diff options
Diffstat (limited to 'metadata/md5-cache/sci-biology')
120 files changed, 133 insertions, 133 deletions
diff --git a/metadata/md5-cache/sci-biology/ApE-2.0.7-r1 b/metadata/md5-cache/sci-biology/ApE-2.0.7-r1 index 1ec551ea989a..91721e29f552 100644 --- a/metadata/md5-cache/sci-biology/ApE-2.0.7-r1 +++ b/metadata/md5-cache/sci-biology/ApE-2.0.7-r1 @@ -9,5 +9,5 @@ RDEPEND=dev-lang/tcl:0 dev-lang/tk:0 RESTRICT=bindist mirror SLOT=0 SRC_URI=http://www.biology.utah.edu/jorgensen/wayned/ape/Download/Linux/ApE_linux_current.zip -> ApE-2.0.7.zip -_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 9a53f21c753d823ba20a22f857c25cb4 l10n 3c7381c56a184f0dd5ba3fb824808f30 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib f8d35c2432bb32c4f1e779c4287b31ec preserve-libs dbc9f8d2d49c66467bc327fddd8317bd toolchain-funcs e867df3870e8ff04a5b94f925be8b06a vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 9a53f21c753d823ba20a22f857c25cb4 l10n 3c7381c56a184f0dd5ba3fb824808f30 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 97566c1a256d07b00848aa767e38a352 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=ca6aef807b65b2b092f7e1ff4ebbe5e2 diff --git a/metadata/md5-cache/sci-biology/GBrowse-2.48-r1 b/metadata/md5-cache/sci-biology/GBrowse-2.48-r1 index cdf162a63025..238b1451cd52 100644 --- a/metadata/md5-cache/sci-biology/GBrowse-2.48-r1 +++ b/metadata/md5-cache/sci-biology/GBrowse-2.48-r1 @@ -9,5 +9,5 @@ LICENSE=|| ( Artistic GPL-1+ ) RDEPEND=!<sci-biology/GBrowse-2.44-r1 >=sci-biology/bioperl-1.6.9 >=dev-perl/Bio-Graphics-2.09 >=dev-perl/GD-2.07 >=dev-perl/CGI-Session-4.02 dev-perl/IO-String dev-perl/JSON dev-perl/libwww-perl dev-perl/Statistics-Descriptive !minimal? ( dev-perl/Bio-Das >=dev-perl/Bio-SamTools-1.20 dev-perl/Crypt-SSLeay dev-perl/DB_File-Lock dev-perl/DBI mysql? ( dev-perl/DBD-mysql ) postgres? ( dev-perl/DBD-Pg ) sqlite? ( dev-perl/DBD-SQLite ) dev-perl/FCGI dev-perl/File-NFSLock dev-perl/GD-SVG dev-perl/Net-OpenID-Consumer dev-perl/Net-SMTP-SSL ) dev-lang/perl:=[-build(-)] >=app-admin/webapp-config-1.50.15 SLOT=0 SRC_URI=mirror://cpan/authors/id/L/LD/LDS/GBrowse-2.48.tar.gz -_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 9a53f21c753d823ba20a22f857c25cb4 l10n 3c7381c56a184f0dd5ba3fb824808f30 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib f8d35c2432bb32c4f1e779c4287b31ec multiprocessing 61c959fc55c15c00bbb1079d6a71370b perl-functions fea344a91ebf37efadf172c6a3de5a72 perl-module 0ee2b2b92175720c966a5608c62b458d preserve-libs dbc9f8d2d49c66467bc327fddd8317bd toolchain-funcs e867df3870e8ff04a5b94f925be8b06a unpacker 2eeba54233fa41bdb15dcddcb63fba3a vcs-clean b690a7e9b6c497cf59326a7545df4283 webapp cd327e73cdb307ceb80dcca6b8ad8b52 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 9a53f21c753d823ba20a22f857c25cb4 l10n 3c7381c56a184f0dd5ba3fb824808f30 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 97566c1a256d07b00848aa767e38a352 multiprocessing 61c959fc55c15c00bbb1079d6a71370b perl-functions fea344a91ebf37efadf172c6a3de5a72 perl-module 0ee2b2b92175720c966a5608c62b458d preserve-libs dbc9f8d2d49c66467bc327fddd8317bd toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa unpacker 2eeba54233fa41bdb15dcddcb63fba3a vcs-clean b690a7e9b6c497cf59326a7545df4283 webapp cd327e73cdb307ceb80dcca6b8ad8b52 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=088b19055886b41078acab0f96df204a diff --git a/metadata/md5-cache/sci-biology/HTSeq-0.12.4 b/metadata/md5-cache/sci-biology/HTSeq-0.12.4 index 5e5c49242ee1..eb462635a616 100644 --- a/metadata/md5-cache/sci-biology/HTSeq-0.12.4 +++ b/metadata/md5-cache/sci-biology/HTSeq-0.12.4 @@ -1,15 +1,15 @@ -BDEPEND=>=dev-lang/swig-3.0.8 dev-python/cython[python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_8(-),-python_single_target_python3_9(-)] python_targets_python3_8? ( dev-lang/python:3.8 ) python_targets_python3_9? ( dev-lang/python:3.9 ) >=dev-lang/python-exec-2:=[python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_8(-),-python_single_target_python3_9(-)] >=dev-python/setuptools-42.0.2[python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_8(-),-python_single_target_python3_9(-)] +BDEPEND=>=dev-lang/swig-3.0.8 dev-python/cython[python_targets_python3_8(-)?,python_targets_python3_9(-)?] python_targets_python3_8? ( dev-lang/python:3.8 ) python_targets_python3_9? ( dev-lang/python:3.9 ) >=dev-lang/python-exec-2:=[python_targets_python3_8(-)?,python_targets_python3_9(-)?] >=dev-python/setuptools-42.0.2[python_targets_python3_8(-)?,python_targets_python3_9(-)?] DEFINED_PHASES=compile configure install prepare test -DEPEND=dev-python/numpy[python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_8(-),-python_single_target_python3_9(-)] dev-python/matplotlib[python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_8(-),-python_single_target_python3_9(-)] sci-biology/pysam[python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_8(-),-python_single_target_python3_9(-)] +DEPEND=dev-python/numpy[python_targets_python3_8(-)?,python_targets_python3_9(-)?] dev-python/matplotlib[python_targets_python3_8(-)?,python_targets_python3_9(-)?] sci-biology/pysam[python_targets_python3_8(-)?,python_targets_python3_9(-)?] DESCRIPTION=Python support for SAM/BAM/Bowtie/FASTA/Q/GFF/GTF files EAPI=7 HOMEPAGE=https://htseq.readthedocs.io/ IUSE=python_targets_python3_8 python_targets_python3_9 KEYWORDS=~amd64 LICENSE=GPL-3+ -RDEPEND=dev-python/numpy[python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_8(-),-python_single_target_python3_9(-)] dev-python/matplotlib[python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_8(-),-python_single_target_python3_9(-)] sci-biology/pysam[python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_8(-),-python_single_target_python3_9(-)] python_targets_python3_8? ( dev-lang/python:3.8 ) python_targets_python3_9? ( dev-lang/python:3.9 ) >=dev-lang/python-exec-2:=[python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_8(-),-python_single_target_python3_9(-)] +RDEPEND=dev-python/numpy[python_targets_python3_8(-)?,python_targets_python3_9(-)?] dev-python/matplotlib[python_targets_python3_8(-)?,python_targets_python3_9(-)?] sci-biology/pysam[python_targets_python3_8(-)?,python_targets_python3_9(-)?] python_targets_python3_8? ( dev-lang/python:3.8 ) python_targets_python3_9? ( dev-lang/python:3.9 ) >=dev-lang/python-exec-2:=[python_targets_python3_8(-)?,python_targets_python3_9(-)?] REQUIRED_USE=|| ( python_targets_python3_8 python_targets_python3_9 ) SLOT=0 SRC_URI=https://github.com/htseq/htseq/archive/release_0.12.4.tar.gz -> HTSeq-0.12.4.tar.gz -_eclasses_=distutils-r1 c21cf58c1e3c67e0ea53c96a7b37eddd multibuild 6b3d5ee849dafe6cdfd7b859c211fb01 multilib f8d35c2432bb32c4f1e779c4287b31ec multiprocessing 61c959fc55c15c00bbb1079d6a71370b python-r1 26e4ad0a4190b14f70973dc253e86535 python-utils-r1 6e84b7d3d8d0bb1ee12774f4a66909e2 toolchain-funcs e867df3870e8ff04a5b94f925be8b06a +_eclasses_=distutils-r1 881e51510dd0c384fb912f54c0865d2e eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 multibuild 05a584848db4901c97fcd94ae7cc3a97 multilib 97566c1a256d07b00848aa767e38a352 multiprocessing 61c959fc55c15c00bbb1079d6a71370b python-r1 e20b80360497e6215aed0dd4ca7d6bad python-utils-r1 969dff6876159a10dfdad9e01d265d1c toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa _md5_=ae9941d3e3234244619fdcb2b46c8e90 diff --git a/metadata/md5-cache/sci-biology/HTSeq-9999 b/metadata/md5-cache/sci-biology/HTSeq-9999 index 8d393720a28c..be665d74d5f6 100644 --- a/metadata/md5-cache/sci-biology/HTSeq-9999 +++ b/metadata/md5-cache/sci-biology/HTSeq-9999 @@ -1,14 +1,14 @@ -BDEPEND=>=dev-lang/swig-3.0.8 dev-python/cython[python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_8(-),-python_single_target_python3_9(-)] python_targets_python3_8? ( dev-lang/python:3.8 ) python_targets_python3_9? ( dev-lang/python:3.9 ) >=dev-lang/python-exec-2:=[python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_8(-),-python_single_target_python3_9(-)] >=dev-python/setuptools-42.0.2[python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_8(-),-python_single_target_python3_9(-)] >=dev-vcs/git-1.8.2.1[curl] +BDEPEND=>=dev-lang/swig-3.0.8 dev-python/cython[python_targets_python3_8(-)?,python_targets_python3_9(-)?] python_targets_python3_8? ( dev-lang/python:3.8 ) python_targets_python3_9? ( dev-lang/python:3.9 ) >=dev-lang/python-exec-2:=[python_targets_python3_8(-)?,python_targets_python3_9(-)?] >=dev-python/setuptools-42.0.2[python_targets_python3_8(-)?,python_targets_python3_9(-)?] >=dev-vcs/git-1.8.2.1[curl] DEFINED_PHASES=compile configure install prepare test unpack -DEPEND=dev-python/numpy[python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_8(-),-python_single_target_python3_9(-)] dev-python/matplotlib[python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_8(-),-python_single_target_python3_9(-)] sci-biology/pysam[python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_8(-),-python_single_target_python3_9(-)] +DEPEND=dev-python/numpy[python_targets_python3_8(-)?,python_targets_python3_9(-)?] dev-python/matplotlib[python_targets_python3_8(-)?,python_targets_python3_9(-)?] sci-biology/pysam[python_targets_python3_8(-)?,python_targets_python3_9(-)?] DESCRIPTION=Python support for SAM/BAM/Bowtie/FASTA/Q/GFF/GTF files EAPI=7 HOMEPAGE=https://htseq.readthedocs.io/ IUSE=python_targets_python3_8 python_targets_python3_9 LICENSE=GPL-3+ PROPERTIES=live -RDEPEND=dev-python/numpy[python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_8(-),-python_single_target_python3_9(-)] dev-python/matplotlib[python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_8(-),-python_single_target_python3_9(-)] sci-biology/pysam[python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_8(-),-python_single_target_python3_9(-)] python_targets_python3_8? ( dev-lang/python:3.8 ) python_targets_python3_9? ( dev-lang/python:3.9 ) >=dev-lang/python-exec-2:=[python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_8(-),-python_single_target_python3_9(-)] +RDEPEND=dev-python/numpy[python_targets_python3_8(-)?,python_targets_python3_9(-)?] dev-python/matplotlib[python_targets_python3_8(-)?,python_targets_python3_9(-)?] sci-biology/pysam[python_targets_python3_8(-)?,python_targets_python3_9(-)?] python_targets_python3_8? ( dev-lang/python:3.8 ) python_targets_python3_9? ( dev-lang/python:3.9 ) >=dev-lang/python-exec-2:=[python_targets_python3_8(-)?,python_targets_python3_9(-)?] REQUIRED_USE=|| ( python_targets_python3_8 python_targets_python3_9 ) SLOT=0 -_eclasses_=distutils-r1 c21cf58c1e3c67e0ea53c96a7b37eddd git-r3 b8e8c92aa5fe8df7187e466138eb4e52 multibuild 6b3d5ee849dafe6cdfd7b859c211fb01 multilib f8d35c2432bb32c4f1e779c4287b31ec multiprocessing 61c959fc55c15c00bbb1079d6a71370b python-r1 26e4ad0a4190b14f70973dc253e86535 python-utils-r1 6e84b7d3d8d0bb1ee12774f4a66909e2 toolchain-funcs e867df3870e8ff04a5b94f925be8b06a +_eclasses_=distutils-r1 881e51510dd0c384fb912f54c0865d2e eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 git-r3 cc875b0c1e9b3bdac1af0f82f3ba29da multibuild 05a584848db4901c97fcd94ae7cc3a97 multilib 97566c1a256d07b00848aa767e38a352 multiprocessing 61c959fc55c15c00bbb1079d6a71370b python-r1 e20b80360497e6215aed0dd4ca7d6bad python-utils-r1 969dff6876159a10dfdad9e01d265d1c toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa _md5_=ae9941d3e3234244619fdcb2b46c8e90 diff --git a/metadata/md5-cache/sci-biology/Manifest.gz b/metadata/md5-cache/sci-biology/Manifest.gz Binary files differindex de17857edc1d..3253863547df 100644 --- a/metadata/md5-cache/sci-biology/Manifest.gz +++ b/metadata/md5-cache/sci-biology/Manifest.gz diff --git a/metadata/md5-cache/sci-biology/STAR-2.5.3a b/metadata/md5-cache/sci-biology/STAR-2.5.3a index 5edae19d73cc..ffbc4d47f416 100644 --- a/metadata/md5-cache/sci-biology/STAR-2.5.3a +++ b/metadata/md5-cache/sci-biology/STAR-2.5.3a @@ -8,5 +8,5 @@ LICENSE=GPL-3 RDEPEND=sci-libs/htslib:= SLOT=0 SRC_URI=https://github.com/alexdobin/STAR/archive/2.5.3a.tar.gz -> STAR-2.5.3a.tar.gz -_eclasses_=multilib f8d35c2432bb32c4f1e779c4287b31ec toolchain-funcs e867df3870e8ff04a5b94f925be8b06a +_eclasses_=multilib 97566c1a256d07b00848aa767e38a352 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa _md5_=1eb821b9192887ab1f2ac6b1536037ac diff --git a/metadata/md5-cache/sci-biology/abyss-2.0.3-r2 b/metadata/md5-cache/sci-biology/abyss-2.0.3-r2 index ba60f184a9c5..81e81ac48d60 100644 --- a/metadata/md5-cache/sci-biology/abyss-2.0.3-r2 +++ b/metadata/md5-cache/sci-biology/abyss-2.0.3-r2 @@ -9,5 +9,5 @@ LICENSE=abyss RDEPEND=dev-cpp/sparsehash dev-libs/boost:= misc-haskell? ( dev-libs/gmp:0= dev-libs/libffi:0= ) mpi? ( sys-cluster/openmpi ) SLOT=0 SRC_URI=https://github.com/bcgsc/abyss/archive/2.0.3.tar.gz -> abyss-2.0.3.tar.gz -_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 9a53f21c753d823ba20a22f857c25cb4 gnuconfig 9f91b4b0c84e734a87492d4293f03de5 l10n 3c7381c56a184f0dd5ba3fb824808f30 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib f8d35c2432bb32c4f1e779c4287b31ec preserve-libs dbc9f8d2d49c66467bc327fddd8317bd toolchain-funcs e867df3870e8ff04a5b94f925be8b06a vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 9a53f21c753d823ba20a22f857c25cb4 gnuconfig 262062cef0ba4f22b397193da514a350 l10n 3c7381c56a184f0dd5ba3fb824808f30 libtool 241a8f577b9781a42a7421e53448a44e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 97566c1a256d07b00848aa767e38a352 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=14d874a3152b5d75a6be53f68e24fd47 diff --git a/metadata/md5-cache/sci-biology/amap-2.2-r4 b/metadata/md5-cache/sci-biology/amap-2.2-r4 index c76542ee5473..3b23726cc817 100644 --- a/metadata/md5-cache/sci-biology/amap-2.2-r4 +++ b/metadata/md5-cache/sci-biology/amap-2.2-r4 @@ -9,5 +9,5 @@ LICENSE=GPL-2 RDEPEND=java? ( >=virtual/jre-1.8:* ) java? ( >=dev-java/java-config-2.2.0-r3 ) SLOT=0 SRC_URI=http://baboon.math.berkeley.edu/amap/download/amap.2.2.tar.gz -_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 eapi7-ver f9ec87e93172b25ce65a85303dc06964 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 9a53f21c753d823ba20a22f857c25cb4 java-ant-2 b894c6ee57778b79eaa20e56ece53358 java-pkg-opt-2 c9d8408eceaa8e56c729df071dd8cb57 java-utils-2 b5e6ac3113ad5ad2b604a72029a9969f l10n 3c7381c56a184f0dd5ba3fb824808f30 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib f8d35c2432bb32c4f1e779c4287b31ec preserve-libs dbc9f8d2d49c66467bc327fddd8317bd toolchain-funcs e867df3870e8ff04a5b94f925be8b06a vcs-clean b690a7e9b6c497cf59326a7545df4283 versionator d3fb3ba33acc3bbbdc4d7970227c100d wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 eapi7-ver f9ec87e93172b25ce65a85303dc06964 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 9a53f21c753d823ba20a22f857c25cb4 java-ant-2 b894c6ee57778b79eaa20e56ece53358 java-pkg-opt-2 c9d8408eceaa8e56c729df071dd8cb57 java-utils-2 b5e6ac3113ad5ad2b604a72029a9969f l10n 3c7381c56a184f0dd5ba3fb824808f30 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 97566c1a256d07b00848aa767e38a352 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa vcs-clean b690a7e9b6c497cf59326a7545df4283 versionator d3fb3ba33acc3bbbdc4d7970227c100d wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=857434504156a8892f1335babe24f9f0 diff --git a/metadata/md5-cache/sci-biology/augustus-2.5.5 b/metadata/md5-cache/sci-biology/augustus-2.5.5 index 5109b453b107..a086210a2e0b 100644 --- a/metadata/md5-cache/sci-biology/augustus-2.5.5 +++ b/metadata/md5-cache/sci-biology/augustus-2.5.5 @@ -7,5 +7,5 @@ KEYWORDS=amd64 x86 LICENSE=Artistic SLOT=0 SRC_URI=http://augustus.gobics.de/binaries/augustus.2.5.5.tar.gz -_eclasses_=multilib f8d35c2432bb32c4f1e779c4287b31ec toolchain-funcs e867df3870e8ff04a5b94f925be8b06a +_eclasses_=multilib 97566c1a256d07b00848aa767e38a352 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa _md5_=80962b244c7531e320f35904727b5bd5 diff --git a/metadata/md5-cache/sci-biology/bamtools-2.5.2 b/metadata/md5-cache/sci-biology/bamtools-2.5.2 index 646744b5ed83..c5800bffa9da 100644 --- a/metadata/md5-cache/sci-biology/bamtools-2.5.2 +++ b/metadata/md5-cache/sci-biology/bamtools-2.5.2 @@ -9,5 +9,5 @@ LICENSE=MIT RDEPEND=>=dev-libs/jsoncpp-1.8.0:= sys-libs/zlib:= SLOT=0/2.5.2 SRC_URI=https://github.com/pezmaster31/bamtools/archive/v2.5.2.tar.gz -> bamtools-2.5.2.tar.gz -_eclasses_=cmake 518e4c9a6a38dfd7afc54b6a7c5de3da edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic bc2e7662a4a9a8643be851982a837ddc l10n 3c7381c56a184f0dd5ba3fb824808f30 multilib f8d35c2432bb32c4f1e779c4287b31ec multiprocessing 61c959fc55c15c00bbb1079d6a71370b ninja-utils 132cbb376048d079b5a012f5467c4e7f toolchain-funcs e867df3870e8ff04a5b94f925be8b06a wrapper 4251d4c84c25f59094fd557e0063a974 xdg-utils ff2ff954e6b17929574eee4efc5152ba +_eclasses_=cmake 518e4c9a6a38dfd7afc54b6a7c5de3da edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 l10n 3c7381c56a184f0dd5ba3fb824808f30 multilib 97566c1a256d07b00848aa767e38a352 