gentoo resync : 25.05.2018

3 files changed, 302 insertions, 0 deletions

diff --git a/sci-visualization/paraview/Manifest b/sci-visualization/paraview/Manifest
index 12330ae28164..ca610b3c8f59 100644
--- a/sci-visualization/paraview/Manifest
+++ b/sci-visualization/paraview/Manifest
@@ -1,8 +1,11 @@
 AUX paraview-4.0.1-xdmf-cstring.patch 360 BLAKE2B 919de8333b22125dd1122987f780ad65594982f4fd403c45a80ae1294d1acb11cda61adc8c62f97243651679b044130e94850ecd9e06f26da1c538268fd02ba8 SHA512 5577b7bae26959546795721d712c4e4f6a5403b35c0871040f6c74c07cd3aecd5b03e9f7a07ef49714b8adb4c7cc880385215b8742895006d2ad3dfeccc50472
 AUX paraview-5.3.0-fix_buildsystem.patch 797 BLAKE2B f77c72f34c13eae42a4da281f954808f7db47c7765b9084a99d2e0ea6297d30092d1b3dae7ab26df7ac1e4de6559805748c0994853e2ad34c0f8f639ce732b12 SHA512 18526dc29219fd8dbc3679920ce271977cfb153a51cf217d49ba544510da23ee02f57b3ee9450ad9ee421d272a18fecdf3bd5043225cc16d04a2b115f62ce1f0
 AUX paraview-5.4.1-jsoncpp_1.8.4.patch 787 BLAKE2B 1978d56feb0d25fb4730dac0138803327984c4a7defee2921a9d42ba69a75788d3b5abde03c99c33024e3c89de71b93f24d3ba2a60011a24445919f16824fbf4 SHA512 9ffd209bfc5de42e6100669614771a20c904b809cea7beda90709b5b2e2c36a533ab3474495d6f6e6e7141d033e2cc53ff1dfc241287eadfb13996b7a123eadf
+AUX paraview-5.5.0-allow_custom_build_type.patch 1036 BLAKE2B ff00093034196935e9075c5751f8a64027da009679de5c3f5b941681e65df9b91b0a05a3f0201a873313d859f029596739b1c5d705a1c35ae3cc83251312774e SHA512 0c79315d28b98d4cf45bfd48198dbb3315ebf6ffbd05e9720b35e7bdea05bd98c086dbb02cd7ac6d9580f504c7d29f498244d2b30d9e2932e881261a78b020c7
 DIST ParaView-v5.3.0.tar.gz 45173528 BLAKE2B 878e8dae0b5de4bee5d72a4a272a5048fa587fac8e949d39c8e040b9fe3553b787e53f183ae98d20f24755db7e355280b85a9f572037764c53740de2eb4a9e30 SHA512 3dc3c2a1c27a0f0dc82fc04ce84477a26aacb329d6ea42c276c4204e39d11bc78adbc1807e1e7168aade31aa48b6d628775841b8b94b5122084eac46e358a23f
 DIST ParaView-v5.4.1.tar.gz 43783720 BLAKE2B 2197d7f390b7192eb58ad67b88c84119da35fc4229547a42ef12a600874304addb410d0a53684a785855f617011762bf6a819231821f0bff8ee226111df8e577 SHA512 6a720f9ed9e03b7b97f0e84bb6d67b2a28c4ffc5079427d544e9522ce313264eed273c9b7ae13b11e34ab4de903132a22bacc337452d1e9da9876416449520f5
+DIST ParaView-v5.5.0.tar.gz 51414419 BLAKE2B 832a01701d21f463c07186912501796756c2477063803fa3b2b67dbb9ac2c9db28a45a8b3d22077085255adf16eb429c3289093848b3712ebab46c0ae4c17956 SHA512 0915eac75a710736334fa9d436369a14546e2f90a1b55f9a0f7a96fedb94ced043d27576d2a179f275478be17e326cd3bee76f06266a776d586f6510722f3172
