diff options
author | V3n3RiX <venerix@koprulu.sector> | 2024-12-13 02:01:50 +0000 |
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committer | V3n3RiX <venerix@koprulu.sector> | 2024-12-13 02:01:50 +0000 |
commit | 2a3e0d61b3d88306b6fae46756f9ba7d230222ae (patch) | |
tree | a0d3259dd259861a49a2d3e6e9220beaa8ec39c2 /sci-mathematics | |
parent | 39c32f4d5dca9f6293fccb69e9d50baf494c8de4 (diff) |
gentoo auto-resync : 13:12:2024 - 02:01:50
Diffstat (limited to 'sci-mathematics')
-rw-r--r-- | sci-mathematics/Manifest.gz | bin | 19662 -> 19668 bytes | |||
-rw-r--r-- | sci-mathematics/petsc/Manifest | 2 | ||||
-rw-r--r-- | sci-mathematics/petsc/petsc-3.22.2.ebuild | 235 | ||||
-rw-r--r-- | sci-mathematics/slepc/Manifest | 3 | ||||
-rw-r--r-- | sci-mathematics/slepc/slepc-3.22.1.ebuild | 125 |
5 files changed, 365 insertions, 0 deletions
diff --git a/sci-mathematics/Manifest.gz b/sci-mathematics/Manifest.gz Binary files differindex 72e1645f6bac..9c0a2c278d05 100644 --- a/sci-mathematics/Manifest.gz +++ b/sci-mathematics/Manifest.gz diff --git a/sci-mathematics/petsc/Manifest b/sci-mathematics/petsc/Manifest index 718cd676289c..9f5f108dc4b3 100644 --- a/sci-mathematics/petsc/Manifest +++ b/sci-mathematics/petsc/Manifest @@ -11,6 +11,7 @@ DIST petsc-3.19.2.tar.gz 16627765 BLAKE2B 1267db717989c3819f32ac6a62642054af2ac4 DIST petsc-3.19.4.tar.gz 16630006 BLAKE2B 577655fff12f9f54570393b2023d3386e66c7d4351ef20922f4b8100cbc54eeec0fb6ce249774cb54d2d06062a610c7d755e3b44994a3e053c0c02889810adc8 SHA512 b32b8cf72ea6bf3d976067ce0b722a6fb2ede525bc2293b72daf5693de48c6256e50f3968c0464a5e0d3bb067b936e1d78b66b51626fd27bbef2f57322509564 DIST petsc-3.20.5.tar.gz 17077395 BLAKE2B e76ff83572f7f0fcfa85b80f36301e0378d240e60726f07ab78a66b87591434bda6a96758037580370965f91c03341d95f60cfb961c2ab6707eeaafd5a7b1e1d SHA512 1e0ebdacbcc9db22dbe3803cbc13f5e0138d0412c328ff49cab024c839527c73b28983717104daf0858d482a8804b931c5c2bf20363c6b801d2be7d27219692f DIST petsc-3.21.3.tar.gz 17334266 BLAKE2B 6a34ae9f57b6f6c9ece4d411da8374d0b5675539f4041b8aa872c639084c7d38b7ddcf27889e7b835df453a8725869d04b4515615dba5998fb00fe28074043ec SHA512 699bbf3ddfc8fe8ebd4a1cb51a04108c10cafb65d30e7a74a9bf1b1ddd0f4350f0b893b256ea8a835e076e0a2f982189902bff30a9e301b3e04b539d2d2b6f99 +DIST petsc-3.22.2.tar.gz 16753088 BLAKE2B 6c4d63ef36fc65913322f85d63dfd037268ba957e07a3d2d4df1e71f4b5c7625cfe1ea3007a97b78886d526509ae381ebc90f9be047c2ef93edd1b250c02d59e SHA512 77f4f51aea56fc254dcc0df254bc69ee2cf91a598834108bfc652b0c21dbb515e7b1000e8771fec8d2b5e4c0f56c50762aa77d0e8b36c417c0eafe6fffb213af EBUILD petsc-3.16.0-r2.ebuild 5425 BLAKE2B a38f36283aa2a802f886565daebfd57681c8bf81a56ba8fde8f82247216cdb21548fc4bf5088d76f0e4ea56afc29f8891ac20986cbfb1cd05c3408e85977a636 