diff options
Diffstat (limited to 'metadata/md5-cache/sci-biology')
47 files changed, 46 insertions, 46 deletions
diff --git a/metadata/md5-cache/sci-biology/Manifest.gz b/metadata/md5-cache/sci-biology/Manifest.gz Binary files differindex 3cabc7d5d726..950dec8b76f0 100644 --- a/metadata/md5-cache/sci-biology/Manifest.gz +++ b/metadata/md5-cache/sci-biology/Manifest.gz diff --git a/metadata/md5-cache/sci-biology/abyss-2.3.4 b/metadata/md5-cache/sci-biology/abyss-2.3.4 index ae1df04ac8cd..9c2907e1bd86 100644 --- a/metadata/md5-cache/sci-biology/abyss-2.3.4 +++ b/metadata/md5-cache/sci-biology/abyss-2.3.4 @@ -11,5 +11,5 @@ LICENSE=GPL-3 RDEPEND=dev-cpp/sparsehash dev-libs/boost:= misc-haskell? ( dev-libs/gmp:0= dev-libs/libffi:0= ) sys-cluster/openmpi dev-db/sqlite:3 SLOT=0 SRC_URI=https://github.com/bcgsc/abyss/archive/2.3.4.tar.gz -> abyss-2.3.4.tar.gz -_eclasses_=autotools f20ecf7ab0a7c34e83238b3ed4aaf6d6 flag-o-matic 16d3941ed2dc39f4819368ae51bc0b72 gnuconfig ddeb9f8caff1b5f71a09c75b7534df79 libtool c81bd096be5f4c82f4e8f156ef112402 multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 +_eclasses_=autotools f20ecf7ab0a7c34e83238b3ed4aaf6d6 flag-o-matic e8de74bac929ba17427e740e95707d00 gnuconfig ddeb9f8caff1b5f71a09c75b7534df79 libtool c81bd096be5f4c82f4e8f156ef112402 multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 _md5_=498079fc466ad15118faea6d1635cce8 diff --git a/metadata/md5-cache/sci-biology/bamtools-2.5.2 b/metadata/md5-cache/sci-biology/bamtools-2.5.2 index 827d0b526b89..903908e4dba1 100644 --- a/metadata/md5-cache/sci-biology/bamtools-2.5.2 +++ b/metadata/md5-cache/sci-biology/bamtools-2.5.2 @@ -10,5 +10,5 @@ LICENSE=MIT RDEPEND=>=dev-libs/jsoncpp-1.8.0:= sys-libs/zlib:= SLOT=0/2.5.2 SRC_URI=https://github.com/pezmaster31/bamtools/archive/v2.5.2.tar.gz -> bamtools-2.5.2.tar.gz -_eclasses_=cmake c0c9c21d01b8a96d2d736c554daedc57 flag-o-matic 16d3941ed2dc39f4819368ae51bc0b72 multilib b2a329026f2e404e9e371097dda47f96 multiprocessing 1e32df7deee68372153dca65f4a7c21f ninja-utils 2df4e452cea39a9ec8fb543ce059f8d6 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 xdg-utils 42869b3c8d86a70ef3cf75165a395e09 +_eclasses_=cmake c0c9c21d01b8a96d2d736c554daedc57 flag-o-matic e8de74bac929ba17427e740e95707d00 multilib b2a329026f2e404e9e371097dda47f96 multiprocessing 1e32df7deee68372153dca65f4a7c21f ninja-utils 2df4e452cea39a9ec8fb543ce059f8d6 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 xdg-utils 42869b3c8d86a70ef3cf75165a395e09 _md5_=efdfbdbf4181a018ee9965d5c16be71f diff --git a/metadata/md5-cache/sci-biology/bamtools-9999 b/metadata/md5-cache/sci-biology/bamtools-9999 index c9587df67dd3..71a7e54b358e 100644 --- a/metadata/md5-cache/sci-biology/bamtools-9999 +++ b/metadata/md5-cache/sci-biology/bamtools-9999 @@ -9,5 +9,5 @@ LICENSE=MIT PROPERTIES=live RDEPEND=>=dev-libs/jsoncpp-1.8.0:= sys-libs/zlib:= SLOT=0/9999 -_eclasses_=cmake c0c9c21d01b8a96d2d736c554daedc57 flag-o-matic 16d3941ed2dc39f4819368ae51bc0b72 git-r3 875eb471682d3e1f18da124be97dcc81 multilib b2a329026f2e404e9e371097dda47f96 multiprocessing 1e32df7deee68372153dca65f4a7c21f ninja-utils 2df4e452cea39a9ec8fb543ce059f8d6 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 xdg-utils 42869b3c8d86a70ef3cf75165a395e09 +_eclasses_=cmake c0c9c21d01b8a96d2d736c554daedc57 flag-o-matic e8de74bac929ba17427e740e95707d00 git-r3 875eb471682d3e1f18da124be97dcc81 multilib b2a329026f2e404e9e371097dda47f96 multiprocessing 1e32df7deee68372153dca65f4a7c21f ninja-utils 2df4e452cea39a9ec8fb543ce059f8d6 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 xdg-utils 42869b3c8d86a70ef3cf75165a395e09 _md5_=a2299dc6ca850c1c25582656d7586681 diff --git a/metadata/md5-cache/sci-biology/biopython-1.85 b/metadata/md5-cache/sci-biology/biopython-1.85 index 97a310fcd4eb..367e33d48122 100644 --- a/metadata/md5-cache/sci-biology/biopython-1.85 +++ b/metadata/md5-cache/sci-biology/biopython-1.85 @@ -12,5 +12,5 @@ RDEPEND=dev-python/matplotlib[python_targets_python3_11(-)?,python_targets_pytho REQUIRED_USE=|| ( python_targets_python3_11 python_targets_python3_12 python_targets_python3_13 ) SLOT=0 SRC_URI=https://files.pythonhosted.org/packages/source/b/biopython/biopython-1.85.tar.gz -_eclasses_=distutils-r1 57cca9c4edd0e2a2591feae559933c10 flag-o-matic 16d3941ed2dc39f4819368ae51bc0b72 multibuild 4650a65187015567b4e041bb9bfdb364 multilib b2a329026f2e404e9e371097dda47f96 multiprocessing 1e32df7deee68372153dca65f4a7c21f ninja-utils 2df4e452cea39a9ec8fb543ce059f8d6 optfeature 538bce96e5589935b57e178e8635f301 out-of-source-utils dbf9e34ee8964084651e25907fa8f52c pypi ad1b21f87d117ae9bb089bdb65b8f013 python-r1 fa2daad0051275fa416115c76e53b1de python-utils-r1 b7726144f5af59e186d66746d0f513e5 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 +_eclasses_=distutils-r1 57cca9c4edd0e2a2591feae559933c10 flag-o-matic e8de74bac929ba17427e740e95707d00 multibuild 4650a65187015567b4e041bb9bfdb364 multilib b2a329026f2e404e9e371097dda47f96 multiprocessing 1e32df7deee68372153dca65f4a7c21f ninja-utils 2df4e452cea39a9ec8fb543ce059f8d6 optfeature 538bce96e5589935b57e178e8635f301 out-of-source-utils dbf9e34ee8964084651e25907fa8f52c pypi ad1b21f87d117ae9bb089bdb65b8f013 python-r1 fa2daad0051275fa416115c76e53b1de python-utils-r1 b7726144f5af59e186d66746d0f513e5 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 _md5_=28304c2c7c6c86be848c18bc468e326e diff --git a/metadata/md5-cache/sci-biology/bwa-0.7.17 b/metadata/md5-cache/sci-biology/bwa-0.7.17 index 98008bb5b8d9..57d49cc77ae6 100644 --- a/metadata/md5-cache/sci-biology/bwa-0.7.17 +++ b/metadata/md5-cache/sci-biology/bwa-0.7.17 @@ -9,5 +9,5 @@ LICENSE=GPL-3 RDEPEND=sys-libs/zlib