 EBUILD paraview-5.3.0.ebuild 9230 BLAKE2B c65d17b150e9a9aacaa9a98331556d06422140cde16a066df2ae2107fe35fd445d6f6b427b6cee9a7cbcbb21c7ea451a6973079490bc473e1cd981c4ea81cace SHA512 7d8ea25c399d2951b3892d50c429cf136a5c9d7be199a0b55978d1ee3dc0228298ba79e69f57358e3cce9517804e509d6680ba700552e1f86e277693164c6cec
 EBUILD paraview-5.4.1.ebuild 8162 BLAKE2B e5ac791d2e598f6f18b238bcc2ddc73677ef7a73e0094880b7df3b80084a92025e463eee46ae3d9f7438117c351f46804f845bd163c4172d3e09a424064f2aa2 SHA512 f2e4c0939dfe6b3413d4d6683c21793ad3449061c0b7f867f5e9999e319fa1f97b1e9b86c112789adbcd997fa7df28c01da0c7f2f8d1b46656a5cd27687ec703
+EBUILD paraview-5.5.0.ebuild 8194 BLAKE2B e3f53fb059f93f9c6a8f772be48b5714d51a97c6b7ef01e0973025e37740ba8c02d595d6da6f87464e2af0f9ce157e0d794380c312a149b522a779a6f7c25720 SHA512 b3101948d94bb693b78ba84ba75992022dc0e967c065e4b4011a55be3ec0f90720310d6e899c847856b225ea1e9c9e554ea396045dad51cc3451bc41f8a49ba6
 MISC metadata.xml 748 BLAKE2B 25046c08c0a8df768efba10cae82ef24d583776d21ddda5fd65f895e11214ca9745205458f27e96f45d83fd0d6e77d5f2c12653206eaef09f398fa7a9275418e SHA512 5354c12b5448883903bca724a5d3adfc1cccf352d378317f7ab43f3e4125e2329d9477081eff7e37c8602aaba2aa6df0c73a240d409541017555920f57847d65
diff --git a/sci-visualization/paraview/files/paraview-5.5.0-allow_custom_build_type.patch b/sci-visualization/paraview/files/paraview-5.5.0-allow_custom_build_type.patch
new file mode 100644
index 000000000000..1549e58af865
--- /dev/null
+++ b/sci-visualization/paraview/files/paraview-5.5.0-allow_custom_build_type.patch
@@ -0,0 +1,18 @@
+diff -urNd ParaView-v5.5.0/VTK/ThirdParty/eigen/vtkeigen/CMakeLists.txt ParaView-v5.5.0-fix/VTK/ThirdParty/eigen/vtkeigen/CMakeLists.txt
+--- ParaView-v5.5.0/VTK/ThirdParty/eigen/vtkeigen/CMakeLists.txt	2018-04-07 06:03:33.000000000 +1000
++++ ParaView-v5.5.0-fix/VTK/ThirdParty/eigen/vtkeigen/CMakeLists.txt	2018-04-10 16:19:08.841144557 +1000
+@@ -21,14 +21,6 @@
+   set(CMAKE_BUILD_TYPE "Release")
+ endif()
+ 
+-string(TOLOWER "${CMAKE_BUILD_TYPE}" cmake_build_type_tolower)
+-if(    NOT cmake_build_type_tolower STREQUAL "debug"
+-   AND NOT cmake_build_type_tolower STREQUAL "release"
+-   AND NOT cmake_build_type_tolower STREQUAL "relwithdebinfo")
+-  message(FATAL_ERROR "Unknown build type \"${CMAKE_BUILD_TYPE}\". Allowed values are Debug, Release, RelWithDebInfo (case-insensitive).")
