summaryrefslogtreecommitdiff
path: root/sci-libs
diff options
context:
space:
mode:
Diffstat (limited to 'sci-libs')
-rw-r--r--sci-libs/Manifest.gzbin44402 -> 44399 bytes
-rw-r--r--sci-libs/dealii/Manifest16
-rw-r--r--sci-libs/dealii/dealii-9.3.1-r5.ebuild161
-rw-r--r--sci-libs/dealii/dealii-9.3.3-r1.ebuild161
-rw-r--r--sci-libs/dealii/dealii-9.4.0-r1.ebuild (renamed from sci-libs/dealii/dealii-9.4.0.ebuild)9
-rw-r--r--sci-libs/dealii/dealii-9.4.1-r1.ebuild (renamed from sci-libs/dealii/dealii-9.4.1.ebuild)9
-rw-r--r--sci-libs/dealii/files/dealii-9.1.1-fix_boost_177.patch12
-rw-r--r--sci-libs/dealii/files/dealii-9.3.3-fix_p4est_detection.patch41
8 files changed, 22 insertions, 387 deletions
diff --git a/sci-libs/Manifest.gz b/sci-libs/Manifest.gz
index 3eace07001b3..4c1c765de3c3 100644
--- a/sci-libs/Manifest.gz
+++ b/sci-libs/Manifest.gz
Binary files differ
diff --git a/sci-libs/dealii/Manifest b/sci-libs/dealii/Manifest
index 735db49aa09b..2288d92ad23b 100644
--- a/sci-libs/dealii/Manifest
+++ b/sci-libs/dealii/Manifest
@@ -1,17 +1,13 @@
-AUX dealii-9.1.1-fix_boost_177.patch 470 BLAKE2B 0e701500943bf400d021ac787e089485efaa58a0659e96de3bc92d785c26fbe5f63360a5b81713d868bce2e04a6f02a19bd809e28017e2c2a8ce8ec724350345 SHA512 350da7118fa94b04e5d53c681a51c60f450536ed82093de1106cfb2f5d60111db41dad46929c1831efd4ff902558a17a8a01c71cca85d456c6b17e29fd2cec31
AUX dealii-9.1.1-no-ld-flags.patch 1044 BLAKE2B fed995fbd5563bfee6b4dd232d5d9aaecd8f0d206f06679b5d79022420c83ac2752414417499ac9181c25ddc594e492bf8d6b6af19fdfd1f047e7e089193de5d SHA512 15346b31f4ac5df3b1a3a3dcb215d4bd49e3e67480c86d4c78dbd5d27ae33f6cfa8b03fdc561e38090a2c22ae8ba71d13cd9b1bbdda3eedefd498f5cedfd0a09
-AUX dealii-9.3.3-fix_p4est_detection.patch 1414 BLAKE2B c2ac403a3e019dff1aebfe1d9c0d172ef3b7c8e1a0ba8d256923a155388c273d152ce26357d395a27c0586e3b2f6597ed07e29a8d37086a7c3e8d29b67eeb302 SHA512 dd7749d5ad47281184bc16c9310cc0c6d4fef7fa56a2df72f179589064ed613649c72648bd2a01b239afaa8a4c49c3203592ef0f27a99c5294e52918947a5873
-DIST dealii-9.3.1-offline_documentation.tar.gz 342389060 BLAKE2B 71b47816dd22f490168f91c667308ecf10d5733bb4e4d6f7f214dfa729f47e6f44bf32382167f2f6c864038d04c994cab7ef91ae647b4188c53995c5c2904bf3 SHA512 7ab70b7821924a4383f2d46bcb44e702858206a8444870d3e2282d726b2c1cf3009f615888206312aed34eae9595ff19664da422e33c47720cce5c5fd37c1e18
-DIST dealii-9.3.1.tar.gz 24459280 BLAKE2B c7f1d461017da24efd6f3247217fd1b889e0cbf2ac62c3fd305e03aed90d5ba82b58ceb84d34a84608b833b734e12abc77a63693aaa6eed767b4f5f157233ba0 SHA512 c3ba3e16fa4792bb4f3e85163e67b08271c84faff72c49b858a955851401adf2499e278790803061a61c4024964f6da3f0ef7b09c0370d8d0b5af16b7c3bdaef
-DIST dealii-9.3.3-offline_documentation.tar.gz 346914833 BLAKE2B 8a3661f44aef70c25837fca67175e410f1404991a5fa3698d2e732f1ae045f987a3d9c2fb21294de32768533968e94178f7537f2c3221afdb427fb10478257b5 SHA512 05d8c9573e8277c88f81ff318d295b099e2241c5358cc243eaae35044703a8abc8cac7b7b8049b3527d167f60b11820bd8418fde2e6a6929c03abbf6cc5b6658