dev-lang/perl SLOT=0 SRC_URI=https://github.com/lh3/bwa/archive/v0.7.17.tar.gz -> bwa-0.7.17.tar.gz -_eclasses_=flag-o-matic 16d3941ed2dc39f4819368ae51bc0b72 multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 +_eclasses_=flag-o-matic e8de74bac929ba17427e740e95707d00 multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 _md5_=cf5b4ce99a0c3bd8a01f1f181b402d96 diff --git a/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660-r1 b/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660-r1 index 81fbb3e1bc2e..378fe3b0c00c 100644 --- a/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/CBSTOOLS-1.0.0.660.tar.gz -> embassy-cbstools-1.0.0.660.tar.gz -_eclasses_=autotools f20ecf7ab0a7c34e83238b3ed4aaf6d6 emboss-r3 bd98b11ffc89ab4079e13e7d634fd143 flag-o-matic 16d3941ed2dc39f4819368ae51bc0b72 gnuconfig ddeb9f8caff1b5f71a09c75b7534df79 libtool c81bd096be5f4c82f4e8f156ef112402 multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 +_eclasses_=autotools f20ecf7ab0a7c34e83238b3ed4aaf6d6 emboss-r3 bd98b11ffc89ab4079e13e7d634fd143 flag-o-matic e8de74bac929ba17427e740e95707d00 gnuconfig ddeb9f8caff1b5f71a09c75b7534df79 libtool c81bd096be5f4c82f4e8f156ef112402 multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 _md5_=56469e1c3bb7c4baac8ad99638b59ff0 diff --git a/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660-r1 b/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660-r1 index 09afb334f4ce..9621df5d88f9 100644 --- a/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=sci-biology/clustal-omega dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/CLUSTALOMEGA-1.1.0.660.tar.gz -> embassy-clustalomega-1.1.0.660.tar.gz -_eclasses_=autotools f20ecf7ab0a7c34e83238b3ed4aaf6d6 emboss-r3 bd98b11ffc89ab4079e13e7d634fd143 flag-o-matic 16d3941ed2dc39f4819368ae51bc0b72 gnuconfig ddeb9f8caff1b5f71a09c75b7534df79 libtool c81bd096be5f4c82f4e8f156ef112402 multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 +_eclasses_=autotools f20ecf7ab0a7c34e83238b3ed4aaf6d6 emboss-r3 bd98b11ffc89ab4079e13e7d634fd143 flag-o-matic e8de74bac929ba17427e740e95707d00 gnuconfig ddeb9f8caff1b5f71a09c75b7534df79 libtool c81bd096be5f4c82f4e8f156ef112402 multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 _md5_=864a13621791118f794da4601dcde749 diff --git a/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660-r1 b/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660-r1 index 30c6fa8ca417..4f6b5ed0051b 100644 --- a/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMAINATRIX-0.1.660.tar.gz -> embassy-domainatrix-0.1.660.tar.gz -_eclasses_=autotools f20ecf7ab0a7c34e83238b3ed4aaf6d6 emboss-r3 bd98b11ffc89ab4079e13e7d634fd143 flag-o-matic 16d3941ed2dc39f4819368ae51bc0b72 gnuconfig ddeb9f8caff1b5f71a09c75b7534df79 libtool c81bd096be5f4c82f4e8f156ef112402 multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 +_eclasses_=autotools f20ecf7ab0a7c34e83238b3ed4aaf6d6 emboss-r3 bd98b11ffc89ab4079e13e7d634fd143 flag-o-matic e8de74bac929ba17427e740e95707d00 gnuconfig ddeb9f8caff1b5f71a09c75b7534df79 libtool c81bd096be5f4c82f4e8f156ef112402 multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 _md5_=af29c98cab7134ba05c6d874e37d95dc diff --git a/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660-r1 b/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660-r1 index 575233f6013f..6c5dcf6b84bf 100644 --- a/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMALIGN-0.1.660.tar.gz -> embassy-domalign-0.1.660.tar.gz -_eclasses_=autotools f20ecf7ab0a7c34e83238b3ed4aaf6d6 emboss-r3 bd98b11ffc89ab4079e13e7d634fd143 flag-o-matic 16d3941ed2dc39f4819368ae51bc0b72 gnuconfig ddeb9f8caff1b5f71a09c75b7534df79 libtool c81bd096be5f4c82f4e8f156ef112402 multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 +_eclasses_=autotools f20ecf7ab0a7c34e83238b3ed4aaf6d6 emboss-r3 bd98b11ffc89ab4079e13e7d634fd143 flag-o-matic e8de74bac929ba17427e740e95707d00 gnuconfig ddeb9f8caff1b5f71a09c75b7534df79 libtool c81bd096be5f4c82f4e8f156ef112402 multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 _md5_=677a5e171c80e94969c1ab9c0b55e283 diff --git a/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660-r1 b/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660-r1 index d20d42fe6f5f..5390e9f21aed 100644 --- a/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMSEARCH-0.1.660.tar.gz -> embassy-domsearch-0.1.660.tar.gz -_eclasses_=autotools f20ecf7ab0a7c34e83238b3ed4aaf6d6 emboss-r3 bd98b11ffc89ab4079e13e7d634fd143 flag-o-matic 16d3941ed2dc39f4819368ae51bc0b72 gnuconfig ddeb9f8caff1b5f71a09c75b7534df79 libtool c81bd096be5f4c82f4e8f156ef112402 multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 +_eclasses_=autotools f20ecf7ab0a7c34e83238b3ed4aaf6d6 emboss-r3 bd98b11ffc89ab4079e13e7d634fd143 flag-o-matic e8de74bac929ba17427e740e95707d00 gnuconfig ddeb9f8caff1b5f71a09c75b7534df79 libtool c81bd096be5f4c82f4e8f156ef112402 multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 _md5_=e0ca10c2776835b0cd20c1b0f0721a1a diff --git a/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660-r1 b/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660-r1 index b7d88fc33a12..f09f73f2f00a 100644 --- a/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=sys-libs/ncurses:0= dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/EMNU-1.05.660.tar.gz -> embassy-emnu-1.05.660.tar.gz -_eclasses_=autotools f20ecf7ab0a7c34e83238b3ed4aaf6d6 emboss-r3 bd98b11ffc89ab4079e13e7d634fd143 flag-o-matic 16d3941ed2dc39f4819368ae51bc0b72 gnuconfig ddeb9f8caff1b5f71a09c75b7534df79 libtool c81bd096be5f4c82f4e8f156ef112402 multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 +_eclasses_=autotools f20ecf7ab0a7c34e83238b3ed4aaf6d6 emboss-r3 bd98b11ffc89ab4079e13e7d634fd143 flag-o-matic e8de74bac929ba17427e740e95707d00 gnuconfig ddeb9f8caff1b5f71a09c75b7534df79 libtool c81bd096be5f4c82f4e8f156ef112402 multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 _md5_=a33d45b5be798e7ebfcef8c59a300c88 diff --git a/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660-r1 b/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660-r1 index 41e3fd9c9c0e..34068801ff40 100644 --- a/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/ESIM4-1.0.0.660.tar.gz -> embassy-esim4-1.0.0.660.tar.gz -_eclasses_=autotools f20ecf7ab0a7c34e83238b3ed4aaf6d6 emboss-r3 bd98b11ffc89ab4079e13e7d634fd143 flag-o-matic 16d3941ed2dc39f4819368ae51bc0b72 gnuconfig ddeb9f8caff1b5f71a09c75b7534df79 libtool c81bd096be5f4c82f4e8f156ef112402 multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 +_eclasses_=autotools f20ecf7ab0a7c34e83238b3ed4aaf6d6 emboss-r3 bd98b11ffc89ab4079e13e7d634fd143 flag-o-matic e8de74bac929ba17427e740e95707d00 gnuconfig ddeb9f8caff1b5f71a09c75b7534df79 libtool c81bd096be5f4c82f4e8f156ef112402 multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 _md5_=1dc2d8d9744e46254a4e0cd2547cd4ec diff --git a/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660-r1 b/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660-r1 index 75bb54804d81..99577ba9836f 100644 --- a/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=sci-biology/hmmer:2 dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/HMMER-2.3.2.660.tar.gz -> embassy-hmmer-2.3.2.660.tar.gz -_eclasses_=autotools f20ecf7ab0a7c34e83238b3ed4aaf6d6 emboss-r3 bd98b11ffc89ab4079e13e7d634fd143 flag-o-matic 16d3941ed2dc39f4819368ae51bc0b72 gnuconfig ddeb9f8caff1b5f71a09c75b7534df79 libtool c81bd096be5f4c82f4e8f156ef112402 multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 +_eclasses_=autotools f20ecf7ab0a7c34e83238b3ed4aaf6d6 emboss-r3 bd98b11ffc89ab4079e13e7d634fd143 flag-o-matic e8de74bac929ba17427e740e95707d00 gnuconfig ddeb9f8caff1b5f71a09c75b7534df79 libtool c81bd096be5f4c82f4e8f156ef112402 multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 _md5_=fb64fb071ec661ab550e0b33bc78b536 diff --git a/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660-r1 b/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660-r1 index 57fad0f0153d..330e5b926952 100644 --- a/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/IPRSCAN-4.3.1.660.tar.gz -> embassy-iprscan-4.3.1.660.tar.gz -_eclasses_=autotools f20ecf7ab0a7c34e83238b3ed4aaf6d6 emboss-r3 bd98b11ffc89ab4079e13e7d634fd143 flag-o-matic 16d3941ed2dc39f4819368ae51bc0b72 gnuconfig ddeb9f8caff1b5f71a09c75b7534df79 libtool c81bd096be5f4c82f4e8f156ef112402 multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 +_eclasses_=autotools f20ecf7ab0a7c34e83238b3ed4aaf6d6 emboss-r3 bd98b11ffc89ab4079e13e7d634fd143 flag-o-matic e8de74bac929ba17427e740e95707d00 gnuconfig ddeb9f8caff1b5f71a09c75b7534df79 libtool c81bd096be5f4c82f4e8f156ef112402 multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 _md5_=06b3cb4ecb53ada6b96c0f8fe91680e9 diff --git a/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660-r1 b/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660-r1 index 7a61ddbb391b..4a185dface2c 100644 --- a/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=sys-libs/ncurses:= dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/MSE-3.0.0.660.tar.gz -> embassy-mse-3.0.0.660.tar.gz -_eclasses_=autotools f20ecf7ab0a7c34e83238b3ed4aaf6d6 emboss-r3 bd98b11ffc89ab4079e13e7d634fd143 flag-o-matic 16d3941ed2dc39f4819368ae51bc0b72 gnuconfig ddeb9f8caff1b5f71a09c75b7534df79 libtool c81bd096be5f4c82f4e8f156ef112402 multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 +_eclasses_=autotools f20ecf7ab0a7c34e83238b3ed4aaf6d6 emboss-r3 bd98b11ffc89ab4079e13e7d634fd143 flag-o-matic e8de74bac929ba17427e740e95707d00 gnuconfig ddeb9f8caff1b5f71a09c75b7534df79 libtool c81bd096be5f4c82f4e8f156ef112402 multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 _md5_=86e12f8b76c4395cf8cf96c8af1aa75e diff --git a/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660-r1 b/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660-r1 index 941341250a4f..cc37217380a4 100644 --- a/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 free-noncomm RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/PHYLIPNEW-3.69.660.tar.gz -> embassy-phylipnew-3.69.660.tar.gz -_eclasses_=autotools f20ecf7ab0a7c34e83238b3ed4aaf6d6 emboss-r3 bd98b11ffc89ab4079e13e7d634fd143 flag-o-matic 16d3941ed2dc39f4819368ae51bc0b72 gnuconfig ddeb9f8caff1b5f71a09c75b7534df79 libtool c81bd096be5f4c82f4e8f156ef112402 multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 +_eclasses_=autotools f20ecf7ab0a7c34e83238b3ed4aaf6d6 emboss-r3 bd98b11ffc89ab4079e13e7d634fd143 flag-o-matic e8de74bac929ba17427e740e95707d00 gnuconfig ddeb9f8caff1b5f71a09c75b7534df79 libtool c81bd096be5f4c82f4e8f156ef112402 multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 _md5_=902706d4dbc16d2bbdc95026892ef528 diff --git a/metadata/md5-cache/sci-biology/embassy-signature-0.1.660-r1 b/metadata/md5-cache/sci-biology/embassy-signature-0.1.660-r1 index ef8fef2023ba..c5c7154206e3 100644 --- a/metadata/md5-cache/sci-biology/embassy-signature-0.1.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-signature-0.1.