+-endif()
+-
+-
+ #############################################################################
+ # retrieve version infomation                                               #
+ #############################################################################
diff --git a/sci-visualization/paraview/paraview-5.5.0.ebuild b/sci-visualization/paraview/paraview-5.5.0.ebuild
new file mode 100644
index 000000000000..580afbbb19fb
--- /dev/null
+++ b/sci-visualization/paraview/paraview-5.5.0.ebuild
@@ -0,0 +1,281 @@
+# Copyright 1999-2018 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=6
+
+PYTHON_COMPAT=( python2_7 )
+inherit eutils cmake-utils multilib python-single-r1 toolchain-funcs versionator
+
+MAIN_PV=$(get_major_version)
+MAJOR_PV=$(get_version_component_range 1-2)
+MY_P="ParaView-v${PV}"
+
+DESCRIPTION="ParaView is a powerful scientific data visualization application"
+HOMEPAGE="http://www.paraview.org"
+SRC_URI="http://www.paraview.org/files/v${MAJOR_PV}/${MY_P}.tar.gz"
+RESTRICT="mirror"
+
+LICENSE="paraview GPL-2"
+KEYWORDS="~amd64 ~x86"
+SLOT="0"
+IUSE="boost cg coprocessing development doc examples ffmpeg mpi mysql nvcontrol openmp plugins python +qt5 sqlite tcl test tk"
+RESTRICT="test"
+
+REQUIRED_USE="python? ( mpi ${PYTHON_REQUIRED_USE} )
+	mysql? ( sqlite )" # "vtksqlite, needed by vtkIOSQL" and "vtkIOSQL, needed by vtkIOMySQL"
+
+RDEPEND="
+	app-arch/lz4
+	dev-libs/expat
+	dev-libs/jsoncpp
+	dev-libs/libxml2:2
+	dev-libs/protobuf
+	dev-libs/pugixml
+	media-libs/freetype
+	media-libs/glew:0
+	media-libs/libpng:0
+	media-libs/libtheora
+	media-libs/tiff:0=
+	sci-libs/cgnslib
+	sci-libs/hdf5[mpi=]
+	>=sci-libs/netcdf-4.2[hdf5]
+	>=sci-libs/netcdf-cxx-4.2:3
+	sci-libs/xdmf2
+	sys-libs/zlib
+	virtual/glu
+	virtual/jpeg:0
+	virtual/opengl
+	x11-libs/libX11
+	x11-libs/libXext
+	x11-libs/libXmu
+	x11-libs/libXt
+	coprocessing? (
+		plugins? (
+			dev-python/PyQt5
+			dev-qt/qtgui:5[-gles2]
+		)
+	)
+	ffmpeg? ( virtual/ffmpeg )
+	mpi? ( virtual/mpi[cxx,romio] )
+	mysql? ( virtual/mysql )
+	python? (
+		${PYTHON_DEPS}
+		dev-python/constantly[${PYTHON_USEDEP}]
+		dev-python/incremental[${PYTHON_USEDEP}]
+		dev-python/matplotlib[${PYTHON_USEDEP}]
+		dev-python/numpy[${PYTHON_USEDEP}]
+		dev-python/pygments[${PYTHON_USEDEP}]
+		dev-python/sip[${PYTHON_USEDEP}]
+		dev-python/six[${PYTHON_USEDEP}]
+		dev-python/twisted-core[${PYTHON_USEDEP}]
+		dev-python/zope-interface[${PYTHON_USEDEP}]
+		mpi? ( dev-python/mpi4py )
+		qt5? ( dev-python/PyQt5[opengl,webkit,${PYTHON_USEDEP}] )
+	)
+	qt5? (
+		dev-qt/designer:5
+		dev-qt/qtgui:5[-gles2]
+		dev-qt/qthelp:5
+		dev-qt/qtopengl:5[-gles2]
+		dev-qt/qtsql:5
+		dev-qt/qttest:5
+		dev-qt/qtwebkit:5
+		dev-qt/qtx11extras:5
+	)
+	sqlite? ( dev-db/sqlite:3 )
+	tcl? ( dev-lang/tcl:0= )
+	tk? ( dev-lang/tk:0= )"
+DEPEND="${RDEPEND}
+	${PYTHON_DEPS}
+	>=dev-util/cmake-3.4
+	boost? ( >=dev-libs/boost-1.40.0[mpi?,${PYTHON_USEDEP}] )
+	doc? ( app-doc/doxygen )"
+
+S="${WORKDIR}/${MY_P}"
+
+PATCHES=(
+	"${FILESDIR}"/${PN}-4.0.1-xdmf-cstring.patch
+	"${FILESDIR}"/${PN}-5.3.0-fix_buildsystem.patch
+	"${FILESDIR}"/${PN}-5.5.0-allow_custom_build_type.patch
+)
+
+pkg_pretend() {
+	if [[ ${MERGE_TYPE} != "binary" ]] && use openmp && [[ $(tc-getCC)$ == *gcc* ]] && ! tc-has-openmp; then
+		eerror "For USE=openmp a gcc with openmp support is required"
+		eerror
+		return 1
+	fi
+}
+
+pkg_setup() {
+	python-single-r1_pkg_setup
+	PVLIBDIR=$(get_libdir)/${PN}-${MAJOR_PV}
+}
+
+src_prepare() {
+	cmake-utils_src_prepare
+
+	# lib64 fixes
+	sed -i \
+		-e "s:/lib/python:/$(get_libdir)/python:g" \
+		VTK/ThirdParty/xdmf3/vtkxdmf3/CMakeLists.txt || die
+	sed -i \
+		-e "s:lib/paraview-:$(get_libdir)/paraview-:g" \
+		ParaViewCore/ServerManager/SMApplication/vtkInitializationHelper.cxx || die
+}
+
+src_configure() {
+	if use qt5; then
+		export QT_SELECT=qt5
+	fi
+
+	local mycmakeargs=(
+		-DCMAKE_INSTALL_LIBDIR="${PVLIBDIR}"
+		-DCMAKE_INSTALL_PREFIX="${EPREFIX}"/usr
+		-DEXPAT_INCLUDE_DIR="${EPREFIX}"/usr/include
+		-DEXPAT_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libexpat.so
+		-DOPENGL_gl_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libGL.so
+		-DOPENGL_glu_LIBRARY="${EPREFIX}"/usr/$(get_libdir)/libGLU.so
+		-DBUILD_SHARED_LIBS=ON
+		-DCMAKE_COLOR_MAKEFILE=TRUE
+		-DCMAKE_VERBOSE_MAKEFILE=ON
+		-DVTK_Group_StandAlone=ON
+		-DVTK_RENDERING_BACKEND=OpenGL2
+		-DVTK_USE_FFMPEG_ENCODER=OFF
+		-DVTK_USE_OFFSCREEN=TRUE
+		# -DVTK_USE_SYSTEM_AUTOBAHN once we transitioned to Python 3...