SHA512 ed7e01fef273d5c6acbb39dfcf94df854555cd5c27173a5b6e4acdc2f542a3cfc126c361cb0193c7a8fa266478182634a97615a9c72bbe2b98e6cce5ba7d0cd9 EBUILD petsc-3.17.1-r2.ebuild 5401 BLAKE2B 0e77a30b419b34758ac36ece7f3a210c1ca8a878bf2cf381039def0ef354d497b5e5d5172e5c663a61e54d256c43bd623fd299839f73db8d9cd9885c1d1cab2a SHA512 c9820edc2ae6218ccffcb4fc8213431c33e9e0dc2d1b7c4e79a70f79485ee0dbd6ecacdc2630732b2b65fc98044914d25b8a6c5fbee35908bef4e4d41f6a6d63 EBUILD petsc-3.18.2-r1.ebuild 7323 BLAKE2B d42ef6d5dea72728bca65edbd783ad38ed809ed9ab312cd5f21e9039d560166beca6a44859094346a52f33ea5810b429cd61db4812ef8747966778d77636d233 SHA512 540bbc5210587b45df3fd5038b0671eafbe330683198661fdacd1eda10a08c4f89d7dbed6966b69154dd54a98fc5238c615bc27cff2ddee270d32fb170d2d7ef @@ -19,4 +20,5 @@ EBUILD petsc-3.19.2-r1.ebuild 7323 BLAKE2B d42ef6d5dea72728bca65edbd783ad38ed809 EBUILD petsc-3.19.4-r1.ebuild 7447 BLAKE2B 25b7431319effec19012133dd480cc76309206f3de7789262fc09d2724cde19dcdc9ae86a40432fa40dc6b927c49e445d5e67c010e5e47eee1c27aa8db8510b2 SHA512 835ef674e227720e47e86165143b3b55d79694c9424b666f94a9191d70d2f435acd5d4f0aada1765520194eb97126e064b49c71a2efaf90775a867eec9a49acd EBUILD petsc-3.20.5-r1.ebuild 7460 BLAKE2B ba8adc670eb453336766c670caa28fd1130f10eb222bc1aafa3e69e616288059908ff845d3a290f71f65d6011f82f0d94c4ba87d79a298b80f17035575ead102 SHA512 89db7fbeda8e15bac7194b84f07a0a12f85d2916be9ba45d5ae64e389fd9dd39233611bab424b8916be2a55569409afd08bd8efb830b422bd18347d16e9cc428 EBUILD petsc-3.21.3.ebuild 7321 BLAKE2B 60cbd5eb826775ff9632a2e2f1861d905b3fa717739cfb4d4a734392cf369422f62900253a31caf0d5c8e86807c9beb2a66a34e03d45b6e42b791830bb0e7af4 SHA512 3c5fd8d0bf86d0f23c9e460b33b562591957dc1844805cb6486813142fde8fdcb7ef4bb20bb01260c99e65ea06fc318962b34ac1ad6f07096d403f24739dd574 +EBUILD petsc-3.22.2.ebuild 7337 BLAKE2B 1c7239f4b6255678b51cf8d0c7a6997a66b4955501c98a28dde0f7f9d86f40e5469a414920e95f1e3613d9c7cb81e1e7c3845a3e18d0626848779f5137a8694a SHA512 9f358c1f3c61e888e1c72ae82158f619faa674897f32f29ccdd740e77238f28a403e47223fcb39fb3370977a25a0181bce82d17d92c2f55151a400890b173903 MISC metadata.xml 1310 BLAKE2B 04161c348ae88640222ad8d6c3f3471defbfdc0adc223acc6e8d0d21f62090b62f2887caacae5de751cb4b1ddb1e0d4bb4de5ea57d9381c710837262668fc37b SHA512 327aa86d4dba087c0de4ab7e2099bf8df13f2eb04138207802f664c316b74c09b2b15f82e9766b6b713d530f3ee094844f490c4769a1b5719f4912b486156ba9 diff --git a/sci-mathematics/petsc/petsc-3.22.2.ebuild b/sci-mathematics/petsc/petsc-3.22.2.ebuild new file mode 100644 index 000000000000..14ce5ca27f1b --- /dev/null +++ b/sci-mathematics/petsc/petsc-3.22.2.ebuild @@ -0,0 +1,235 @@ +# Copyright 1999-2024 