-DIST dealii-9.3.3.tar.gz 24462944 BLAKE2B 581a8c618fab96127ac95fe9ba5ea5410eb6f9193ce96b6a0d8d28dd125689fb11868115ae8163b7e223970321ddd75347ea21568ea1cdc1e783f94506f00d91 SHA512 31a05a2f539dd2336683c2ab887fef47f08a5127fe23163128036f3143c0c77dca08004b014704e1c7cc07d7578458636715dcbefd654e5fc4511d6d315b604d
DIST dealii-9.4.0-offline_documentation.tar.gz 390747598 BLAKE2B 6e8ed938b31a9e6bbbdd5baacce056edc31d489ecd3e9528283650f431d004ca122c968567fe342744d52bab8f8be53ab1b20d56636e2dc48f8cf551791a08bd SHA512 703eb50150ae5bd77f0d84271babd50483c3a9b069abb5b7e8827d00efaa5d189a43ac54f0ef8b2f746b12a10dc611669f5fddd655241a66af4915ec1d458185
+DIST dealii-9.4.0-offline_documentation.tar.gz.asc 246 BLAKE2B cb828efcdb38b88af9abc3be95c90c126144ee1edd076e2c47c7a90dad1df3ac29ce104de7be551fb93671b0b3ffe44b737fcba3841ccb0921e1f0795360fec4 SHA512 59f8997f9a19580861f0c7afd06b9737519c0dbf6990c4569f5c8dbd05e7e41dce19d1b9a639504696be2f99f6e8c555086dcd85c43976ccd5c7ebf007864dc0
DIST dealii-9.4.0.tar.gz 30297914 BLAKE2B 6beb4c7b83f5316e703d4b77340900c376e622b1dc59c9058a8927174a8c6991994957588b6adf88238e72eec93f8941bfbfb2d0bb01070560468d051d9829f8 SHA512 3be740fbabff65a18870496f483ac4ed6d35c8a53b5128dd09b2dfabe82d60e4a75f02fd508b44f6c93805999aab98f551154f10ca2ad5fabede65c2d6dce320
+DIST dealii-9.4.0.tar.gz.asc 246 BLAKE2B 972d3fa18c83ff9b3aff996efaa0e6d1db848f64a46afb80b083c4f228d42ab1a2d7c5f6172a1ad3ae8542ca9c2a351c2badf98b9104dd5448a0f3d0cbd73e2a SHA512 b0754c891356bcf30d2d32b4ecc780d2ba814b720426d604c0596ebdbdb1a8ae00357b04596c03f75e809593067b022b9e7c08584f88e35f05248472dde44f3b
DIST dealii-9.4.1-offline_documentation.tar.gz 392007419 BLAKE2B 81404b02ba7dc97a0314f52fa9d775183981864288f4ab4ca81b550a1763d90cb5b04b32c056008ad60a7829b929c78edd80cbeeeb861e4ef638780c13d80aa7 SHA512 9bbaf6e9a478ac643e87f2f07918c8a5216e17b0ddaeba4beb2acde9ea54833e2f0e7d11f61b2cac8b986e442dbb181317b53e1a40a807e7c098167bfd073266
+DIST dealii-9.4.1-offline_documentation.tar.gz.asc 246 BLAKE2B 9ace22c9b174e642cd3fba94c165d816c62814f892f5f6f272efa0301613dc55251152825e726fc6cf7e89bbfb7fa3552ec58ad426a7d58a74ecb89b9072f742 SHA512 50b43dd34a0687395f516f4910581df71054fa8be3c98006566ea649d0af866d38c9793da548ba6bdb7a9fec452dfb6d928d336aace943522d7c3f854209b81b
DIST dealii-9.4.1.tar.gz 30298204 BLAKE2B 499f542c7a7f071d04048127199c7bebf5668b6e8d13fc2701dd18e28165442e58112ee9e4926e16a592bffdd5d7b7c240eea55808e5f9c021961f7e44b7da79 SHA512 39089aff462d3ff4244ce75f74a4cd908f8f72a81dcc3fb02ca91b3cad2442ceb78677e72cd928b36a04d352c4baa146a25fa5e14c886ca9e2bad0be0069f7b8
-EBUILD dealii-9.3.1-r5.ebuild 5081 BLAKE2B 1422f7a68e01424b233f3b85afeb1e35ed98c2311229386c9d47165141ddd8a55e858ab0f3975994ca4e455a60d65e536e2fe0f76ca58c950faa4c8b1e6eb931 SHA512 4592ab31c5b6d15e0c23ed8d55aeaede0cb6b58fc788bb6d56e156e28afc20363ce9d75e613d5bda1fc8765c3950f3962e8280f9ee936751813fbcbfad0c3ec8
-EBUILD dealii-9.3.3-r1.ebuild 5080 BLAKE2B 1fcaf183a79fc3284cb2ef4d4d169a47f63c628b972b5ba113346911a2c182826c93647dfdb3768b8f54a3b1934406fc2ed2003ed29fecc7f1970d8e30be09bb SHA512 b4f065ae9f3d438a825e8450b2a7cf8561ac14e504ff1d4742d9d109efea3196aef402d40cde33ae0890be2fb3148584eb493da458730866c9fa4ffdcfc01381
