diff options
Diffstat (limited to 'sci-libs')
| -rw-r--r-- | sci-libs/Manifest.gz | bin | 44782 -> 44781 bytes | |||
| -rw-r--r-- | sci-libs/dlib/Manifest | 2 | ||||
| -rw-r--r-- | sci-libs/dlib/dlib-19.24.2.ebuild | 106 | ||||
| -rw-r--r-- | sci-libs/libcifpp/Manifest | 3 | ||||
| -rw-r--r-- | sci-libs/libcifpp/libcifpp-5.1.0.1.ebuild | 38 |
5 files changed, 149 insertions, 0 deletions
diff --git a/sci-libs/Manifest.gz b/sci-libs/Manifest.gz Binary files differindex d52f33d478eb..87bb5df919e6 100644 --- a/sci-libs/Manifest.gz +++ b/sci-libs/Manifest.gz diff --git a/sci-libs/dlib/Manifest b/sci-libs/dlib/Manifest index 4c2d69a3f1c2..47a9d130c938 100644 --- a/sci-libs/dlib/Manifest +++ b/sci-libs/dlib/Manifest @@ -1,3 +1,5 @@ +DIST dlib-19.24.2.tar.gz 22252165 BLAKE2B cd6a911e16d9ff6cf94a4334e84983a9c48da42e3f696de20fb28a5bba9720507ec19ddc984bb753288f86359a1c19cdf15ed29f18c43769a1c17d3177d8dedf SHA512 a38a3079c169b16d81d7aca9fc294bcd63bd2dc1a21573f9141ca310542da3629b6523fa6f348be8b41bf5b478c0846a13a4c3fee77f1ac38dfbfc4a01effb57 DIST dlib-19.24.tar.gz 10863367 BLAKE2B eda85c6ec38fcf212754aae2cdb68539425028735b5148a2f6668ac19f2583129585a7101b74fe202fbfa3d3d2f09e533805a82f8291540919a7eb11483812e8 SHA512 f6ef2fec0977782cdcc15c6340bd91e3471294332de391405f14d86e9fd0cfcc8195fbf5b702f8d269a90b06db23a8134d112ed3fcfb780ff0433d988c41d199 +EBUILD dlib-19.24.2.ebuild 2513 BLAKE2B a593d1d7842022e8b58650a1cfd9ed8b0bcd3b4c8e058e3846cf43fac4bce02664a6914274f783b49ad455edefa6eb066eb073d998d1f86b6ab5ae9aa91426b4 SHA512 45a7c8e72572a336d874cabd125695028c369dedee5974b73ae3f7285e789c43f1e02f09b93548d40786b83f80ededa1dee6ebabed1cdf858dab376407b15ac2 EBUILD dlib-19.24.ebuild 2513 BLAKE2B 8faf0274b9ef05963a34b12c2bd47fdf89999d0af7cde697ad671b5de39b565a0b23ca555c1824575781e6bd2cf9fe2cbe8e55673e74ecc14e67ec5ab768b342 SHA512 d3934515077f1d3810bf7dbec5c37b480c615ce24075ef0048c3076eeaf1122d32f1d241620f77231c2fc6c508bb074b9bf886055e639a77298060b3c8eb7b6a MISC metadata.xml 1003 BLAKE2B 3c4e623c6abbd4d1ec8a9402009b2d01e6edb547bfd24f03c27853d0386170833553feecc7b0f6b751a3ad4e52f0575a4a87fbcf801a0952fc3d4e5c77645a43 SHA512 2c59cabd74e9433b9b31b96d1f476c2c9200cce51960c09de5ebd7aabbfe4cff1f4449a6a9ecaaf1907f58dd12c04039a9f58f69f2d036bc18bf82b4438cbc01 diff --git a/sci-libs/dlib/dlib-19.24.2.ebuild b/sci-libs/dlib/dlib-19.24.2.ebuild new file mode 100644 index 000000000000..dd936a0dc155 --- /dev/null +++ b/sci-libs/dlib/dlib-19.24.2.ebuild @@ -0,0 +1,106 @@ +# Copyright 1999-2023 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=8 + +PYTHON_COMPAT=( python3_{9..11} ) +DISTUTILS_USE_PEP517=setuptools +DISTUTILS_OPTIONAL=1 +inherit cmake cuda distutils-r1 + +DESCRIPTION="Numerical and networking C++ library" +HOMEPAGE="http://dlib.net/" +SRC_URI="https://github.com/davisking/dlib/archive/v${PV}.tar.gz -> ${P}.tar.gz" + +LICENSE="Boost-1.0" +SLOT="0/${PV}" +KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" +IUSE="cblas