diff options
Diffstat (limited to 'sci-mathematics')
-rw-r--r-- | sci-mathematics/Manifest.gz | bin | 18815 -> 18814 bytes | |||
-rw-r--r-- | sci-mathematics/cgal/Manifest | 3 | ||||
-rw-r--r-- | sci-mathematics/cgal/cgal-5.5.2.ebuild | 60 | ||||
-rw-r--r-- | sci-mathematics/petsc/Manifest | 2 | ||||
-rw-r--r-- | sci-mathematics/petsc/petsc-3.19.2.ebuild | 236 | ||||
-rw-r--r-- | sci-mathematics/slepc/Manifest | 3 | ||||
-rw-r--r-- | sci-mathematics/slepc/slepc-3.19.1.ebuild | 125 |
7 files changed, 429 insertions, 0 deletions
diff --git a/sci-mathematics/Manifest.gz b/sci-mathematics/Manifest.gz Binary files differindex 338b1694d7cc..dd89e3fd61e7 100644 --- a/sci-mathematics/Manifest.gz +++ b/sci-mathematics/Manifest.gz diff --git a/sci-mathematics/cgal/Manifest b/sci-mathematics/cgal/Manifest index 77ce84262219..b2f07799964a 100644 --- a/sci-mathematics/cgal/Manifest +++ b/sci-mathematics/cgal/Manifest @@ -1,5 +1,8 @@ AUX cgal-4.11.1-fix-buildsystem.patch 840 BLAKE2B e1179b2721e52b2edf305e2cb434a914f0b46b6aa694fd1766a8622b65ed8e8209a06bc134bfab97f07b789af45f74605fc7ed2b6c45ed5f5574a0a801c479dd SHA512 5e6315dfa64c58ea88d473b3513ec0817e6d212c325dd70b523d2dca2817fed2cdb0791686b7353c410e42ff8b1ee228a045bd6f002b591672066b33ce6f09ad DIST CGAL-5.5-doc_html.tar.xz 53145672 BLAKE2B 7a575f09eed2fd97f3e68f37428d4ab41c267a6e4c158e653a8c2b5a17f2c56a31b64937fa161d3f256b473a1e617acbce2f3bfb71c2e810b8b0335b57a8b54c SHA512 41e16b44b93664ddd5185358165cce99f149fa33bdb308ce7230550ee79e3603c24df5b8d4f67de324ebf7e8a8c1e343e6d76341464cedd9d9af50f5d512af3b +DIST CGAL-5.5.2-doc_html.tar.xz 53155520 BLAKE2B 349f4dd2a5821412a614c6aa6c20bc3da24f23341b286d0d4eff0546a5decb9e4d13a8b53cd41a4431a710e2dfa54594997d4075bed548538b5590b1d375a363 SHA512 7b98462e32d29553bdc11e435ba086c81a9cf7506b9ad8d118de8cb8d689d3647c7956164e81b8b02768990f7cc0661e6cdc1eea0ac01d55a87b95e4c9248791 +DIST CGAL-5.5.2.tar.xz 24159628 BLAKE2B 23417651deba4fa1587ee3082483672f7f8864621ceb8ef273d2ab0490bb7fe0dc96358393d39d33b14c50c5bde4d2138b8982fa3907a049151d12e7cbc3c4f8 SHA512 2842b027f68d98be5b747bbf1c5fa9310b82247520f1dc90b7612311a77aad83f519805a366317c4d50ca440dc604be6b7ca88160add1ce2b8006f0e561363eb DIST CGAL-5.5.tar.xz 24156768 BLAKE2B e5f02cd082abfa8443e65430ed366cfdc3736c6a7af37284969ddd558ede1aa6c881d6928c65708504fd58f68ea01f56aa0749267d6dc83fd54f0b28e8c01374 SHA512 7fa6bf6c046727a9e0bce7cbde34cbe85979127a1ad0904f2865be83a80e89fa9af5118e5647572414f8096d29ecc808ee471d4bd3e7ecd41338be649b549290 +EBUILD cgal-5.5.2.ebuild 1231 BLAKE2B 31d0dd3f578e5d720d28139e5f7dc872689fcb63e7e669b097f00cc7f0ab821f16cdcedaf26fc2f47d9dbdbfb71160b81ac80997be567248ba791beb79487ed1 SHA512 160036c8f6cc4be48240d72a9cdb5658f08f5edb462a4ad9446747a9750e5ddeb011161548faf008db0feeebf506572d261f126eeeafd452d30434b3101b0187 EBUILD cgal-5.5.ebuild 1230 BLAKE2B bab66db74651bc5798716ce9c0e3f3c8b46d53e446e2d6aa10ca1d45d0d008fd7be07363374c103c9e9a913712d02495fa9324b70ca101a81867b6718f29a411 SHA512 4eacfc73204574fb5e4cf72716e45419476f29be99020c69ba2bcb5a40bf9ce5aed1383ff23fe4e5351d29c8268634e3f31c1d687858658bc396903bc2879150 MISC metadata.xml 1118 BLAKE2B ed180a3128a37bc151ce89a0edcc076b09449a43e9ce7633ac0c0343b20cdd585cf6b68dc92262730d8379b4eb0d4b26feba90327384f2e4546fba27336d96ca SHA512 c407490521df2908343dbc870684938dfe71e5f4a072f016361db9f08ebb598540c69a704ce97cf803b4e23846a18c259fc208f286f0d11d8acbadd32182142c diff --git a/sci-mathematics/cgal/cgal-5.5.2.ebuild b/sci-mathematics/cgal/cgal-5.5.2.ebuild new file mode 100644 index 000000000000..d1309dbac6e5 --- /dev/null +++ b/sci-mathematics/cgal/cgal-5.5.2.ebuild @@ -0,0 +1,60 @@ +# Copyright 1999-2023 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=8 + +# Modules provided by dev-cpp/eigen +CMAKE_REMOVE_MODULES_LIST=( FindEigen3 ) +inherit cmake + +MY_P=CGAL-${PV} +DESCRIPTION="C++ library for geometric algorithms and data structures" +HOMEPAGE="https://www.cgal.org/" +SRC_URI=" + https://github.com/CGAL/cgal/releases/download/v${PV}/${MY_P}.tar.xz + doc? ( https://github.com/CGAL/cgal/releases/download/v${PV}/${MY_P}-doc_html.tar.xz )" +S="${WORKDIR}/${MY_P}" + +LICENSE="LGPL-3 GPL-3 Boost-1.0" +SLOT="0/14" +KEYWORDS="~amd64 ~arm64 ~x86 ~amd64-linux ~x86-linux" +IUSE="doc examples" + +RDEPEND=" + dev-cpp/eigen + dev-libs/boost:= + dev-libs/gmp:=[cxx] + dev-libs/mpfr:= + sys-libs/zlib + x11-libs/libX11:= + virtual/glu:= + virtual/opengl:= +" +DEPEND="${RDEPEND}" +BDEPEND=" + app-arch/xz-utils + virtual/pkgconfig +" + +PATCHES=( + "${FILESDIR}"/${PN}-4.11.1-fix-buildsystem.patch +) + +src_configure() { + local mycmakeargs=( + -DCGAL_INSTALL_LIB_DIR="$(get_libdir)" + -DCGAL_INSTALL_CMAKE_DIR="$(get_libdir)/cmake/CGAL" + ) + + cmake_src_configure +} + +src_install() { + use doc && local HTML_DOCS=( "${WORKDIR}"/doc_html/. ) + + cmake_src_install + + if use examples; then + dodoc -r examples demo + fi +} diff --git a/sci-mathematics/petsc/Manifest b/sci-mathematics/petsc/Manifest index 