-EBUILD dealii-9.4.0.ebuild 5470 BLAKE2B 18acd6401019d894868165b5afe4df60f574ddd6016917f24c77c803613105277e73b6f3d2b07877f674d6f296c0931526b54f71f7f33ab54c5ebd2d19fab639 SHA512 92ac36201ae15d58f12d380bedb3dd62b70d4c9dec919ccacce0ceccae1f5163540aa722b43b96863534538f820bbc4a07702aa39d77f91e0aad35bbfb5463b4
-EBUILD dealii-9.4.1.ebuild 5470 BLAKE2B 18acd6401019d894868165b5afe4df60f574ddd6016917f24c77c803613105277e73b6f3d2b07877f674d6f296c0931526b54f71f7f33ab54c5ebd2d19fab639 SHA512 92ac36201ae15d58f12d380bedb3dd62b70d4c9dec919ccacce0ceccae1f5163540aa722b43b96863534538f820bbc4a07702aa39d77f91e0aad35bbfb5463b4
+DIST dealii-9.4.1.tar.gz.asc 246 BLAKE2B dbb1dc7b3e8a97f29287f154d11cd3db2566fdc4c7667fa57e686e2feba33f2115546408365f0e8f490ba593cb582b12489de373da3e33e8702b6e16804c7ebf SHA512 eb987d34f19b59d523d79f3c2c99f5f3125b1d0c71af0eb32b77ad5959d6197b79f1971a8a79dbc52bab698335dcb6091aac88c51d845a1e07d3681c089754c7
+EBUILD dealii-9.4.0-r1.ebuild 5816 BLAKE2B 137b29949c766c705c7a52b664e068d8bfb5cbaaa18f0f1529100e72b86c15822385c705d0466863f2bb79056e7bdddfc0b62037ee985dc584d10c3d80562086 SHA512 19653f1d97a14ee787d29c56cc5b8dac6f6d54641da4789cb6764001ce4990fb3a951f8e27b6760cc32719846adc18c32870e42fd33ab937d5b1d1194ca8da86
+EBUILD dealii-9.4.1-r1.ebuild 5816 BLAKE2B 137b29949c766c705c7a52b664e068d8bfb5cbaaa18f0f1529100e72b86c15822385c705d0466863f2bb79056e7bdddfc0b62037ee985dc584d10c3d80562086 SHA512 19653f1d97a14ee787d29c56cc5b8dac6f6d54641da4789cb6764001ce4990fb3a951f8e27b6760cc32719846adc18c32870e42fd33ab937d5b1d1194ca8da86
EBUILD dealii-9999.ebuild 5425 BLAKE2B 67f73b1cbc01c9884d8ab921f8e1eb8238ea31cb735ece3edb5706cb594cac7decc57e62df3819be85f4bf0ad8ae650ac5c2a43da38320a3131aa3eccd8d9280 SHA512 fd560c46dbb2fc9c440f00c3c48f9168d38c3d38f461c87c72ba168858a47d43258a72564c3c03dfbc09c47bff77e1cfe7541dc6acc85a14664594ba079c3378
MISC metadata.xml 2391 BLAKE2B 904b31425264a2da185a49a388bfb9415ca95c818e3c97774ccdf8e26baa706f0d2f4e6478dec4854a0164e5cdac512e4476f09ba6e3ec84d8a4b45b0e4d5131 SHA512 1bda00424bf63b1520818b3b350f08fc995200214a659435ce16b979de95077b82ed581320c15c9799d1934c0b58fcb56552329ebd4c5e9d93f01110027091d0
diff --git a/sci-libs/dealii/dealii-9.3.1-r5.ebuild b/sci-libs/dealii/dealii-9.3.1-r5.ebuild
deleted file mode 100644
index 78407e89e17e..000000000000
--- a/sci-libs/dealii/dealii-9.3.1-r5.ebuild
+++ /dev/null
@@ -1,161 +0,0 @@
-# Copyright 1999-2022 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=7
-
-# deal.II uses its own FindLAPACK.cmake file that calls into the system
-# FindLAPACK.cmake module and does additional internal setup. Do not remove
-# any of these modules:
-CMAKE_REMOVE_MODULES_LIST=""
-
-inherit cmake flag-o-matic
-
-DESCRIPTION="Solving partial differential equations with the finite element method"
-HOMEPAGE="https://www.dealii.org/"
-
-if [[ ${PV} = *9999* ]]; then
- inherit git-r3
- EGIT_REPO_URI="https://github.com/dealii/dealii.git"
- SRC_URI=""
-else