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=8 + +PYTHON_COMPAT=( python3_{10..12} pypy3 ) + +inherit flag-o-matic fortran-2 python-any-r1 toolchain-funcs + +DESCRIPTION="Portable, Extensible Toolkit for Scientific Computation" +HOMEPAGE="https://petsc.org/release/" +SRC_URI="https://web.cels.anl.gov/projects/petsc/download/release-snapshots/${P}.tar.gz" + +LICENSE="BSD-2" +SLOT="0" +KEYWORDS="~amd64 ~x86" +IUSE="afterimage boost complex-scalars debug +examples fftw +fortran hdf5 hypre int64 mpi metis mumps scotch superlu threads X" + +# readd sparse when suitesparse-5.6.0 is in tree +# sparse? ( >=sci-libs/suitesparse-5.6.0 >=sci-libs/cholmod-1.7.0 ) +# $(use_with sparse suitesparse) \ +RDEPEND=" + virtual/blas + virtual/lapack + + afterimage? ( media-libs/libafterimage ) + boost? ( dev-libs/boost ) + fftw? ( sci-libs/fftw:3.0[mpi?] ) + hdf5? ( sci-libs/hdf5:=[mpi?] ) + hypre? ( >=sci-libs/hypre-2.18.0[int64?,mpi?] ) + metis? ( >=sci-libs/parmetis-4 ) + mpi? ( virtual/mpi[fortran?] ) + mumps? ( sci-libs/mumps[mpi?] sci-libs/scalapack ) + scotch? ( sci-libs/scotch[int64?,mpi?] ) + superlu? ( >=sci-libs/superlu-5 ) + X? ( x11-libs/libX11 ) +" +DEPEND=" + ${RDEPEND} + ${PYTHON_DEPS} +" +BDEPEND=" + dev-build/cmake + virtual/pkgconfig +" + +# hypre and superlu curretly exclude each other due to missing linking to hypre +# if both are enabled +REQUIRED_USE=" + afterimage? ( X ) + complex-scalars? ( !hypre !superlu ) + fftw? ( mpi ) + hdf5? ( mpi ) + hypre? ( mpi !superlu ) + mumps? ( mpi scotch ) + scotch? ( mpi ) + superlu? ( !hypre ) +" +PATCHES=( + "${FILESDIR}/${PN}-3.21.3-disable-rpath.patch" + "${FILESDIR}"/${PN}-3.21.3-fix_sandbox_violation.patch +) + +# petsc uses --with-blah=1 and --with-blah=0 to en/disable options +petsc_enable() { + use "$1" && echo "--with-${2:-$1}=1" || echo "--with-${2:-$1}=0" +} +# add external library: +# petsc_with use_flag libname libdir +# petsc_with use_flag libname include linking_libs +petsc_with() { + local myuse p=${2:-${1}} + if use ${1}; then + myuse="--with-${p}=1" + if [[ $# -ge 4 ]]; then + myuse="${myuse} --with-${p}-include=${EPREFIX}${3}" + shift 3 + myuse="${myuse} --with-${p}-lib=$@" + else + myuse="${myuse} --with-${p}-dir=${EPREFIX}${3:-/usr}" + fi + else + myuse="--with-${p}=0" + fi + echo ${myuse} +} + +# select between configure options depending on use flag +petsc_select() { + use "$1" && echo "--with-$2=$3" || echo "--with-$2=$4" +} + +src_configure() { + # bug 548498 + # PETSc runs mpi processes during configure that result in a sandbox + # violation by trying to open /proc/mtrr rw. This is not easy to + # mitigate because it happens in libpciaccess.so called by libhwloc.so, + # which