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diff --git a/licenses/Manifest.gz b/licenses/Manifest.gz
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--- a/licenses/Manifest.gz
+++ b/licenses/Manifest.gz
diff --git a/licenses/Whitehead-MIT b/licenses/Whitehead-MIT
deleted file mode 100644
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--- a/licenses/Whitehead-MIT
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@@ -1,126 +0,0 @@
-Copyright (c) 2000-2003, Whitehead Institute for Biomedical 
-Research; 2003-2006 Massachusetts Institute of Technology.
-
-Redistribution and use in source and binary forms are subject to the 
-terms of the following license agreement.
-
-----------------------------------------------------------------
-             *** (PROGRAM NAME) LICENSE AGREEMENT ***
-
-This License Agreement (the "Agreement") is made between the 
-Massachusetts Institute of Technology, a not-for-profit organization 
-and the licensing agent for the Whitehead Institute for Biomedical 
-Research ("WHITEHEAD") with a principal address at 77 Massachusetts 
-Avenue, Cambridge, MA 02139 ("M.I.T."), and the individual 
-downloading this program ("YOU"), and is effective at the date the 
-downloading is completed ("Effective Date").  WHITEHEAD and M.I.T. 
-are the owners of certain rights, title, and interest in the 
-computer program entitled (PROGRAM NAME) and related documentation, if 
-any, as they exist on the Effective Date and as can be downloaded 
-from http://www.broad.mit.edu/wga/ on the Effective Date (the 
-"Program").  YOU wish to obtain and M.I.T. agrees to grant, on its 
-own behalf and on behalf of WHITEHEAD, a non-exclusive license to 
-use and modify the program for internal research and educational 
-purposes only under the terms of the Agreement.  M.I.T. and YOU, in 
-consideration of the above, agree as follows:
-
-1. M.I.T. hereby grants to YOU, on the Effective Date, nonexclusive 
-rights to use, reproduce, modify, and display the source code and 
-executable code of the Program for internal research and educational 
-purposes only, without any rights whatsoever to redistribute the 
-program, under the terms and conditions of the Agreement.  WHITEHEAD 
-and M.I.T. retain all ownership rights in the Program, including 
-patent rights, copyrights, and licensing rights.  YOU may retain 
-ownership in Modifications created by YOU, provided that YOU hereby 
-grant to WHITEHEAD and M.I.T. a non-exclusive, royalty-free, 
-irrevocable, perpetual license to use reproduce, modify, display, 
-and distribute the source code and executable code in all such 
-Modifications.  YOU agree to forward to M.I.T. any and all 
-Modifications, sending such Modifications to: (PROGRAM NAME), Broad 
-Institute, 7 Cambridge Center, Cambridge, MA  02142, or in 
-electronic form to: wga@broad.mit.edu.  YOU shall be entitled to 
-establish all proprietary rights for itself in the Modifications, 
-provided that proper copyright attributions are maintained.  No 
-rights, express or implied, for use other than specified in this 
-Agreement are transferred.
-
-2. YOU agree to restrict the use of the Program to yourself for 
-research and educational purposes only.  YOU agree to use the 
-Program only at the site where the Program is downloaded.  YOU agree 
-that the Program will not be used as the basis of a commercial 
-software or hardware product and that the same will not be rewritten 
-in another computer language or otherwise adapted to circumvent the 
-need for obtaining a license from M.I.T. for use of the Program 
-other than as specified by this Agreement.
-
-3. The name of the Whitehead Institute, the "Broad Institute" or 
-M.I.T. may not be used to endorse or promote products derived from 
-this software.  YOU agree to acknowledge use of the Program in any 
-publication resulting from use of the Program according to academic 
-tradition.
-
-4. YOU acknowledge that title to the Program (including copyright) 
-will remain with WHITEHEAD and M.I.T. and that any copies of the 
-Program or portions of the Program made by YOU shall include 
-WHITEHEAD and M.I.T. copyright notices in the same format and 
-location as the copy received by YOU under this agreement.