- SRC_URI="https://github.com/${PN}/${PN}/releases/download/v${PV}/${P}.tar.gz
- doc? (
- https://github.com/${PN}/${PN}/releases/download/v${PV}/${P}-offline_documentation.tar.gz
- )"
- KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
-fi
-
-LICENSE="LGPL-2.1+"
-SLOT="0"
-IUSE="
- adolc assimp arpack cpu_flags_x86_avx cpu_flags_x86_avx512f
- cpu_flags_x86_sse2 cuda +debug doc +examples ginkgo gmsh +gsl hdf5
- +lapack metis mpi muparser opencascade p4est petsc
- scalapack slepc +sparse static-libs sundials symengine trilinos
-"
-
-# TODO: add slepc use flag once slepc is packaged for gentoo-science
-REQUIRED_USE="
- p4est? ( mpi )
- slepc? ( petsc )
- trilinos? ( mpi )"
-
-RDEPEND="dev-libs/boost:=
- app-arch/bzip2
- sys-libs/zlib
- dev-cpp/tbb:=
- adolc? ( sci-libs/adolc )
- arpack? ( sci-libs/arpack[mpi=] )
- assimp? ( media-libs/assimp:= )
- cuda? ( dev-util/nvidia-cuda-toolkit )
- ginkgo? ( sci-libs/ginkgo )
- gmsh? ( sci-libs/gmsh )
- gsl? ( sci-libs/gsl:= )
- hdf5? ( sci-libs/hdf5[mpi=] )
- lapack? ( virtual/lapack )
- metis? (
- >=sci-libs/metis-5
- mpi? ( >=sci-libs/parmetis-4 )
- )
- mpi? ( virtual/mpi[cxx] )
- muparser? ( dev-cpp/muParser )
- opencascade? ( sci-libs/opencascade:= )
- p4est? ( sci-libs/p4est[mpi] )
- petsc? ( sci-mathematics/petsc[mpi=] )
- scalapack? ( sci-libs/scalapack )
- slepc? ( sci-mathematics/slepc[mpi=] )
- sparse? ( sci-libs/umfpack )
- sundials? ( sci-libs/sundials:= )
- symengine? ( >=sci-libs/symengine-0.4:= )
- trilinos? ( sci-libs/trilinos )"
-
-DEPEND="${RDEPEND}
- virtual/pkgconfig
- doc? ( app-doc/doxygen[dot] dev-lang/perl )"
-
-PATCHES=(
- "${FILESDIR}"/${PN}-9.1.1-no-ld-flags.patch
- "${FILESDIR}"/${PN}-9.1.1-fix_boost_177.patch
-)
-
-src_configure() {
- # deal.II needs a custom build type:
- local CMAKE_BUILD_TYPE=$(usex debug DebugRelease Release)
-
- local mycmakeargs=(
- -DDEAL_II_PACKAGE_VERSION="${PV}"
- -DCMAKE_INSTALL_RPATH_USE_LINK_PATH=OFF
- -DDEAL_II_ALLOW_AUTODETECTION=OFF
- -DDEAL_II_ALLOW_PLATFORM_INTROSPECTION=OFF
- -DDEAL_II_COMPILE_EXAMPLES=OFF
- -DDEAL_II_DOCHTML_RELDIR="share/doc/${P}/html"
- -DDEAL_II_DOCREADME_RELDIR="share/doc/${P}"
- -DDEAL_II_COMPILE_EXAMPLES=OFF
- -DDEAL_II_EXAMPLES_RELDIR="share/doc/${P}/examples"
- -DDEAL_II_LIBRARY_RELDIR="$(get_libdir)"
- -DDEAL_II_SHARE_RELDIR="share/${PN}"
- -DDEAL_II_WITH_ZLIB=ON
- -DDEAL_II_WITH_ADOLC="$(usex adolc)"
- -DDEAL_II_WITH_ASSIMP="$(usex assimp)"
- -DDEAL_II_WITH_ARPACK="$(usex arpack)"
- -DDEAL_II_WITH_CUDA="$(usex cuda)"
- -DDEAL_II_WITH_GINKGO="$(usex ginkgo)"
- -DDEAL_II_COMPONENT_DOCUMENTATION="$(usex doc)"
- -DDEAL_II_COMPONENT_EXAMPLES="$(usex examples)"
- -DDEAL_II_WITH_GMSH="$(usex gmsh)"
- -DDEAL_II_WITH_GSL="$(usex gsl)"
- -DDEAL_II_WITH_HDF5="$(usex hdf5)"
- -DDEAL_II_WITH_LAPACK="$(usex lapack)"
- -DDEAL_II_WITH_METIS="$(usex metis)"
- -DDEAL_II_WITH_MPI="$(usex mpi)"
- -DDEAL_II_WITH_MUPARSER="$(usex muparser)"
- -DDEAL_II_WITH_OPENCASCADE="$(usex opencascade)"
- -DDEAL_II_WITH_P4EST="$(usex p4est)"
- -DDEAL_II_WITH_PETSC="$(usex petsc)"