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/SIGNATURE-0.1.660.tar.gz -> embassy-signature-0.1.660.tar.gz -_eclasses_=autotools f20ecf7ab0a7c34e83238b3ed4aaf6d6 emboss-r3 bd98b11ffc89ab4079e13e7d634fd143 flag-o-matic 16d3941ed2dc39f4819368ae51bc0b72 gnuconfig ddeb9f8caff1b5f71a09c75b7534df79 libtool c81bd096be5f4c82f4e8f156ef112402 multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 +_eclasses_=autotools f20ecf7ab0a7c34e83238b3ed4aaf6d6 emboss-r3 bd98b11ffc89ab4079e13e7d634fd143 flag-o-matic e8de74bac929ba17427e740e95707d00 gnuconfig ddeb9f8caff1b5f71a09c75b7534df79 libtool c81bd096be5f4c82f4e8f156ef112402 multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 _md5_=193e23282bfd7f7751d7e37988a0ec44 diff --git a/metadata/md5-cache/sci-biology/embassy-structure-0.1.660-r1 b/metadata/md5-cache/sci-biology/embassy-structure-0.1.660-r1 index 12542cf1083a..09b06e96a70e 100644 --- a/metadata/md5-cache/sci-biology/embassy-structure-0.1.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-structure-0.1.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/STRUCTURE-0.1.660.tar.gz -> embassy-structure-0.1.660.tar.gz -_eclasses_=autotools f20ecf7ab0a7c34e83238b3ed4aaf6d6 emboss-r3 bd98b11ffc89ab4079e13e7d634fd143 flag-o-matic 16d3941ed2dc39f4819368ae51bc0b72 gnuconfig ddeb9f8caff1b5f71a09c75b7534df79 libtool c81bd096be5f4c82f4e8f156ef112402 multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 +_eclasses_=autotools f20ecf7ab0a7c34e83238b3ed4aaf6d6 emboss-r3 bd98b11ffc89ab4079e13e7d634fd143 flag-o-matic e8de74bac929ba17427e740e95707d00 gnuconfig ddeb9f8caff1b5f71a09c75b7534df79 libtool c81bd096be5f4c82f4e8f156ef112402 multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 _md5_=c54138383c80476f9d515e5e2a33acaf diff --git a/metadata/md5-cache/sci-biology/embassy-topo-2.0.660-r1 b/metadata/md5-cache/sci-biology/embassy-topo-2.0.660-r1 index f1b1271a8dc8..6f2db9fdbfd2 100644 --- a/metadata/md5-cache/sci-biology/embassy-topo-2.0.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-topo-2.0.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/TOPO-2.0.660.tar.gz -> embassy-topo-2.0.660.tar.gz -_eclasses_=autotools f20ecf7ab0a7c34e83238b3ed4aaf6d6 emboss-r3 bd98b11ffc89ab4079e13e7d634fd143 flag-o-matic 16d3941ed2dc39f4819368ae51bc0b72 gnuconfig ddeb9f8caff1b5f71a09c75b7534df79 libtool c81bd096be5f4c82f4e8f156ef112402 multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 +_eclasses_=autotools f20ecf7ab0a7c34e83238b3ed4aaf6d6 emboss-r3 bd98b11ffc89ab4079e13e7d634fd143 flag-o-matic e8de74bac929ba17427e740e95707d00 gnuconfig ddeb9f8caff1b5f71a09c75b7534df79 libtool c81bd096be5f4c82f4e8f156ef112402 multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 _md5_=30ddf1c7471e11d692477ffa5a3a9956 diff --git a/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660-r1 b/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660-r1 index 451aeb1ff697..152af23e4564 100644 --- a/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660-r1 +++ b/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660-r1 @@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/VIENNA-1.7.2.660.tar.gz -> embassy-vienna-1.7.2.660.tar.gz -_eclasses_=autotools f20ecf7ab0a7c34e83238b3ed4aaf6d6 emboss-r3 bd98b11ffc89ab4079e13e7d634fd143 flag-o-matic 16d3941ed2dc39f4819368ae51bc0b72 gnuconfig ddeb9f8caff1b5f71a09c75b7534df79 libtool c81bd096be5f4c82f4e8f156ef112402 multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 +_eclasses_=autotools f20ecf7ab0a7c34e83238b3ed4aaf6d6 emboss-r3 bd98b11ffc89ab4079e13e7d634fd143 flag-o-matic e8de74bac929ba17427e740e95707d00 gnuconfig ddeb9f8caff1b5f71a09c75b7534df79 libtool c81bd096be5f4c82f4e8f156ef112402 multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 _md5_=ba0cdfe4fa4ef35b15cb45a53f81f3b7 diff --git a/metadata/md5-cache/sci-biology/emboss-6.6.0-r3 b/metadata/md5-cache/sci-biology/emboss-6.6.0-r3 index f21e9ed81859..571006352036 100644 --- a/metadata/md5-cache/sci-biology/emboss-6.6.0-r3 +++ b/metadata/md5-cache/sci-biology/emboss-6.6.0-r3 @@ -12,5 +12,5 @@ PDEPEND=!minimal? ( sci-biology/aaindex sci-biology/cutg sci-biology/primer3 sci RDEPEND=!dev-build/cons !games-action/xbomber dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-6.6.0.tar.gz https://dev.gentoo.org/~soap/distfiles/emboss-6.6.0-patches-r1.tar.xz -_eclasses_=autotools f20ecf7ab0a7c34e83238b3ed4aaf6d6 emboss-r3 bd98b11ffc89ab4079e13e7d634fd143 flag-o-matic 16d3941ed2dc39f4819368ae51bc0b72 gnuconfig ddeb9f8caff1b5f71a09c75b7534df79 libtool c81bd096be5f4c82f4e8f156ef112402 multilib b2a329026f2e404e9e371097dda47f96 readme.gentoo-r1 b045f3acf546393ab6b3170781875358 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 +_eclasses_=autotools f20ecf7ab0a7c34e83238b3ed4aaf6d6 emboss-r3 bd98b11ffc89ab4079e13e7d634fd143 flag-o-matic e8de74bac929ba17427e740e95707d00 gnuconfig ddeb9f8caff1b5f71a09c75b7534df79 libtool c81bd096be5f4c82f4e8f156ef112402 multilib b2a329026f2e404e9e371097dda47f96 readme.gentoo-r1 b045f3acf546393ab6b3170781875358 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 _md5_=70b903dc25a6c63638148281283a607c diff --git a/metadata/md5-cache/sci-biology/exonerate-2.2.0-r3 b/metadata/md5-cache/sci-biology/exonerate-2.2.0-r3 index 243963396569..bd0ed56911ca 100644 --- a/metadata/md5-cache/sci-biology/exonerate-2.2.0-r3 +++ b/metadata/md5-cache/sci-biology/exonerate-2.2.0-r3 @@ -13,5 +13,5 @@ REQUIRED_USE=test? ( utils ) RESTRICT=!test? ( test ) SLOT=0 SRC_URI=https://ftp.ebi.ac.uk/pub/software/vertebrategenomics/exonerate/exonerate-2.2.0.tar.gz -_eclasses_=autotools f20ecf7ab0a7c34e83238b3ed4aaf6d6 flag-o-matic 16d3941ed2dc39f4819368ae51bc0b72 gnuconfig ddeb9f8caff1b5f71a09c75b7534df79 libtool c81bd096be5f4c82f4e8f156ef112402 multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 +_eclasses_=autotools f20ecf7ab0a7c34e83238b3ed4aaf6d6 flag-o-matic e8de74bac929ba17427e740e95707d00 gnuconfig ddeb9f8caff1b5f71a09c75b7534df79 libtool