-id type="github">awsteiner/o2scl</remote-id>
-  </upstream>
-</pkgmetadata>
diff --git a/sci-libs/o2scl/o2scl-0.920.ebuild b/sci-libs/o2scl/o2scl-0.920.ebuild
deleted file mode 100644
index b82c2a9bcc19..000000000000
--- a/sci-libs/o2scl/o2scl-0.920.ebuild
+++ /dev/null
@@ -1,72 +0,0 @@
-# Copyright 1999-2022 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=6
-
-inherit flag-o-matic toolchain-funcs
-
-DESCRIPTION="Object-oriented Scientific Computing Library"
-HOMEPAGE="https://web.utk.edu/~asteine1/o2scl/"
-SRC_URI="https://github.com/awsteiner/${PN}/releases/download/v${PV}/${P}.tar.gz"
-
-LICENSE="GPL-3"
-SLOT="0"
-KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
-IUSE="armadillo debug doc examples eigen fftw gsl hdf5 openmp readline static-libs"
-
-RDEPEND="
-	dev-libs/boost:=
-	>=sci-libs/gsl-2:0=
-	virtual/cblas:=
-	eigen? ( dev-cpp/eigen:3 )
-	armadillo? ( sci-libs/armadillo[lapack] )
-	fftw? ( sci-libs/fftw:3.0= )
-	hdf5? ( sci-libs/hdf5:0= )
-	readline? ( sys-libs/readline:0= )
-"
-DEPEND="${RDEPEND}
-	virtual/pkgconfig"
-
-pkg_pretend() {
-	[[ ${MERGE_TYPE} != binary ]] && use openmp && tc-check-openmp
-}
-
-pkg_setup() {
-	if [[ ${MERGE_TYPE} != binary ]] && use openmp && ! tc-check-openmp; then
-		ewarn "OpenMP is not available in your current selected compiler"
-		die "need openmp capable compiler"
-	fi
-}
-
-src_configure() {
-	use debug || append-cppflags -DO2SCL_NO_RANGE_CHECK
-	econf \
-		--enable-acol \
-		$(use_enable armadillo) \
-		$(use_enable eigen) \
-		$(use_enable fftw) \
-		$(use_enable gsl gsl2) \
-		$(use_enable hdf5 hdf) \
-		$(use_enable hdf5 partlib) \
-		$(use_enable hdf5 eoslib) \
-		$(use_enable openmp) \
-		$(use_enable static-libs static)
-}
-
-src_install() {
-	default
-
-	if ! use static-libs; then
-		find "${ED}" -name '*.la' -delete || die
-	fi
-
-	rm -r "${ED}"/usr/doc || die
-	if use doc; then
-		dodoc -r doc/o2scl/html
-		docompress -x /usr/share/doc/${PF}/html
-	fi
-	if use examples; then
-		dodoc -r examples
-		docompress -x /usr/share/doc/${PF}/examples
-	fi
-}