multiprocessing 61c959fc55c15c00bbb1079d6a71370b ninja-utils 132cbb376048d079b5a012f5467c4e7f toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa wrapper 4251d4c84c25f59094fd557e0063a974 xdg-utils ff2ff954e6b17929574eee4efc5152ba _md5_=efdfbdbf4181a018ee9965d5c16be71f diff --git a/metadata/md5-cache/sci-biology/bamtools-9999 b/metadata/md5-cache/sci-biology/bamtools-9999 index 80d73c1f6911..016b7b865424 100644 --- a/metadata/md5-cache/sci-biology/bamtools-9999 +++ b/metadata/md5-cache/sci-biology/bamtools-9999 @@ -8,5 +8,5 @@ LICENSE=MIT PROPERTIES=live RDEPEND=>=dev-libs/jsoncpp-1.8.0:= sys-libs/zlib:= SLOT=0/9999 -_eclasses_=cmake 518e4c9a6a38dfd7afc54b6a7c5de3da edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic bc2e7662a4a9a8643be851982a837ddc git-r3 b8e8c92aa5fe8df7187e466138eb4e52 l10n 3c7381c56a184f0dd5ba3fb824808f30 multilib f8d35c2432bb32c4f1e779c4287b31ec multiprocessing 61c959fc55c15c00bbb1079d6a71370b ninja-utils 132cbb376048d079b5a012f5467c4e7f toolchain-funcs e867df3870e8ff04a5b94f925be8b06a wrapper 4251d4c84c25f59094fd557e0063a974 xdg-utils ff2ff954e6b17929574eee4efc5152ba +_eclasses_=cmake 518e4c9a6a38dfd7afc54b6a7c5de3da edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 git-r3 cc875b0c1e9b3bdac1af0f82f3ba29da l10n 3c7381c56a184f0dd5ba3fb824808f30 multilib 97566c1a256d07b00848aa767e38a352 multiprocessing 61c959fc55c15c00bbb1079d6a71370b ninja-utils 132cbb376048d079b5a012f5467c4e7f toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa wrapper 4251d4c84c25f59094fd557e0063a974 xdg-utils ff2ff954e6b17929574eee4efc5152ba _md5_=a2299dc6ca850c1c25582656d7586681 diff --git a/metadata/md5-cache/sci-biology/bcftools-1.10.2 b/metadata/md5-cache/sci-biology/bcftools-1.10.2 index 35dddc66d909..a8cbb06ced24 100644 --- a/metadata/md5-cache/sci-biology/bcftools-1.10.2 +++ b/metadata/md5-cache/sci-biology/bcftools-1.10.2 @@ -10,5 +10,5 @@ RDEPEND=dev-lang/perl python_single_target_python3_8? ( dev-python/matplotlib[py REQUIRED_USE=^^ ( python_single_target_python3_8 python_single_target_python3_9 ) SLOT=0 SRC_URI=https://github.com/samtools/bcftools/releases/download/1.10.2/bcftools-1.10.2.tar.bz2 -_eclasses_=multilib f8d35c2432bb32c4f1e779c4287b31ec python-single-r1 d25ac9d5d91fe9d44fda6ec192aca11a python-utils-r1 6e84b7d3d8d0bb1ee12774f4a66909e2 toolchain-funcs e867df3870e8ff04a5b94f925be8b06a +_eclasses_=eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 multilib 97566c1a256d07b00848aa767e38a352 python-single-r1 73f113f91928e0d16bceb65ecbcd8e75 python-utils-r1 969dff6876159a10dfdad9e01d265d1c toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa _md5_=2fd4d2217632ea38f3b2adae16fec9fb diff --git a/metadata/md5-cache/sci-biology/bedtools-2.29.2 b/metadata/md5-cache/sci-biology/bedtools-2.29.2 index 276e8c329d1f..3e0a0de4fa83 100644 --- a/metadata/md5-cache/sci-biology/bedtools-2.29.2 +++ b/metadata/md5-cache/sci-biology/bedtools-2.29.2 @@ -11,5 +11,5 @@ RDEPEND=app-arch/bzip2 app-arch/xz-utils sys-libs/zlib RESTRICT=!test? ( test ) SLOT=0 SRC_URI=https://github.com/arq5x/bedtools2/releases/download/v2.29.2/bedtools-2.29.2.tar.gz -_eclasses_=multilib f8d35c2432bb32c4f1e779c4287b31ec python-any-r1 17241a11501065ff3651350040875aa9 python-utils-r1 6e84b7d3d8d0bb1ee12774f4a66909e2 toolchain-funcs e867df3870e8ff04a5b94f925be8b06a +_eclasses_=eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 multilib 97566c1a256d07b00848aa767e38a352 python-any-r1 901d9e22c7a848a1196502edf060f330 python-utils-r1 969dff6876159a10dfdad9e01d265d1c toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa _md5_=f3eef2425b0d021201cd5bb705836375 diff --git a/metadata/md5-cache/sci-biology/bedtools-2.30.0 b/metadata/md5-cache/sci-biology/bedtools-2.30.0 index 60fa327d0236..e83f2580dc1d 100644 --- a/metadata/md5-cache/sci-biology/bedtools-2.30.0 +++ b/metadata/md5-cache/sci-biology/bedtools-2.30.0 @@ -11,5 +11,5 @@ RDEPEND=app-arch/bzip2 app-arch/xz-utils sys-libs/zlib RESTRICT=!test? ( test ) SLOT=0 SRC_URI=https://github.com/arq5x/bedtools2/releases/download/v2.30.0/bedtools-2.30.0.tar.gz -_eclasses_=multilib f8d35c2432bb32c4f1e779c4287b31ec python-any-r1 17241a11501065ff3651350040875aa9 python-utils-r1 6e84b7d3d8d0bb1ee12774f4a66909e2 toolchain-funcs e867df3870e8ff04a5b94f925be8b06a +_eclasses_=eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 multilib 97566c1a256d07b00848aa767e38a352 python-any-r1 901d9e22c7a848a1196502edf060f330 python-utils-r1 969dff6876159a10dfdad9e01d265d1c toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa _md5_=14bf1e3697276975f4e8b47a297b1bf5 diff --git a/metadata/md5-cache/sci-biology/bfast-0.7.0a b/metadata/md5-cache/sci-biology/bfast-0.7.0a index e9e1ab0f172e..eefbf0dbddab 100644 --- a/metadata/md5-cache/sci-biology/bfast-0.7.0a +++ b/metadata/md5-cache/sci-biology/bfast-0.7.0a @@ -10,5 +10,5 @@ RDEPEND=dev-perl/XML-Simple RESTRICT=test SLOT=0 SRC_URI=mirror://sourceforge/bfast/bfast-0.7.0a.tar.gz -_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 gnuconfig 9f91b4b0c84e734a87492d4293f03de5 libtool f143db5a74ccd9ca28c1234deffede96 multilib f8d35c2432bb32c4f1e779c4287b31ec toolchain-funcs e867df3870e8ff04a5b94f925be8b06a +_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib 97566c1a256d07b00848aa767e38a352 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa _md5_=e64abecddb86e9860edc80410f299d83 diff --git a/metadata/md5-cache/sci-biology/biogrep-1.0-r2 b/metadata/md5-cache/sci-biology/biogrep-1.0-r2 index db9946b38799..61c83b9a0bf1 100644 --- a/metadata/md5-cache/sci-biology/biogrep-1.0-r2 +++ b/metadata/md5-cache/sci-biology/biogrep-1.0-r2 @@ -8,5 +8,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=http://www.openwetware.org/images/3/3d/Biogrep-1.0.tar.gz -> biogrep-1.0.tar.gz doc? ( http://www.openwetware.org/images/4/49/Biogrep.pdf -> biogrep-1.0.pdf ) -_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 9a53f21c753d823ba20a22f857c25cb4 gnuconfig 9f91b4b0c84e734a87492d4293f03de5 l10n 3c7381c56a184f0dd5ba3fb824808f30 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib f8d35c2432bb32c4f1e779c4287b31ec preserve-libs dbc9f8d2d49c66467bc327fddd8317bd toolchain-funcs e867df3870e8ff04a5b94f925be8b06a vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 9a53f21c753d823ba20a22f857c25cb4 gnuconfig 262062cef0ba4f22b397193da514a350 l10n 3c7381c56a184f0dd5ba3fb824808f30 libtool 241a8f577b9781a42a7421e53448a44e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 97566c1a256d07b00848aa767e38a352 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=9731727dae2a2514bcaa486b0059272e diff --git a/metadata/md5-cache/sci-biology/biopandas-0.2.7 b/metadata/md5-cache/sci-biology/biopandas-0.2.7 index 78a50c55f927..d57182e8a84d 100644 --- a/metadata/md5-cache/sci-biology/biopandas-0.2.7 +++ b/metadata/md5-cache/sci-biology/biopandas-0.2.7 @@ -1,4 +1,4 @@ -BDEPEND=test? ( dev-python/numpy[python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_8(-),-python_single_target_python3_9(-)] dev-python/pandas[python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_8(-),-python_single_target_python3_9(-)] dev-python/scipy[python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_8(-),-python_single_target_python3_9(-)] >=dev-python/nose-1.3.7-r4[python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_8(-),-python_single_target_python3_9(-)] ) python_targets_python3_8? ( dev-lang/python:3.8 ) python_targets_python3_9? ( dev-lang/python:3.9 ) >=dev-lang/python-exec-2:=[python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_8(-),-python_single_target_python3_9(-)] >=dev-python/setuptools-42.0.2[python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_8(-),-python_single_target_python3_9(-)] +BDEPEND=test? ( dev-python/numpy[python_targets_python3_8(-)?,python_targets_python3_9(-)?] dev-python/pandas[python_targets_python3_8(-)?,python_targets_python3_9(-)?] dev-python/scipy[python_targets_python3_8(-)?,python_targets_python3_9(-)?] >=dev-python/nose-1.3.7-r4[python_targets_python3_8(-)?,python_targets_python3_9(-)?] ) python_targets_python3_8? ( dev-lang/python:3.8 ) python_targets_python3_9? ( dev-lang/python:3.9 ) >=dev-lang/python-exec-2:=[python_targets_python3_8(-)?,python_targets_python3_9(-)?] >=dev-python/setuptools-42.0.2[python_targets_python3_8(-)?,python_targets_python3_9(-)?] DEFINED_PHASES=compile configure install prepare test DESCRIPTION=Molecular Structures in Pandas DataFrames EAPI=7 @@ -6,10 +6,10 @@ HOMEPAGE=https://rasbt.github.io/biopandas/ https://github.com/rasbt/biopandas h IUSE=test test python_targets_python3_8 python_targets_python3_9 KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux LICENSE=BSD -RDEPEND=dev-python/numpy[python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_8(-),-python_single_target_python3_9(-)] dev-python/pandas[python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_8(-),-python_single_target_python3_9(-)] dev-python/scipy[python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_8(-),-python_single_target_python3_9(-)] python_targets_python3_8? ( dev-lang/python:3.8 ) python_targets_python3_9? ( dev-lang/python:3.9 ) >=dev-lang/python-exec-2:=[python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_8(-),-python_single_target_python3_9(-)] +RDEPEND=dev-python/numpy[python_targets_python3_8(-)?,python_targets_python3_9(-)?] dev-python/pandas[python_targets_python3_8(-)?,python_targets_python3_9(-)?] dev-python/scipy[python_targets_python3_8(-)?,python_targets_python3_9(-)?] python_targets_python3_8? ( dev-lang/python:3.8 ) python_targets_python3_9? ( dev-lang/python:3.9 ) >=dev-lang/python-exec-2:=[python_targets_python3_8(-)?,python_targets_python3_9(-)?] REQUIRED_USE=|| ( python_targets_python3_8 python_targets_python3_9 ) RESTRICT=!test? ( test ) !test? ( test ) SLOT=0 SRC_URI=mirror://pypi/B/BioPandas/biopandas-0.2.7.tar.gz -_eclasses_=distutils-r1 c21cf58c1e3c67e0ea53c96a7b37eddd multibuild 6b3d5ee849dafe6cdfd7b859c211fb01 multilib f8d35c2432bb32c4f1e779c4287b31ec multiprocessing 61c959fc55c15c00bbb1079d6a71370b python-r1 26e4ad0a4190b14f70973dc253e86535 python-utils-r1 6e84b7d3d8d0bb1ee12774f4a66909e2 toolchain-funcs e867df3870e8ff04a5b94f925be8b06a +_eclasses_=distutils-r1 881e51510dd0c384fb912f54c0865d2e eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 multibuild 05a584848db4901c97fcd94ae7cc3a97 multilib 97566c1a256d07b00848aa767e38a352 multiprocessing 61c959fc55c15c00bbb1079d6a71370b python-r1 e20b80360497e6215aed0dd4ca7d6bad python-utils-r1 969dff6876159a10dfdad9e01d265d1c toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa _md5_=6e4b8600d4f3c3ac26b099a9c4577ca0 diff --git a/metadata/md5-cache/sci-biology/bioperl-1.6.9 b/metadata/md5-cache/sci-biology/bioperl-1.6.9 index 47896b5d1fcd..ba91ba77760c 100644 --- a/metadata/md5-cache/sci-biology/bioperl-1.6.9 +++ b/metadata/md5-cache/sci-biology/bioperl-1.6.9 @@ -11,5 +11,5 @@ RDEPEND=dev-perl/libwww-perl !minimal? ( dev-perl/Algorithm-Munkres dev-perl/Arr REQUIRED_USE=minimal? ( !graphviz ) SLOT=0 SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-1.6.901.tar.gz -_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 9a53f21c753d823ba20a22f857c25cb4 l10n 3c7381c56a184f0dd5ba3fb824808f30 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib f8d35c2432bb32c4f1e779c4287b31ec multiprocessing 61c959fc55c15c00bbb1079d6a71370b perl-functions fea344a91ebf37efadf172c6a3de5a72 perl-module 0ee2b2b92175720c966a5608c62b458d preserve-libs dbc9f8d2d49c66467bc327fddd8317bd toolchain-funcs e867df3870e8ff04a5b94f925be8b06a unpacker 2eeba54233fa41bdb15dcddcb63fba3a vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 9a53f21c753d823ba20a22f857c25cb4 l10n 3c7381c56a184f0dd5ba3fb824808f30 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 97566c1a256d07b00848aa767e38a352 multiprocessing 61c959fc55c15c00bbb1079d6a71370b perl-functions fea344a91ebf37efadf172c6a3de5a72 perl-module 0ee2b2b92175720c966a5608c62b458d preserve-libs dbc9f8d2d49c66467bc327fddd8317bd toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa unpacker 2eeba54233fa41bdb15dcddcb63fba3a vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=8a48cf5c6cd3d568ec12cc4fdb88021b diff --git a/metadata/md5-cache/sci-biology/bioperl-db-1.6.9 b/metadata/md5-cache/sci-biology/bioperl-db-1.6.9 index 61ad91f7cee6..1d07c38e1517 100644 --- a/metadata/md5-cache/sci-biology/bioperl-db-1.6.9 +++ b/metadata/md5-cache/sci-biology/bioperl-db-1.6.9 @@ -10,5 +10,5 @@ RDEPEND=>=sci-biology/bioperl-1.6.9 dev-perl/DBD-mysql dev-perl/DBI sci-biology/ RESTRICT=test SLOT=0 SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-DB-1.006900.tar.gz -_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 9a53f21c753d823ba20a22f857c25cb4 l10n 3c7381c56a184f0dd5ba3fb824808f30 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib f8d35c2432bb32c4f1e779c4287b31ec multiprocessing 61c959fc55c15c00bbb1079d6a71370b perl-functions fea344a91ebf37efadf172c6a3de5a72 perl-module 0ee2b2b92175720c966a5608c62b458d preserve-libs dbc9f8d2d49c66467bc327fddd8317bd toolchain-funcs e867df3870e8ff04a5b94f925be8b06a unpacker 2eeba54233fa41bdb15dcddcb63fba3a vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 9a53f21c753d823ba20a22f857c25cb4 l10n 3c7381c56a184f0dd5ba3fb824808f30 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 97566c1a256d07b00848aa767e38a352 multiprocessing 61c959fc55c15c00bbb1079d6a71370b perl-functions fea344a91ebf37efadf172c6a3de5a72 perl-module 0ee2b2b92175720c966a5608c62b458d preserve-libs dbc9f8d2d49c66467bc327fddd8317bd toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa unpacker 2eeba54233fa41bdb15dcddcb63fba3a vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=2470d7ecf1b6ff1902a8d74057748480 diff --git a/metadata/md5-cache/sci-biology/bioperl-network-1.6.9 b/metadata/md5-cache/sci-biology/bioperl-network-1.6.9 index 08dfb48bb45c..e285dc1787a5 100644 --- a/metadata/md5-cache/sci-biology/bioperl-network-1.6.9 +++ b/metadata/md5-cache/sci-biology/bioperl-network-1.6.9 @@ -10,5 +10,5 @@ RDEPEND=>=sci-biology/bioperl-1.6.9 >=dev-perl/Graph-0.86 dev-lang/perl:=[-build RESTRICT=!test? ( test ) SLOT=0 SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-Network-1.006900.tar.gz -_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 9a53f21c753d823ba20a22f857c25cb4 l10n 3c7381c56a184f0dd5ba3fb824808f30 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib f8d35c2432bb32c4f1e779c4287b31ec multiprocessing 61c959fc55c15c00bbb1079d6a71370b perl-functions fea344a91ebf37efadf172c6a3de5a72 perl-module 0ee2b2b92175720c966a5608c62b458d preserve-libs dbc9f8d2d49c66467bc327fddd8317bd toolchain-funcs e867df3870e8ff04a5b94f925be8b06a unpacker 2eeba54233fa41bdb15dcddcb63fba3a vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 9a53f21c753d823ba20a22f857c25cb4 l10n 3c7381c56a184f0dd5ba3fb824808f30 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 97566c1a256d07b00848aa767e38a352 multiprocessing 61c959fc55c15c00bbb1079d6a71370b perl-functions fea344a91ebf37efadf172c6a3de5a72 perl-module 0ee2b2b92175720c966a5608c62b458d preserve-libs dbc9f8d2d49c66467bc327fddd8317bd toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa unpacker 2eeba54233fa41bdb15dcddcb63fba3a vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=8f7c4053ffbec76cfad29cca2d99847b diff --git a/metadata/md5-cache/sci-biology/bioperl-run-1.6.9 b/metadata/md5-cache/sci-biology/bioperl-run-1.6.9 index b76e4597e9c6..abedc622c562 100644 --- a/metadata/md5-cache/sci-biology/bioperl-run-1.6.9 +++ b/metadata/md5-cache/sci-biology/bioperl-run-1.6.9 @@ -10,5 +10,5 @@ RDEPEND=>=sci-biology/bioperl-1.6.9 !minimal? ( dev-perl/Algorithm-Diff dev-perl RESTRICT=test SLOT=0 SRC_URI=mirror://cpan/authors/id/C/CJ/CJFIELDS/BioPerl-Run-1.006900.tar.gz -_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 9a53f21c753d823ba20a22f857c25cb4 l10n 3c7381c56a184f0dd5ba3fb824808f30 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib f8d35c2432bb32c4f1e779c4287b31ec multiprocessing 61c959fc55c15c00bbb1079d6a71370b perl-functions fea344a91ebf37efadf172c6a3de5a72 perl-module 0ee2b2b92175720c966a5608c62b458d preserve-libs dbc9f8d2d49c66467bc327fddd8317bd toolchain-funcs e867df3870e8ff04a5b94f925be8b06a unpacker 2eeba54233fa41bdb15dcddcb63fba3a vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 9a53f21c753d823ba20a22f857c25cb4 l10n 3c7381c56a184f0dd5ba3fb824808f30 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 97566c1a256d07b00848aa767e38a352 multiprocessing 61c959fc55c15c00bbb1079d6a71370b perl-functions fea344a91ebf37efadf172c6a3de5a72 perl-module 0ee2b2b92175720c966a5608c62b458d preserve-libs dbc9f8d2d49c66467bc327fddd8317bd toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa unpacker 2eeba54233fa41bdb15dcddcb63fba3a vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=990b4cff1e1e1338ee686efddaad7810 diff --git a/metadata/md5-cache/sci-biology/biopython-1.77 b/metadata/md5-cache/sci-biology/biopython-1.77 index bffeddb97bbc..9dfece2662aa 100644 --- a/metadata/md5-cache/sci-biology/biopython-1.77 +++ b/metadata/md5-cache/sci-biology/biopython-1.77 @@ -1,15 +1,15 @@ -BDEPEND=sys-devel/flex python_targets_python3_8? ( dev-lang/python:3.8 ) python_targets_python3_9? ( dev-lang/python:3.9 ) >=dev-lang/python-exec-2:=[python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_8(-),-python_single_target_python3_9(-)] >=dev-python/setuptools-42.0.2[python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_8(-),-python_single_target_python3_9(-)] +BDEPEND=sys-devel/flex python_targets_python3_8? ( dev-lang/python:3.8 ) python_targets_python3_9? ( dev-lang/python:3.9 ) >=dev-lang/python-exec-2:=[python_targets_python3_8(-)?,python_targets_python3_9(-)?] >=dev-python/setuptools-42.0.2[python_targets_python3_8(-)?,python_targets_python3_9(-)?] DEFINED_PHASES=compile configure install postinst prepare test -DEPEND=dev-python/matplotlib[python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_8(-),-python_single_target_python3_9(-)] dev-python/networkx[python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_8(-),-python_single_target_python3_9(-)] dev-python/numpy[python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_8(-),-python_single_target_python3_9(-)] dev-python/rdflib[python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_8(-),-python_single_target_python3_9(-)] dev-python/pygraphviz[python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_8(-),-python_single_target_python3_9(-)] >=dev-python/reportlab-3.5.13-r1[python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_8(-),-python_single_target_python3_9(-)] dev-python/pydot[python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_8(-),-python_single_target_python3_9(-)] +DEPEND=dev-python/matplotlib[python_targets_python3_8(-)?,python_targets_python3_9(-)?] dev-python/networkx[python_targets_python3_8(-)?,python_targets_python3_9(-)?] dev-python/numpy[python_targets_python3_8(-)?,python_targets_python3_9(-)?] dev-python/rdflib[python_targets_python3_8(-)?,python_targets_python3_9(-)?] dev-python/pygraphviz[python_targets_python3_8(-)?,python_targets_python3_9(-)?] >=dev-python/reportlab-3.5.13-r1[python_targets_python3_8(-)?,python_targets_python3_9(-)?] dev-python/pydot[python_targets_python3_8(-)?,python_targets_python3_9(-)?] DESCRIPTION=Python modules for computational molecular biology EAPI=7 HOMEPAGE=https://www.biopython.org/ https://pypi.org/project/biopython/ IUSE=python_targets_python3_8 python_targets_python3_9 KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux LICENSE=HPND -RDEPEND=dev-python/matplotlib[python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_8(-),-python_single_target_python3_9(-)] dev-python/networkx[python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_8(-),-python_single_target_python3_9(-)] dev-python/numpy[python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_8(-),-python_single_target_python3_9(-)] dev-python/rdflib[python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_8(-),-python_single_target_python3_9(-)] dev-python/pygraphviz[python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_8(-),-python_single_target_python3_9(-)] >=dev-python/reportlab-3.5.13-r1[python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_8(-),-python_single_target_python3_9(-)] dev-python/pydot[python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_8(-),-python_single_target_python3_9(-)] python_targets_python3_8? ( dev-lang/python:3.8 ) python_targets_python3_9? ( dev-lang/python:3.9 ) >=dev-lang/python-exec-2:=[python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_8(-),-python_single_target_python3_9(-)] +RDEPEND=dev-python/matplotlib[python_targets_python3_8(-)?,python_targets_python3_9(-)?] dev-python/networkx[python_targets_python3_8(-)?,python_targets_python3_9(-)?] dev-python/numpy[python_targets_python3_8(-)?,python_targets_python3_9(-)?] dev-python/rdflib[python_targets_python3_8(-)?,python_targets_python3_9(-)?] dev-python/pygraphviz[python_targets_python3_8(-)?,python_targets_python3_9(-)?] >=dev-python/reportlab-3.5.13-r1[python_targets_python3_8(-)?,python_targets_python3_9(-)?] dev-python/pydot[python_targets_python3_8(-)?,python_targets_python3_9(-)?] python_targets_python3_8? ( dev-lang/python:3.8 ) python_targets_python3_9? ( dev-lang/python:3.9 ) >=dev-lang/python-exec-2:=[python_targets_python3_8(-)?,python_targets_python3_9(-)?] REQUIRED_USE=|| ( python_targets_python3_8 python_targets_python3_9 ) SLOT=0 SRC_URI=mirror://pypi/b/biopython/biopython-1.77.tar.gz -_eclasses_=distutils-r1 c21cf58c1e3c67e0ea53c96a7b37eddd multibuild 6b3d5ee849dafe6cdfd7b859c211fb01 multilib f8d35c2432bb32c4f1e779c4287b31ec multiprocessing 61c959fc55c15c00bbb1079d6a71370b optfeature cc13a38ea4d26565e83ef21d58bcd4ab python-r1 26e4ad0a4190b14f70973dc253e86535 python-utils-r1 6e84b7d3d8d0bb1ee12774f4a66909e2 toolchain-funcs e867df3870e8ff04a5b94f925be8b06a +_eclasses_=distutils-r1 881e51510dd0c384fb912f54c0865d2e eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 multibuild 05a584848db4901c97fcd94ae7cc3a97 multilib 97566c1a256d07b00848aa767e38a352 multiprocessing 61c959fc55c15c00bbb1079d6a71370b optfeature cc13a38ea4d26565e83ef21d58bcd4ab python-r1 e20b80360497e6215aed0dd4ca7d6bad python-utils-r1 969dff6876159a10dfdad9e01d265d1c toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa _md5_=7f5250b5ff62ae5ff155616d0b65204b diff --git a/metadata/md5-cache/sci-biology/blat-34-r2 b/metadata/md5-cache/sci-biology/blat-34-r2 index f487e899556d..fd40062e2812 100644 --- a/metadata/md5-cache/sci-biology/blat-34-r2 +++ b/metadata/md5-cache/sci-biology/blat-34-r2 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=blat SLOT=0 SRC_URI=http://www.soe.ucsc.edu/~kent/src/blatSrc34.zip -_eclasses_=multilib f8d35c2432bb32c4f1e779c4287b31ec toolchain-funcs e867df3870e8ff04a5b94f925be8b06a +_eclasses_=multilib 97566c1a256d07b00848aa767e38a352 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa _md5_=cfc86b588e33e0935a06563d2a9c19c0 diff --git a/metadata/md5-cache/sci-biology/bowtie-2.2.9 b/metadata/md5-cache/sci-biology/bowtie-2.2.9 index 28c5b0fefefa..3f8c65c1ac95 100644 --- a/metadata/md5-cache/sci-biology/bowtie-2.2.9 +++ b/metadata/md5-cache/sci-biology/bowtie-2.2.9 @@ -9,5 +9,5 @@ LICENSE=GPL-3 RDEPEND=dev-lang/perl tbb? ( dev-cpp/tbb ) SLOT=2 SRC_URI=mirror://sourceforge/project/bowtie-bio/bowtie2/2.2.9/bowtie2-2.2.9-source.zip -_eclasses_=multilib f8d35c2432bb32c4f1e779c4287b31ec toolchain-funcs e867df3870e8ff04a5b94f925be8b06a +_eclasses_=multilib 97566c1a256d07b00848aa767e38a352 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa _md5_=46d87c867cd445707dc1913cf3dd7eb6 diff --git a/metadata/md5-cache/sci-biology/bwa-0.7.17 b/metadata/md5-cache/sci-biology/bwa-0.7.17 index c08557155bac..608c37db6078 100644 --- a/metadata/md5-cache/sci-biology/bwa-0.7.17 +++ b/metadata/md5-cache/sci-biology/bwa-0.7.17 @@ -8,5 +8,5 @@ LICENSE=GPL-3 RDEPEND=sys-libs/zlib dev-lang/perl SLOT=0 SRC_URI=https://github.com/lh3/bwa/archive/v0.7.17.tar.gz -> bwa-0.7.17.tar.gz -_eclasses_=multilib f8d35c2432bb32c4f1e779c4287b31ec toolchain-funcs e867df3870e8ff04a5b94f925be8b06a +_eclasses_=multilib 97566c1a256d07b00848aa767e38a352 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa _md5_=620c3569e8293303737f7844385c7e82 diff --git a/metadata/md5-cache/sci-biology/cd-hit-4.6.6 b/metadata/md5-cache/sci-biology/cd-hit-4.6.6 index d9d913130693..25cc5ec524c7 100644 --- a/metadata/md5-cache/sci-biology/cd-hit-4.6.6 +++ b/metadata/md5-cache/sci-biology/cd-hit-4.6.6 @@ -8,5 +8,5 @@ LICENSE=GPL-2 RDEPEND=dev-lang/perl SLOT=0 SRC_URI=https://github.com/weizhongli/cdhit/releases/download/V4.6.6/cd-hit-v4.6.6-2016-0711.tar.gz -> cd-hit-4.6.6.tar.gz -_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic bc2e7662a4a9a8643be851982a837ddc l10n 3c7381c56a184f0dd5ba3fb824808f30 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib f8d35c2432bb32c4f1e779c4287b31ec preserve-libs dbc9f8d2d49c66467bc327fddd8317bd toolchain-funcs e867df3870e8ff04a5b94f925be8b06a vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 l10n 3c7381c56a184f0dd5ba3fb824808f30 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 97566c1a256d07b00848aa767e38a352 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=bbe0ae10275a73485487e08f19f4ac1b diff --git a/metadata/md5-cache/sci-biology/clustal-omega-1.2.4 b/metadata/md5-cache/sci-biology/clustal-omega-1.2.4 index 33ff532dfdac..12167bd33680 100644 --- a/metadata/md5-cache/sci-biology/clustal-omega-1.2.4 +++ b/metadata/md5-cache/sci-biology/clustal-omega-1.2.4 @@ -9,5 +9,5 @@ LICENSE=GPL-2 RDEPEND=dev-libs/argtable SLOT=0 SRC_URI=http://www.clustal.org/omega/clustal-omega-1.2.4.tar.gz -_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 9a53f21c753d823ba20a22f857c25cb4 gnuconfig 9f91b4b0c84e734a87492d4293f03de5 l10n 3c7381c56a184f0dd5ba3fb824808f30 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib f8d35c2432bb32c4f1e779c4287b31ec preserve-libs dbc9f8d2d49c66467bc327fddd8317bd toolchain-funcs e867df3870e8ff04a5b94f925be8b06a vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 9a53f21c753d823ba20a22f857c25cb4 gnuconfig 262062cef0ba4f22b397193da514a350 l10n 3c7381c56a184f0dd5ba3fb824808f30 libtool 241a8f577b9781a42a7421e53448a44e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 97566c1a256d07b00848aa767e38a352 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=9ade45d2e283bc5fcc7eef16725e18ae diff --git a/metadata/md5-cache/sci-biology/clustalw-1.83-r4 b/metadata/md5-cache/sci-biology/clustalw-1.83-r4 index 0f73695cd3a6..40cadd3e4128 100644 --- a/metadata/md5-cache/sci-biology/clustalw-1.83-r4 +++ b/metadata/md5-cache/sci-biology/clustalw-1.83-r4 @@ -6,5 +6,5 @@ KEYWORDS=amd64 ppc ppc64 sparc x86 ~amd64-linux ~x86-linux ~ppc-macos ~sparc-sol LICENSE=clustalw SLOT=1 SRC_URI=ftp://ftp.ebi.ac.uk/pub/software/unix/clustalw/clustalw1.83.UNIX.tar.gz -_eclasses_=multilib f8d35c2432bb32c4f1e779c4287b31ec toolchain-funcs e867df3870e8ff04a5b94f925be8b06a +_eclasses_=multilib 97566c1a256d07b00848aa767e38a352 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa _md5_=0f69889feff7a8cb3002ae5d4ea053d3 diff --git a/metadata/md5-cache/sci-biology/clustalw-mpi-0.13-r3 b/metadata/md5-cache/sci-biology/clustalw-mpi-0.13-r3 index 365867d4de92..2bb1de865a3c 100644 --- a/metadata/md5-cache/sci-biology/clustalw-mpi-0.13-r3 +++ b/metadata/md5-cache/sci-biology/clustalw-mpi-0.13-r3 @@ -9,5 +9,5 @@ LICENSE=public-domain RDEPEND=virtual/mpi SLOT=0 SRC_URI=http://web.bii.a-star.edu.sg/~kuobin/clustalw-mpi/clustalw-mpi-0.13.tar.gz -_eclasses_=multilib f8d35c2432bb32c4f1e779c4287b31ec toolchain-funcs e867df3870e8ff04a5b94f925be8b06a +_eclasses_=multilib 97566c1a256d07b00848aa767e38a352 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa _md5_=689841db0e3b7d6629b51049a2942165 diff --git a/metadata/md5-cache/sci-biology/clustalx-2.1-r3 b/metadata/md5-cache/sci-biology/clustalx-2.1-r3 index c111bfaf8da4..0c834d8c44f3 100644 --- a/metadata/md5-cache/sci-biology/clustalx-2.1-r3 +++ b/metadata/md5-cache/sci-biology/clustalx-2.1-r3 @@ -8,5 +8,5 @@ LICENSE=GPL-3 LGPL-3 RDEPEND=dev-qt/qtcore:5 dev-qt/qtgui:5 dev-qt/qtwidgets:5 dev-qt/qtxml:5 >=sci-biology/clustalw-2.1 SLOT=0 SRC_URI=http://www.clustal.org/download/current/clustalx-2.1.tar.gz https://dev.gentoo.org/~jlec/distfiles/clustalx.png.xz -_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 multilib f8d35c2432bb32c4f1e779c4287b31ec qmake-utils dc74fe3891abc25e80dad5cd3d7c6e47 toolchain-funcs e867df3870e8ff04a5b94f925be8b06a +_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 multilib 97566c1a256d07b00848aa767e38a352 qmake-utils dc74fe3891abc25e80dad5cd3d7c6e47 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa _md5_=3f60f1952758458fc3cd4e2789a942f5 diff --git a/metadata/md5-cache/sci-biology/consed-29 b/metadata/md5-cache/sci-biology/consed-29 index f7e4aebfb6a4..bc05b3d228a9 100644 --- a/metadata/md5-cache/sci-biology/consed-29 +++ b/metadata/md5-cache/sci-biology/consed-29 @@ -10,5 +10,5 @@ RDEPEND=x11-libs/libX11 x11-libs/motif:0 sci-biology/samtools:0.1-legacy dev-lan RESTRICT=fetch SLOT=0 SRC_URI=consed-29-sources.tar.gz consed-29-linux.tar.gz -_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic bc2e7662a4a9a8643be851982a837ddc l10n 3c7381c56a184f0dd5ba3fb824808f30 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib f8d35c2432bb32c4f1e779c4287b31ec preserve-libs dbc9f8d2d49c66467bc327fddd8317bd toolchain-funcs e867df3870e8ff04a5b94f925be8b06a vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 l10n 3c7381c56a184f0dd5ba3fb824808f30 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 97566c1a256d07b00848aa767e38a352 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=1e30f1827727dab34c75c8c026745369 diff --git a/metadata/md5-cache/sci-biology/dialign-tx-1.0.2-r2 b/metadata/md5-cache/sci-biology/dialign-tx-1.0.2-r2 index 6683e29a9e66..fdc0de0445d5 100644 --- a/metadata/md5-cache/sci-biology/dialign-tx-1.0.2-r2 +++ b/metadata/md5-cache/sci-biology/dialign-tx-1.0.2-r2 @@ -6,5 +6,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=LGPL-2.1 SLOT=0 SRC_URI=http://dialign-tx.gobics.de/DIALIGN-TX_1.0.2.tar.gz -_eclasses_=multilib f8d35c2432bb32c4f1e779c4287b31ec toolchain-funcs e867df3870e8ff04a5b94f925be8b06a +_eclasses_=multilib 97566c1a256d07b00848aa767e38a352 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa _md5_=b2a78c4cfa60eb348ae63d076ecb5fba diff --git a/metadata/md5-cache/sci-biology/dialign2-2.2.1 b/metadata/md5-cache/sci-biology/dialign2-2.2.1 index c64097f08708..8755ebb6054f 100644 --- a/metadata/md5-cache/sci-biology/dialign2-2.2.1 +++ b/metadata/md5-cache/sci-biology/dialign2-2.2.1 @@ -6,5 +6,5 @@ KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux LICENSE=LGPL-2.1 SLOT=0 SRC_URI=http://bibiserv.techfak.uni-bielefeld.de/applications/dialign/resources/downloads/dialign-2.2.1-src.tar.gz -_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic bc2e7662a4a9a8643be851982a837ddc l10n 3c7381c56a184f0dd5ba3fb824808f30 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib f8d35c2432bb32c4f1e779c4287b31ec preserve-libs dbc9f8d2d49c66467bc327fddd8317bd toolchain-funcs e867df3870e8ff04a5b94f925be8b06a vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 l10n 3c7381c56a184f0dd5ba3fb824808f30 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 97566c1a256d07b00848aa767e38a352 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=3761a69a47f38308f54ae0b051361ed6 diff --git a/metadata/md5-cache/sci-biology/elph-1.0.1-r1 b/metadata/md5-cache/sci-biology/elph-1.0.1-r1 index 6ef71350b6e7..80c0aaa725e0 100644 --- a/metadata/md5-cache/sci-biology/elph-1.0.1-r1 +++ b/metadata/md5-cache/sci-biology/elph-1.0.1-r1 @@ -6,5 +6,5 @@ KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux ~ppc-macos LICENSE=Artistic SLOT=0 SRC_URI=ftp://ftp.cbcb.umd.edu/pub/software/elph/ELPH-1.0.1.tar.gz -_eclasses_=multilib f8d35c2432bb32c4f1e779c4287b31ec toolchain-funcs e867df3870e8ff04a5b94f925be8b06a +_eclasses_=multilib 97566c1a256d07b00848aa767e38a352 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa _md5_=dbee2f511488caf9eadadb20d043a2da diff --git a/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660 b/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660 index 96a126b0e6c8..67b296600d58 100644 --- a/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660 +++ b/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660 @@ -10,5 +10,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/CBSTOOLS-1.0.0.660.tar.gz -> embassy-cbstools-1.0.0.660.tar.gz -_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 93f4f6ac626ed63f042344dd76574b41 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic bc2e7662a4a9a8643be851982a837ddc gnuconfig 9f91b4b0c84e734a87492d4293f03de5 l10n 3c7381c56a184f0dd5ba3fb824808f30 libtool f143db5a74ccd9ca28c1234deffede96 multilib f8d35c2432bb32c4f1e779c4287b31ec toolchain-funcs e867df3870e8ff04a5b94f925be8b06a wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 93f4f6ac626ed63f042344dd76574b41 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 gnuconfig 262062cef0ba4f22b397193da514a350 l10n 3c7381c56a184f0dd5ba3fb824808f30 libtool 241a8f577b9781a42a7421e53448a44e multilib 97566c1a256d07b00848aa767e38a352 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=77305643fe2a87a5fac7d915688baa6a diff --git a/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660 b/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660 index 8bbcdc621550..80e5ea76070a 100644 --- a/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660 +++ b/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660 @@ -10,5 +10,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=sci-biology/clustal-omega dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/CLUSTALOMEGA-1.1.0.660.tar.gz -> embassy-clustalomega-1.1.0.660.tar.gz -_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 