diff options
Diffstat (limited to 'sci-biology/vcftools')
| -rw-r--r-- | sci-biology/vcftools/Manifest | 2 | ||||
| -rw-r--r-- | sci-biology/vcftools/vcftools-0.1.16.ebuild | 37 |
2 files changed, 39 insertions, 0 deletions
diff --git a/sci-biology/vcftools/Manifest b/sci-biology/vcftools/Manifest index 289dfe002b36..6495838a7c8d 100644 --- a/sci-biology/vcftools/Manifest +++ b/sci-biology/vcftools/Manifest @@ -1,4 +1,6 @@ AUX vcftools-0.1.14-buildsystem.patch 1159 BLAKE2B 9eaa626c82b4d23e75f2d31ce31c6161996eb743efbdcb81ad4c3ba306b76a710c4b22670d68178da1b7d2e048d02aea44132f3009d5792dcf248368b53c3482 SHA512 838cade29bbeeee090ea52f546c37b68eee868f3329ceccb710da0dbcf0f14e1b18dcc7b05ceefdbf72d400f450374389649f56fc6981bd86f6e176469b054ea DIST vcftools-0.1.14.tar.gz 342369 BLAKE2B 14be867c0be41767e2c97c8be212f3cff495c1cb6699294fb8a26ac491901599cd1e400cb80c6d609dce36584ee5defdb3b3652657bd127e0c67c5b29a842cc5 SHA512 863a16b3b20d392deba7f04310af95f1ab21be537273692aa104e22d737af2eb1bc54a768af954f06188e0500e4f7a032d1189886eb3a439b108cb8189b14eb7 +DIST vcftools-0.1.16.tar.gz 480575 BLAKE2B 5c0bf67aef8ef4705f621485df4c556f6bace190311c308f0364f3e274cf4818f56f2186905fdfb7459dc4be9664a8b1ff631e2cecd03abd7aa82dcfc7e5aa64 SHA512 c4dd5ceb3ad0512e839154d8a05ef3e7a03cbe52c3099df48775b35460fce7ef10102819c2d1cefa33b98ad09e7bd1608e871978860ec9c0b0c2e781892b22e6 EBUILD vcftools-0.1.14.ebuild 867 BLAKE2B f25ccc182927cd888c548f4eeb120c526716fc759dc7b8081baf76b9f4cd3a404a2828168577000ff816b02aa8d3e6fec52d883fdc2e6f2ec40f1a9712d024d1 SHA512 260555d8964cf329fe3710547b6ddb5600674525703d0b802d18c2a41d02271ff77c56c4d49bf9fb67966bce76a3d6addc88c5a1e86859425bf0574beecc2c34 +EBUILD vcftools-0.1.16.ebuild 818 BLAKE2B 7809d2b55b8e93fea1f4e32a302018e9d2f4b8f289f413be6ea0b34471e639e6f5857f9aeeda1de790abbf773881b63a8c8a31c4f40ba0d83a02363f6a534600 SHA512 e56916000bdcae78e7fd312f078020f2c1e8f007df842d2a0396f15b546dcd945e457fc1771495c7cc242a7c7e938302a9e25c56c884b7722889aa03b54ee550 MISC metadata.xml 409 BLAKE2B 8b6096c95135edaa86244af0fa6c7da5eb131092dc6ff25108723c64183275727c49d9c1fd0f2c4805a3daebc780833e0d03127e58bb5cde3c6ee999b2fca68e SHA512 276a72290a191a7661f130b941ce81dd017242fad97f67efbbf84d9586d097bf5131b12f6fb4bf5f8dc18ee0babcd89d836692b2d912fea5bf90fed18e16885f diff --git a/sci-biology/vcftools/vcftools-0.1.16.ebuild b/sci-biology/vcftools/vcftools-0.1.16.ebuild new file mode 100644 index 000000000000..b06a81dd0a1a --- /dev/null +++ b/sci-biology/vcftools/vcftools-0.1.16.ebuild @@ -0,0 +1,37 @@ +# Copyright 1999-2022 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=8 + +inherit autotools flag-o-matic perl-functions toolchain-funcs + +DESCRIPTION="Tools for working with VCF (Variant Call Format) files" +HOMEPAGE="http://vcftools.sourceforge.net/" +SRC_URI="https://github.com/${PN}/${PN}/releases/download/v${PV}/${P}.tar.gz" + +LICENSE="LGPL-3" +SLOT="0" +KEYWORDS="~amd64 ~x86" +IUSE="lapack" + +RDEPEND="sys-libs/zlib + dev-lang/perl:= + lapack? ( virtual/lapack )" +DEPEND="${RDEPEND}" +BDEPEND="virtual/pkgconfig" + +src_prepare() { + default + eautoreconf +} + +src_configure() { + perl_set_version + + append-flags $($(tc-getPKG_CONFIG) --cflags lapack) + append-libs $($(tc-getPKG_CONFIG) --libs lapack) + + econf \ + $(use_enable lapack pca) \ + --with-pmdir="${VENDOR_LIB#${EPREFIX}/usr}" +} |