is used by libmpi.so. + addpredict /proc/mtrr + # if mpi is built with knem support it needs /dev/knem too + addpredict /dev/knem + + # configureMPITypes with openmpi-2* insists on accessing the scaling + # governor rw. + addpredict /sys/devices/system/cpu/ + + # bug 771711 + # configureMPIEXEC and configureMPITypes access /dev/nvidiactl + addpredict /dev/nvidiactl + + # bug 810841 + addpredict /dev/kfd + + local myopt + + use debug && myopt="debug" || myopt="opt" + + # environmental variables expected by petsc during build + + export PETSC_DIR="${S}" + export PETSC_ARCH="linux-gnu-c-${myopt}" + + if use debug; then + strip-flags + filter-flags -O* + fi + + tc-export AR RANLIB + + # C Support on CXX builds is enabled if possible i.e. when not using + # complex scalars (no complex type for both available at the same time) + + econf \ + scrollOutput=1 \ + AR="${AR}" \ + CFLAGS="${CFLAGS} -fPIC" \ + CPPFLAGS="${CPPFLAGS}" \ + CXXFLAGS="${CXXFLAGS} -fPIC" \ + CXXOPTFLAGS="${CXXFLAGS} -fPIC" \ + FCFLAGS="${FCFLAGS} -fPIC" \ + FFLAGS="${FFLAGS} -fPIC" \ + LDFLAGS="${LDFLAGS}" \ + MAKEFLAGS="${MAKEFLAGS}" \ + RANLIB="${RANLIB}" \ + --prefix="${EPREFIX}/usr/$(get_libdir)/petscdir/" \ + --with-blas-lapack-lib="$($(tc-getPKG_CONFIG) --libs blas lapack)" \ + --with-cmake:BOOL=1 \ + --with-gnu-compilers \ + --with-imagemagick=0 \ + --with-petsc-arch="${PETSC_ARCH}" \ + --with-precision=double \ + --with-python=0 \ + --with-shared-libraries \ + --with-single-library \ + --with-windows-graphics=0 \ + $(petsc_enable debug debugging) \ + $(petsc_enable fortran) \ + $(petsc_enable mpi) \ + $(petsc_enable mpi mpi-compilers) \ + $(petsc_enable threads pthread) \ + $(petsc_select complex-scalars scalar-type complex real) \ + $(petsc_select mpi cc mpicc $(tc-getCC)) \ + $(petsc_select mpi cxx mpicxx $(tc-getCXX)) \ + $(petsc_with afterimage afterimage /usr/include/libAfterImage -lAfterImage) \ + $(petsc_with hypre hypre /usr/include/hypre -lHYPRE) \ + $(petsc_with superlu superlu /usr/include/superlu -lsuperlu) \ + $(petsc_with scotch ptscotch /usr/include/scotch [-lptesmumps,-lptscotch,-lptscotcherr,-lscotch,-lscotcherr]) \ + $(petsc_with mumps scalapack /usr/include/scalapack -lscalapack) \ + $(petsc_with mumps mumps /usr/include [-lcmumps,-ldmumps,-lsmumps,-lzmumps,-lmumps_common,-lpord]) \ + $(use fortran && echo "$(petsc_select mpi fc mpif77 $(tc-getF77))") \ + $(use int64 && echo "--with-index-size=64") \ + $(use_with boost) \ + $(use_with fftw) \ + $(use_with hdf5) \ + $(use_with X x) \ + $(use_with X x11) +} + +src_install() { + emake DESTDIR="${ED}" install + + # + # Clean up the mess: + # + + # put all include directories under a proper subdirectory + mkdir "${ED}"/usr/include || die "mkdir failed (include)" + mv "${ED}"/usr/{$(get_libdir)/petscdir/include,include/petsc} || die "mv failed (include)" + + # put libraries and pkconfig file into proper place + mv "${ED}"/usr/$(get_libdir)/petscdir/lib/{libpetsc*,pkgconfig} \ + "${ED}/usr/$(get_libdir)" || die "mv failed (lib)" + + # move share to proper location + mv "${ED}"/usr/{$(get_libdir)/petscdir/share,share} || die "mv failed (share)" + + # fix pc files: + sed -i \ + -e 's#include$#include/petsc#' \ + -e "s#lib\$#$(get_libdir)#" \ + -e "s#^prefix=.*petscdir\$#prefix=${EPREFIX}/usr#" \ + "${ED}"/usr/$(get_libdir)/pkgconfig/*.pc || die "sed failed (pkgconfig)" + + # recreate a "valid" petscdir: + for i in "${ED}"/usr/$(get_libdir)/*; do + [ $(basename $i) = petscdir ] && continue + ln -s "${EPREFIX}/usr/$(get_libdir)/$(basename $i)" \ + "${ED}/usr/$(get_libdir)/petscdir/lib/$(basename $i)" || die "ln failed (petscdir)" + done + ln -s "${EPREFIX}"/usr/include/petsc/ \ + "${ED}/usr/$(get_libdir)/petscdir/include" || die "ln failed (petscdir)" + mkdir "${ED}/usr/$(get_libdir)/petscdir/share" || die "mkdir fialed (petscdir)" + ln -s "${EPREFIX}"/usr/share/petsc/ \ + "${ED}/usr/$(get_libdir)/petscdir/share/petsc" || die "ln failed (petscdir)" + + # automatically symlink petsc matlab modules: + mkdir -p "${ED}"/usr/share/octave/site/m/ + ln -s "${EPREFIX}"/usr/share/petsc/matlab "${ED}"/usr/share/octave/site/m/petsc || die "ln failed (matlab)" + + if use examples; then + mkdir -p "${ED}"/usr/share/doc/${PF} || die "mkdir failed (examples)" + mv "${ED}"/usr/share/petsc/examples "${ED}"/usr/share/doc/${PF} || die "mv failed (examples)" + ln -s "${EPREFIX}"/usr/share/doc/${PF}/examples "${ED}"/usr/share/petsc/examples || die "ln failed (examples)" + docompress -x /usr/share/doc/${PF}/examples + else + rm -r "${ED}"/usr/share/petsc/examples || die "rm failed (examples)" + fi + + # add PETSC_DIR to environmental variables + cat >> 99petsc <<- EOF + PETSC_DIR=${EPREFIX}/usr/$(get_libdir)/petscdir + EOF + doenvd 99petsc +} diff --git a/sci-mathematics/slepc/Manifest b/sci-mathematics/slepc/Manifest index 935d5be5a64b..2556206d7804 100644 --- a/sci-mathematics/slepc/Manifest +++ b/sci-mathematics/slepc/Manifest @@ -5,10 +5,12 @@ DIST slepc-3.19.0.tar.gz 1803822 BLAKE2B 742cc773e649d46ff8513263ef53fe5d62f6cac DIST slepc-3.19.1.tar.gz 1804559 BLAKE2B e70d0801f84ee62409efd53b56cf57405017ee02cbc0c5484ca2aaf550f97ce8be665a360d774b69b8315dc1cdd0404535a316b6d744c7d0a6f87129c93dcf4d SHA512 a0bcbdb917e0a9606ba2bd00ee04e3016e9d5feb7e6ced069c1c57452a8661cdb57fa0d81004340367796cec91b7f9280339c7c0dfaaa0e5f839d91194dd43cb DIST slepc-3.20.1.tar.gz 1822991 BLAKE2B 