93f4f6ac626ed63f042344dd76574b41 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic bc2e7662a4a9a8643be851982a837ddc gnuconfig 9f91b4b0c84e734a87492d4293f03de5 l10n 3c7381c56a184f0dd5ba3fb824808f30 libtool f143db5a74ccd9ca28c1234deffede96 multilib f8d35c2432bb32c4f1e779c4287b31ec toolchain-funcs e867df3870e8ff04a5b94f925be8b06a wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 93f4f6ac626ed63f042344dd76574b41 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 gnuconfig 262062cef0ba4f22b397193da514a350 l10n 3c7381c56a184f0dd5ba3fb824808f30 libtool 241a8f577b9781a42a7421e53448a44e multilib 97566c1a256d07b00848aa767e38a352 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=58b5684a48770c482660c463cca0df76 diff --git a/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660 b/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660 index bf157b29aaa9..3504219d95ee 100644 --- a/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660 +++ b/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660 @@ -10,5 +10,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMAINATRIX-0.1.660.tar.gz -> embassy-domainatrix-0.1.660.tar.gz -_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 93f4f6ac626ed63f042344dd76574b41 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic bc2e7662a4a9a8643be851982a837ddc gnuconfig 9f91b4b0c84e734a87492d4293f03de5 l10n 3c7381c56a184f0dd5ba3fb824808f30 libtool f143db5a74ccd9ca28c1234deffede96 multilib f8d35c2432bb32c4f1e779c4287b31ec toolchain-funcs e867df3870e8ff04a5b94f925be8b06a wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 93f4f6ac626ed63f042344dd76574b41 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 gnuconfig 262062cef0ba4f22b397193da514a350 l10n 3c7381c56a184f0dd5ba3fb824808f30 libtool 241a8f577b9781a42a7421e53448a44e multilib 97566c1a256d07b00848aa767e38a352 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=20f6c7abf908473570516ff49847a320 diff --git a/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660 b/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660 index 6c6fbe7a820d..4f12bb4d0c02 100644 --- a/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660 +++ b/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660 @@ -10,5 +10,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMALIGN-0.1.660.tar.gz -> embassy-domalign-0.1.660.tar.gz -_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 93f4f6ac626ed63f042344dd76574b41 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic bc2e7662a4a9a8643be851982a837ddc gnuconfig 9f91b4b0c84e734a87492d4293f03de5 l10n 3c7381c56a184f0dd5ba3fb824808f30 libtool f143db5a74ccd9ca28c1234deffede96 multilib f8d35c2432bb32c4f1e779c4287b31ec toolchain-funcs e867df3870e8ff04a5b94f925be8b06a wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 93f4f6ac626ed63f042344dd76574b41 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 gnuconfig 262062cef0ba4f22b397193da514a350 l10n 3c7381c56a184f0dd5ba3fb824808f30 libtool 241a8f577b9781a42a7421e53448a44e multilib 97566c1a256d07b00848aa767e38a352 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=fc6983ff5591fa7825d4cd99d376c861 diff --git a/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660 b/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660 index bf5273bf4409..5f76d048d1fe 100644 --- a/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660 +++ b/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660 @@ -10,5 +10,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMSEARCH-0.1.660.tar.gz -> embassy-domsearch-0.1.660.tar.gz -_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 93f4f6ac626ed63f042344dd76574b41 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic bc2e7662a4a9a8643be851982a837ddc gnuconfig 9f91b4b0c84e734a87492d4293f03de5 l10n 3c7381c56a184f0dd5ba3fb824808f30 libtool f143db5a74ccd9ca28c1234deffede96 multilib f8d35c2432bb32c4f1e779c4287b31ec toolchain-funcs e867df3870e8ff04a5b94f925be8b06a wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 93f4f6ac626ed63f042344dd76574b41 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 gnuconfig 262062cef0ba4f22b397193da514a350 l10n 3c7381c56a184f0dd5ba3fb824808f30 libtool 241a8f577b9781a42a7421e53448a44e multilib 97566c1a256d07b00848aa767e38a352 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=00bdcd88d6e9743af4531e223888195b diff --git a/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660 b/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660 index f1a246b82d71..5fbf855dfeea 100644 --- a/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660 +++ b/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660 @@ -10,5 +10,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=sys-libs/ncurses:0= dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/EMNU-1.05.660.tar.gz -> embassy-emnu-1.05.660.tar.gz -_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 93f4f6ac626ed63f042344dd76574b41 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic bc2e7662a4a9a8643be851982a837ddc gnuconfig 9f91b4b0c84e734a87492d4293f03de5 l10n 3c7381c56a184f0dd5ba3fb824808f30 libtool f143db5a74ccd9ca28c1234deffede96 multilib f8d35c2432bb32c4f1e779c4287b31ec toolchain-funcs e867df3870e8ff04a5b94f925be8b06a wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 93f4f6ac626ed63f042344dd76574b41 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 gnuconfig 262062cef0ba4f22b397193da514a350 l10n 3c7381c56a184f0dd5ba3fb824808f30 libtool 241a8f577b9781a42a7421e53448a44e multilib 97566c1a256d07b00848aa767e38a352 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=54738204e5b5aeb9aa0216f7c53c77df diff --git a/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660 b/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660 index 6a59e51b67b1..4847fed7b7c6 100644 --- a/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660 +++ b/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660 @@ -10,5 +10,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/ESIM4-1.0.0.660.tar.gz -> embassy-esim4-1.0.0.660.tar.gz -_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 93f4f6ac626ed63f042344dd76574b41 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic bc2e7662a4a9a8643be851982a837ddc gnuconfig 9f91b4b0c84e734a87492d4293f03de5 l10n 3c7381c56a184f0dd5ba3fb824808f30 libtool f143db5a74ccd9ca28c1234deffede96 multilib f8d35c2432bb32c4f1e779c4287b31ec toolchain-funcs e867df3870e8ff04a5b94f925be8b06a wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 93f4f6ac626ed63f042344dd76574b41 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 gnuconfig 262062cef0ba4f22b397193da514a350 l10n 3c7381c56a184f0dd5ba3fb824808f30 libtool 241a8f577b9781a42a7421e53448a44e multilib 97566c1a256d07b00848aa767e38a352 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=63d13362b3c8b045b78ed452697b59f3 diff --git a/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660 b/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660 index 2693020bba92..c3db3c0b32e9 100644 --- a/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660 +++ b/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660 @@ -10,5 +10,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=sci-biology/hmmer:2 dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/HMMER-2.3.2.660.tar.gz -> embassy-hmmer-2.3.2.660.tar.gz -_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 93f4f6ac626ed63f042344dd76574b41 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic bc2e7662a4a9a8643be851982a837ddc gnuconfig 9f91b4b0c84e734a87492d4293f03de5 l10n 3c7381c56a184f0dd5ba3fb824808f30 libtool f143db5a74ccd9ca28c1234deffede96 multilib f8d35c2432bb32c4f1e779c4287b31ec toolchain-funcs e867df3870e8ff04a5b94f925be8b06a wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 93f4f6ac626ed63f042344dd76574b41 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 gnuconfig 262062cef0ba4f22b397193da514a350 l10n 3c7381c56a184f0dd5ba3fb824808f30 libtool 241a8f577b9781a42a7421e53448a44e multilib 97566c1a256d07b00848aa767e38a352 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=c5399e3d4e7e59aaa70e6477a41a7345 diff --git a/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660 b/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660 index d6ef7c37ecbe..f99a013400bc 100644 --- a/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660 +++ b/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660 @@ -10,5 +10,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/IPRSCAN-4.3.1.660.tar.gz -> embassy-iprscan-4.3.1.660.tar.gz -_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 93f4f6ac626ed63f042344dd76574b41 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic bc2e7662a4a9a8643be851982a837ddc gnuconfig 9f91b4b0c84e734a87492d4293f03de5 l10n 3c7381c56a184f0dd5ba3fb824808f30 libtool f143db5a74ccd9ca28c1234deffede96 multilib f8d35c2432bb32c4f1e779c4287b31ec toolchain-funcs e867df3870e8ff04a5b94f925be8b06a wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 93f4f6ac626ed63f042344dd76574b41 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 gnuconfig 262062cef0ba4f22b397193da514a350 l10n 3c7381c56a184f0dd5ba3fb824808f30 libtool 241a8f577b9781a42a7421e53448a44e multilib 97566c1a256d07b00848aa767e38a352 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=88c3ac6be6849f4230f25bf463931561 diff --git a/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660 b/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660 index f260ecf65c95..f55ed535fe7e 100644 --- a/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660 +++ b/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660 @@ -10,5 +10,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=sys-libs/ncurses:0= dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/MSE-3.0.0.660.tar.gz -> embassy-mse-3.0.0.660.tar.gz -_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 93f4f6ac626ed63f042344dd76574b41 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic bc2e7662a4a9a8643be851982a837ddc gnuconfig 9f91b4b0c84e734a87492d4293f03de5 l10n 3c7381c56a184f0dd5ba3fb824808f30 libtool f143db5a74ccd9ca28c1234deffede96 multilib f8d35c2432bb32c4f1e779c4287b31ec toolchain-funcs e867df3870e8ff04a5b94f925be8b06a wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 93f4f6ac626ed63f042344dd76574b41 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 gnuconfig 262062cef0ba4f22b397193da514a350 l10n 3c7381c56a184f0dd5ba3fb824808f30 libtool 241a8f577b9781a42a7421e53448a44e multilib 97566c1a256d07b00848aa767e38a352 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=c9843cceb68b918a80ed15c2043942d3 diff --git a/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660 b/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660 index 290394e443fb..e3ddb5494ed5 100644 --- a/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660 +++ b/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660 @@ -10,5 +10,5 @@ LICENSE=LGPL-2 GPL-2 free-noncomm RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/PHYLIPNEW-3.69.660.tar.gz -> embassy-phylipnew-3.69.660.tar.gz -_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 93f4f6ac626ed63f042344dd76574b41 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic bc2e7662a4a9a8643be851982a837ddc gnuconfig 9f91b4b0c84e734a87492d4293f03de5 l10n 3c7381c56a184f0dd5ba3fb824808f30 libtool f143db5a74ccd9ca28c1234deffede96 multilib f8d35c2432bb32c4f1e779c4287b31ec toolchain-funcs e867df3870e8ff04a5b94f925be8b06a wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 93f4f6ac626ed63f042344dd76574b41 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 gnuconfig 262062cef0ba4f22b397193da514a350 l10n 3c7381c56a184f0dd5ba3fb824808f30 libtool 241a8f577b9781a42a7421e53448a44e multilib 97566c1a256d07b00848aa767e38a352 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=9ecb2590e9a1ae2353dafa387e89d48c diff --git a/metadata/md5-cache/sci-biology/embassy-signature-0.1.660 b/metadata/md5-cache/sci-biology/embassy-signature-0.1.660 index a80ba6dd825d..12aefe094a6e 100644 --- a/metadata/md5-cache/sci-biology/embassy-signature-0.1.660 +++ b/metadata/md5-cache/sci-biology/embassy-signature-0.1.660 @@ -10,5 +10,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/SIGNATURE-0.1.660.tar.gz -> embassy-signature-0.1.660.tar.gz -_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 93f4f6ac626ed63f042344dd76574b41 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic bc2e7662a4a9a8643be851982a837ddc gnuconfig 9f91b4b0c84e734a87492d4293f03de5 l10n 3c7381c56a184f0dd5ba3fb824808f30 libtool f143db5a74ccd9ca28c1234deffede96 multilib f8d35c2432bb32c4f1e779c4287b31ec toolchain-funcs e867df3870e8ff04a5b94f925be8b06a wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 93f4f6ac626ed63f042344dd76574b41 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 gnuconfig 262062cef0ba4f22b397193da514a350 l10n 3c7381c56a184f0dd5ba3fb824808f30 libtool 241a8f577b9781a42a7421e53448a44e multilib 97566c1a256d07b00848aa767e38a352 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=0be4d65f424916bbe6d7f507fed3014f diff --git a/metadata/md5-cache/sci-biology/embassy-structure-0.1.660 b/metadata/md5-cache/sci-biology/embassy-structure-0.1.660 index 43877a307771..35f3c304e6e6 100644 --- a/metadata/md5-cache/sci-biology/embassy-structure-0.1.660 +++ b/metadata/md5-cache/sci-biology/embassy-structure-0.1.660 @@ -10,5 +10,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/STRUCTURE-0.1.660.tar.gz -> embassy-structure-0.1.660.tar.gz -_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 93f4f6ac626ed63f042344dd76574b41 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic bc2e7662a4a9a8643be851982a837ddc gnuconfig 9f91b4b0c84e734a87492d4293f03de5 l10n 3c7381c56a184f0dd5ba3fb824808f30 libtool f143db5a74ccd9ca28c1234deffede96 multilib f8d35c2432bb32c4f1e779c4287b31ec toolchain-funcs e867df3870e8ff04a5b94f925be8b06a wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 93f4f6ac626ed63f042344dd76574b41 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 gnuconfig 262062cef0ba4f22b397193da514a350 l10n 3c7381c56a184f0dd5ba3fb824808f30 libtool 241a8f577b9781a42a7421e53448a44e multilib 97566c1a256d07b00848aa767e38a352 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=a0f67c8d9181b193f43eb5e99fdbe92f diff --git a/metadata/md5-cache/sci-biology/embassy-topo-2.0.660 b/metadata/md5-cache/sci-biology/embassy-topo-2.0.660 index 3ec6f6094b79..9aa374c86692 100644 --- a/metadata/md5-cache/sci-biology/embassy-topo-2.0.660 +++ b/metadata/md5-cache/sci-biology/embassy-topo-2.0.660 @@ -10,5 +10,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/TOPO-2.0.660.tar.gz -> embassy-topo-2.0.660.tar.gz -_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 93f4f6ac626ed63f042344dd76574b41 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic bc2e7662a4a9a8643be851982a837ddc gnuconfig 9f91b4b0c84e734a87492d4293f03de5 l10n 3c7381c56a184f0dd5ba3fb824808f30 libtool f143db5a74ccd9ca28c1234deffede96 multilib f8d35c2432bb32c4f1e779c4287b31ec toolchain-funcs e867df3870e8ff04a5b94f925be8b06a wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 93f4f6ac626ed63f042344dd76574b41 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 gnuconfig 262062cef0ba4f22b397193da514a350 l10n 3c7381c56a184f0dd5ba3fb824808f30 libtool 241a8f577b9781a42a7421e53448a44e multilib 97566c1a256d07b00848aa767e38a352 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=9ecbee609930ce8d1c14b72746c0ff64 diff --git a/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660 b/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660 index 8dc3a076c58f..92d87d987e4a 100644 --- a/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660 +++ b/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660 @@ -10,5 +10,5 @@ LICENSE=LGPL-2 GPL-2 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=] SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/VIENNA-1.7.2.660.tar.gz -> embassy-vienna-1.7.2.660.tar.gz -_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 93f4f6ac626ed63f042344dd76574b41 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic bc2e7662a4a9a8643be851982a837ddc gnuconfig 9f91b4b0c84e734a87492d4293f03de5 l10n 3c7381c56a184f0dd5ba3fb824808f30 libtool f143db5a74ccd9ca28c1234deffede96 multilib f8d35c2432bb32c4f1e779c4287b31ec toolchain-funcs e867df3870e8ff04a5b94f925be8b06a wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 93f4f6ac626ed63f042344dd76574b41 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 gnuconfig 262062cef0ba4f22b397193da514a350 l10n 3c7381c56a184f0dd5ba3fb824808f30 libtool 241a8f577b9781a42a7421e53448a44e multilib 97566c1a256d07b00848aa767e38a352 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=bbce91d6a8900865a446cb3dea302ccf diff --git a/metadata/md5-cache/sci-biology/emboss-6.6.0-r1 b/metadata/md5-cache/sci-biology/emboss-6.6.0-r1 index f29d8d1d7446..9867699fab77 100644 --- a/metadata/md5-cache/sci-biology/emboss-6.6.0-r1 +++ b/metadata/md5-cache/sci-biology/emboss-6.6.0-r1 @@ -11,5 +11,5 @@ PDEPEND=!minimal? ( sci-biology/aaindex sci-biology/cutg sci-biology/primer3 sci RDEPEND=!games-action/xbomber !sys-devel/cons dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) SLOT=0 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-6.6.0.tar.gz -_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 93f4f6ac626ed63f042344dd76574b41 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic bc2e7662a4a9a8643be851982a837ddc gnuconfig 9f91b4b0c84e734a87492d4293f03de5 l10n 3c7381c56a184f0dd5ba3fb824808f30 libtool f143db5a74ccd9ca28c1234deffede96 multilib f8d35c2432bb32c4f1e779c4287b31ec readme.gentoo-r1 e51390d48521eb3d400db57d557b7530 toolchain-funcs e867df3870e8ff04a5b94f925be8b06a wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 edos2unix 33e347e171066657f91f8b0c72ec8773 emboss-r2 93f4f6ac626ed63f042344dd76574b41 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 gnuconfig 262062cef0ba4f22b397193da514a350 l10n 3c7381c56a184f0dd5ba3fb824808f30 libtool 241a8f577b9781a42a7421e53448a44e multilib 97566c1a256d07b00848aa767e38a352 readme.gentoo-r1 e51390d48521eb3d400db57d557b7530 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=72c86b427ea83b8feb792884f23feaf3 diff --git a/metadata/md5-cache/sci-biology/eugene-4.1d b/metadata/md5-cache/sci-biology/eugene-4.1d index 9e7d7e63c326..32f5f2d4c42f 100644 --- a/metadata/md5-cache/sci-biology/eugene-4.1d +++ b/metadata/md5-cache/sci-biology/eugene-4.1d @@ -9,5 +9,5 @@ RDEPEND=media-libs/gd[png] media-libs/libpng:0= RESTRICT=test SLOT=0 SRC_URI=https://mulcyber.toulouse.inra.fr/frs/download.php/1359/eugene-4.1d.tar.gz -_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 9a53f21c753d823ba20a22f857c25cb4 gnuconfig 9f91b4b0c84e734a87492d4293f03de5 l10n 3c7381c56a184f0dd5ba3fb824808f30 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib f8d35c2432bb32c4f1e779c4287b31ec preserve-libs dbc9f8d2d49c66467bc327fddd8317bd toolchain-funcs e867df3870e8ff04a5b94f925be8b06a vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 9a53f21c753d823ba20a22f857c25cb4 gnuconfig 262062cef0ba4f22b397193da514a350 l10n 3c7381c56a184f0dd5ba3fb824808f30 libtool 241a8f577b9781a42a7421e53448a44e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 97566c1a256d07b00848aa767e38a352 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=683d1e7f9daeda6cd20b92117330ea81 diff --git a/metadata/md5-cache/sci-biology/exonerate-2.2.0-r2 b/metadata/md5-cache/sci-biology/exonerate-2.2.0-r2 index 90f024d19d9a..19187eaa3fd6 100644 --- a/metadata/md5-cache/sci-biology/exonerate-2.2.0-r2 +++ b/metadata/md5-cache/sci-biology/exonerate-2.2.0-r2 @@ -11,5 +11,5 @@ REQUIRED_USE=test? ( utils ) RESTRICT=!test? ( test ) SLOT=0 SRC_URI=http://ftp.ebi.ac.uk/pub/software/vertebrategenomics/exonerate/exonerate-2.2.0.tar.gz -_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 9a53f21c753d823ba20a22f857c25cb4 gnuconfig 9f91b4b0c84e734a87492d4293f03de5 l10n 3c7381c56a184f0dd5ba3fb824808f30 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib f8d35c2432bb32c4f1e779c4287b31ec preserve-libs dbc9f8d2d49c66467bc327fddd8317bd toolchain-funcs e867df3870e8ff04a5b94f925be8b06a vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 9a53f21c753d823ba20a22f857c25cb4 gnuconfig 262062cef0ba4f22b397193da514a350 l10n 3c7381c56a184f0dd5ba3fb824808f30 libtool 241a8f577b9781a42a7421e53448a44e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 97566c1a256d07b00848aa767e38a352 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=05c99b447503c7a3fae4594cd126939a diff --git a/metadata/md5-cache/sci-biology/express-1.5.1 b/metadata/md5-cache/sci-biology/express-1.5.1 index 368f77f7ac12..bc06c2d52038 100644 --- a/metadata/md5-cache/sci-biology/express-1.5.1 +++ b/metadata/md5-cache/sci-biology/express-1.5.1 @@ -9,5 +9,5 @@ LICENSE=Artistic RDEPEND=>=dev-libs/boost-1.52.0:= dev-libs/protobuf dev-util/google-perftools sci-biology/bamtools sys-libs/zlib SLOT=0 SRC_URI=https://pachterlab.github.io/eXpress/downloads/express-1.5.1/express-1.5.1-src.tgz -_eclasses_=cmake 518e4c9a6a38dfd7afc54b6a7c5de3da edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic bc2e7662a4a9a8643be851982a837ddc l10n 3c7381c56a184f0dd5ba3fb824808f30 multilib f8d35c2432bb32c4f1e779c4287b31ec multiprocessing 61c959fc55c15c00bbb1079d6a71370b ninja-utils 132cbb376048d079b5a012f5467c4e7f toolchain-funcs e867df3870e8ff04a5b94f925be8b06a wrapper 4251d4c84c25f59094fd557e0063a974 xdg-utils ff2ff954e6b17929574eee4efc5152ba +_eclasses_=cmake 518e4c9a6a38dfd7afc54b6a7c5de3da edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 l10n 3c7381c56a184f0dd5ba3fb824808f30 multilib 97566c1a256d07b00848aa767e38a352 multiprocessing 61c959fc55c15c00bbb1079d6a71370b ninja-utils 132cbb376048d079b5a012f5467c4e7f toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa wrapper 4251d4c84c25f59094fd557e0063a974 xdg-utils ff2ff954e6b17929574eee4efc5152ba _md5_=b4fcbc714ea460615318f4baa4bc347a diff --git a/metadata/md5-cache/sci-biology/fasta-36.3.5e b/metadata/md5-cache/sci-biology/fasta-36.3.5e index 81b1ccfb77e7..4109bb4d2dee 100644 --- a/metadata/md5-cache/sci-biology/fasta-36.3.5e +++ b/metadata/md5-cache/sci-biology/fasta-36.3.5e @@ -9,5 +9,5 @@ LICENSE=fasta RESTRICT=!test? ( test ) SLOT=0 SRC_URI=http://faculty.virginia.edu/wrpearson/fasta/fasta36/fasta-36.3.5e.tar.gz -_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic bc2e7662a4a9a8643be851982a837ddc l10n 3c7381c56a184f0dd5ba3fb824808f30 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib f8d35c2432bb32c4f1e779c4287b31ec preserve-libs dbc9f8d2d49c66467bc327fddd8317bd toolchain-funcs e867df3870e8ff04a5b94f925be8b06a vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 l10n 3c7381c56a184f0dd5ba3fb824808f30 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 97566c1a256d07b00848aa767e38a352 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=43c2cf221a4fd397bebdbe11749a1707 diff --git a/metadata/md5-cache/sci-biology/fasttree-2.1.11 b/metadata/md5-cache/sci-biology/fasttree-2.1.11 index 8b7011e4c139..fdcbfb715d17 100644 --- a/metadata/md5-cache/sci-biology/fasttree-2.1.11 +++ b/metadata/md5-cache/sci-biology/fasttree-2.1.11 @@ -9,5 +9,5 @@ LICENSE=GPL-2 REQUIRED_USE=?? ( double-precision cpu_flags_x86_sse3 ) SLOT=0 SRC_URI=http://www.microbesonline.org/fasttree/FastTree-2.1.11.c http://www.microbesonline.org/fasttree/FastTreeUPGMA.c -> FastTreeUPGMA-2.1.11.c http://www.microbesonline.org/fasttree/MOTreeComparison.tar.gz -> MOTreeComparison-2.1.11.tar.gz -_eclasses_=cmake 518e4c9a6a38dfd7afc54b6a7c5de3da edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic bc2e7662a4a9a8643be851982a837ddc l10n 3c7381c56a184f0dd5ba3fb824808f30 multilib f8d35c2432bb32c4f1e779c4287b31ec multiprocessing 61c959fc55c15c00bbb1079d6a71370b ninja-utils 132cbb376048d079b5a012f5467c4e7f toolchain-funcs e867df3870e8ff04a5b94f925be8b06a wrapper 4251d4c84c25f59094fd557e0063a974 xdg-utils ff2ff954e6b17929574eee4efc5152ba +_eclasses_=cmake 518e4c9a6a38dfd7afc54b6a7c5de3da edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 l10n 3c7381c56a184f0dd5ba3fb824808f30 multilib 97566c1a256d07b00848aa767e38a352 multiprocessing 61c959fc55c15c00bbb1079d6a71370b ninja-utils 132cbb376048d079b5a012f5467c4e7f toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa wrapper 4251d4c84c25f59094fd557e0063a974 xdg-utils ff2ff954e6b17929574eee4efc5152ba _md5_=4a94b8db43f0aadb5ece67757ccbe635 diff --git a/metadata/md5-cache/sci-biology/fastx_toolkit-0.0.14 b/metadata/md5-cache/sci-biology/fastx_toolkit-0.0.14 index c70519383460..2746c2943614 100644 --- a/metadata/md5-cache/sci-biology/fastx_toolkit-0.0.14 +++ b/metadata/md5-cache/sci-biology/fastx_toolkit-0.0.14 @@ -8,5 +8,5 @@ LICENSE=AGPL-3 RDEPEND=dev-perl/PerlIO-gzip dev-perl/GDGraph sci-biology/libgtextutils:= sci-visualization/gnuplot SLOT=0 SRC_URI=https://github.com/agordon/fastx_toolkit/releases/download/0.0.14/fastx_toolkit-0.0.14.tar.bz2 -_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 9a53f21c753d823ba20a22f857c25cb4 gnuconfig 9f91b4b0c84e734a87492d4293f03de5 l10n 3c7381c56a184f0dd5ba3fb824808f30 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib f8d35c2432bb32c4f1e779c4287b31ec preserve-libs dbc9f8d2d49c66467bc327fddd8317bd toolchain-funcs e867df3870e8ff04a5b94f925be8b06a vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 9a53f21c753d823ba20a22f857c25cb4 gnuconfig 262062cef0ba4f22b397193da514a350 l10n 3c7381c56a184f0dd5ba3fb824808f30 libtool 241a8f577b9781a42a7421e53448a44e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 97566c1a256d07b00848aa767e38a352 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=c3bb0edd6b01a31019cf5fd59e22122a diff --git a/metadata/md5-cache/sci-biology/foldingathome-7.6.13 b/metadata/md5-cache/sci-biology/foldingathome-7.6.13 index 3059d830a933..50014bdd612e 100644 --- a/metadata/md5-cache/sci-biology/foldingathome-7.6.13 +++ b/metadata/md5-cache/sci-biology/foldingathome-7.6.13 @@ -10,5 +10,5 @@ RDEPEND=app-arch/bzip2 || ( dev-libs/openssl-compat:1.0.0 =dev-libs/openssl-1.0* RESTRICT=mirror bindist strip SLOT=0 SRC_URI=https://download.foldingathome.org/releases/public/release/fahclient/centos-6.7-64bit/v7.6/fahclient_7.6.13-64bit-release.tar.bz2 -_eclasses_=multilib f8d35c2432bb32c4f1e779c4287b31ec systemd fdf0d765c3f11f91fe54f8def9a8c0e6 toolchain-funcs e867df3870e8ff04a5b94f925be8b06a user 527b8f84a662e996f692f97ffd2c893a user-info 8eda7e0ed7acb4b9678bea151579e154 +_eclasses_=multilib 97566c1a256d07b00848aa767e38a352 systemd fdf0d765c3f11f91fe54f8def9a8c0e6 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa user 527b8f84a662e996f692f97ffd2c893a user-info 8eda7e0ed7acb4b9678bea151579e154 _md5_=35efc85acab21d56c5bb97f30da7e0f8 diff --git a/metadata/md5-cache/sci-biology/gibbs-3.1 b/metadata/md5-cache/sci-biology/gibbs-3.1 index 857ca5e4a700..e1ccd31bd807 100644 --- a/metadata/md5-cache/sci-biology/gibbs-3.1 +++ b/metadata/md5-cache/sci-biology/gibbs-3.1 @@ -10,5 +10,5 @@ LICENSE=GPL-2 RDEPEND=mpi? ( virtual/mpi sys-cluster/mpe2 ) SLOT=0 SRC_URI=mirror://gentoo/gibbs-3.1.tar.gz -_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 gnuconfig 9f91b4b0c84e734a87492d4293f03de5 libtool f143db5a74ccd9ca28c1234deffede96 multilib f8d35c2432bb32c4f1e779c4287b31ec toolchain-funcs e867df3870e8ff04a5b94f925be8b06a +_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib 97566c1a256d07b00848aa767e38a352 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa _md5_=8d48efee68d1063803fccbc4c73a0f5d diff --git a/metadata/md5-cache/sci-biology/glimmer-3.02b b/metadata/md5-cache/sci-biology/glimmer-3.02b index 8d9f7f78bff1..ae9c12c29527 100644 --- a/metadata/md5-cache/sci-biology/glimmer-3.02b +++ b/metadata/md5-cache/sci-biology/glimmer-3.02b @@ -7,5 +7,5 @@ LICENSE=Artistic RDEPEND=app-shells/tcsh sci-biology/elph SLOT=0 SRC_URI=https://ccb.jhu.edu/software/glimmer/glimmer302b.tar.gz -_eclasses_=multilib f8d35c2432bb32c4f1e779c4287b31ec toolchain-funcs e867df3870e8ff04a5b94f925be8b06a +_eclasses_=multilib 97566c1a256d07b00848aa767e38a352 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa _md5_=f30d3e570cfa5c3e8efb2a7c44bc15e7 diff --git a/metadata/md5-cache/sci-biology/glimmerhmm-3.0.1-r1 b/metadata/md5-cache/sci-biology/glimmerhmm-3.0.1-r1 index bd8481290a86..2d6290d19ee7 100644 --- a/metadata/md5-cache/sci-biology/glimmerhmm-3.0.1-r1 +++ b/metadata/md5-cache/sci-biology/glimmerhmm-3.0.1-r1 @@ -6,5 +6,5 @@ KEYWORDS=amd64 x86 LICENSE=Artistic SLOT=0 SRC_URI=ftp://ftp.cbcb.umd.edu/pub/software/glimmerhmm/GlimmerHMM-3.0.1.tar.gz -_eclasses_=multilib f8d35c2432bb32c4f1e779c4287b31ec toolchain-funcs e867df3870e8ff04a5b94f925be8b06a +_eclasses_=multilib 97566c1a256d07b00848aa767e38a352 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa _md5_=9fc33629a982f35b93c18da772894fdd diff --git a/metadata/md5-cache/sci-biology/iedera-1.05-r1 b/metadata/md5-cache/sci-biology/iedera-1.05-r1 index 59e6f3d4c29b..8a527b7b3dd7 100644 --- a/metadata/md5-cache/sci-biology/iedera-1.05-r1 +++ b/metadata/md5-cache/sci-biology/iedera-1.05-r1 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=http://bioinfo.lifl.fr/yass/files/iedera-1.05.tar.gz -_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 9a53f21c753d823ba20a22f857c25cb4 gnuconfig 9f91b4b0c84e734a87492d4293f03de5 l10n 3c7381c56a184f0dd5ba3fb824808f30 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib f8d35c2432bb32c4f1e779c4287b31ec preserve-libs dbc9f8d2d49c66467bc327fddd8317bd toolchain-funcs e867df3870e8ff04a5b94f925be8b06a vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 9a53f21c753d823ba20a22f857c25cb4 gnuconfig 262062cef0ba4f22b397193da514a350 l10n 3c7381c56a184f0dd5ba3fb824808f30 libtool 241a8f577b9781a42a7421e53448a44e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 97566c1a256d07b00848aa767e38a352 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=ce77e1e27bd52fed2fd2af52744d6288 diff --git a/metadata/md5-cache/sci-biology/infernal-1.0.2-r1 b/metadata/md5-cache/sci-biology/infernal-1.0.2-r1 index bda80b40d2a1..b8dba5a3b55c 100644 --- a/metadata/md5-cache/sci-biology/infernal-1.0.2-r1 +++ b/metadata/md5-cache/sci-biology/infernal-1.0.2-r1 @@ -9,5 +9,5 @@ LICENSE=GPL-3 RDEPEND=mpi? ( virtual/mpi ) SLOT=0 SRC_URI=ftp://selab.janelia.org/pub/software/infernal/infernal-1.0.2.tar.gz -_eclasses_=multilib f8d35c2432bb32c4f1e779c4287b31ec toolchain-funcs e867df3870e8ff04a5b94f925be8b06a +_eclasses_=multilib 97566c1a256d07b00848aa767e38a352 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa _md5_=a3b1f788e8f5b38e41b3a9e38f91fe88 diff --git a/metadata/md5-cache/sci-biology/kalign-2.03-r2 b/metadata/md5-cache/sci-biology/kalign-2.03-r2 index b7848791ab19..0d96744bb45f 100644 --- a/metadata/md5-cache/sci-biology/kalign-2.03-r2 +++ b/metadata/md5-cache/sci-biology/kalign-2.03-r2 @@ -6,5 +6,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=mirror://debian/pool/main/k/kalign/kalign_2.03.orig.tar.gz -_eclasses_=multilib f8d35c2432bb32c4f1e779c4287b31ec toolchain-funcs e867df3870e8ff04a5b94f925be8b06a +_eclasses_=multilib 97566c1a256d07b00848aa767e38a352 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa _md5_=175d26382226c7bed2b44be485b01d01 diff --git a/metadata/md5-cache/sci-biology/kallisto-0.46.2 b/metadata/md5-cache/sci-biology/kallisto-0.46.2 index 7bbe56865288..2c5a256868c1 100644 --- a/metadata/md5-cache/sci-biology/kallisto-0.46.2 +++ b/metadata/md5-cache/sci-biology/kallisto-0.46.2 @@ -11,5 +11,5 @@ RDEPEND=sci-libs/htslib:= sys-libs/zlib:= hdf5? ( sci-libs/hdf5:= ) RESTRICT=!test? ( test ) SLOT=0 SRC_URI=https://github.com/pachterlab/kallisto/archive/v0.46.2.tar.gz -> kallisto-0.46.2.tar.gz -_eclasses_=cmake 518e4c9a6a38dfd7afc54b6a7c5de3da edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic bc2e7662a4a9a8643be851982a837ddc l10n 3c7381c56a184f0dd5ba3fb824808f30 multilib f8d35c2432bb32c4f1e779c4287b31ec multiprocessing 61c959fc55c15c00bbb1079d6a71370b ninja-utils 132cbb376048d079b5a012f5467c4e7f toolchain-funcs e867df3870e8ff04a5b94f925be8b06a wrapper 4251d4c84c25f59094fd557e0063a974 xdg-utils ff2ff954e6b17929574eee4efc5152ba +_eclasses_=cmake 518e4c9a6a38dfd7afc54b6a7c5de3da edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 l10n 3c7381c56a184f0dd5ba3fb824808f30 multilib 97566c1a256d07b00848aa767e38a352 multiprocessing 61c959fc55c15c00bbb1079d6a71370b ninja-utils 132cbb376048d079b5a012f5467c4e7f toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa wrapper 4251d4c84c25f59094fd557e0063a974 xdg-utils ff2ff954e6b17929574eee4efc5152ba _md5_=1b739cad0275e6dc5a320723611b78e9 diff --git a/metadata/md5-cache/sci-biology/lagan-2.0-r4 b/metadata/md5-cache/sci-biology/lagan-2.0-r4 index c459cbf9ae68..a275094a7141 100644 --- a/metadata/md5-cache/sci-biology/lagan-2.0-r4 +++ b/metadata/md5-cache/sci-biology/lagan-2.0-r4 @@ -7,5 +7,5 @@ LICENSE=GPL-2 RDEPEND=dev-lang/perl SLOT=0 SRC_URI=http://lagan.stanford.edu/lagan_web/lagan20.tar.gz -_eclasses_=multilib f8d35c2432bb32c4f1e779c4287b31ec toolchain-funcs e867df3870e8ff04a5b94f925be8b06a +_eclasses_=multilib 97566c1a256d07b00848aa767e38a352 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa _md5_=c4b4e347541c85d423cac28e03a104d4 diff --git a/metadata/md5-cache/sci-biology/libgtextutils-0.6.1 b/metadata/md5-cache/sci-biology/libgtextutils-0.6.1 index 8a2c7893859d..af4a59930a0e 100644 --- a/metadata/md5-cache/sci-biology/libgtextutils-0.6.1 +++ b/metadata/md5-cache/sci-biology/libgtextutils-0.6.1 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=AGPL-3 SLOT=0/0 SRC_URI=http://hannonlab.cshl.edu/fastx_toolkit/libgtextutils-0.6.1.tar.bz2 -_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 9a53f21c753d823ba20a22f857c25cb4 gnuconfig 9f91b4b0c84e734a87492d4293f03de5 l10n 3c7381c56a184f0dd5ba3fb824808f30 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib f8d35c2432bb32c4f1e779c4287b31ec preserve-libs dbc9f8d2d49c66467bc327fddd8317bd toolchain-funcs e867df3870e8ff04a5b94f925be8b06a vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 