cuda debug examples gif jpeg lapack mkl png python sqlite test X cpu_flags_x86_avx cpu_flags_x86_sse2 cpu_flags_x86_sse4_1" +REQUIRED_USE="python? ( png ${PYTHON_REQUIRED_USE} )" +RESTRICT="!test? ( test )" + +# doc needs a bunch of deps not in portage +RDEPEND=" + cblas? ( virtual/cblas ) + cuda? ( dev-libs/cudnn:= ) + gif? ( media-libs/giflib:= ) + jpeg? ( media-libs/libjpeg-turbo:0= ) + lapack? ( virtual/lapack ) + mkl? ( sci-libs/mkl ) + png? ( media-libs/libpng:0= ) + python? ( ${PYTHON_DEPS} ) + sqlite? ( dev-db/sqlite:3 ) + X? ( x11-libs/libX11 )" +DEPEND="${RDEPEND}" +BDEPEND=" + python? ( + ${DISTUTILS_DEPS} + test? ( + dev-python/pytest[${PYTHON_USEDEP}] + dev-python/pip[${PYTHON_USEDEP}] + ) + ) +" + +DOCS=( docs/README.txt ) + +src_prepare() { + use cuda && cuda_src_prepare + cmake_src_prepare + use python && distutils-r1_src_prepare +} + +src_configure() { + local mycmakeargs=( + -DDLIB_ENABLE_ASSERTS=$(usex debug) + -DDLIB_ENABLE_STACK_TRACE=$(usex debug) + -DDLIB_GIF_SUPPORT=$(usex gif) + -DDLIB_JPEG_SUPPORT=$(usex jpeg) + -DDLIB_PNG_SUPPORT=$(usex png) + -DDLIB_LINK_WITH_SQLITE3=$(usex sqlite) + -DDLIB_NO_GUI_SUPPORT=$(usex X OFF ON) + -DDLIB_USE_BLAS=$(usex cblas) + -DDLIB_USE_CUDA=$(usex cuda) + -DDLIB_USE_LAPACK=$(usex lapack) + -DUSE_AVX_INSTRUCTIONS=$(usex cpu_flags_x86_avx) + -DUSE_SSE2_INSTRUCTIONS=$(usex cpu_flags_x86_sse2) + -DUSE_SSE4_INSTRUCTIONS=$(usex cpu_flags_x86_sse4_1) + ) + cmake_src_configure + use python && distutils-r1_src_configure +} + +src_compile() { + cmake_src_compile + use python && distutils-r1_src_compile +} + +src_test() { + ( + local BUILD_DIR="${BUILD_DIR}"/dlib/test + mkdir -p "${BUILD_DIR}" || die + cd "${BUILD_DIR}" >/dev/null || die + + local CMAKE_USE_DIR="${S}"/dlib/test + cmake_src_configure + cmake_build + + ./dtest --runall || die "Tests failed" + ) + + use python && distutils-r1_src_test +} + +python_test() { + epytest +} + +src_install() { + cmake_src_install + use python && distutils-r1_src_install + + if use examples; then + dodoc -r examples + docompress -x /usr/share/doc/${PF} + fi +} diff --git a/sci-libs/libcifpp/Manifest b/sci-libs/libcifpp/Manifest index a8b2682e395e..b2ad06140b4f 100644 --- a/sci-libs/libcifpp/Manifest +++ b/sci-libs/libcifpp/Manifest @@ -1,5 +1,8 @@ AUX libcifpp-5.0.8-missing-include.patch 553 BLAKE2B 0bcda2161396c3a863f2b4bc0074ac1298c57fa67cdc7771c05bd56b99e8d88a2124dc361aeef99e4fe2aa06f8ba1af9bccd4f2c20c90ac3a8e8fcd0f211d6fc SHA512 deb17752ac3bf005e8936ab5894f0b5ca3eb8fcb59a41dff511111b0eddf88ff983504629888904ceaca17826710609add09e0075bf5c8726767d2a8589b1e90 DIST libcifpp-5.0.8-components.cif.gz 89984770 BLAKE2B d42147d4da56589ac30de9fc3cdacd43e036f548eebf80a19d878c4bf0be535578eec6b78625e1ba60db53090ce5e4b9a3e59b06705f208b660fb2e37e79d1c2 SHA512 5f9705714816656aa910b571d77966926d66b2724136119857138975f8be5bb2e889e0c9b28ef1340a72857afb5831dba529b96e8dfc796f739e24b0dcab0424 DIST libcifpp-5.0.8.tar.gz 