5ce61d5087b2157b005170f7e441bcece4462d98120f7b731365d29c5f49dd3bc2d868f1ef70456f7cf03a499b8e1d44ba2e20c257b569e0717060bc01d2ec0d SHA512 fb1b07e72f83ff4c16c93e63e0d07fd1459c807d9995e543dd3e93e82b374be0c5a56ca2384142af8fb7302550352a4376889ecd3a80babe964d7c69ac1e500f DIST slepc-3.21.1.tar.gz 1827860 BLAKE2B 64da6b28bbea6a811972c9ec4115a44c49609a9b98524001aa53fc6bafe0dfbe0497b799204a80e387bfd9c588cc7858fce5835249e1d8d3a93d09c6d622feb8 SHA512 ee80d868fcdc9be63ebdf07020900c99d72867c5e8f1778de38bfa7890b083cbe5a03ee32a7886607bba04d42218b1f4d526b82a8b1b1f24d78f3ee4ef998db3 +DIST slepc-3.22.1.tar.gz 1867493 BLAKE2B 812ce600ef88ff6cb3933f33d5c39f36402e0980f66988d21e2401d1eddd58ae0176ca09e457bbdcee6ba45d8bca33d829090c142255b27a0a06281bb682c14d SHA512 f82c6c867a720c3c4d02187f664f3889116ea0a926ecb19bf7153a64518721f3cc0497badf93df680155463d6b5484884d2b42556aa1140b6dfaa5ef8b9db6db DIST slepc-with-docs-3.19.0.tar.gz 6320650 BLAKE2B 32d383d7ddfe6cf21755fcae768517830076d38ef4c0d844c0a4270194de541a32849883d951f1a47d98491be05866b415de3ca6148b9d9cdf0bfc5e6487234e SHA512 48695c8449a323755a5d8bd3e88560e72ef82a48d0d1150e2a751a323db02836b76666bbaea3bb44c9a79b900a93337f6ced12aba6cfd939a7c1edae49f17e71 DIST slepc-with-docs-3.19.1.tar.gz 6325794 BLAKE2B 45f33632b2096df5b25a910da33307bf1b3023949068cc84dda091a6fd142a8dc155c4d81e500dde05c3e852f87165b9cf72cdd1844a5fa7da554fe5a7740fea SHA512 5d886f05e6e21f7344391aacb892ae44cc5ac6f2144e9738fa318aab3724c010e51c968f242b5a19988e362f6f5a9d28a57fe4a4749a18be928ad458b3583936 DIST slepc-with-docs-3.20.1.tar.gz 6381729 BLAKE2B 857e3827319258809691b1abd16a1686a8eb8b435495bcc25588b01fc369e4aad87060687d16030221524a08aa52f666e093471e0d7bca23c32dd2e3a3589dd1 SHA512 70869e9dcfdb63df62e63f6b69297e989a42e38116b525fbef3a75962b968cdccbc8bf17f7b1e74de910f1e66b704a9e36b2ffd1ae924d3279d80969d75f9f97 DIST slepc-with-docs-3.21.1.tar.gz 6379594 BLAKE2B 96f544bfa5c378c65192e2ea9885939a66f254f1a92ac0bf51b118971171bc9de23307a95dc5505b8177fd5dc8c2c694ceb77f3dac9c65df6338dc8f0c4fce4c SHA512 6c110664aec40721a1cd787d922ad46d0cd5c03762cd29cfd13491656ffeebb8068ac7a0d81946dee74645886a9230134f161ce50f714c705fb3edf9afd63a16 +DIST slepc-with-docs-3.22.1.tar.gz 6492734 BLAKE2B d019dc15bb27e82579bd56c90f100787567ff18c9c78664fa26f290323af545a95b970d5bf679d0fac992b4860d4c2d2d7617d95af24cf05e875301469550585 SHA512 c46b47825a50a9f8433b7710ba8a1d43371bd7acecb41498a710fd9b1b1e4bf3f50613f22e39c2f02cd19779cadb3ffe22bc0b57b123871c0f2a19c0e9298723 EBUILD slepc-3.16.0.ebuild 1579 BLAKE2B b876abd6c282603aa9cb2cb5e8f01bee0cef210c238436e5f1a6869191fb5497a4eb8ac48e7499c3a633d8b289230d0ad850fccf67347a943a6b1bef0732b64c SHA512 