9a53f21c753d823ba20a22f857c25cb4 gnuconfig 262062cef0ba4f22b397193da514a350 l10n 3c7381c56a184f0dd5ba3fb824808f30 libtool 241a8f577b9781a42a7421e53448a44e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 97566c1a256d07b00848aa767e38a352 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=867c9b9e4eee26ad2a76ff6ff0594f52 diff --git a/metadata/md5-cache/sci-biology/mafft-7.305 b/metadata/md5-cache/sci-biology/mafft-7.305 index eea8406d2cda..584d033a6e7b 100644 --- a/metadata/md5-cache/sci-biology/mafft-7.305 +++ b/metadata/md5-cache/sci-biology/mafft-7.305 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux ~x64-macos LICENSE=BSD SLOT=0 SRC_URI=https://mafft.cbrc.jp/alignment/software/mafft-7.305-without-extensions-src.tgz -_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic bc2e7662a4a9a8643be851982a837ddc l10n 3c7381c56a184f0dd5ba3fb824808f30 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib f8d35c2432bb32c4f1e779c4287b31ec preserve-libs dbc9f8d2d49c66467bc327fddd8317bd toolchain-funcs e867df3870e8ff04a5b94f925be8b06a vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 l10n 3c7381c56a184f0dd5ba3fb824808f30 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 97566c1a256d07b00848aa767e38a352 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=0f3bc4071e292477254a6b10ab15b328 diff --git a/metadata/md5-cache/sci-biology/maq-0.7.1-r2 b/metadata/md5-cache/sci-biology/maq-0.7.1-r2 index 851deea64175..a326bc3a97b6 100644 --- a/metadata/md5-cache/sci-biology/maq-0.7.1-r2 +++ b/metadata/md5-cache/sci-biology/maq-0.7.1-r2 @@ -8,5 +8,5 @@ LICENSE=GPL-3 RDEPEND=sys-libs/zlib SLOT=0 SRC_URI=mirror://sourceforge/maq/maq-0.7.1.tar.bz2 mirror://sourceforge/maq/calib-36.dat.gz -_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 9a53f21c753d823ba20a22f857c25cb4 gnuconfig 9f91b4b0c84e734a87492d4293f03de5 l10n 3c7381c56a184f0dd5ba3fb824808f30 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib f8d35c2432bb32c4f1e779c4287b31ec preserve-libs dbc9f8d2d49c66467bc327fddd8317bd toolchain-funcs e867df3870e8ff04a5b94f925be8b06a vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 9a53f21c753d823ba20a22f857c25cb4 gnuconfig 262062cef0ba4f22b397193da514a350 l10n 3c7381c56a184f0dd5ba3fb824808f30 libtool 241a8f577b9781a42a7421e53448a44e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 97566c1a256d07b00848aa767e38a352 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=39ffb0025210075a8d7d7f6f81f8da56 diff --git a/metadata/md5-cache/sci-biology/maqview-0.2.5-r3 b/metadata/md5-cache/sci-biology/maqview-0.2.5-r3 index da6d9421128b..13aac74f6786 100644 --- a/metadata/md5-cache/sci-biology/maqview-0.2.5-r3 +++ b/metadata/md5-cache/sci-biology/maqview-0.2.5-r3 @@ -8,5 +8,5 @@ LICENSE=GPL-3 RDEPEND=media-libs/freeglut sys-libs/zlib sci-biology/maq SLOT=0 SRC_URI=mirror://sourceforge/maq/maqview-0.2.5.tar.gz -_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 9a53f21c753d823ba20a22f857c25cb4 gnuconfig 9f91b4b0c84e734a87492d4293f03de5 l10n 3c7381c56a184f0dd5ba3fb824808f30 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib f8d35c2432bb32c4f1e779c4287b31ec preserve-libs dbc9f8d2d49c66467bc327fddd8317bd toolchain-funcs e867df3870e8ff04a5b94f925be8b06a vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 9a53f21c753d823ba20a22f857c25cb4 gnuconfig 262062cef0ba4f22b397193da514a350 l10n 3c7381c56a184f0dd5ba3fb824808f30 libtool 241a8f577b9781a42a7421e53448a44e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 97566c1a256d07b00848aa767e38a352 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=dee50558d10e75ff9e96f4c3f177c55f diff --git a/metadata/md5-cache/sci-biology/mcl-14.137 b/metadata/md5-cache/sci-biology/mcl-14.137 index 75c1912cdb10..3b45860090ca 100644 --- a/metadata/md5-cache/sci-biology/mcl-14.137 +++ b/metadata/md5-cache/sci-biology/mcl-14.137 @@ -8,5 +8,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=http://micans.org/mcl/src/mcl-14-137.tar.gz -_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 gnuconfig 9f91b4b0c84e734a87492d4293f03de5 libtool f143db5a74ccd9ca28c1234deffede96 multilib f8d35c2432bb32c4f1e779c4287b31ec toolchain-funcs e867df3870e8ff04a5b94f925be8b06a +_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib 97566c1a256d07b00848aa767e38a352 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa _md5_=9779366f51f2fea08274072a9a019159 diff --git a/metadata/md5-cache/sci-biology/mira-4.0.2-r1 b/metadata/md5-cache/sci-biology/mira-4.0.2-r1 index b11c8ce9d65e..78e5a0444f74 100644 --- a/metadata/md5-cache/sci-biology/mira-4.0.2-r1 +++ b/metadata/md5-cache/sci-biology/mira-4.0.2-r1 @@ -9,5 +9,5 @@ LICENSE=GPL-2 RDEPEND=dev-libs/boost:=[threads(+)] dev-util/google-perftools SLOT=0 SRC_URI=https://sourceforge.net/projects/mira-assembler/files/MIRA/stable/mira-4.0.2.tar.bz2 mirror://sourceforge/mira-assembler/mira_3rdparty_06-07-2012.tar.bz2 -_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 9a53f21c753d823ba20a22f857c25cb4 gnuconfig 9f91b4b0c84e734a87492d4293f03de5 l10n 3c7381c56a184f0dd5ba3fb824808f30 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib f8d35c2432bb32c4f1e779c4287b31ec preserve-libs dbc9f8d2d49c66467bc327fddd8317bd toolchain-funcs e867df3870e8ff04a5b94f925be8b06a vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 9a53f21c753d823ba20a22f857c25cb4 gnuconfig 262062cef0ba4f22b397193da514a350 l10n 3c7381c56a184f0dd5ba3fb824808f30 libtool 241a8f577b9781a42a7421e53448a44e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 97566c1a256d07b00848aa767e38a352 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=7d807f37f8dfc41b66f293797784f472 diff --git a/metadata/md5-cache/sci-biology/mosaik-2.2.30 b/metadata/md5-cache/sci-biology/mosaik-2.2.30 index f604f7f87bbd..18ca6ec49df9 100644 --- a/metadata/md5-cache/sci-biology/mosaik-2.2.30 +++ b/metadata/md5-cache/sci-biology/mosaik-2.2.30 @@ -6,5 +6,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=https://github.com/wanpinglee/MOSAIK/archive/5c25216d3522d6a33e53875cd76a6d65001e4e67.tar.gz -> mosaik-2.2.30.tar.gz -_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic bc2e7662a4a9a8643be851982a837ddc l10n 3c7381c56a184f0dd5ba3fb824808f30 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib f8d35c2432bb32c4f1e779c4287b31ec preserve-libs dbc9f8d2d49c66467bc327fddd8317bd toolchain-funcs e867df3870e8ff04a5b94f925be8b06a vcs-clean b690a7e9b6c497cf59326a7545df4283 vcs-snapshot b1abf460a493fc59ebb25de0df3f09dd wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 l10n 3c7381c56a184f0dd5ba3fb824808f30 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 97566c1a256d07b00848aa767e38a352 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa vcs-clean b690a7e9b6c497cf59326a7545df4283 vcs-snapshot b1abf460a493fc59ebb25de0df3f09dd wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=630686b35f8a549c580c5fd0e2cb02fc diff --git a/metadata/md5-cache/sci-biology/mothur-1.27.0-r1 b/metadata/md5-cache/sci-biology/mothur-1.27.0-r1 index 215d6e84e199..557274a271ee 100644 --- a/metadata/md5-cache/sci-biology/mothur-1.27.0-r1 +++ b/metadata/md5-cache/sci-biology/mothur-1.27.0-r1 @@ -10,5 +10,5 @@ LICENSE=GPL-3 RDEPEND=sci-biology/uchime mpi? ( virtual/mpi ) virtual/fortran SLOT=0 SRC_URI=https://www.mothur.org/w/images/c/cb/Mothur.1.27.0.zip -> mothur-1.27.0.zip -_eclasses_=edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic bc2e7662a4a9a8643be851982a837ddc fortran-2 3cec34b0def864e87677d8b2b1c370b8 l10n 3c7381c56a184f0dd5ba3fb824808f30 multilib f8d35c2432bb32c4f1e779c4287b31ec toolchain-funcs e867df3870e8ff04a5b94f925be8b06a wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 fortran-2 3cec34b0def864e87677d8b2b1c370b8 l10n 3c7381c56a184f0dd5ba3fb824808f30 multilib 97566c1a256d07b00848aa767e38a352 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=2a931ea6d0536a0cb3441d235f5d2d6b diff --git a/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r2 b/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r2 index cddf68d57578..93f28bb858af 100644 --- a/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r2 +++ b/metadata/md5-cache/sci-biology/mrbayes-3.1.2-r2 @@ -9,5 +9,5 @@ LICENSE=GPL-2 RDEPEND=sys-libs/ncurses:0= mpi? ( virtual/mpi ) readline? ( sys-libs/readline:0= ) SLOT=0 SRC_URI=mirror://sourceforge/mrbayes/mrbayes-3.1.2.tar.gz -_eclasses_=epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 multilib f8d35c2432bb32c4f1e779c4287b31ec toolchain-funcs e867df3870e8ff04a5b94f925be8b06a +_eclasses_=epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 multilib 97566c1a256d07b00848aa767e38a352 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa _md5_=c97a54ea522e76af98a9b4e7e29e79cc diff --git a/metadata/md5-cache/sci-biology/mummer-3.23 b/metadata/md5-cache/sci-biology/mummer-3.23 index 4369a14034b8..b8c3476b1fa5 100644 --- a/metadata/md5-cache/sci-biology/mummer-3.23 +++ b/metadata/md5-cache/sci-biology/mummer-3.23 @@ -8,5 +8,5 @@ LICENSE=Artistic RDEPEND=app-shells/tcsh dev-lang/perl SLOT=0 SRC_URI=mirror://sourceforge/mummer/MUMmer3.23.tar.gz -_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic bc2e7662a4a9a8643be851982a837ddc l10n 3c7381c56a184f0dd5ba3fb824808f30 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib f8d35c2432bb32c4f1e779c4287b31ec preserve-libs dbc9f8d2d49c66467bc327fddd8317bd toolchain-funcs e867df3870e8ff04a5b94f925be8b06a vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 l10n 3c7381c56a184f0dd5ba3fb824808f30 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 97566c1a256d07b00848aa767e38a352 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=c256f298b416306c1be7005e7877f7b9 diff --git a/metadata/md5-cache/sci-biology/muscle-3.8.31 b/metadata/md5-cache/sci-biology/muscle-3.8.31 index 157826bd7c1d..bd6b5ae90219 100644 --- a/metadata/md5-cache/sci-biology/muscle-3.8.31 +++ b/metadata/md5-cache/sci-biology/muscle-3.8.31 @@ -7,5 +7,5 @@ LICENSE=public-domain RDEPEND=!sci-libs/libmuscle SLOT=0 SRC_URI=http://www.drive5.com/muscle/downloads3.8.31/muscle3.8.31_src.tar.gz -_eclasses_=multilib f8d35c2432bb32c4f1e779c4287b31ec toolchain-funcs e867df3870e8ff04a5b94f925be8b06a +_eclasses_=multilib 97566c1a256d07b00848aa767e38a352 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa _md5_=53bf57f6526fd17fc747a39406e13cef diff --git a/metadata/md5-cache/sci-biology/ncbi-tools-2.2.26-r3 b/metadata/md5-cache/sci-biology/ncbi-tools-2.2.26-r3 index 8b57d5a7e143..8020562569bb 100644 --- a/metadata/md5-cache/sci-biology/ncbi-tools-2.2.26-r3 +++ b/metadata/md5-cache/sci-biology/ncbi-tools-2.2.26-r3 @@ -9,5 +9,5 @@ LICENSE=public-domain RDEPEND=app-shells/tcsh dev-lang/perl media-libs/libpng:0= virtual/glu virtual/opengl X? ( media-libs/fontconfig x11-libs/motif:0= x11-libs/libICE x11-libs/libX11 x11-libs/libXft x11-libs/libXmu x11-libs/libXt ) SLOT=0 SRC_URI=ftp://ftp.ncbi.nlm.nih.gov/blast/executables/release/2.2.26/ncbi.tar.gz -> ncbi-tools-2.2.26.tar.gz -_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic bc2e7662a4a9a8643be851982a837ddc l10n 3c7381c56a184f0dd5ba3fb824808f30 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib f8d35c2432bb32c4f1e779c4287b31ec prefix 245bf72183394aa1b43afa1dbc97ab2c preserve-libs dbc9f8d2d49c66467bc327fddd8317bd toolchain-funcs e867df3870e8ff04a5b94f925be8b06a vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 l10n 3c7381c56a184f0dd5ba3fb824808f30 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 97566c1a256d07b00848aa767e38a352 prefix 245bf72183394aa1b43afa1dbc97ab2c preserve-libs dbc9f8d2d49c66467bc327fddd8317bd toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=4a060d3447bfe5e557c4831b3fc8fad9 diff --git a/metadata/md5-cache/sci-biology/newick-utils-1.6-r1 b/metadata/md5-cache/sci-biology/newick-utils-1.6-r1 index eef94283a066..19d55d721892 100644 --- a/metadata/md5-cache/sci-biology/newick-utils-1.6-r1 +++ b/metadata/md5-cache/sci-biology/newick-utils-1.6-r1 @@ -10,5 +10,5 @@ LICENSE=BSD RDEPEND=xml? ( dev-libs/libxml2 ) !dev-games/libnw SLOT=0 SRC_URI=http://cegg.unige.ch/pub/newick-utils-1.6.tar.gz -_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 gnuconfig 9f91b4b0c84e734a87492d4293f03de5 libtool f143db5a74ccd9ca28c1234deffede96 multilib f8d35c2432bb32c4f1e779c4287b31ec toolchain-funcs e867df3870e8ff04a5b94f925be8b06a +_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib 97566c1a256d07b00848aa767e38a352 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa _md5_=fac40fe86b457a75883a5eb465ce18d8 diff --git a/metadata/md5-cache/sci-biology/njplot-2.3-r2 b/metadata/md5-cache/sci-biology/njplot-2.3-r2 index ab86d246d6b9..a07e6c658cd0 100644 --- a/metadata/md5-cache/sci-biology/njplot-2.3-r2 +++ b/metadata/md5-cache/sci-biology/njplot-2.3-r2 @@ -8,5 +8,5 @@ LICENSE=public-domain RDEPEND=sci-biology/ncbi-tools[X,static-libs] x11-libs/libXmu SLOT=0 SRC_URI=ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/njplot/archive/njplot-2.3.tar.gz -_eclasses_=multilib f8d35c2432bb32c4f1e779c4287b31ec toolchain-funcs e867df3870e8ff04a5b94f925be8b06a +_eclasses_=multilib 97566c1a256d07b00848aa767e38a352 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa _md5_=c70b49c7f5e1a92f5169df372f9638c6 diff --git a/metadata/md5-cache/sci-biology/pals-1.0-r1 b/metadata/md5-cache/sci-biology/pals-1.0-r1 index 6ac1ac5e4f8b..8e8fd2e48b24 100644 --- a/metadata/md5-cache/sci-biology/pals-1.0-r1 +++ b/metadata/md5-cache/sci-biology/pals-1.0-r1 @@ -6,5 +6,5 @@ KEYWORDS=amd64 x86 LICENSE=public-domain SLOT=0 SRC_URI=http://www.drive5.com/pals/pals_source.tar.gz -> pals-1.0.tar.gz -_eclasses_=multilib f8d35c2432bb32c4f1e779c4287b31ec toolchain-funcs e867df3870e8ff04a5b94f925be8b06a +_eclasses_=multilib 97566c1a256d07b00848aa767e38a352 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa _md5_=b0df20d47905df6a290c5fe2f79fd48b diff --git a/metadata/md5-cache/sci-biology/paml-4.9j b/metadata/md5-cache/sci-biology/paml-4.9j index 141f709a9053..d2ac14902ea3 100644 --- a/metadata/md5-cache/sci-biology/paml-4.9j +++ b/metadata/md5-cache/sci-biology/paml-4.9j @@ -6,5 +6,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=free-noncomm SLOT=0 SRC_URI=http://abacus.gene.ucl.ac.uk/software/paml4.9j.tgz -_eclasses_=multilib f8d35c2432bb32c4f1e779c4287b31ec toolchain-funcs e867df3870e8ff04a5b94f925be8b06a +_eclasses_=multilib 97566c1a256d07b00848aa767e38a352 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa _md5_=236ce838eff8e04f8059e18110b3ff38 diff --git a/metadata/md5-cache/sci-biology/phrap-1.080812-r2 b/metadata/md5-cache/sci-biology/phrap-1.080812-r2 index 5763887a3c73..80f02581768b 100644 --- a/metadata/md5-cache/sci-biology/phrap-1.080812-r2 +++ b/metadata/md5-cache/sci-biology/phrap-1.080812-r2 @@ -8,5 +8,5 @@ RDEPEND=dev-lang/perl dev-perl/Tk RESTRICT=fetch SLOT=0 SRC_URI=phrap-1.080812-distrib.tar.gz -_eclasses_=multilib f8d35c2432bb32c4f1e779c4287b31ec toolchain-funcs e867df3870e8ff04a5b94f925be8b06a +_eclasses_=multilib 97566c1a256d07b00848aa767e38a352 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa _md5_=8f5aa73e6a49ffbd5804d4ddea05b2b8 diff --git a/metadata/md5-cache/sci-biology/phred-071220-r1 b/metadata/md5-cache/sci-biology/phred-071220-r1 index 4d6676c84466..bf9dcca499d1 100644 --- a/metadata/md5-cache/sci-biology/phred-071220-r1 +++ b/metadata/md5-cache/sci-biology/phred-071220-r1 @@ -7,5 +7,5 @@ LICENSE=phrap RESTRICT=fetch SLOT=0 SRC_URI=phred-dist-071220.b-acd.tar.gz -_eclasses_=multilib f8d35c2432bb32c4f1e779c4287b31ec toolchain-funcs e867df3870e8ff04a5b94f925be8b06a +_eclasses_=multilib 97566c1a256d07b00848aa767e38a352 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa _md5_=6cb07f602eee34da61fd893818f30936 diff --git a/metadata/md5-cache/sci-biology/phylip-3.698 b/metadata/md5-cache/sci-biology/phylip-3.698 index b8853eebb27c..cf88d9e53ad5 100644 --- a/metadata/md5-cache/sci-biology/phylip-3.698 +++ b/metadata/md5-cache/sci-biology/phylip-3.698 @@ -9,5 +9,5 @@ LICENSE=BSD-2 RDEPEND=x11-libs/libXaw !dev-lang/elixir SLOT=0 SRC_URI=http://evolution.gs.washington.edu/phylip/download/phylip-3.698.zip -_eclasses_=edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic bc2e7662a4a9a8643be851982a837ddc l10n 3c7381c56a184f0dd5ba3fb824808f30 multilib f8d35c2432bb32c4f1e779c4287b31ec toolchain-funcs e867df3870e8ff04a5b94f925be8b06a wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 l10n 3c7381c56a184f0dd5ba3fb824808f30 multilib 97566c1a256d07b00848aa767e38a352 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=b3a777c086ea4a6cd489efcb5bde7b66 diff --git a/metadata/md5-cache/sci-biology/phyml-2.4.5-r3 b/metadata/md5-cache/sci-biology/phyml-2.4.5-r3 index 0d9dc97457e5..4e960b7790b3 100644 --- a/metadata/md5-cache/sci-biology/phyml-2.4.5-r3 +++ b/metadata/md5-cache/sci-biology/phyml-2.4.5-r3 @@ -6,5 +6,5 @@ KEYWORDS=amd64 ppc x86 LICENSE=GPL-2 SLOT=0 SRC_URI=http://www.lirmm.fr/~guindon/phyml_v2.4.5.tar.gz -_eclasses_=multilib f8d35c2432bb32c4f1e779c4287b31ec toolchain-funcs e867df3870e8ff04a5b94f925be8b06a +_eclasses_=multilib 