-
-5. YOU accept the above materials on an "AS IS" basis. M.I.T. and 
-WHITEHEAD are under no obligation to load the Program onto YOUR 
-machines, test for proper operation, perform any debugging, make any 
-corrections, provide maintenance, provide any updates, or assist in 
-the understanding or use of the Program.  The Program is a research 
-program, and M.I.T. and WHITEHEAD do not represent that it is free 
-of errors or bugs or suitable for any particular tasks.
-
-6. YOU AGREE THAT THE RIGHTS GRANTED HEREUNDER ARE MADE AVAILABLE 
-WITHOUT WARRANTY OF ANY KIND, EXPRESSED OR IMPLIED, INCLUDING, BUT 
-NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY OR FITNESS 
-FOR A PARTICULAR PURPOSE, AND FURTHER INCLUDING NO WARRANTY AS TO 
-CONFORMITY WITH WHATEVER USER MANUALS OR OTHER LITERATURE MAY BE 
-ISSUED FROM TIME TO TIME.  NOTHING IN THIS AGREEMENT SHALL BE 
-CONSTRUED AS A REPRESENTATION MADE OR WARRANTY GIVEN BY M.I.T. OR 
-WHITEHEAD THAT THE PRACTICE BY YOU OF THE LICENSE GRANTED HEREUNDER 
-SHALL NOT INFRINGE THE PATENT RIGHTS, COPYRIGHTS, OR OTHER 
-INTELLECTUAL PROPERTY RIGHTS OF M.I.T., WHITEHEAD, OR ANY THIRD 
-PARTY.
-
-IN NO EVENT SHALL M.I.T., WHITEHEAD, OR THEIR RESPECTIVE TRUSTEES, 
-DIRECTORS, OFFICERS, EMPLOYEES, AGENTS AND ASSOCIATES BE LIABLE FOR 
-INCIDENTAL OR CONSEQUENTIAL DAMAGES OF ANY KIND, INCLUDING ECONOMIC 
-DAMAGE OR INJURY TO PROPERTY AND LOST PROFITS, REGARDLESS OF WHETHER 
-M.I.T. OR WHITEHEAD SHALL BE ADVISED, SHALL HAVE OTHER REASON TO 
-KNOW, OR IN FACT SHALL KNOW OF THE POSSIBILITY.
-
-7. To the extent allowed by law, YOU shall at all times during the 
-term of this Agreement and thereafter, indemnify, defend and hold 
-harmless M.I.T., WHITEHEAD, and their respective trustees, 
-directors, officers, employees, agents and affiliates, against all 
-claims, proceedings, demands, and liabilities of any kind 
-whatsoever, including legal expenses and reasonable attorneys fees, 
-arising out of, connected with, resulting from or sustained as a 
-result of use of the Program by YOU.  In no event shall M.I.T. or 
-WHITEHEAD be liable for special, direct, indirect or consequential 
-damages, losses, costs, charges, claims, demands, fees, or expenses 
-of any nature or kind.
-
-8. This Agreement shall be construed, governed, interpreted, and 
-applied in accordance with the laws of the Commonwealth of 
-Massachusetts, U.S.A.
-
-9. The term of this Agreement is one year (the "Term").  At the end 
-of the Term, the Agreement shall be automatically renewed under the 
-same terms and conditions unless M.I.T. indicates otherwise.  M.I.T. 
-shall have the right to terminate this Agreement for any reason by 
-giving thirty (30) days written notice to YOU.  Upon termination for 
-any reason, YOU agree to destroy the original and all copies, 
-including partial copies, of the Program.
-
-10. The parties agree that this Agreement is the entire Agreement, 
-and shall not be subject to any change or modification except in 
-writing by both parties.
-
-11. The provisions of this Agreement are severable, and if any 
-provisions of this Agreement are determined to be invalid or 
-unenforceable, such determination shall not in any way affect the 
-validity or enforceability of the remaining provisions.