c81bd096be5f4c82f4e8f156ef112402 multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 _md5_=10bdf3d183405e86dbde847391344239 diff --git a/metadata/md5-cache/sci-biology/fasta-36.3.8h-r1 b/metadata/md5-cache/sci-biology/fasta-36.3.8h-r1 index 21893767380e..ebec67a2d524 100644 --- a/metadata/md5-cache/sci-biology/fasta-36.3.8h-r1 +++ b/metadata/md5-cache/sci-biology/fasta-36.3.8h-r1 @@ -8,5 +8,5 @@ KEYWORDS=~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux ~x64-macos LICENSE=fasta SLOT=0 SRC_URI=https://github.com/wrpearson/fasta36/archive/refs/tags/v36.3.8h_04-May-2020.tar.gz -> fasta-36.3.8h.tar.gz -_eclasses_=flag-o-matic 16d3941ed2dc39f4819368ae51bc0b72 multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 +_eclasses_=flag-o-matic e8de74bac929ba17427e740e95707d00 multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 _md5_=c7bc36e3bc5f8215ca7b7db642f34a74 diff --git a/metadata/md5-cache/sci-biology/fasta-36.3.8i b/metadata/md5-cache/sci-biology/fasta-36.3.8i index 6d4ae6f29777..03b2499bb335 100644 --- a/metadata/md5-cache/sci-biology/fasta-36.3.8i +++ b/metadata/md5-cache/sci-biology/fasta-36.3.8i @@ -8,5 +8,5 @@ KEYWORDS=~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux ~x64-macos LICENSE=fasta SLOT=0 SRC_URI=https://github.com/wrpearson/fasta36/archive/refs/tags/v36.3.8i_14-Nov-2020.tar.gz -> fasta-36.3.8i.tar.gz -_eclasses_=flag-o-matic 16d3941ed2dc39f4819368ae51bc0b72 multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 +_eclasses_=flag-o-matic e8de74bac929ba17427e740e95707d00 multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 _md5_=7b2a3e48ed98735f92318931e4613623 diff --git a/metadata/md5-cache/sci-biology/fasttree-2.1.11 b/metadata/md5-cache/sci-biology/fasttree-2.1.11 index 029a690adc1c..b48cc77a4a57 100644 --- a/metadata/md5-cache/sci-biology/fasttree-2.1.11 +++ b/metadata/md5-cache/sci-biology/fasttree-2.1.11 @@ -10,5 +10,5 @@ LICENSE=GPL-2 REQUIRED_USE=?? ( double-precision cpu_flags_x86_sse3 ) SLOT=0 SRC_URI=http://www.microbesonline.org/fasttree/FastTree-2.1.11.c http://www.microbesonline.org/fasttree/FastTreeUPGMA.c -> FastTreeUPGMA-2.1.11.c http://www.microbesonline.org/fasttree/MOTreeComparison.tar.gz -> MOTreeComparison-2.1.11.tar.gz -_eclasses_=cmake c0c9c21d01b8a96d2d736c554daedc57 flag-o-matic 16d3941ed2dc39f4819368ae51bc0b72 multilib b2a329026f2e404e9e371097dda47f96 multiprocessing 1e32df7deee68372153dca65f4a7c21f ninja-utils 2df4e452cea39a9ec8fb543ce059f8d6 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 xdg-utils 42869b3c8d86a70ef3cf75165a395e09 +_eclasses_=cmake c0c9c21d01b8a96d2d736c554daedc57 flag-o-matic e8de74bac929ba17427e740e95707d00 multilib b2a329026f2e404e9e371097dda47f96 multiprocessing 1e32df7deee68372153dca65f4a7c21f ninja-utils 2df4e452cea39a9ec8fb543ce059f8d6 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 xdg-utils 42869b3c8d86a70ef3cf75165a395e09 _md5_=4a94b8db43f0aadb5ece67757ccbe635 diff --git a/metadata/md5-cache/sci-biology/hmmer-2.3.2-r6 b/metadata/md5-cache/sci-biology/hmmer-2.3.2-r6 index 110c6f364447..7060144e32b2 100644 --- a/metadata/md5-cache/sci-biology/hmmer-2.3.2-r6 +++ b/metadata/md5-cache/sci-biology/hmmer-2.3.2-r6 @@ -10,5 +10,5 @@ LICENSE=GPL-2 RESTRICT=!test? ( test ) SLOT=2 SRC_URI=http://eddylab.org/software/hmmer/2.3.2/hmmer-2.3.2.tar.gz -_eclasses_=flag-o-matic 16d3941ed2dc39f4819368ae51bc0b72 multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 +_eclasses_=flag-o-matic e8de74bac929ba17427e740e95707d00 multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 _md5_=1fd6f0b99211b2fc58ba46d98f53bf58 diff --git a/metadata/md5-cache/sci-biology/kallisto-0.46.2-r1 b/metadata/md5-cache/sci-biology/kallisto-0.46.2-r1 index 7fd7a1867007..b09752f5d4ed 100644 --- a/metadata/md5-cache/sci-biology/kallisto-0.46.2-r1 +++ b/metadata/md5-cache/sci-biology/kallisto-0.46.2-r1 @@ -12,5 +12,5 @@ RDEPEND=sci-libs/htslib:= sys-libs/zlib:= hdf5? ( sci-libs/hdf5:= ) RESTRICT=!test? ( test ) SLOT=0 SRC_URI=https://github.com/pachterlab/kallisto/archive/v0.46.2.tar.gz -> kallisto-0.46.2.tar.gz -_eclasses_=cmake c0c9c21d01b8a96d2d736c554daedc57 flag-o-matic 16d3941ed2dc39f4819368ae51bc0b72 multilib b2a329026f2e404e9e371097dda47f96 multiprocessing 1e32df7deee68372153dca65f4a7c21f ninja-utils 2df4e452cea39a9ec8fb543ce059f8d6 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 xdg-utils 42869b3c8d86a70ef3cf75165a395e09 +_eclasses_=cmake c0c9c21d01b8a96d2d736c554daedc57 flag-o-matic e8de74bac929ba17427e740e95707d00 multilib b2a329026f2e404e9e371097dda47f96 multiprocessing 1e32df7deee68372153dca65f4a7c21f ninja-utils 2df4e452cea39a9ec8fb543ce059f8d6 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 xdg-utils 42869b3c8d86a70ef3cf75165a395e09 _md5_=910bb7d511b17acfbd0b6cd49c0fc114 diff --git a/metadata/md5-cache/sci-biology/mafft-7.490 b/metadata/md5-cache/sci-biology/mafft-7.490 index 1d6bf8e92d23..30914acb8f95 100644 --- a/metadata/md5-cache/sci-biology/mafft-7.490 +++ b/metadata/md5-cache/sci-biology/mafft-7.490 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux ~x64-macos LICENSE=BSD SLOT=0 SRC_URI=https://mafft.cbrc.jp/alignment/software/mafft-7.490-without-extensions-src.tgz -_eclasses_=flag-o-matic 16d3941ed2dc39f4819368ae51bc0b72 multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 +_eclasses_=flag-o-matic e8de74bac929ba17427e740e95707d00 multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 _md5_=04971be2bc4044a9c136d12a7e51b23d diff --git a/metadata/md5-cache/sci-biology/mosaik-2.2.30 b/metadata/md5-cache/sci-biology/mosaik-2.2.30 index 1cbd38508350..e73c8bf5dfb0 100644 --- a/metadata/md5-cache/sci-biology/mosaik-2.2.30 +++ b/metadata/md5-cache/sci-biology/mosaik-2.2.30 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=https://github.com/wanpinglee/MOSAIK/archive/5c25216d3522d6a33e53875cd76a6d65001e4e67.tar.gz -> mosaik-2.2.30.tar.gz -_eclasses_=flag-o-matic 16d3941ed2dc39f4819368ae51bc0b72 multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 vcs-snapshot bd69bf57fd2c34e99964a03b1d968177 +_eclasses_=flag-o-matic e8de74bac929ba17427e740e95707d00 multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 vcs-snapshot bd69bf57fd2c34e99964a03b1d968177 _md5_=b275a0e18dbe85d2a2e24cebc796c134 diff --git a/metadata/md5-cache/sci-biology/mothur-1.27.0-r1 b/metadata/md5-cache/sci-biology/mothur-1.27.0-r1 index 4bf12a47f940..3bf40033b5e6 100644 --- a/metadata/md5-cache/sci-biology/mothur-1.27.0-r1 +++ b/metadata/md5-cache/sci-biology/mothur-1.27.0-r1 @@ -11,5 +11,5 @@ LICENSE=GPL-3 RDEPEND=sci-biology/uchime mpi? ( virtual/mpi ) virtual/fortran SLOT=0 SRC_URI=https://www.mothur.org/w/images/c/cb/Mothur.1.27.0.zip -> mothur-1.27.0.zip -_eclasses_=flag-o-matic 16d3941ed2dc39f4819368ae51bc0b72 fortran-2 54fcb693257134adae26819685891ecc multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 +_eclasses_=flag-o-matic e8de74bac929ba17427e740e95707d00 fortran-2 54fcb693257134adae26819685891ecc multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 _md5_=4d1c6c16f8757994256f73d5be45cb8f diff --git a/metadata/md5-cache/sci-biology/mothur-1.48.0 b/metadata/md5-cache/sci-biology/mothur-1.48.0 index 18cdaa43c2e3..cf66c7b7c836 100644 --- a/metadata/md5-cache/sci-biology/mothur-1.48.0 +++ b/metadata/md5-cache/sci-biology/mothur-1.48.0 @@ -10,5 +10,5 @@ LICENSE=GPL-3 RDEPEND=sci-biology/uchime boost? ( dev-libs/boost:=[zlib] ) gsl? ( sci-libs/gsl:= ) hdf5? ( sci-libs/hdf5:=[cxx] ) mpi? ( virtual/mpi ) SLOT=0 SRC_URI=https://github.com/mothur/mothur/archive/refs/tags/v1.48.0.tar.gz -> mothur-1.48.0.tar.gz -_eclasses_=flag-o-matic 16d3941ed2dc39f4819368ae51bc0b72 multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 +_eclasses_=flag-o-matic e8de74bac929ba17427e740e95707d00 multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 _md5_=d735d18f460738ef3613462684b289f7 diff --git a/metadata/md5-cache/sci-biology/mummer-3.23-r1 b/metadata/md5-cache/sci-biology/mummer-3.23-r1 index d3bbf8204408..4745e6bbd54a 100644 --- a/metadata/md5-cache/sci-biology/mummer-3.23-r1 +++ b/metadata/md5-cache/sci-biology/mummer-3.23-r1 @@ -9,5 +9,5 @@ LICENSE=Artistic RDEPEND=app-shells/tcsh dev-lang/perl SLOT=0 SRC_URI=https://downloads.sourceforge.net/mummer/MUMmer3.23.tar.gz -_eclasses_=flag-o-matic 16d3941ed2dc39f4819368ae51bc0b72 multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 +_eclasses_=flag-o-matic e8de74bac929ba17427e740e95707d00 multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 _md5_=6c017adea5c77f3b2646f4b5947bcd7a diff --git a/metadata/md5-cache/sci-biology/muscle-3.8.31 b/metadata/md5-cache/sci-biology/muscle-3.8.31 index 78b931b05aa0..0186b35d9dc1 100644 --- a/metadata/md5-cache/sci-biology/muscle-3.8.31 +++ b/metadata/md5-cache/sci-biology/muscle-3.8.31 @@ -8,5 +8,5 @@ LICENSE=public-domain RDEPEND=!sci-libs/libmuscle SLOT=0 SRC_URI=https://www.drive5.com/muscle/downloads3.8.31/muscle3.8.31_src.tar.gz -_eclasses_=flag-o-matic 16d3941ed2dc39f4819368ae51bc0b72 multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 +_eclasses_=flag-o-matic e8de74bac929ba17427e740e95707d00 multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 _md5_=46bd2dd5a3f5b38a212ff48669d0939c diff --git a/metadata/md5-cache/sci-biology/newick-utils-1.6-r2 b/metadata/md5-cache/sci-biology/newick-utils-1.6-r2 index 3788ed5965ae..2e5b06f06071 100644 --- a/metadata/md5-cache/sci-biology/newick-utils-1.6-r2 +++ b/metadata/md5-cache/sci-biology/newick-utils-1.6-r2 @@ -11,5 +11,5 @@ LICENSE=BSD RDEPEND=xml? ( dev-libs/libxml2 ) !dev-games/libnw SLOT=0 SRC_URI=https://web.archive.org/web/20120126210029if_/http://cegg.unige.ch/pub/newick-utils-1.6.tar.gz -_eclasses_=autotools f20ecf7ab0a7c34e83238b3ed4aaf6d6 flag-o-matic 16d3941ed2dc39f4819368ae51bc0b72 gnuconfig ddeb9f8caff1b5f71a09c75b7534df79 libtool c81bd096be5f4c82f4e8f156ef112402 multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 +_eclasses_=autotools f20ecf7ab0a7c34e83238b3ed4aaf6d6 flag-o-matic e8de74bac929ba17427e740e95707d00 gnuconfig ddeb9f8caff1b5f71a09c75b7534df79 libtool c81bd096be5f4c82f4e8f156ef112402 multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 _md5_=f8324170fb990264d927dcd509f5898e diff --git a/metadata/md5-cache/sci-biology/phylip-3.698 b/metadata/md5-cache/sci-biology/phylip-3.698 index f93f3afe1db5..87100a9b0ac6 100644 --- a/metadata/md5-cache/sci-biology/phylip-3.698 +++ b/metadata/md5-cache/sci-biology/phylip-3.698 @@ -10,5 +10,5 @@ LICENSE=BSD-2 RDEPEND=x11-libs/libXaw !dev-lang/elixir SLOT=0 SRC_URI=http://evolution.gs.washington.edu/phylip/download/phylip-3.698.zip -_eclasses_=flag-o-matic 16d3941ed2dc39f4819368ae51bc0b72 multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 +_eclasses_=flag-o-matic e8de74bac929ba17427e740e95707d00 multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 _md5_=b3a777c086ea4a6cd489efcb5bde7b66 diff --git a/metadata/md5-cache/sci-biology/pysam-0.23.0 b/metadata/md5-cache/sci-biology/pysam-0.23.0 index e4ceea13d666..c3d9ee486988 100644 --- a/metadata/md5-cache/sci-biology/pysam-0.23.0 +++ b/metadata/md5-cache/sci-biology/pysam-0.23.0 @@ -13,5 +13,5 @@ REQUIRED_USE=|| ( python_targets_python3_10 python_targets_python3_11 python_tar RESTRICT=!test? ( test ) SLOT=0 SRC_URI=https://github.com/pysam-developers/pysam/archive/v0.23.0.tar.gz -> pysam-0.23.0.gh.tar.gz -_eclasses_=distutils-r1 