- -DDEAL_II_WITH_SCALAPACK="$(usex scalapack)"
- -DDEAL_II_WITH_SLEPC="$(usex slepc)"
- -DDEAL_II_WITH_SUNDIALS="$(usex sundials)"
- -DDEAL_II_WITH_SYMENGINE="$(usex symengine)"
- -DDEAL_II_WITH_UMFPACK="$(usex sparse)"
- -DBUILD_SHARED_LIBS="$(usex !static-libs)"
- -DDEAL_II_PREFER_STATIC_LIBS="$(usex static-libs)"
- -DDEAL_II_WITH_TBB=ON
- -DDEAL_II_WITH_TRILINOS="$(usex trilinos)"
- )
-
- use opencascade && mycmakeargs+=(
- -DCMAKE_PREFIX_PATH="/usr/$(get_libdir)/opencascade"
- )
-
- # Do a little dance for purely cosmetic QA reasons. The build system
- # does query for the highest instruction set first and skips the other
- # variables if a "higher" variant is set
- if use cpu_flags_x86_avx512f; then
- mycmakeargs+=( -DDEAL_II_HAVE_AVX512=yes )
- append-cxxflags "-mavx512f"
- elif use cpu_flags_x86_avx; then
- mycmakeargs+=( -DDEAL_II_HAVE_AVX=yes )
- append-cxxflags "-mavx2"
- elif use cpu_flags_x86_avx; then
- mycmakeargs+=( -DDEAL_II_HAVE_SSE2=yes )
- append-cxxflags "-msse2"
- fi
-
- cmake_src_configure
-}
-
-src_install() {
- if use doc && [[ ${PV} != *9999* ]]; then
- # copy missing images to the build directory:
- cp -r "${WORKDIR}"/doc/doxygen/deal.II/images \
- "${BUILD_DIR}"/doc/doxygen/deal.II || die
- # replace links:
- sed -i \
- 's#"http://www.dealii.org/images/steps/developer/\(step-.*\)"#"images/\1"#g' \
- "${BUILD_DIR}"/doc/doxygen/deal.II/step_*.html || die "sed failed"
- fi
- cmake_src_install
-
- # decompress the installed example sources:
- use examples && docompress -x /usr/share/doc/${PF}/examples
-}
diff --git a/sci-libs/dealii/dealii-9.3.3-r1.ebuild b/sci-libs/dealii/dealii-9.3.3-r1.ebuild
deleted file mode 100644
index a093157e2d71..000000000000
--- a/sci-libs/dealii/dealii-9.3.3-r1.ebuild
+++ /dev/null
@@ -1,161 +0,0 @@
-# Copyright 1999-2022 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=7
-
-# deal.II uses its own FindLAPACK.cmake file that calls into the system
-# FindLAPACK.cmake module and does additional internal setup. Do not remove
-# any of these modules:
-CMAKE_REMOVE_MODULES_LIST=""
-
-inherit cmake flag-o-matic
-
-DESCRIPTION="Solving partial differential equations with the finite element method"
-HOMEPAGE="https://www.dealii.org/"
-
-if [[ ${PV} = *9999* ]]; then
- inherit git-r3
- EGIT_REPO_URI="https://github.com/dealii/dealii.git"
- SRC_URI=""
-else
- SRC_URI="https://github.com/${PN}/${PN}/releases/download/v${PV}/${P}.tar.gz
- doc? (
- https://github.com/${PN}/${PN}/releases/download/v${PV}/${P}-offline_documentation.tar.gz
- )"
- KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
-fi
-
-LICENSE="LGPL-2.1+"
-SLOT="0"
-IUSE="
- adolc assimp arpack cpu_flags_x86_avx cpu_flags_x86_avx512f
- cpu_flags_x86_sse2 cuda +debug doc +examples ginkgo gmsh +gsl hdf5
- +lapack metis mpi muparser opencascade p4est petsc
- scalapack slepc +sparse static-libs sundials symengine trilinos
-"
-
-# TODO: add slepc use flag once slepc is packaged for gentoo-science
-REQUIRED_USE="
- p4est? ( mpi )
- slepc? ( petsc )
- trilinos? ( mpi )"
-
-RDEPEND="dev-libs/boost:=