+		-DVTK_USE_SYSTEM_CGNS=ON
+		-DVTK_USE_SYSTEM_PUGIXML=ON
+		-DVTK_USE_SYSTEM_EXPAT=ON
+		-DVTK_USE_SYSTEM_FREETYPE=ON
+		-DVTK_USE_SYSTEM_GL2PS=OFF # doesn't compile, requires modified sources
+		-DVTK_USE_SYSTEM_GLEW=ON
+		-DVTK_USE_SYSTEM_HDF5=ON
+		-DVTK_USE_SYSTEM_INCREMENTAL=ON
+		-DVTK_USE_SYSTEM_JPEG=ON
+		-DVTK_USE_SYSTEM_JSONCPP=ON
+		-DVTK_USE_SYSTEM_LIBHARU=OFF # doesn't compile, requires modified sources
+		-DVTK_USE_SYSTEM_LIBXML2=ON
+		-DVTK_USE_SYSTEM_LZ4=ON
+		-DVTK_USE_SYSTEM_NETCDF=ON
+		-DVTK_USE_SYSTEM_OGGTHEORA=ON
+		-DVTK_USE_SYSTEM_PNG=ON
+		-DVTK_USE_SYSTEM_PROTOBUF=ON
+		-DVTK_USE_SYSTEM_TIFF=ON
+		-DVTK_USE_SYSTEM_XDMF2=ON
+		-DVTK_USE_SYSTEM_XDMF2=OFF
+		-DVTK_USE_SYSTEM_ZLIB=ON
+		# force this module due to incorrect build system deps
+		# wrt bug 460528
+		-DModule_vtkUtilitiesProcessXML=ON
+		)
+
+	mycmakeargs+=(
+		-DPARAVIEW_INSTALL_DEVELOPMENT_FILES="$(usex development)"
+
+		-DModule_vtkGUISupportQtOpenGL="$(usex qt5)"
+		-DModule_vtkGUISupportQtSQL="$(usex qt5)"
+		-DModule_vtkGUISupportQtWebkit="$(usex qt5)"
+		-DModule_vtkRenderingQt="$(usex qt5)"
+		-DModule_vtkViewsQt="$(usex qt5)"
+		-DPARAVIEW_BUILD_QT_GUI="$(usex qt5)"
+		-DVTK_Group_ParaViewQt="$(usex qt5)"
+		-DVTK_Group_Qt="$(usex qt5)"
+		-DModule_pqPython="$(usex qt5 "$(usex python)" "off")"
+		$(usex qt5 "-DPARAVIEW_QT_VERSION=5" "")
+		-DVTK_USE_NVCONTROL="$(usex nvcontrol)"
+
+		-DModule_vtkInfovisBoost="$(usex boost)"
+
+		-DPARAVIEW_USE_ICE_T="$(usex mpi)"
+		-DPARAVIEW_USE_MPI_SSEND="$(usex mpi)"
+		-DPARAVIEW_USE_MPI="$(usex mpi)"
+		-DVTK_Group_MPI="$(usex mpi)"
+		-DVTK_XDMF_USE_MPI="$(usex mpi)"
+		-DXDMF_BUILD_MPI="$(usex mpi)"
+
+		-DModule_AutobahnPython="$(usex python)"
+		-DModule_pqPython="$(usex python)"
+		-DModule_Twisted="$(usex python)"
+		-DModule_vtkmpi4py="$(usex python)"
+		-DModule_vtkPython="$(usex python)"
+		-DModule_vtkWrappingPythonCore="$(usex python)"
+		-DModule_ZopeInterface="$(usex python)"
+		-DPARAVIEW_ENABLE_PYTHON="$(usex python)"
+		-DXDMF_WRAP_PYTHON="$(usex python)"
+
+		-DBUILD_DOCUMENTATION="$(usex doc)"
+
+		-DBUILD_EXAMPLES="$(usex examples)"
+
+		-DModule_vtkIOMySQL="$(usex mysql)"
+
+		-DModule_vtksqlite="$(usex sqlite)"
+
+		-DPARAVIEW_ENABLE_CATALYST="$(usex coprocessing)"