57cca9c4edd0e2a2591feae559933c10 flag-o-matic 16d3941ed2dc39f4819368ae51bc0b72 multibuild 4650a65187015567b4e041bb9bfdb364 multilib b2a329026f2e404e9e371097dda47f96 multiprocessing 1e32df7deee68372153dca65f4a7c21f ninja-utils 2df4e452cea39a9ec8fb543ce059f8d6 out-of-source-utils dbf9e34ee8964084651e25907fa8f52c python-r1 fa2daad0051275fa416115c76e53b1de python-utils-r1 b7726144f5af59e186d66746d0f513e5 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 +_eclasses_=distutils-r1 57cca9c4edd0e2a2591feae559933c10 flag-o-matic e8de74bac929ba17427e740e95707d00 multibuild 4650a65187015567b4e041bb9bfdb364 multilib b2a329026f2e404e9e371097dda47f96 multiprocessing 1e32df7deee68372153dca65f4a7c21f ninja-utils 2df4e452cea39a9ec8fb543ce059f8d6 out-of-source-utils dbf9e34ee8964084651e25907fa8f52c python-r1 fa2daad0051275fa416115c76e53b1de python-utils-r1 b7726144f5af59e186d66746d0f513e5 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 _md5_=d9ebc3568a6c8990e691f1300e83fc2e diff --git a/metadata/md5-cache/sci-biology/pysam-9999 b/metadata/md5-cache/sci-biology/pysam-9999 index f9ad284ed39e..728d07d4907a 100644 --- a/metadata/md5-cache/sci-biology/pysam-9999 +++ b/metadata/md5-cache/sci-biology/pysam-9999 @@ -12,5 +12,5 @@ RDEPEND=>=sci-libs/htslib-1.21 python_targets_python3_10? ( dev-lang/python:3.10 REQUIRED_USE=|| ( python_targets_python3_10 python_targets_python3_11 python_targets_python3_12 python_targets_python3_13 ) RESTRICT=!test? ( test ) SLOT=0 -_eclasses_=distutils-r1 57cca9c4edd0e2a2591feae559933c10 flag-o-matic 16d3941ed2dc39f4819368ae51bc0b72 git-r3 875eb471682d3e1f18da124be97dcc81 multibuild 4650a65187015567b4e041bb9bfdb364 multilib b2a329026f2e404e9e371097dda47f96 multiprocessing 1e32df7deee68372153dca65f4a7c21f ninja-utils 2df4e452cea39a9ec8fb543ce059f8d6 out-of-source-utils dbf9e34ee8964084651e25907fa8f52c python-r1 fa2daad0051275fa416115c76e53b1de python-utils-r1 b7726144f5af59e186d66746d0f513e5 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 +_eclasses_=distutils-r1 57cca9c4edd0e2a2591feae559933c10 flag-o-matic e8de74bac929ba17427e740e95707d00 git-r3 875eb471682d3e1f18da124be97dcc81 multibuild 4650a65187015567b4e041bb9bfdb364 multilib b2a329026f2e404e9e371097dda47f96 multiprocessing 1e32df7deee68372153dca65f4a7c21f ninja-utils 2df4e452cea39a9ec8fb543ce059f8d6 out-of-source-utils dbf9e34ee8964084651e25907fa8f52c python-r1 fa2daad0051275fa416115c76e53b1de python-utils-r1 b7726144f5af59e186d66746d0f513e5 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 _md5_=ee0f3396a3881d2443c05a3426eda8b5 diff --git a/metadata/md5-cache/sci-biology/raxml-8.2.13 b/metadata/md5-cache/sci-biology/raxml-8.2.13 index b58c28166f71..0644a607d561 100644 --- a/metadata/md5-cache/sci-biology/raxml-8.2.13 +++ b/metadata/md5-cache/sci-biology/raxml-8.2.13 @@ -8,5 +8,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=https://github.com/stamatak/standard-RAxML/archive/refs/tags/v8.2.13.tar.gz -> raxml-8.2.13.tar.gz -_eclasses_=flag-o-matic 16d3941ed2dc39f4819368ae51bc0b72 multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 +_eclasses_=flag-o-matic e8de74bac929ba17427e740e95707d00 multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 _md5_=b1b4de0bedc435411038a43f078ba175 diff --git a/metadata/md5-cache/sci-biology/seqan-3.1.0 b/metadata/md5-cache/sci-biology/seqan-3.1.0 index 5cfc3fb81946..1cbf41c90e84 100644 --- a/metadata/md5-cache/sci-biology/seqan-3.1.0 +++ b/metadata/md5-cache/sci-biology/seqan-3.1.0 @@ -12,5 +12,5 @@ RDEPEND=app-arch/bzip2:= dev-cpp/range-v3 dev-libs/cereal sci-libs/lemon sys-lib REQUIRED_USE=cpu_flags_x86_sse4_2 SLOT=0 SRC_URI=https://github.com/seqan/seqan3/releases/download/3.1.0/seqan3-3.1.0-Source.tar.xz -_eclasses_=cmake c0c9c21d01b8a96d2d736c554daedc57 flag-o-matic 16d3941ed2dc39f4819368ae51bc0b72 multilib b2a329026f2e404e9e371097dda47f96 multiprocessing 1e32df7deee68372153dca65f4a7c21f ninja-utils 2df4e452cea39a9ec8fb543ce059f8d6 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 xdg-utils 42869b3c8d86a70ef3cf75165a395e09 +_eclasses_=cmake c0c9c21d01b8a96d2d736c554daedc57 flag-o-matic e8de74bac929ba17427e740e95707d00 multilib b2a329026f2e404e9e371097dda47f96 multiprocessing 1e32df7deee68372153dca65f4a7c21f ninja-utils 2df4e452cea39a9ec8fb543ce059f8d6 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 xdg-utils 42869b3c8d86a70ef3cf75165a395e09 _md5_=327a33751512d78b13d5acd641ba3385 diff --git a/metadata/md5-cache/sci-biology/t-coffee-11.00-r3 b/metadata/md5-cache/sci-biology/t-coffee-11.00-r3 index 22b389744796..bc80cc4d816c 100644 --- a/metadata/md5-cache/sci-biology/t-coffee-11.00-r3 +++ b/metadata/md5-cache/sci-biology/t-coffee-11.00-r3 @@ -8,5 +8,5 @@ LICENSE=GPL-2 RDEPEND=sci-biology/clustalw sci-chemistry/tm-align SLOT=0 SRC_URI=http://www.tcoffee.org/Packages/Beta/Latest/T-COFFEE_distribution_Version_11.00.4466924.tar.gz -_eclasses_=flag-o-matic 16d3941ed2dc39f4819368ae51bc0b72 multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 +_eclasses_=flag-o-matic e8de74bac929ba17427e740e95707d00 multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 _md5_=489f3794f3d0f3e0bf26ffb6c031578d diff --git a/metadata/md5-cache/sci-biology/treeviewx-0.5.1.20100823_p4 b/metadata/md5-cache/sci-biology/treeviewx-0.5.1.20100823_p4 index 835cee9c9186..a2b9a4dd6b68 100644 --- a/metadata/md5-cache/sci-biology/treeviewx-0.5.1.20100823_p4 +++ b/metadata/md5-cache/sci-biology/treeviewx-0.5.1.20100823_p4 @@ -11,5 +11,5 @@ LICENSE=GPL-2 RDEPEND=x11-libs/wxGTK:3.2-gtk3[X] SLOT=0 SRC_URI=https://github.com/rdmpage/treeviewx/archive/7e4d0e96dfdde51a92a1634b41d7284142a19afa.tar.gz -> treeviewx-0.5.1.20100823_p4.tar.gz