447ef385070baf15329aae216584ff4aa2233ece54d557c2486b462a809002d938f0151dd397a6510ea886e04b5c56de63e013c9c21c835c1b251c2218175454 EBUILD slepc-3.17.1.ebuild 1526 BLAKE2B 60ae7829a7cb1f6777c19b85128119d2b6b43fcc9921499e74ccb38c5cf1cf409202a0caee3226ea7c0d8df3bf376badef8239dac3b97f265e8386d4f70814ff SHA512 5393dc87e56c3ba9c8c8327a3d755954cebc7f9ae08f168ef0795c676ae8d0ee1ad185fd816213015e268faeddcf20b7c01d488afb8bc620623e5869a95fea25 EBUILD slepc-3.18.1.ebuild 3423 BLAKE2B 16a5cab2a89de467db3c8f7badf6b759e0c85a14032d0936c45eda68b2484abd2f63ea9f5a91d1043637063248d64f5a88249346fd4fb084da787668c874c010 SHA512 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a5477783ed50373e8d41d42beb99f7353b132e96f2b0a0724394f7f35823db66ea526bdf08c92b619653b85c66a5712e7a9ab98486129c2704f8d3730064cc79 SHA512 802cc6ddd9cc0ef27777db2209cc246bf4dd4151a30b18d96235c90b3efabe6b3a963a605aa8a73755b6b3fb83f75e9b73a232e2b84f3f542f50f3fe66194201 +EBUILD slepc-3.22.1.ebuild 3609 BLAKE2B a5477783ed50373e8d41d42beb99f7353b132e96f2b0a0724394f7f35823db66ea526bdf08c92b619653b85c66a5712e7a9ab98486129c2704f8d3730064cc79 SHA512 802cc6ddd9cc0ef27777db2209cc246bf4dd4151a30b18d96235c90b3efabe6b3a963a605aa8a73755b6b3fb83f75e9b73a232e2b84f3f542f50f3fe66194201 MISC metadata.xml 534 BLAKE2B d69665b8748404c15776f2a3759477d0ea6ab79f7f0f33fd2199310641bfb47d96189e3479728cafd4978af9c913aaa424221a1aef42727f9af244ff9040c708 SHA512 cc16480b710ee9977bb3fd3b1e3c664b29127a5385952d41e62578d0d22c06a06a2f5194ca9fc7521d8dbbc9b1ffd53fc5e019128c62910b556f3fceefe7c8ae diff --git a/sci-mathematics/slepc/slepc-3.22.1.ebuild b/sci-mathematics/slepc/slepc-3.22.1.ebuild new file mode 100644 index 000000000000..c96091f2d520 --- /dev/null +++ b/sci-mathematics/slepc/slepc-3.22.1.ebuild @@ -0,0 +1,125 @@ +# Copyright 1999-2024 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=8 + +PYTHON_COMPAT=( python3_{10..12} ) + +inherit python-any-r1 + +DESCRIPTION="Scalable Library for Eigenvalue Problem Computations" +HOMEPAGE="https://slepc.upv.es/" +SRC_URI=" + !doc? ( https://slepc.upv.es/download/distrib/${P}.tar.gz ) + doc? ( https://slepc.upv.es/download/distrib/${PN}-with-docs-${PV}.tar.gz )" + +LICENSE="LGPL-3" +SLOT="0" +KEYWORDS="~amd64 ~x86" +IUSE="arpack complex-scalars doc +examples mpi" + +REQUIRED_USE="arpack? ( mpi )" + +RDEPEND=" + =sci-mathematics/petsc-$(ver_cut 1-2)*:=[examples,mpi=,complex-scalars=] + arpack? ( sci-libs/arpack[mpi=] ) + mpi? ( virtual/mpi ) +" + +DEPEND="${RDEPEND} + ${PYTHON_DEPS} + virtual/pkgconfig + dev-build/cmake +" + +MAKEOPTS="${MAKEOPTS} V=1" + +src_unpack() { + use doc || unpack ${P}.tar.gz + use doc && unpack ${PN}-with-docs-${PV}.tar.gz +} + +src_configure() { + # *sigh* + addpredict "${PETSC_DIR}"/.nagged + + # Make