97566c1a256d07b00848aa767e38a352 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa _md5_=fcca6fb4f9e88f5eb6a63a3ee0c79df7 diff --git a/metadata/md5-cache/sci-biology/picard-1.103 b/metadata/md5-cache/sci-biology/picard-1.103 index 78932b31d36c..8b8632f80726 100644 --- a/metadata/md5-cache/sci-biology/picard-1.103 +++ b/metadata/md5-cache/sci-biology/picard-1.103 @@ -10,5 +10,5 @@ RDEPEND=>=virtual/jre-1.6 dev-java/snappy:1.0 dev-java/cofoja:0 dev-java/commons RESTRICT=!test? ( test ) SLOT=0 SRC_URI=https://dev.gentoo.org/~ercpe/distfiles/sci-biology/picard/picard-1.103.tar.bz2 -_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 eapi7-ver f9ec87e93172b25ce65a85303dc06964 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 9a53f21c753d823ba20a22f857c25cb4 java-ant-2 b894c6ee57778b79eaa20e56ece53358 java-pkg-2 37e38ed0662a78bfde9cb4f6d11ed6dc java-utils-2 b5e6ac3113ad5ad2b604a72029a9969f l10n 3c7381c56a184f0dd5ba3fb824808f30 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib f8d35c2432bb32c4f1e779c4287b31ec preserve-libs dbc9f8d2d49c66467bc327fddd8317bd toolchain-funcs e867df3870e8ff04a5b94f925be8b06a vcs-clean b690a7e9b6c497cf59326a7545df4283 versionator d3fb3ba33acc3bbbdc4d7970227c100d wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 eapi7-ver f9ec87e93172b25ce65a85303dc06964 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 9a53f21c753d823ba20a22f857c25cb4 java-ant-2 b894c6ee57778b79eaa20e56ece53358 java-pkg-2 37e38ed0662a78bfde9cb4f6d11ed6dc java-utils-2 b5e6ac3113ad5ad2b604a72029a9969f l10n 3c7381c56a184f0dd5ba3fb824808f30 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 97566c1a256d07b00848aa767e38a352 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa vcs-clean b690a7e9b6c497cf59326a7545df4283 versionator d3fb3ba33acc3bbbdc4d7970227c100d wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=09627e6bb74ee9997324bde01a56bcbd diff --git a/metadata/md5-cache/sci-biology/piler-1.0-r1 b/metadata/md5-cache/sci-biology/piler-1.0-r1 index 0409de618899..c58e79054df9 100644 --- a/metadata/md5-cache/sci-biology/piler-1.0-r1 +++ b/metadata/md5-cache/sci-biology/piler-1.0-r1 @@ -7,5 +7,5 @@ LICENSE=public-domain RDEPEND=|| ( sci-biology/muscle sci-libs/libmuscle ) sci-biology/pals SLOT=0 SRC_URI=http://www.drive5.com/piler/piler_source.tar.gz -> piler-1.0.tar.gz -_eclasses_=multilib f8d35c2432bb32c4f1e779c4287b31ec toolchain-funcs e867df3870e8ff04a5b94f925be8b06a +_eclasses_=multilib 97566c1a256d07b00848aa767e38a352 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa _md5_=7b5a6d618aac08240cf165a04509c319 diff --git a/metadata/md5-cache/sci-biology/pilercr-1.0-r1 b/metadata/md5-cache/sci-biology/pilercr-1.0-r1 index 8b97ff7275d9..80433e46131a 100644 --- a/metadata/md5-cache/sci-biology/pilercr-1.0-r1 +++ b/metadata/md5-cache/sci-biology/pilercr-1.0-r1 @@ -6,5 +6,5 @@ KEYWORDS=amd64 x86 LICENSE=public-domain SLOT=0 SRC_URI=http://www.drive5.com/pilercr/pilercr1.06.tar.gz -> pilercr-1.0.tar.gz -_eclasses_=multilib f8d35c2432bb32c4f1e779c4287b31ec toolchain-funcs e867df3870e8ff04a5b94f925be8b06a +_eclasses_=multilib 97566c1a256d07b00848aa767e38a352 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa _md5_=d9f7901d3776c424cfb93782cc6ddafa diff --git a/metadata/md5-cache/sci-biology/plink-1.90_pre140514 b/metadata/md5-cache/sci-biology/plink-1.90_pre140514 index 3bf69d60aec2..4b0c15f37118 100644 --- a/metadata/md5-cache/sci-biology/plink-1.90_pre140514 +++ b/metadata/md5-cache/sci-biology/plink-1.90_pre140514 @@ -8,5 +8,5 @@ LICENSE=GPL-2 RDEPEND=sys-libs/zlib virtual/cblas virtual/lapack SLOT=0 SRC_URI=http://pngu.mgh.harvard.edu/~purcell/static/bin/plink140514/plink_src.zip -> plink-1.90_pre140514.zip -_eclasses_=multilib f8d35c2432bb32c4f1e779c4287b31ec toolchain-funcs e867df3870e8ff04a5b94f925be8b06a +_eclasses_=multilib 97566c1a256d07b00848aa767e38a352 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa _md5_=e1f50da3f99cd26238e4ef37a7de379a diff --git a/metadata/md5-cache/sci-biology/poa-2-r1 b/metadata/md5-cache/sci-biology/poa-2-r1 index aa785d7b0a75..18cd51900475 100644 --- a/metadata/md5-cache/sci-biology/poa-2-r1 +++ b/metadata/md5-cache/sci-biology/poa-2-r1 @@ -6,5 +6,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=mirror://sourceforge/poamsa/poaV2.tar.gz -_eclasses_=multilib f8d35c2432bb32c4f1e779c4287b31ec toolchain-funcs e867df3870e8ff04a5b94f925be8b06a +_eclasses_=multilib 97566c1a256d07b00848aa767e38a352 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa _md5_=d7bb9c94a05320cd21ff72a8beb56406 diff --git a/metadata/md5-cache/sci-biology/prank-140603 b/metadata/md5-cache/sci-biology/prank-140603 index e1b437ea4a46..c6f84796ef72 100644 --- a/metadata/md5-cache/sci-biology/prank-140603 +++ b/metadata/md5-cache/sci-biology/prank-140603 @@ -6,5 +6,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-3 SLOT=0 SRC_URI=http://wasabiapp.org/download/prank/prank.source.140603.tgz -_eclasses_=multilib f8d35c2432bb32c4f1e779c4287b31ec toolchain-funcs e867df3870e8ff04a5b94f925be8b06a +_eclasses_=multilib 97566c1a256d07b00848aa767e38a352 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa _md5_=17023476000980284365a9c0ed04a6f0 diff --git a/metadata/md5-cache/sci-biology/primer3-2.3.7 b/metadata/md5-cache/sci-biology/primer3-2.3.7 index bed0acf171b3..e4aa711ed68b 100644 --- a/metadata/md5-cache/sci-biology/primer3-2.3.7 +++ b/metadata/md5-cache/sci-biology/primer3-2.3.7 @@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~ppc ~ppc64 ~sparc ~x86 ~amd64-linux ~x86-linux ~ppc-macos ~spar LICENSE=GPL-2 SLOT=0 SRC_URI=mirror://sourceforge/project/primer3/primer3/2.3.7/primer3-2.3.7.tar.gz -_eclasses_=multilib f8d35c2432bb32c4f1e779c4287b31ec toolchain-funcs e867df3870e8ff04a5b94f925be8b06a +_eclasses_=multilib 97566c1a256d07b00848aa767e38a352 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa _md5_=e79ee4774138e651c83467c2b2cb2926 diff --git a/metadata/md5-cache/sci-biology/probcons-1.12-r1 b/metadata/md5-cache/sci-biology/probcons-1.12-r1 index b1bfbe0e78bf..fb5c6a78a4ac 100644 --- a/metadata/md5-cache/sci-biology/probcons-1.12-r1 +++ b/metadata/md5-cache/sci-biology/probcons-1.12-r1 @@ -7,5 +7,5 @@ LICENSE=public-domain RDEPEND=!sci-geosciences/gmt sci-visualization/gnuplot SLOT=0 SRC_URI=http://probcons.stanford.edu/probcons_v1_12.tar.gz -_eclasses_=multilib f8d35c2432bb32c4f1e779c4287b31ec toolchain-funcs e867df3870e8ff04a5b94f925be8b06a +_eclasses_=multilib 97566c1a256d07b00848aa767e38a352 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa _md5_=0f60285a7f7c2929aed4404425c3fc40 diff --git a/metadata/md5-cache/sci-biology/prodigal-2.6.3 b/metadata/md5-cache/sci-biology/prodigal-2.6.3 index 309b96bc56be..c89eec8090e7 100644 --- a/metadata/md5-cache/sci-biology/prodigal-2.6.3 +++ b/metadata/md5-cache/sci-biology/prodigal-2.6.3 @@ -6,5 +6,5 @@ KEYWORDS=~amd64 LICENSE=GPL-3 SLOT=0 SRC_URI=https://github.com/hyattpd/Prodigal/archive/v2.6.3.tar.gz -> prodigal-2.6.3.tar.gz -_eclasses_=multilib f8d35c2432bb32c4f1e779c4287b31ec toolchain-funcs e867df3870e8ff04a5b94f925be8b06a +_eclasses_=multilib 97566c1a256d07b00848aa767e38a352 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa _md5_=9cea3bcc55e864076d7e4b542f657f96 diff --git a/metadata/md5-cache/sci-biology/psipred-3.5 b/metadata/md5-cache/sci-biology/psipred-3.5 index e36da696ce8d..18bda5173fe3 100644 --- a/metadata/md5-cache/sci-biology/psipred-3.5 +++ b/metadata/md5-cache/sci-biology/psipred-3.5 @@ -9,5 +9,5 @@ RDEPEND=app-shells/tcsh sci-biology/ncbi-tools sci-biology/update-blastdb RESTRICT=!test? ( test ) SLOT=0 SRC_URI=http://bioinf.cs.ucl.ac.uk/downloads/psipred/psipred3.5.tar.gz test? ( http://bioinfadmin.cs.ucl.ac.uk/downloads/psipred/old/data/tdbdata.tar.gz ) -_eclasses_=epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 multilib f8d35c2432bb32c4f1e779c4287b31ec prefix 245bf72183394aa1b43afa1dbc97ab2c toolchain-funcs e867df3870e8ff04a5b94f925be8b06a versionator d3fb3ba33acc3bbbdc4d7970227c100d +_eclasses_=epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 multilib 97566c1a256d07b00848aa767e38a352 prefix 245bf72183394aa1b43afa1dbc97ab2c toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa versionator d3fb3ba33acc3bbbdc4d7970227c100d _md5_=2d88f4808280c081fe9c75555b6d5c9e diff --git a/metadata/md5-cache/sci-biology/pysam-0.16.0.1 b/metadata/md5-cache/sci-biology/pysam-0.16.0.1 index cd20da19d162..e178a77864c7 100644 --- a/metadata/md5-cache/sci-biology/pysam-0.16.0.1 +++ b/metadata/md5-cache/sci-biology/pysam-0.16.0.1 @@ -1,16 +1,16 @@ -BDEPEND=test? ( =sci-biology/bcftools-1.10* =sci-biology/samtools-1.10* ) test? ( =sci-libs/htslib-1.10*:= >=dev-python/pytest-4.5.0[python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_8(-),-python_single_target_python3_9(-)] ) python_targets_python3_8? ( dev-lang/python:3.8 ) python_targets_python3_9? ( dev-lang/python:3.9 ) >=dev-lang/python-exec-2:=[python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_8(-),-python_single_target_python3_9(-)] >=dev-python/setuptools-42.0.2[python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_8(-),-python_single_target_python3_9(-)] +BDEPEND=test? ( =sci-biology/bcftools-1.10* =sci-biology/samtools-1.10* ) test? ( =sci-libs/htslib-1.10*:= >=dev-python/pytest-4.5.0[python_targets_python3_8(-)?,python_targets_python3_9(-)?] ) python_targets_python3_8? ( dev-lang/python:3.8 ) python_targets_python3_9? ( dev-lang/python:3.9 ) >=dev-lang/python-exec-2:=[python_targets_python3_8(-)?,python_targets_python3_9(-)?] >=dev-python/setuptools-42.0.2[python_targets_python3_8(-)?,python_targets_python3_9(-)?] DEFINED_PHASES=compile configure install prepare test -DEPEND==sci-libs/htslib-1.10*:= dev-python/cython[python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_8(-),-python_single_target_python3_9(-)] dev-python/setuptools[python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_8(-),-python_single_target_python3_9(-)] +DEPEND==sci-libs/htslib-1.10*:= dev-python/cython[python_targets_python3_8(-)?,python_targets_python3_9(-)?] dev-python/setuptools[python_targets_python3_8(-)?,python_targets_python3_9(-)?] DESCRIPTION=Python interface for the SAM/BAM sequence alignment and mapping format EAPI=7 HOMEPAGE=https://github.com/pysam-developers/pysam https://pypi.org/project/pysam/ IUSE=test python_targets_python3_8 python_targets_python3_9 KEYWORDS=~amd64 ~x86 LICENSE=MIT -RDEPEND==sci-libs/htslib-1.10*:= python_targets_python3_8? ( dev-lang/python:3.8 ) python_targets_python3_9? ( dev-lang/python:3.9 ) >=dev-lang/python-exec-2:=[python_targets_python3_8(-)?,python_targets_python3_9(-)?,-python_single_target_python3_8(-),-python_single_target_python3_9(-)] +RDEPEND==sci-libs/htslib-1.10*:= python_targets_python3_8? ( dev-lang/python:3.8 ) python_targets_python3_9? ( dev-lang/python:3.9 ) >=dev-lang/python-exec-2:=[python_targets_python3_8(-)?,python_targets_python3_9(-)?] REQUIRED_USE=|| ( python_targets_python3_8 python_targets_python3_9 ) RESTRICT=!test? ( test ) SLOT=0 SRC_URI=https://github.com/pysam-developers/pysam/archive/v0.16.0.1.tar.gz -> pysam-0.16.0.1.tar.gz -_eclasses_=distutils-r1 c21cf58c1e3c67e0ea53c96a7b37eddd multibuild 6b3d5ee849dafe6cdfd7b859c211fb01 multilib f8d35c2432bb32c4f1e779c4287b31ec multiprocessing 61c959fc55c15c00bbb1079d6a71370b python-r1 26e4ad0a4190b14f70973dc253e86535 python-utils-r1 6e84b7d3d8d0bb1ee12774f4a66909e2 toolchain-funcs e867df3870e8ff04a5b94f925be8b06a +_eclasses_=distutils-r1 881e51510dd0c384fb912f54c0865d2e eapi8-dosym cd7d420bb5be5ee079f27239ce76b8f5 multibuild 05a584848db4901c97fcd94ae7cc3a97 multilib 97566c1a256d07b00848aa767e38a352 multiprocessing 61c959fc55c15c00bbb1079d6a71370b python-r1 e20b80360497e6215aed0dd4ca7d6bad python-utils-r1 969dff6876159a10dfdad9e01d265d1c toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa _md5_=24cbd77fb49bf7dfa36311bf5973256d diff --git a/metadata/md5-cache/sci-biology/qrna-2.0.3c-r3 b/metadata/md5-cache/sci-biology/qrna-2.0.3c-r3 index ddfb52ad3532..73c4abe9b1d0 100644 --- a/metadata/md5-cache/sci-biology/qrna-2.0.3c-r3 +++ b/metadata/md5-cache/sci-biology/qrna-2.0.3c-r3 @@ -8,5 +8,5 @@ LICENSE=GPL-2 RDEPEND=dev-lang/perl sci-biology/hmmer:2 SLOT=0 SRC_URI=mirror://gentoo/qrna-2.0.3c.tar.bz2 -_eclasses_=multilib f8d35c2432bb32c4f1e779c4287b31ec toolchain-funcs e867df3870e8ff04a5b94f925be8b06a +_eclasses_=multilib 97566c1a256d07b00848aa767e38a352 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa _md5_=fdc52d5355060d858ec78d793dc26d81 diff --git a/metadata/md5-cache/sci-biology/raxml-7.2.6 b/metadata/md5-cache/sci-biology/raxml-7.2.6 index a425e38a3546..a484caf4717a 100644 --- a/metadata/md5-cache/sci-biology/raxml-7.2.6 +++ b/metadata/md5-cache/sci-biology/raxml-7.2.6 @@ -8,5 +8,5 @@ LICENSE=GPL-2 REQUIRED_USE=cpu_flags_x86_sse3 SLOT=0 SRC_URI=http://wwwkramer.in.tum.de/exelixis/software/RAxML-7.2.6.tar.bz2 -_eclasses_=edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic bc2e7662a4a9a8643be851982a837ddc l10n 3c7381c56a184f0dd5ba3fb824808f30 multilib f8d35c2432bb32c4f1e779c4287b31ec toolchain-funcs e867df3870e8ff04a5b94f925be8b06a wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 l10n 3c7381c56a184f0dd5ba3fb824808f30 multilib 97566c1a256d07b00848aa767e38a352 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=14b77d8b019468c10a65f1358be0d8ae diff --git a/metadata/md5-cache/sci-biology/recon-1.08 b/metadata/md5-cache/sci-biology/recon-1.08 index 1953df6b1454..81f5947f5753 100644 --- a/metadata/md5-cache/sci-biology/recon-1.08 +++ b/metadata/md5-cache/sci-biology/recon-1.08 @@ -8,5 +8,5 @@ LICENSE=GPL-2 RDEPEND=dev-lang/perl SLOT=0 SRC_URI=http://www.repeatmasker.org/RECON-1.08.tar.gz -_eclasses_=multilib f8d35c2432bb32c4f1e779c4287b31ec toolchain-funcs e867df3870e8ff04a5b94f925be8b06a +_eclasses_=multilib 97566c1a256d07b00848aa767e38a352 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa _md5_=2ddd537d912c7c88b6f0b0d203a51613 diff --git a/metadata/md5-cache/sci-biology/rmblast-1.2-r1 b/metadata/md5-cache/sci-biology/rmblast-1.2-r1 index 26cbd2be8f3e..b8f56266422c 100644 --- a/metadata/md5-cache/sci-biology/rmblast-1.2-r1 +++ b/metadata/md5-cache/sci-biology/rmblast-1.2-r1 @@ -8,5 +8,5 @@ LICENSE=OSL-2.1 RDEPEND=dev-libs/boost SLOT=0 SRC_URI=http://www.repeatmasker.org/rmblast-1.2-ncbi-blast-2.2.23+-src.tar.gz https://dev.gentoo.org/~mgorny/dist/rmblast-1.2-gcc47.patch.bz2 -_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic bc2e7662a4a9a8643be851982a837ddc l10n 3c7381c56a184f0dd5ba3fb824808f30 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib f8d35c2432bb32c4f1e779c4287b31ec preserve-libs dbc9f8d2d49c66467bc327fddd8317bd toolchain-funcs e867df3870e8ff04a5b94f925be8b06a vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 l10n 3c7381c56a184f0dd5ba3fb824808f30 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 97566c1a256d07b00848aa767e38a352 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=2f7831c50cdca352d9a7b340a8bee159 diff --git a/metadata/md5-cache/sci-biology/rnaview-20040713-r4 b/metadata/md5-cache/sci-biology/rnaview-20040713-r4 index d4fdf97d46e6..a2a643c165be 100644 --- a/metadata/md5-cache/sci-biology/rnaview-20040713-r4 +++ b/metadata/md5-cache/sci-biology/rnaview-20040713-r4 @@ -6,5 +6,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=public-domain SLOT=0 SRC_URI=mirror://gentoo/rnaview-20040713.tar.bz2 -_eclasses_=multilib f8d35c2432bb32c4f1e779c4287b31ec toolchain-funcs e867df3870e8ff04a5b94f925be8b06a +_eclasses_=multilib 97566c1a256d07b00848aa767e38a352 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa _md5_=788c156d45287bef4f6aa876055bde4c diff --git a/metadata/md5-cache/sci-biology/samtools-0.1.20-r4 b/metadata/md5-cache/sci-biology/samtools-0.1.20-r4 index fbae5970e843..922646f73596 100644 --- a/metadata/md5-cache/sci-biology/samtools-0.1.20-r4 +++ b/metadata/md5-cache/sci-biology/samtools-0.1.20-r4 @@ -9,5 +9,5 @@ LICENSE=MIT RDEPEND=sys-libs/ncurses:0= dev-lang/perl SLOT=0.1-legacy SRC_URI=https://github.com/samtools/samtools/archive/0.1.20.tar.gz -> samtools-0.1.20.tar.gz -_eclasses_=multilib f8d35c2432bb32c4f1e779c4287b31ec toolchain-funcs e867df3870e8ff04a5b94f925be8b06a +_eclasses_=multilib 97566c1a256d07b00848aa767e38a352 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa _md5_=89941c8b8d527ccc386063a3f533ef77 diff --git a/metadata/md5-cache/sci-biology/samtools-1.10 b/metadata/md5-cache/sci-biology/samtools-1.10 index 2c5e3521880a..87a950f2809d 100644 --- a/metadata/md5-cache/sci-biology/samtools-1.10 +++ b/metadata/md5-cache/sci-biology/samtools-1.10 @@ -9,5 +9,5 @@ LICENSE=MIT RDEPEND=dev-lang/perl =sci-libs/htslib-1.10* sys-libs/ncurses:0=[unicode] sys-libs/zlib:= SLOT=0 SRC_URI=mirror://sourceforge/samtools/samtools-1.10.tar.bz2 -_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 gnuconfig 9f91b4b0c84e734a87492d4293f03de5 libtool f143db5a74ccd9ca28c1234deffede96 multilib f8d35c2432bb32c4f1e779c4287b31ec toolchain-funcs e867df3870e8ff04a5b94f925be8b06a +_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 gnuconfig 262062cef0ba4f22b397193da514a350 libtool 241a8f577b9781a42a7421e53448a44e multilib 97566c1a256d07b00848aa767e38a352 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa _md5_=67d56fa48d3a475403ad1a726690e370 diff --git a/metadata/md5-cache/sci-biology/seaview-4.6-r1 b/metadata/md5-cache/sci-biology/seaview-4.6-r1 index 5aa124a65e2f..752e87e9c6a4 100644 --- a/metadata/md5-cache/sci-biology/seaview-4.6-r1 +++ b/metadata/md5-cache/sci-biology/seaview-4.6-r1 @@ -10,5 +10,5 @@ LICENSE=public-domain RDEPEND=sci-biology/clustalw:2 sci-biology/phyml || ( sci-libs/libmuscle sci-biology/muscle ) sys-libs/zlib x11-libs/fltk:1[xft?] x11-libs/libX11 xft? ( x11-libs/libXft ) SLOT=0 SRC_URI=ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/seaview/archive/seaview_4.6.tar.gz -_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 multilib f8d35c2432bb32c4f1e779c4287b31ec toolchain-funcs e867df3870e8ff04a5b94f925be8b06a +_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 multilib 97566c1a256d07b00848aa767e38a352 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa _md5_=a742711d8523a4e49524662c12d647c2 diff --git a/metadata/md5-cache/sci-biology/seqan-2.4.0-r1 b/metadata/md5-cache/sci-biology/seqan-2.4.0-r1 index d90ca959b001..69eedbd1f5b6 100644 --- a/metadata/md5-cache/sci-biology/seqan-2.4.0-r1 +++ b/metadata/md5-cache/sci-biology/seqan-2.4.0-r1 @@ -11,5 +11,5 @@ RDEPEND=app-arch/bzip2:= sys-libs/zlib !!sci-biology/seqan:2.0 !!sci-biology/seq REQUIRED_USE=cpu_flags_x86_sse4_1 SLOT=0 SRC_URI=https://github.com/seqan/seqan/archive/seqan-v2.4.0.tar.gz -_eclasses_=cmake 518e4c9a6a38dfd7afc54b6a7c5de3da edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic bc2e7662a4a9a8643be851982a837ddc l10n 3c7381c56a184f0dd5ba3fb824808f30 multibuild 6b3d5ee849dafe6cdfd7b859c211fb01 multilib f8d35c2432bb32c4f1e779c4287b31ec multiprocessing 61c959fc55c15c00bbb1079d6a71370b ninja-utils 132cbb376048d079b5a012f5467c4e7f toolchain-funcs e867df3870e8ff04a5b94f925be8b06a wrapper 4251d4c84c25f59094fd557e0063a974 xdg-utils ff2ff954e6b17929574eee4efc5152ba +_eclasses_=cmake 518e4c9a6a38dfd7afc54b6a7c5de3da edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 l10n 3c7381c56a184f0dd5ba3fb824808f30 multibuild 05a584848db4901c97fcd94ae7cc3a97 multilib 97566c1a256d07b00848aa767e38a352 multiprocessing 61c959fc55c15c00bbb1079d6a71370b ninja-utils 132cbb376048d079b5a012f5467c4e7f toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa wrapper 4251d4c84c25f59094fd557e0063a974 xdg-utils ff2ff954e6b17929574eee4efc5152ba _md5_=8796fa7c1594d16d8a9b96920de5cf2b diff --git a/metadata/md5-cache/sci-biology/sibsim4-0.20 b/metadata/md5-cache/sci-biology/sibsim4-0.20 index 875e7b1fedd3..9d4184588333 100644 --- a/metadata/md5-cache/sci-biology/sibsim4-0.20 +++ b/metadata/md5-cache/sci-biology/sibsim4-0.20 @@ -6,5 +6,5 @@ KEYWORDS=amd64 x86 LICENSE=GPL-2 SLOT=0 SRC_URI=mirror://sourceforge/sibsim4/SIBsim4-0.20.tar.gz -_eclasses_=multilib f8d35c2432bb32c4f1e779c4287b31ec toolchain-funcs e867df3870e8ff04a5b94f925be8b06a +_eclasses_=multilib 97566c1a256d07b00848aa767e38a352 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa _md5_=da65f25e1cebcf8c22efbffb6b2b5c95 diff --git a/metadata/md5-cache/sci-biology/sim4-20030921-r2 b/metadata/md5-cache/sci-biology/sim4-20030921-r2 index 02da9fa7fdb6..70ca23b85ad5 100644 --- a/metadata/md5-cache/sci-biology/sim4-20030921-r2 +++ b/metadata/md5-cache/sci-biology/sim4-20030921-r2 @@ -6,5 +6,5 @@ KEYWORDS=~amd64 ~ppc ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=mirror://gentoo/sim4-20030921.tar.gz -_eclasses_=multilib f8d35c2432bb32c4f1e779c4287b31ec toolchain-funcs e867df3870e8ff04a5b94f925be8b06a +_eclasses_=multilib 97566c1a256d07b00848aa767e38a352 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa _md5_=d9ac88a2e3ccc00187d880fcca7f5db2 diff --git a/metadata/md5-cache/sci-biology/stride-20011129-r1 b/metadata/md5-cache/sci-biology/stride-20011129-r1 index d80ed33fb800..0ae321bd43a2 100644 --- a/metadata/md5-cache/sci-biology/stride-20011129-r1 +++ b/metadata/md5-cache/sci-biology/stride-20011129-r1 @@ -7,5 +7,5 @@ LICENSE=STRIDE RESTRICT=mirror bindist SLOT=0 SRC_URI=ftp://ftp.ebi.ac.uk/pub/software/unix/stride/src/stride.tar.gz -> stride-20011129.tar.gz https://dev.gentoo.org/~pacho/stride/stride-20060723-update.patch.bz2 -_eclasses_=multilib f8d35c2432bb32c4f1e779c4287b31ec toolchain-funcs e867df3870e8ff04a5b94f925be8b06a +_eclasses_=multilib 97566c1a256d07b00848aa767e38a352 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa _md5_=817435dd944977478aa2ef74ff4b3971 diff --git a/metadata/md5-cache/sci-biology/t-coffee-11.00-r2 b/metadata/md5-cache/sci-biology/t-coffee-11.00-r2 index 9b642a265b75..ea6bc7aa29ed 100644 --- a/metadata/md5-cache/sci-biology/t-coffee-11.00-r2 +++ b/metadata/md5-cache/sci-biology/t-coffee-11.00-r2 @@ -7,5 +7,5 @@ LICENSE=GPL-2 RDEPEND=sci-biology/clustalw sci-chemistry/tm-align SLOT=0 SRC_URI=http://www.tcoffee.org/Packages/Beta/Latest/T-COFFEE_distribution_Version_11.00.4466924.tar.gz -_eclasses_=multilib f8d35c2432bb32c4f1e779c4287b31ec toolchain-funcs e867df3870e8ff04a5b94f925be8b06a +_eclasses_=multilib 97566c1a256d07b00848aa767e38a352 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa _md5_=5c54b109c5b8bef93adbc5f99ddd7114 diff --git a/metadata/md5-cache/sci-biology/tree-puzzle-5.2 b/metadata/md5-cache/sci-biology/tree-puzzle-5.2 index a31f7a6d98a4..e6e45105bf51 100644 --- a/metadata/md5-cache/sci-biology/tree-puzzle-5.2 +++ b/metadata/md5-cache/sci-biology/tree-puzzle-5.2 @@ -10,5 +10,5 @@ RDEPEND=mpi? ( virtual/mpi ) RESTRICT=test SLOT=0 SRC_URI=http://www.tree-puzzle.de/tree-puzzle-5.2.tar.gz -_eclasses_=multilib f8d35c2432bb32c4f1e779c4287b31ec toolchain-funcs e867df3870e8ff04a5b94f925be8b06a +_eclasses_=multilib 97566c1a256d07b00848aa767e38a352 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa _md5_=8bd164fc83c9bb1d9a2e9559a47ff526 diff --git a/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3 b/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3 index fba152728912..7b3480f7b52d 100644 --- a/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3 +++ b/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3 @@ -9,5 +9,5 @@ LICENSE=GPL-2 RDEPEND=x11-libs/wxGTK:3.0[X] SLOT=0 SRC_URI=http://darwin.zoology.gla.ac.uk/~rpage/treeviewx/download/0.5/tv-0.5.1.tar.gz -_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic bc2e7662a4a9a8643be851982a837ddc gnuconfig 9f91b4b0c84e734a87492d4293f03de5 l10n 3c7381c56a184f0dd5ba3fb824808f30 libtool f143db5a74ccd9ca28c1234deffede96 multilib f8d35c2432bb32c4f1e779c4287b31ec toolchain-funcs e867df3870e8ff04a5b94f925be8b06a wrapper 4251d4c84c25f59094fd557e0063a974 wxwidgets 41fd66c54c0faced4c91afc0ef1cc050 +_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 gnuconfig 262062cef0ba4f22b397193da514a350 l10n 3c7381c56a184f0dd5ba3fb824808f30 libtool 241a8f577b9781a42a7421e53448a44e multilib 97566c1a256d07b00848aa767e38a352 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa wrapper 4251d4c84c25f59094fd557e0063a974 wxwidgets 41fd66c54c0faced4c91afc0ef1cc050 _md5_=14493f936bb599dd7faec748cece70f3 diff --git a/metadata/md5-cache/sci-biology/trnascan-se-1.31 b/metadata/md5-cache/sci-biology/trnascan-se-1.31 index e055567939ea..50833b189ad0 100644 --- a/metadata/md5-cache/sci-biology/trnascan-se-1.31 +++ b/metadata/md5-cache/sci-biology/trnascan-se-1.31 @@ -6,5 +6,5 @@ KEYWORDS=amd64 x86 LICENSE=GPL-2 SLOT=0 SRC_URI=http://lowelab.ucsc.edu/software/tRNAscan-SE.tar.gz -> trnascan-se-1.31.tar.gz -_eclasses_=multilib f8d35c2432bb32c4f1e779c4287b31ec perl-functions fea344a91ebf37efadf172c6a3de5a72 toolchain-funcs e867df3870e8ff04a5b94f925be8b06a +_eclasses_=multilib 97566c1a256d07b00848aa767e38a352 perl-functions fea344a91ebf37efadf172c6a3de5a72 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa _md5_=3f4bcdf31fe276f90a95e2f4b311deae diff --git a/metadata/md5-cache/sci-biology/uchime-4.2.40 b/metadata/md5-cache/sci-biology/uchime-4.2.40 index 366f755959c6..5865d1f8f83c 100644 --- a/metadata/md5-cache/sci-biology/uchime-4.2.40 +++ b/metadata/md5-cache/sci-biology/uchime-4.2.40 @@ -7,5 +7,5 @@ KEYWORDS=amd64 x86 ~amd64-linux ~x86-linux LICENSE=public-domain SLOT=0 SRC_URI=https://www.drive5.com/uchime/uchime4.2.40_src.tar.gz -_eclasses_=cmake 518e4c9a6a38dfd7afc54b6a7c5de3da edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic bc2e7662a4a9a8643be851982a837ddc l10n 3c7381c56a184f0dd5ba3fb824808f30 multilib f8d35c2432bb32c4f1e779c4287b31ec multiprocessing 61c959fc55c15c00bbb1079d6a71370b ninja-utils 132cbb376048d079b5a012f5467c4e7f toolchain-funcs e867df3870e8ff04a5b94f925be8b06a wrapper 4251d4c84c25f59094fd557e0063a974 xdg-utils ff2ff954e6b17929574eee4efc5152ba +_eclasses_=cmake 518e4c9a6a38dfd7afc54b6a7c5de3da edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 l10n 3c7381c56a184f0dd5ba3fb824808f30 multilib 97566c1a256d07b00848aa767e38a352 multiprocessing 61c959fc55c15c00bbb1079d6a71370b ninja-utils 132cbb376048d079b5a012f5467c4e7f toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa wrapper 4251d4c84c25f59094fd557e0063a974 xdg-utils ff2ff954e6b17929574eee4efc5152ba _md5_=421c75fd545cd9d38575321e00aeab36 diff --git a/metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r1 b/metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r1 index 0c41b0010bab..11ad5c24de09 100644 --- a/metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r1 +++ b/metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r1 @@ -10,5 +10,5 @@ RDEPEND=dev-libs/openssl:0= media-libs/libpng:0= !<sci-biology/ucsc-genome-brows REQUIRED_USE=server? ( mysql ) SLOT=0 SRC_URI=http://hgdownload.cse.ucsc.edu/admin/jksrc.v260.zip -_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic bc2e7662a4a9a8643be851982a837ddc l10n 3c7381c56a184f0dd5ba3fb824808f30 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib f8d35c2432bb32c4f1e779c4287b31ec preserve-libs dbc9f8d2d49c66467bc327fddd8317bd toolchain-funcs e867df3870e8ff04a5b94f925be8b06a vcs-clean b690a7e9b6c497cf59326a7545df4283 webapp cd327e73cdb307ceb80dcca6b8ad8b52 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 l10n 3c7381c56a184f0dd5ba3fb824808f30 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 97566c1a256d07b00848aa767e38a352 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa vcs-clean b690a7e9b6c497cf59326a7545df4283 webapp cd327e73cdb307ceb80dcca6b8ad8b52 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=35cb93e40ad2d78c190e860dd3944557 diff --git a/metadata/md5-cache/sci-biology/unafold-3.8-r1 b/metadata/md5-cache/sci-biology/unafold-3.8-r1 index 4630bafd131c..29f68d5becab 100644 --- a/metadata/md5-cache/sci-biology/unafold-3.8-r1 +++ b/metadata/md5-cache/sci-biology/unafold-3.8-r1 @@ -9,5 +9,5 @@ LICENSE=unafold RDEPEND=media-libs/freeglut media-libs/gd virtual/opengl SLOT=0 SRC_URI=http://dinamelt.bioinfo.rpi.edu/download/unafold-3.8.tar.bz2 -_eclasses_=edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic bc2e7662a4a9a8643be851982a837ddc l10n 3c7381c56a184f0dd5ba3fb824808f30 multilib f8d35c2432bb32c4f1e779c4287b31ec toolchain-funcs e867df3870e8ff04a5b94f925be8b06a wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=edos2unix 33e347e171066657f91f8b0c72ec8773 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 l10n 3c7381c56a184f0dd5ba3fb824808f30 multilib 97566c1a256d07b00848aa767e38a352 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=140380fdaf468f37ce9bb27d0026ec8e diff --git a/metadata/md5-cache/sci-biology/vcftools-0.1.14 b/metadata/md5-cache/sci-biology/vcftools-0.1.14 index 5beae4fe9a95..777e42425713 100644 --- a/metadata/md5-cache/sci-biology/vcftools-0.1.14 +++ b/metadata/md5-cache/sci-biology/vcftools-0.1.14 @@ -9,5 +9,5 @@ LICENSE=LGPL-3 RDEPEND=sys-libs/zlib dev-lang/perl:= lapack? ( virtual/lapack ) SLOT=0 SRC_URI=https://github.com/vcftools/vcftools/releases/download/v0.1.14/vcftools-0.1.14.tar.gz -_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic bc2e7662a4a9a8643be851982a837ddc gnuconfig 9f91b4b0c84e734a87492d4293f03de5 l10n 3c7381c56a184f0dd5ba3fb824808f30 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib f8d35c2432bb32c4f1e779c4287b31ec perl-functions fea344a91ebf37efadf172c6a3de5a72 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd toolchain-funcs e867df3870e8ff04a5b94f925be8b06a vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 gnuconfig 262062cef0ba4f22b397193da514a350 l10n 3c7381c56a184f0dd5ba3fb824808f30 libtool 241a8f577b9781a42a7421e53448a44e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 97566c1a256d07b00848aa767e38a352 perl-functions fea344a91ebf37efadf172c6a3de5a72 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=82adffd84f2a93745e683b498b79fbe8 diff --git a/metadata/md5-cache/sci-biology/velvet-1.2.10 b/metadata/md5-cache/sci-biology/velvet-1.2.10 index ce23e93d68a3..3f2e0e9a5d5d 100644 --- a/metadata/md5-cache/sci-biology/velvet-1.2.10 +++ b/metadata/md5-cache/sci-biology/velvet-1.2.10 @@ -8,5 +8,5 @@ KEYWORDS=~amd64 ~x86 LICENSE=GPL-2 SLOT=0 SRC_URI=https://www.ebi.ac.uk/~zerbino/velvet/velvet_1.2.10.tgz -_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic bc2e7662a4a9a8643be851982a837ddc l10n 3c7381c56a184f0dd5ba3fb824808f30 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib f8d35c2432bb32c4f1e779c4287b31ec preserve-libs dbc9f8d2d49c66467bc327fddd8317bd toolchain-funcs e867df3870e8ff04a5b94f925be8b06a vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 9a53f21c753d823ba20a22f857c25cb4 flag-o-matic 4134b5c0fb719b9161d10bdaba9e09e5 l10n 3c7381c56a184f0dd5ba3fb824808f30 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 97566c1a256d07b00848aa767e38a352 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=b07b48444158719f00b415b6f8b8e6a1 diff --git a/metadata/md5-cache/sci-biology/wgs-assembler-7.0-r2 b/metadata/md5-cache/sci-biology/wgs-assembler-7.0-r2 index ed3d011b782a..916c1ce980a0 100644 --- a/metadata/md5-cache/sci-biology/wgs-assembler-7.0-r2 +++ b/metadata/md5-cache/sci-biology/wgs-assembler-7.0-r2 @@ -8,5 +8,5 @@ LICENSE=GPL-2 RDEPEND=net-libs/libtirpc x11-libs/libXt !x11-terms/terminator app-shells/tcsh dev-perl/Log-Log4perl SLOT=0 SRC_URI=mirror://sourceforge/wgs-assembler/wgs-7.0.tar.bz2 -_eclasses_=multilib f8d35c2432bb32c4f1e779c4287b31ec toolchain-funcs e867df3870e8ff04a5b94f925be8b06a +_eclasses_=multilib 97566c1a256d07b00848aa767e38a352 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa _md5_=8de6fdef210cdf37e56e086c61983865 diff --git a/metadata/md5-cache/sci-biology/wise-2.4.0_alpha b/metadata/md5-cache/sci-biology/wise-2.4.0_alpha index f73c32bd41fb..173af71c9d6d 100644 --- a/metadata/md5-cache/sci-biology/wise-2.4.0_alpha +++ b/metadata/md5-cache/sci-biology/wise-2.4.0_alpha @@ -9,5 +9,5 @@ LICENSE=BSD RDEPEND=~sci-biology/hmmer-2.3.2 SLOT=0 SRC_URI=ftp://ftp.ebi.ac.uk/pub/software/wise2/wise2.4.0alpha.tar.gz https://dev.gentoo.org/~mgorny/dist/wise-2.4.0_alpha-patchset.tar.bz2 -_eclasses_=epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 multilib f8d35c2432bb32c4f1e779c4287b31ec toolchain-funcs e867df3870e8ff04a5b94f925be8b06a versionator d3fb3ba33acc3bbbdc4d7970227c100d +_eclasses_=epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 multilib 97566c1a256d07b00848aa767e38a352 toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa versionator d3fb3ba33acc3bbbdc4d7970227c100d _md5_=d5566134a062c60e1c2223a1b1283862 diff --git a/metadata/md5-cache/sci-biology/yass-1.14-r2 b/metadata/md5-cache/sci-biology/yass-1.14-r2 index f858a868d697..63b48a4c8025 100644 --- a/metadata/md5-cache/sci-biology/yass-1.14-r2 +++ b/metadata/md5-cache/sci-biology/yass-1.14-r2 @@ -9,5 +9,5 @@ LICENSE=GPL-2 RDEPEND=dmalloc? ( dev-libs/dmalloc ) SLOT=0 SRC_URI=http://bioinfo.lifl.fr/yass/files/yass-1.14.tar.gz -_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 9a53f21c753d823ba20a22f857c25cb4 gnuconfig 9f91b4b0c84e734a87492d4293f03de5 l10n 3c7381c56a184f0dd5ba3fb824808f30 libtool f143db5a74ccd9ca28c1234deffede96 ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib f8d35c2432bb32c4f1e779c4287b31ec preserve-libs dbc9f8d2d49c66467bc327fddd8317bd toolchain-funcs e867df3870e8ff04a5b94f925be8b06a vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 +_eclasses_=autotools 9e63f92c2a5d867fea55ecb160c7d354 desktop c0d27bf73aa08ca05b663dbd31fbef28 edos2unix 33e347e171066657f91f8b0c72ec8773 epatch 9f813bb3c47cf2e60619a663b87c5f4e estack 055c42df72f76a4f45ec92b35e83cd56 eutils 9a53f21c753d823ba20a22f857c25cb4 gnuconfig 262062cef0ba4f22b397193da514a350 l10n 3c7381c56a184f0dd5ba3fb824808f30 libtool 241a8f577b9781a42a7421e53448a44e ltprune 4f3f2db5ce3ccbeeacdf3f94954043aa multilib 97566c1a256d07b00848aa767e38a352 preserve-libs dbc9f8d2d49c66467bc327fddd8317bd toolchain-funcs 9ea1c67b6f8315fdc2568abb674519aa vcs-clean b690a7e9b6c497cf59326a7545df4283 wrapper 4251d4c84c25f59094fd557e0063a974 _md5_=3a4ba9b4e7b8efec51cfc79d261fefd3 |