diff options
Diffstat (limited to 'sci-biology/plink')
| -rw-r--r-- | sci-biology/plink/Manifest | 2 | ||||
| -rw-r--r-- | sci-biology/plink/plink-1.90_pre140514.ebuild | 13 |
2 files changed, 8 insertions, 7 deletions
diff --git a/sci-biology/plink/Manifest b/sci-biology/plink/Manifest index c7a81385ede8..ba6392685d12 100644 --- a/sci-biology/plink/Manifest +++ b/sci-biology/plink/Manifest @@ -1,3 +1,3 @@ DIST plink-1.90_pre140514.zip 822157 BLAKE2B 3c29670862de99c9715bc37d8cffc2b02c0cb25ad746975f253ca1e8094b24668cc6739943c68bfa407471f30835a74c6ad027eaa56a92f13445e0a02854cad3 SHA512 679f1e136b11f35f1d49636bc44ffd17e72e4e38edc5daa270cd963ca39f7b8a80f31905a94de517059e5b3ea7a6bf518ae34a5c2af8a05c530bd6df771606c4 -EBUILD plink-1.90_pre140514.ebuild 1131 BLAKE2B 48e491bcd929d9e126bcc26d1d4c60c8bd6f036ba0b7e8fe0824eece4ad7a4b7c4681918c9dc12af5f247a77b3675fad3dfb10e7fc1152dbb5b651993eb03c4a SHA512 f2058ddd233397fffc694be06cc683020a620a4239e864f5abd1d14456c50fbc11721bd649b4c80185991cb954ddf308edc394ef88e966fa0200435c8f1e8c29 +EBUILD plink-1.90_pre140514.ebuild 1165 BLAKE2B 0b8e58c958acde62b0f59fd81917b088ec997ab877e1c8d83fe917d9d2df5b715a9634d5f69c1263a51090829a8eaa88a553e2980bbcc6d3b6936336705af03e SHA512 c73fccf66c5d11a72657985172c8fbf1b89107fd46a519474dad167f1279c0f6a976b0096e3d550fb2b9835980aa02ad81c68a819b3aec036faf60b341acf9d2 MISC metadata.xml 261 BLAKE2B 3768c926bca545090342a947ba83e706a8954c51b99a5e7b3476ba5198cd326fe1c3b8efb51dfd6be1800682556b8ceea065e388981463ab32f3d687951872f3 SHA512 537da0d3aa2741ebe4442d5dd9b53409decfc9d12ca8e5af8e737c4deb2910c884207e2d441025d19469816100889f04c11038bdffd6a1a15c6217495445090a diff --git a/sci-biology/plink/plink-1.90_pre140514.ebuild b/sci-biology/plink/plink-1.90_pre140514.ebuild index 578881ac0f59..2595c3ab7983 100644 --- a/sci-biology/plink/plink-1.90_pre140514.ebuild +++ b/sci-biology/plink/plink-1.90_pre140514.ebuild @@ -1,36 +1,36 @@ # Copyright 1999-2021 Gentoo Authors # Distributed under the terms of the GNU General Public License v2 -EAPI=5 +EAPI=8 inherit toolchain-funcs DESCRIPTION="Whole genome association analysis toolset" HOMEPAGE="http://pngu.mgh.harvard.edu/~purcell/plink/" SRC_URI="http://pngu.mgh.harvard.edu/~purcell/static/bin/plink140514/plink_src.zip -> ${P}.zip" +S="${WORKDIR}" LICENSE="GPL-2" SLOT="0" KEYWORDS="~amd64 ~x86" -IUSE="" RDEPEND=" sys-libs/zlib virtual/cblas virtual/lapack " -DEPEND=" - ${RDEPEND} +DEPEND="${RDEPEND}" +BDEPEND=" app-arch/unzip virtual/pkgconfig " -S="${WORKDIR}/" - # Package collides with net-misc/putty. Renamed to p-link following discussion with Debian. # Package contains bytecode-only jar gPLINK.jar. Ignored, notified upstream. src_prepare() { + default + sed \ -e 's:zlib-1.2.8/zlib.h:zlib.h:g' \ -i *.{c,h} || die @@ -47,6 +47,7 @@ src_compile() { emake \ CXX=$(tc-getCXX) \ CFLAGS="${CFLAGS}" \ + LDFLAGS="${LDFLAGS}" \ ZLIB="$($(tc-getPKG_CONFIG) --libs zlib)" \ BLASFLAGS="$($(tc-getPKG_CONFIG) --libs lapack cblas)" } |