- app-arch/bzip2
- sys-libs/zlib
- dev-cpp/tbb:=
- adolc? ( sci-libs/adolc )
- arpack? ( sci-libs/arpack[mpi=] )
- assimp? ( media-libs/assimp:= )
- cuda? ( dev-util/nvidia-cuda-toolkit )
- ginkgo? ( sci-libs/ginkgo )
- gmsh? ( sci-libs/gmsh )
- gsl? ( sci-libs/gsl:= )
- hdf5? ( sci-libs/hdf5[mpi=] )
- lapack? ( virtual/lapack )
- metis? (
- >=sci-libs/metis-5
- mpi? ( >=sci-libs/parmetis-4 )
- )
- mpi? ( virtual/mpi[cxx] )
- muparser? ( dev-cpp/muParser )
- opencascade? ( sci-libs/opencascade:= )
- p4est? ( sci-libs/p4est[mpi] )
- petsc? ( sci-mathematics/petsc[mpi=] )
- scalapack? ( sci-libs/scalapack )
- slepc? ( sci-mathematics/slepc[mpi=] )
- sparse? ( sci-libs/umfpack )
- sundials? ( sci-libs/sundials:= )
- symengine? ( >=sci-libs/symengine-0.4:= )
- trilinos? ( sci-libs/trilinos )"
-
-DEPEND="${RDEPEND}
- virtual/pkgconfig
- doc? ( app-doc/doxygen[dot] dev-lang/perl )"
-
-PATCHES=(
- "${FILESDIR}"/${PN}-9.1.1-no-ld-flags.patch
- "${FILESDIR}"/${P}-fix_p4est_detection.patch
-)
-
-src_configure() {
- # deal.II needs a custom build type:
- local CMAKE_BUILD_TYPE=$(usex debug DebugRelease Release)
-
- local mycmakeargs=(
- -DDEAL_II_PACKAGE_VERSION="${PV}"
- -DCMAKE_INSTALL_RPATH_USE_LINK_PATH=OFF
- -DDEAL_II_ALLOW_AUTODETECTION=OFF
- -DDEAL_II_ALLOW_PLATFORM_INTROSPECTION=OFF
- -DDEAL_II_COMPILE_EXAMPLES=OFF
- -DDEAL_II_DOCHTML_RELDIR="share/doc/${P}/html"
- -DDEAL_II_DOCREADME_RELDIR="share/doc/${P}"
- -DDEAL_II_COMPILE_EXAMPLES=OFF
- -DDEAL_II_EXAMPLES_RELDIR="share/doc/${P}/examples"
- -DDEAL_II_LIBRARY_RELDIR="$(get_libdir)"
- -DDEAL_II_SHARE_RELDIR="share/${PN}"
- -DDEAL_II_WITH_ZLIB=ON
- -DDEAL_II_WITH_ADOLC="$(usex adolc)"
- -DDEAL_II_WITH_ASSIMP="$(usex assimp)"
- -DDEAL_II_WITH_ARPACK="$(usex arpack)"
- -DDEAL_II_WITH_CUDA="$(usex cuda)"
- -DDEAL_II_WITH_GINKGO="$(usex ginkgo)"
- -DDEAL_II_COMPONENT_DOCUMENTATION="$(usex doc)"
- -DDEAL_II_COMPONENT_EXAMPLES="$(usex examples)"
- -DDEAL_II_WITH_GMSH="$(usex gmsh)"
- -DDEAL_II_WITH_GSL="$(usex gsl)"
- -DDEAL_II_WITH_HDF5="$(usex hdf5)"
- -DDEAL_II_WITH_LAPACK="$(usex lapack)"
- -DDEAL_II_WITH_METIS="$(usex metis)"
- -DDEAL_II_WITH_MPI="$(usex mpi)"
- -DDEAL_II_WITH_MUPARSER="$(usex muparser)"
- -DDEAL_II_WITH_OPENCASCADE="$(usex opencascade)"
- -DDEAL_II_WITH_P4EST="$(usex p4est)"
- -DDEAL_II_WITH_PETSC="$(usex petsc)"
- -DDEAL_II_WITH_SCALAPACK="$(usex scalapack)"
- -DDEAL_II_WITH_SLEPC="$(usex slepc)"
- -DDEAL_II_WITH_SUNDIALS="$(usex sundials)"
- -DDEAL_II_WITH_SYMENGINE="$(usex symengine)"
- -DDEAL_II_WITH_UMFPACK="$(usex sparse)"
- -DBUILD_SHARED_LIBS="$(usex !static-libs)"
- -DDEAL_II_PREFER_STATIC_LIBS="$(usex static-libs)"
- -DDEAL_II_WITH_TBB=ON
- -DDEAL_II_WITH_TRILINOS="$(usex trilinos)"
- )
-
- use opencascade && mycmakeargs+=(
- -DCMAKE_PREFIX_PATH="/usr/$(get_libdir)/opencascade"
- )
-
- # Do a little dance for purely cosmetic QA reasons. The build system
- # does query for the highest instruction set first and skips the other
- # variables if a "higher" variant is set
- if use cpu_flags_x86_avx512f; then