mirror://debian/pool/main/t/treeviewx/treeviewx_0.5.1+git20100823.7e4d0e9-4.debian.tar.xz https://dev.gentoo.org/~pacho/treeviewx/treeviewx_128.png -_eclasses_=autotools f20ecf7ab0a7c34e83238b3ed4aaf6d6 desktop 3a72ffe0d8e1dd73af3a1c8c15a59fed flag-o-matic 16d3941ed2dc39f4819368ae51bc0b72 gnuconfig ddeb9f8caff1b5f71a09c75b7534df79 libtool c81bd096be5f4c82f4e8f156ef112402 multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 wxwidgets 9a707a3f9f1ea7aa703b1e46552291e5 xdg 3ef49a87c52c8b77c476351195dfe575 xdg-utils 42869b3c8d86a70ef3cf75165a395e09 +_eclasses_=autotools f20ecf7ab0a7c34e83238b3ed4aaf6d6 desktop 3a72ffe0d8e1dd73af3a1c8c15a59fed flag-o-matic e8de74bac929ba17427e740e95707d00 gnuconfig ddeb9f8caff1b5f71a09c75b7534df79 libtool c81bd096be5f4c82f4e8f156ef112402 multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 wxwidgets 9a707a3f9f1ea7aa703b1e46552291e5 xdg 3ef49a87c52c8b77c476351195dfe575 xdg-utils 42869b3c8d86a70ef3cf75165a395e09 _md5_=717085213272cc84290050e8716b9f37 diff --git a/metadata/md5-cache/sci-biology/trnascan-se-1.31-r3 b/metadata/md5-cache/sci-biology/trnascan-se-1.31-r3 index c4db50d26063..bf0e3ed48209 100644 --- a/metadata/md5-cache/sci-biology/trnascan-se-1.31-r3 +++ b/metadata/md5-cache/sci-biology/trnascan-se-1.31-r3 @@ -9,5 +9,5 @@ LICENSE=GPL-2 RDEPEND=dev-lang/perl:= SLOT=0 SRC_URI=http://lowelab.ucsc.edu/software/tRNAscan-SE.tar.gz -> trnascan-se-1.31.tar.gz -_eclasses_=flag-o-matic 16d3941ed2dc39f4819368ae51bc0b72 multilib b2a329026f2e404e9e371097dda47f96 perl-functions 1863acf0982afafc67797e3ce7275b4c toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 +_eclasses_=flag-o-matic e8de74bac929ba17427e740e95707d00 multilib b2a329026f2e404e9e371097dda47f96 perl-functions 1863acf0982afafc67797e3ce7275b4c toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 _md5_=52e449bd6a1f0b9bd42d7eaedfc1d9e6 diff --git a/metadata/md5-cache/sci-biology/uchime-4.2.40-r1 b/metadata/md5-cache/sci-biology/uchime-4.2.40-r1 index e48b52a22659..9bf0945e5a0c 100644 --- a/metadata/md5-cache/sci-biology/uchime-4.2.40-r1 +++ b/metadata/md5-cache/sci-biology/uchime-4.2.40-r1 @@ -8,5 +8,5 @@ KEYWORDS=amd64 ~x86 ~amd64-linux ~x86-linux LICENSE=public-domain SLOT=0 SRC_URI=https://www.drive5.com/uchime/uchime4.2.40_src.tar.gz -_eclasses_=cmake c0c9c21d01b8a96d2d736c554daedc57 flag-o-matic 16d3941ed2dc39f4819368ae51bc0b72 multilib b2a329026f2e404e9e371097dda47f96 multiprocessing 1e32df7deee68372153dca65f4a7c21f ninja-utils 2df4e452cea39a9ec8fb543ce059f8d6 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 xdg-utils 42869b3c8d86a70ef3cf75165a395e09 +_eclasses_=cmake c0c9c21d01b8a96d2d736c554daedc57 flag-o-matic e8de74bac929ba17427e740e95707d00 multilib b2a329026f2e404e9e371097dda47f96 multiprocessing 1e32df7deee68372153dca65f4a7c21f ninja-utils 2df4e452cea39a9ec8fb543ce059f8d6 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 xdg-utils 42869b3c8d86a70ef3cf75165a395e09 _md5_=d6d5b7ba215fd8eaf51d3847f4051df6 diff --git a/metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r2 b/metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r2 index 3a88c5a54312..0e68815b5ac8 100644 --- a/metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r2 +++ b/metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r2 @@ -12,5 +12,5 @@ RDEPEND=dev-libs/openssl:= media-libs/libpng:= !<sci-biology/ucsc-genome-browser REQUIRED_USE=server? ( mysql ) SLOT=0 SRC_URI=http://hgdownload.cse.ucsc.edu/admin/jksrc.v260.zip -_eclasses_=flag-o-matic 16d3941ed2dc39f4819368ae51bc0b72 multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 webapp 5fa840db95fc7348dfd53b8526ed05f5 +_eclasses_=flag-o-matic e8de74bac929ba17427e740e95707d00 multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 webapp 5fa840db95fc7348dfd53b8526ed05f5 _md5_=564b1da6740e56376a048a72b00d1f1a diff --git a/metadata/md5-cache/sci-biology/vcftools-0.1.16 b/metadata/md5-cache/sci-biology/vcftools-0.1.16 index e77906857130..be5a8a42da71 100644 --- a/metadata/md5-cache/sci-biology/vcftools-0.1.16 +++ b/metadata/md5-cache/sci-biology/vcftools-0.1.16 @@ -11,5 +11,5 @@ LICENSE=LGPL-3 RDEPEND=sys-libs/zlib dev-lang/perl:= lapack? ( virtual/lapack ) SLOT=0 SRC_URI=https://github.com/vcftools/vcftools/releases/download/v0.1.16/vcftools-0.1.16.tar.gz -_eclasses_=autotools f20ecf7ab0a7c34e83238b3ed4aaf6d6 flag-o-matic 16d3941ed2dc39f4819368ae51bc0b72 gnuconfig ddeb9f8caff1b5f71a09c75b7534df79 libtool c81bd096be5f4c82f4e8f156ef112402 multilib b2a329026f2e404e9e371097dda47f96 perl-functions 1863acf0982afafc67797e3ce7275b4c toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 +_eclasses_=autotools f20ecf7ab0a7c34e83238b3ed4aaf6d6 flag-o-matic e8de74bac929ba17427e740e95707d00 gnuconfig ddeb9f8caff1b5f71a09c75b7534df79 libtool c81bd096be5f4c82f4e8f156ef112402 multilib b2a329026f2e404e9e371097dda47f96 perl-functions 1863acf0982afafc67797e3ce7275b4c toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 _md5_=faeb202e0aded0cb660ea87d6d7be81b diff --git a/metadata/md5-cache/sci-biology/velvet-1.2.10 b/metadata/md5-cache/sci-biology/velvet-1.2.10 index 560e3107a96a..f92c545b8170 100644 --- a/metadata/md5-cache/sci-biology/velvet-1.2.10 +++ b/metadata/md5-cache/sci-biology/velvet-1.2.10 @@ -9,5 +9,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=https://www.ebi.ac.uk/~zerbino/velvet/velvet_1.2.10.tgz -_eclasses_=flag-o-matic 16d3941ed2dc39f4819368ae51bc0b72 multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 +_eclasses_=flag-o-matic e8de74bac929ba17427e740e95707d00 multilib b2a329026f2e404e9e371097dda47f96 toolchain-funcs 6afdb6107430c1832ca7e16aacbf8fa1 _md5_=65984f7f95bbcc7f23c26eede004c9cc |