sure that the environment is set up correctly: + unset PETSC_DIR + unset PETSC_ARCH + source "${EPREFIX}"/etc/env.d/99petsc + export PETSC_DIR + export PETSC_ARCH + export SLEPC_DIR="${S}" + + # configure is a custom python script and doesn't want to have default + # configure arguments that we set with econf + if use arpack; then + ./configure \ + --prefix="${EPREFIX}/usr/$(get_libdir)/slepcdir" \ + --with-arpack=1 \ + --with-arpack-lib="$(usex mpi "-lparpack -larpack" "-larpack")" + else + ./configure \ + --prefix="${EPREFIX}/usr/$(get_libdir)/slepcdir" \ + --with-arpack=0 + fi +} + +src_install() { + emake DESTDIR="${ED}" install + + # + # Clean up the mess: + # + + # put all include directories under a proper subdirectory + mkdir "${ED}"/usr/include || die "mkdir failed (include)" + mv "${ED}"/usr/{$(get_libdir)/slepcdir/include,include/slepc} || die "mv failed (include)" + + # put libraries and pkconfig file into proper place + mv "${ED}"/usr/$(get_libdir)/slepcdir/lib/{libslepc*,pkgconfig} \ + "${ED}/usr/$(get_libdir)" || die "mv failed (lib)" + + # move share to proper location + mv "${ED}"/usr/{$(get_libdir)/slepcdir/share,share} || die "mv failed (share)" + + # fix pc files: + sed -i \ + -e 's#include$#include/slepc#' \ + -e "s#lib\$#$(get_libdir)#" \ + -e "s#^prefix=.*slepcdir\$#prefix=${EPREFIX}/usr#" \ + "${ED}"/usr/$(get_libdir)/pkgconfig/*.pc || die "sed failed (pkgconfig)" + + # recreate a "valid" slepcdir: + for i in "${ED}"/usr/$(get_libdir)/*; do + [ $(basename $i) = slepcdir ] && continue + ln -s "${EPREFIX}/usr/$(get_libdir)/$(basename $i)" \ + "${ED}/usr/$(get_libdir)/slepcdir/lib/$(basename $i)" || die "ln failed (slepcdir)" + done + ln -s "${EPREFIX}"/usr/include/slepc/ \ + "${ED}/usr/$(get_libdir)/slepcdir/include" || die "ln failed (slepcdir)" + mkdir "${ED}/usr/$(get_libdir)/slepcdir/share" || die "mkdir fialed (slepcdir)" + ln -s "${EPREFIX}"/usr/share/slepc/ \ + "${ED}/usr/$(get_libdir)/slepcdir/share/slepc" || die "ln failed (slepcdir)" + + if use examples; then + mkdir -p "${ED}"/usr/share/doc/${PF} || die "mkdir failed (examples)" + mv "${ED}"/usr/share/slepc/examples "${ED}"/usr/share/doc/${PF} || die "mv failed (examples)" + ln -s "${EPREFIX}"/usr/share/doc/${PF}/examples "${ED}"/usr/share/slepc/examples || die "ln failed (examples)" + docompress -x /usr/share/doc/${PF}/examples + else + rm -r "${ED}"/usr/share/slepc/examples || die "rm failed (examples)" + fi + + if use doc ; then + dodoc docs/slepc.pdf + docinto html + dodoc -r docs/*.html docs/manualpages + fi + + # add PETSC_DIR to environmental variables + cat >> 99slepc <<- EOF + SLEPC_DIR=${EPREFIX}/usr/$(get_libdir)/slepcdir + EOF + doenvd 99slepc +} |