+
+		-DPARAVIEW_ENABLE_FFMPEG="$(usex ffmpeg)"
+		-DVTK_USE_FFMPEG_ENCODER="$(usex ffmpeg)"
+		-DModule_vtkIOFFMPEG="$(usex ffmpeg)"
+
+		-DVTK_Group_Tk="$(usex tk)"
+		-DVTK_USE_TK="$(usex tk)"
+		-DModule_vtkRenderingTk="$(usex tk)"
+		-DModule_vtkTclTk="$(usex tcl)"
+		-DModule_vtkWrappingTcl="$(usex tcl)"
+		-DBUILD_TESTING="$(usex test)"
+		)
+
+	if use openmp; then
+		mycmakeargs+=( -DVTK_SMP_IMPLEMENTATION_TYPE=OpenMP )
+	fi
+
+	# TODO: MantaView VaporPlugin VRPlugin
+	mycmakeargs+=(
+		-DPARAVIEW_BUILD_PLUGIN_AdiosReader="$(usex plugins)"
+		-DPARAVIEW_BUILD_PLUGIN_AnalyzeNIfTIIO="$(usex plugins)"
+		-DPARAVIEW_BUILD_PLUGIN_ArrowGlyph="$(usex plugins)"
+		-DPARAVIEW_BUILD_PLUGIN_EyeDomeLighting="$(usex plugins)"
+		-DPARAVIEW_BUILD_PLUGIN_GMVReader="$(usex plugins)"
+		-DPARAVIEW_BUILD_PLUGIN_Moments="$(usex plugins)"
+		-DPARAVIEW_BUILD_PLUGIN_NonOrthogonalSource="$(usex plugins)"
+		-DPARAVIEW_BUILD_PLUGIN_PacMan="$(usex plugins)"
+		-DPARAVIEW_BUILD_PLUGIN_SierraPlotTools="$(usex plugins)"
+		-DPARAVIEW_BUILD_PLUGIN_SLACTools="$(usex plugins)"
+		-DPARAVIEW_BUILD_PLUGIN_StreamingParticles="$(usex plugins)"
+		-DPARAVIEW_BUILD_PLUGIN_SurfaceLIC="$(usex plugins)"
+		# these are always needed for plugins
+		-DModule_vtkFiltersFlowPaths="$(usex plugins)"
+		-DModule_vtkPVServerManagerApplication="$(usex plugins)"
+		)
+
+	cmake-utils_src_configure
+}
+
+src_compile() {
+	cmake-utils_src_compile
+}
+
+src_install() {
+	cmake-utils_src_install
+
+	# remove wrapper binaries and put the actual executable in place
+	for i in "${ED}"/usr/bin/*; do
+		mv "${ED}"/usr/lib/"$(basename $i)" "$i" || die
+	done
+
+	# install libraries into correct directory respecting get_libdir:
+	mv "${ED}"/usr/lib "${ED}"/usr/lib_tmp || die
+	mkdir -p "${ED}"/usr/"${PVLIBDIR}" || die
+	mv "${ED}"/usr/lib_tmp/* "${ED}"/usr/"${PVLIBDIR}" || die
+	rmdir "${ED}"/usr/lib_tmp || die
+
+	# set up the environment
+	echo "LDPATH=${EPREFIX}/usr/${PVLIBDIR}" > "${T}"/40${PN} || die
+	doenvd "${T}"/40${PN}
+
+	newicon "${S}"/Applications/ParaView/pvIcon-32x32.png paraview.png
+	make_desktop_entry paraview "Paraview" paraview
+
+	use python && python_optimize "${D}"/usr/$(get_libdir)/${PN}-${MAJOR_PV}
+}