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-rw-r--r--sci-biology/uchime/Manifest2
-rw-r--r--sci-biology/uchime/uchime-4.2.40.ebuild11
2 files changed, 10 insertions, 3 deletions
diff --git a/sci-biology/uchime/Manifest b/sci-biology/uchime/Manifest
index b64b2369ba21..b9dfe31e446b 100644
--- a/sci-biology/uchime/Manifest
+++ b/sci-biology/uchime/Manifest
@@ -1,4 +1,4 @@
AUX CMakeLists.txt 589 BLAKE2B 183caf5f107482c410296eee8136271e261696a3c11255960b840bd4db16cf461c386fa7374b3a2afb3fd38e97593ad98f9efc621104106cfe4463939c6d0d31 SHA512 06e9f9c8806c27b268968b28fb6059fc6d52295a5d38635612728ac577656fcfae5eb6b15c63e3e9de57e1c8cac832cd4dff70d8a6f3182358a5eb06eb354642
DIST uchime4.2.40_src.tar.gz 66772 BLAKE2B 9133853d616ab6e1e6a397da78fc846ba00fc70c2c375eb16a98fbdec25ba6034bd1c876b7ec4a99305e76e47cf7984c1aa30b64bdc96e125f661a0150bae060 SHA512 c3afecb23d164d9c3db6229f54faa13120ac4d88132d9aef707f8d043091099db4205ac80f60242920af6efc23813b3e7e4966d562bdb75ff53244fd525e656b
-EBUILD uchime-4.2.40.ebuild 513 BLAKE2B 85980c9a60fbfd3d155e371b9638606bc4a0e54ca670a12e5f0f8bfa647c6d27b27879aaa1d5c7f724c2f0135d384b54fa61ab334c9a6382140004261334b7e1 SHA512 0c1a1f0f78d1b8da99153a601f5012ae7b74d05a672dc649cdcdfe62b4231474801165bdb70b4be17182ff8da0c77395638e465997715d94fbdd7b745a942210
+EBUILD uchime-4.2.40.ebuild 654 BLAKE2B d9ddacb096c43c43858f4b4f572304543c7f5ae059fe9c4a8696d1debcd3304af88f360f312fd470ee9f3c733460840537835dfa67a446a18e4bdab6b460a278 SHA512 a7274df383897140b4db99610a2f0fea6b5364799f32b660b78c2e8ef6d9f59b8e629e331629b3b5877380f0e9700967180216e7ad9235f308389c754bc083e9
MISC metadata.xml 896 BLAKE2B 1041ed416b2ba4670f85856ed2bfe1508d3bea0a310a29a9265b04372df51ee39090d76fa6a282c908e26541986bd10dd47ea73260d5180fe382fc97de556509 SHA512 641d91bff3651a49a3b7e15260cf2a758199ae49ece16643d3104f0f4e202938935edeb3bef18f7afc40a4eb1b1b3e469b07fec95d30a5e686e4b66535ff3e7e
diff --git a/sci-biology/uchime/uchime-4.2.40.ebuild b/sci-biology/uchime/uchime-4.2.40.ebuild
index 75827ab3a304..9b346f4fbc8d 100644
--- a/sci-biology/uchime/uchime-4.2.40.ebuild
+++ b/sci-biology/uchime/uchime-4.2.40.ebuild
@@ -4,7 +4,7 @@
EAPI=7
MY_P="${PN}${PV}_src"
-inherit cmake
+inherit cmake flag-o-matic
DESCRIPTION="Fast, accurate chimera detection"
HOMEPAGE="https://www.drive5.com/usearch/manual/uchime_algo.html"
@@ -13,7 +13,6 @@ SRC_URI="https://www.drive5.com/${PN}/${MY_P}.tar.gz"
LICENSE="public-domain"
SLOT="0"
KEYWORDS="amd64 x86 ~amd64-linux ~x86-linux"
-IUSE="debug"
S="${WORKDIR}"/${MY_P}
@@ -21,3 +20,11 @@ src_prepare() {
cp "${FILESDIR}"/CMakeLists.txt . || die
cmake_src_prepare
}
+
+src_configure() {
+ # "myutils.h: error: reference to byte is ambiguous""
+ # bug #786297
+ append-cppflags -std=c++14
+
+ cmake_src_configure
+}