diff options
author | V3n3RiX <venerix@redcorelinux.org> | 2020-01-15 15:51:32 +0000 |
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committer | V3n3RiX <venerix@redcorelinux.org> | 2020-01-15 15:51:32 +0000 |
commit | 21435953e16cda318a82334ddbadb3b5c36d9ea7 (patch) | |
tree | e1810a4b135afce04b34862ef0fab2bfaeb8aeca /sci-mathematics/pymc | |
parent | 7bc9c63c9da678a7e6fceb095d56c634afd22c56 (diff) |
gentoo resync : 15.01.2020
Diffstat (limited to 'sci-mathematics/pymc')
-rw-r--r-- | sci-mathematics/pymc/Manifest | 4 | ||||
-rw-r--r-- | sci-mathematics/pymc/files/pymc-2.3.6-remove-hardcoded-blas.patch | 11 | ||||
-rw-r--r-- | sci-mathematics/pymc/metadata.xml | 16 | ||||
-rw-r--r-- | sci-mathematics/pymc/pymc-2.3.6.ebuild | 54 |
4 files changed, 0 insertions, 85 deletions
diff --git a/sci-mathematics/pymc/Manifest b/sci-mathematics/pymc/Manifest deleted file mode 100644 index f061f545be53..000000000000 --- a/sci-mathematics/pymc/Manifest +++ /dev/null @@ -1,4 +0,0 @@ -AUX pymc-2.3.6-remove-hardcoded-blas.patch 414 BLAKE2B 6bf59a1088f701c0897c002aabe0c9de0a87067da24ffb965afcb304950662f551fc63d4694cda2d6832d5faf963c3801e3fe2365c46ab5b791df1c28de0ad3f SHA512 776ecd9876342215c925ad4a2dfa123e9f6656c6e5a8f3b8d208cc89befc84164b5355d4c1afce8be8962951c3343629cfacb0449d6d0b05d9333886803bbb4a -DIST pymc-2.3.6.zip 402827 BLAKE2B e8ed875d84e8783f35f9186c6d7d659f29a49937896261a0f8bd892f324d2e17887ce37381aece8d97e47389edf7d727dc73a40ef6abfe4682a7bcbd1a768336 SHA512 4b5e0663ca296efd8d242a0b6362a12d475cdabf661a430de5455e60999acf8a4a30d053303c2f79e8aec3e5e7d120f56cb341e283aa87f31c224e4e57300d13 -EBUILD pymc-2.3.6.ebuild 1323 BLAKE2B f39df705cf5011997e341041e8e30a1509f5aee25307b7626dcbde50e6461fdbdb813ce1a235ac74085a2ee5a3ca43fbe9f03ccd30169af15b9a2c43853dd13e SHA512 1b60973ba58034119c660e39dcaa9852ea7a417c8f07d292ed2d0cf75976d1057b08f19a18a78b1240cb35a58e646ef1acd887b9c6091b99898f79e8e3cd5159 -MISC metadata.xml 554 BLAKE2B 229a895f97fe3880b2b739dcbe09bb377bb9625eaa0ef6388097143d90b8aaae7c08100ff5e9503f5c2c1ea62e574f712de2826770177a52ea27d925edc38069 SHA512 0d9ac09e21100370ed731a23cbce01c73a734a4e2adb282a2c0cc185c75d011f3aeafc75283d27e30635f00cf7fb27a6a502e1a9cb922892d10016d6e9770d65 diff --git a/sci-mathematics/pymc/files/pymc-2.3.6-remove-hardcoded-blas.patch b/sci-mathematics/pymc/files/pymc-2.3.6-remove-hardcoded-blas.patch deleted file mode 100644 index 93ce86f5c717..000000000000 --- a/sci-mathematics/pymc/files/pymc-2.3.6-remove-hardcoded-blas.patch +++ /dev/null @@ -1,11 +0,0 @@ ---- a/setup.py -+++ b/setup.py -@@ -80,7 +80,7 @@ - - # Compile covariance functions - config.add_extension(name='gp.cov_funs.isotropic_cov_funs',\ --sources=['pymc/gp/cov_funs/isotropic_cov_funs.f','blas/BLAS/dscal.f'],\ -+sources=['pymc/gp/cov_funs/isotropic_cov_funs.f'],\ - extra_info=lapack_info) - - config.add_extension(name='gp.cov_funs.distances',sources=['pymc/gp/cov_funs/distances.f'], extra_info=lapack_info) diff --git a/sci-mathematics/pymc/metadata.xml b/sci-mathematics/pymc/metadata.xml deleted file mode 100644 index 0b8c7cb3f0e5..000000000000 --- a/sci-mathematics/pymc/metadata.xml +++ /dev/null @@ -1,16 +0,0 @@ -<?xml version='1.0' encoding='UTF-8'?> -<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> -<pkgmetadata> - <maintainer type="person"> - <email>heroxbd@gentoo.org</email> - <name>Benda Xu</name> - </maintainer> - <longdescription lang="en"> -PyMC is a python module that implements Bayesian statistical models -and fitting algorithms, including Markov chain Monte Carlo. - </longdescription> - <upstream> - <remote-id type="github">pymc-devs/pymc</remote-id> - <remote-id type="pypi">pymc</remote-id> - </upstream> -</pkgmetadata> diff --git a/sci-mathematics/pymc/pymc-2.3.6.ebuild b/sci-mathematics/pymc/pymc-2.3.6.ebuild deleted file mode 100644 index 17a639ab072b..000000000000 --- a/sci-mathematics/pymc/pymc-2.3.6.ebuild +++ /dev/null @@ -1,54 +0,0 @@ -# Copyright 1999-2019 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=6 - -PYTHON_COMPAT=( python{2_7,3_5,3_6} ) - -inherit distutils-r1 flag-o-matic fortran-2 toolchain-funcs - -DESCRIPTION="Markov Chain Monte Carlo sampling toolkit" -HOMEPAGE="https://github.com/${PN}-devs/${PN} https://pypi.org/project/${PN}" -SRC_URI="mirror://pypi/${PN:0:1}/${PN}/${P}.zip" - -SLOT=0 -KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" -LICENSE=AFL-3.0 -IUSE="test" -RESTRICT="!test? ( test )" - -RDEPEND=">=dev-python/numpy-1.6[${PYTHON_USEDEP},lapack] - >=dev-python/matplotlib-1.0[${PYTHON_USEDEP}]" -DEPEND=" - test? ( - ${RDEPEND} - dev-python/nose[${PYTHON_USEDEP}] - )" - -PATCHES=( "${FILESDIR}/${PN}-2.3.6-remove-hardcoded-blas.patch" ) - -# tests freeze at some point -#RESTRICT="test" - -python_prepare_all() { - # forcibly remove bundled libs, just to be sure... - rm -r blas || die - - distutils-r1_python_prepare_all -} - -python_configure_all() { - append-fflags -fPIC - append-ldflags -shared - - [[ $(tc-getFC) == *gfortran* ]] && mydistutilsargs=( config_fc --fcompiler=gnu95 ) -} - -python_test() { - distutils_install_for_testing - cd "${TEST_DIR}" || die - # Use agg backend instead of gtk - echo 'backend : agg' > matplotlibrc || die - - ${EPYTHON} -c "import pymc; pymc.test()" || die "Tests failed on ${EPYTHON}" -} |