- mycmakeargs+=( -DDEAL_II_HAVE_AVX512=yes )
- append-cxxflags "-mavx512f"
- elif use cpu_flags_x86_avx; then
- mycmakeargs+=( -DDEAL_II_HAVE_AVX=yes )
- append-cxxflags "-mavx2"
- elif use cpu_flags_x86_avx; then
- mycmakeargs+=( -DDEAL_II_HAVE_SSE2=yes )
- append-cxxflags "-msse2"
- fi
-
- cmake_src_configure
-}
-
-src_install() {
- if use doc && [[ ${PV} != *9999* ]]; then
- # copy missing images to the build directory:
- cp -r "${WORKDIR}"/doc/doxygen/deal.II/images \
- "${BUILD_DIR}"/doc/doxygen/deal.II || die
- # replace links:
- sed -i \
- 's#"http://www.dealii.org/images/steps/developer/\(step-.*\)"#"images/\1"#g' \
- "${BUILD_DIR}"/doc/doxygen/deal.II/step_*.html || die "sed failed"
- fi
- cmake_src_install
-
- # decompress the installed example sources:
- use examples && docompress -x /usr/share/doc/${PF}/examples
-}
diff --git a/sci-libs/dealii/dealii-9.4.0.ebuild b/sci-libs/dealii/dealii-9.4.0-r1.ebuild
index b493d369767a..23dd968667ef 100644
--- a/sci-libs/dealii/dealii-9.4.0.ebuild
+++ b/sci-libs/dealii/dealii-9.4.0-r1.ebuild
@@ -8,7 +8,7 @@ EAPI=8
# any of these modules:
CMAKE_REMOVE_MODULES_LIST=""
-inherit cmake flag-o-matic
+inherit cmake flag-o-matic verify-sig
DESCRIPTION="Solving partial differential equations with the finite element method"
HOMEPAGE="https://www.dealii.org/"
@@ -19,8 +19,10 @@ if [[ ${PV} = *9999* ]]; then
SRC_URI=""
else
SRC_URI="https://github.com/${PN}/${PN}/releases/download/v${PV}/${P}.tar.gz
+ verify-sig? ( https://github.com/${PN}/${PN}/releases/download/v${PV}/${P}.tar.gz.asc )
doc? (
https://github.com/${PN}/${PN}/releases/download/v${PV}/${P}-offline_documentation.tar.gz
+ verify-sig? ( https://github.com/${PN}/${PN}/releases/download/v${PV}/${P}-offline_documentation.tar.gz.asc )
)"
KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
fi
@@ -75,10 +77,15 @@ DEPEND="${RDEPEND}
virtual/pkgconfig
doc? ( app-doc/doxygen[dot] dev-lang/perl )"
+BDEPEND="
+ verify-sig? ( sec-keys/openpgp-keys-dealii )"
+
PATCHES=(
"${FILESDIR}"/${PN}-9.1.1-no-ld-flags.patch
)
+VERIFY_SIG_OPENPGP_KEY_PATH="${BROOT}/usr/share/openpgp-keys/dealii.asc"
+
src_configure() {
# deal.II needs a custom build type:
local CMAKE_BUILD_TYPE=$(usex debug DebugRelease Release)
diff --git a/sci-libs/dealii/dealii-9.4.1.ebuild b/sci-libs/dealii/dealii-9.4.1-r1.ebuild
index b493d369767a..23dd968667ef 100644
--- a/sci-libs/dealii/dealii-9.4.1.ebuild
+++ b/sci-libs/dealii/dealii-9.4.1-r1.ebuild
@@ -8,7 +8,7 @@ EAPI=8
# any of these modules:
CMAKE_REMOVE_MODULES_LIST=""
-inherit cmake flag-o-matic
+inherit cmake flag-o-matic verify-sig
DESCRIPTION="Solving partial differential equations with the finite element method"
HOMEPAGE="https://www.dealii.org/"
@@ -19,8 +19,10 @@ if [[ ${PV} = *9999* ]]; then
SRC_URI=""
else
SRC_URI="https://github.com/${PN}/${PN}/releases/download/v${PV}/${P}.tar.gz
+ verify-sig? ( https://github.com/${PN}/${PN}/releases/download/v${PV}/${P}.tar.gz.asc )
doc? (
https://github.com/${PN}/${PN}/releases/download/v${PV}/${P}-offline_documentation.tar.gz