1873629 BLAKE2B 07257a898b1253995880fea9b416b3a7681122b544f8397d353fda4069c33f4a6c2d5cf2210983acf68dc56cb27a20d780461c7c2485a445855e7b45cccd326d SHA512 4ea67fa4a93218fe96289de95591faa9411508e41e308f4ff470033fb0deb4029a86eafb7ba9295807fe3b350e8cc9f2267f7735ee8b1dbb431ee0275db2b8cc +DIST libcifpp-5.1.0.1-components.cif.xz 58001076 BLAKE2B 4d838e47c74540af54256f6124bd79c9c372c6768eeeabc620b54e1b2c49b2c2adc0b937f195f9544b9f2362fb60c209fb74f88c451ba6d50fe5da5f15ba768b SHA512 e7933a78a61e40c4b2e2aedfda0f36c79939fadc71c78cfde59fcec4de5c2b6c9cf1dbccc383a2f0bbf48744c776cdbb5e7c862e47a6fd2ec229c811caa9b5bc +DIST libcifpp-5.1.0.1.tar.gz 2242975 BLAKE2B 7cada39ed6096ee12e662422d1676dadbf0ae71958c206ef4105daeeaaa9b14cbf17143c3baf4e2914e8289801667829af1361d643846827044d7c8e1eb15fa2 SHA512 9ca3d7db5889d1baf713475fbfeaf355f45ecb139c838da6348d4bb054c2241204499d3f46e4d45075f2d60f6c48e29866ccf2994c26098b303573d7ba39204d EBUILD libcifpp-5.0.8.ebuild 975 BLAKE2B 7e001c18b1feea681575f3c4b60b07602cd270295a8b16ee722f01fdf46e4f04d53e5b5748c64341c6d01969ddd2258f0beb513c96c93f6933eab6d07169f26e SHA512 a3a32d9f577a550abf60b0eef1500ecc5bd56af880bc9f1d8777709320ad485e83727a9f2d3e7069b552b803206245f8fbe56189a5ee43489a33f88d8a821b4a +EBUILD libcifpp-5.1.0.1.ebuild 890 BLAKE2B 62a828f715d25d5368f94ad7e226d19caf45b0c37d311e5f6dcd13a3ec5224f296b69dc074891462063ceb92ee1153a7a1552731bef2800c914b201f76bca916 SHA512 0714de6553e370fb4ddb3d50c4e8fdfb227b671a581ef6d1a21257aee932ba816b3f41600c398cef4cd8ffbf99c7ab7824e79af66ab0f8ce877d585614444aad MISC metadata.xml 299 BLAKE2B 88091a7fbc350db0c22800bcd0de80ec406f7b8a0187b29d8660978384179f8194f7aa794bf0bd3b3f4ab68ac662ca62479319e218d2622e2a3e470653848251 SHA512 e6bc610ae1cf40584ba3067ece0c0c85d08ad0bbb99f5ecd8281c41b04ff932db838926a6ff238794ff46eb8035eb57c750e088bd3f164180952a9e597544e14 diff --git a/sci-libs/libcifpp/libcifpp-5.1.0.1.ebuild b/sci-libs/libcifpp/libcifpp-5.1.0.1.ebuild new file mode 100644 index 000000000000..8d30793f975e --- /dev/null +++ b/sci-libs/libcifpp/libcifpp-5.1.0.1.ebuild @@ -0,0 +1,38 @@ +# Copyright 1999-2023 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=8 +inherit cmake + +DESCRIPTION="Code to work with mmCIF and PDB files" +HOMEPAGE="https://github.com/PDB-REDO/libcifpp" +# Update components file on every bump +# ftp://ftp.wwpdb.org/pub/pdb/data/monomers/components.cif.gz +SRC_URI=" + https://github.com/PDB-REDO/${PN}/archive/refs/tags/v${PV}.tar.gz -> ${P}.tar.gz + https://dev.gentoo.org/~pacho/${PN}/${P}-components.cif.xz +" + +LICENSE="BSD-2" +SLOT="0" +KEYWORDS="~amd64 ~x86" +IUSE="test" +RESTRICT="!test? ( test )" + +DEPEND=" + dev-cpp/eigen:3 + dev-libs/boost:= +" +RDEPEND="${DEPEND}" + +src_configure() { + cp "${WORKDIR}"/${P}-components.cif data/components.cif || die + + local mycmakeargs=( + -DBUILD_SHARED_LIBS=ON + -DCIFPP_DOWNLOAD_CCD=OFF + -DCIFPP_INSTALL_UPDATE_SCRIPT=OFF + -DENABLE_TESTING="$(usex test)" + ) + cmake_src_configure +} |