+ verify-sig? ( https://github.com/${PN}/${PN}/releases/download/v${PV}/${P}-offline_documentation.tar.gz.asc )
)"
KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
fi
@@ -75,10 +77,15 @@ DEPEND="${RDEPEND}
virtual/pkgconfig
doc? ( app-doc/doxygen[dot] dev-lang/perl )"
+BDEPEND="
+ verify-sig? ( sec-keys/openpgp-keys-dealii )"
+
PATCHES=(
"${FILESDIR}"/${PN}-9.1.1-no-ld-flags.patch
)
+VERIFY_SIG_OPENPGP_KEY_PATH="${BROOT}/usr/share/openpgp-keys/dealii.asc"
+
src_configure() {
# deal.II needs a custom build type:
local CMAKE_BUILD_TYPE=$(usex debug DebugRelease Release)
diff --git a/sci-libs/dealii/files/dealii-9.1.1-fix_boost_177.patch b/sci-libs/dealii/files/dealii-9.1.1-fix_boost_177.patch
deleted file mode 100644
index b040e240ad61..000000000000
--- a/sci-libs/dealii/files/dealii-9.1.1-fix_boost_177.patch
+++ /dev/null
@@ -1,12 +0,0 @@
-diff --git a/include/deal.II/numerics/rtree.h b/include/deal.II/numerics/rtree.h
-index 1b9d04d..1e1bfd2 100644
---- a/include/deal.II/numerics/rtree.h
-+++ b/include/deal.II/numerics/rtree.h
-@@ -26,6 +26,7 @@
- #include <deal.II/boost_adaptors/segment.h>
-
- DEAL_II_DISABLE_EXTRA_DIAGNOSTICS
-+#include <boost/geometry/algorithms/distance.hpp>
- #include <boost/geometry/index/rtree.hpp>
- #include <boost/geometry/strategies/strategies.hpp>
- DEAL_II_ENABLE_EXTRA_DIAGNOSTICS
diff --git a/sci-libs/dealii/files/dealii-9.3.3-fix_p4est_detection.patch b/sci-libs/dealii/files/dealii-9.3.3-fix_p4est_detection.patch
deleted file mode 100644
index 72d66d7ecb4d..000000000000
--- a/sci-libs/dealii/files/dealii-9.3.3-fix_p4est_detection.patch
+++ /dev/null
@@ -1,41 +0,0 @@
-From 354cdd6730ac1cc19cbf99e663e7ca280a9b62dc Mon Sep 17 00:00:00 2001
-From: Matthias Maier <tamiko@43-1.org>
-Date: Sun, 13 Feb 2022 19:03:49 -0600
-Subject: [PATCH] CMake: Adjust MPI and ZLIB support query for p4est version
- 2.8
-
----
- cmake/modules/FindP4EST.cmake | 10 ++++++++--
- 1 file changed, 8 insertions(+), 2 deletions(-)
-
-diff --git a/cmake/modules/FindP4EST.cmake b/cmake/modules/FindP4EST.cmake
-index a91ef26876..d32cadf281 100644
---- a/cmake/modules/FindP4EST.cmake
-+++ b/cmake/modules/FindP4EST.cmake
-@@ -114,7 +114,13 @@ IF(EXISTS ${P4EST_INCLUDE_DIR}/p4est_config.h)
- FILE(STRINGS "${P4EST_INCLUDE_DIR}/p4est_config.h" P4EST_MPI_STRING
- REGEX "#define.*P4EST_MPI 1")
- IF("${P4EST_MPI_STRING}" STREQUAL "")
-- SET(P4EST_WITH_MPI FALSE)
-+ FILE(STRINGS "${P4EST_INCLUDE_DIR}/p4est_config.h" P4EST_MPI_STRING
-+ REGEX "#define.*P4EST_ENABLE_MPI")
-+ IF("${P4EST_MPI_STRING}" STREQUAL "")
-+ SET(P4EST_WITH_MPI FALSE)
-+ ELSE()
-+ SET(P4EST_WITH_MPI TRUE)
-+ ENDIF()
- ELSE()
- SET(P4EST_WITH_MPI TRUE)
- ENDIF()
-@@ -123,7 +129,7 @@ IF(EXISTS ${P4EST_INCLUDE_DIR}/p4est_config.h)
- # Is p4est built against zlib?
- #
- FILE(STRINGS "${P4EST_INCLUDE_DIR}/p4est_config.h" P4EST_ZLIB_STRING
-- REGEX "#define.*P4EST_HAVE_ZLIB 1")
-+ REGEX "^#define.*P4EST_HAVE_ZLIB")
- IF("${P4EST_ZLIB_STRING}" STREQUAL "")
- SET(P4EST_WITH_ZLIB FALSE)
- ELSE()
---
-2.34.1
-