6670a9d25737..20087f1d3a28 100644 --- a/sci-mathematics/petsc/Manifest +++ b/sci-mathematics/petsc/Manifest @@ -5,8 +5,10 @@ DIST petsc-3.16.0.tar.gz 16748960 BLAKE2B 87f9fdb79a9c44e5f476fa4746ad0cbe72f3ed DIST petsc-3.17.1.tar.gz 17082265 BLAKE2B de1bfe45f93e18e32181499e59912df9225c8e24d75f52e641e552fd43e4d5be48d549d284365b173aa93e51603f5b7740eaac0557ff8c7c96b370f4683257f6 SHA512 8c81cc148b1a899a55e54a013d61519ec7b44f98f7ae30c3f8d0e83ba285b23f4b4d9e2cd483c531d337bc41887e4079b727ba73676b1b653910140291e93575 DIST petsc-3.18.2.tar.gz 18409507 BLAKE2B 999d4fc80dedb5f9ce58333b6052b15ff499e3d5e4fee3e37639f5e3d2c5e86b514290d01e75b71795467436254d2cb8b05dac3d6252c80db898010bbed95544 SHA512 a8e9757144a20d61c004f54615821df7f9dbd920af71fea4674eb0fd1bf9f0b50dbc5c89aae285fef35a23daf67ba9647e479a6e92dbcd26e53fd8302735a47b DIST petsc-3.19.1.tar.gz 16659061 BLAKE2B 8c7b22e5f97756261a5d0e8b707670d55db53e209fd1e116a2adb517d42f5e8bd5ecc911c9e967b88a8dc60a2d872c1d7a279539c65064884b4cfbe856434ad3 SHA512 5b9b71599a95e2d82d18d5313c424a08eead0c10f27f40c82159839ef0fa8aeda88ddea693a12d58b8ac29a41c4138e8188a3c91d6af540196ee3a977cf9539d +DIST petsc-3.19.2.tar.gz 16627765 BLAKE2B 1267db717989c3819f32ac6a62642054af2ac49d9e9276ffd4f0846d73e31ae4a5dcca4ad794b91cdb29463b7ec68040baa4e1cad99aaef8ab910ff7b64d7478 SHA512 f8feeb66fa8bd2406227be0e2cc2946485238362270d40e3f07dc89491177751f6bf680f51b70696bc30b677624c0e525c3fa9784eabdeb2337697ec56f63fc1 EBUILD petsc-3.16.0-r1.ebuild 5427 BLAKE2B e18f53897dc04fc0422b3c07963256ceacaf9d10a66070cb0bd4bceea601adbdb37dc692aa3db66369665dbd709cca10294f012fe97cef2714e9db47cb40b210 SHA512 672b56ca4832058fa31c2c6a7f0c1ca08c921ea1e2feebecf29002bb5161f4377f05a4d63c10a60db4736224a2ec97f97a0d57d87e472febbbe8af7f22dd23ce EBUILD petsc-3.17.1-r1.ebuild 5403 BLAKE2B 3b15db9ef72787054001d73eb06cf60cf1438dc5b8373d6d417fb9b0917b45b81875434051887b55e11760d6889d2d8e1a765c6a98107816757bb6dcbe21ab28 SHA512 dae4bfc503a07b1c5df7d68cd96f95fbd986231a4c93c2ef89e0c5e70befe4e52e0b3228dee7223d9aa9609f6ceab3acf315f7dd85e6418a8693897d0e7d51ed EBUILD petsc-3.18.2.ebuild 7335 BLAKE2B 30b20337965d0fe0c3513105c486c9db323de90ed40a69c094db8b7fd34e446f6a9ce50631ef2d1f4d23931416b252febbb67b312f5e106ab29278a16dc3dd6c SHA512 0c5f0ba34b2662438c6e3f9dcb1a5b92e3c56e7dee6a2903159a5ddc1693da195704e2c4ce514601a337e6e093094daf07fe0ffa233fafe17b53f62c52e55219 EBUILD petsc-3.19.1.ebuild 7335 BLAKE2B 30b20337965d0fe0c3513105c486c9db323de90ed40a69c094db8b7fd34e446f6a9ce50631ef2d1f4d23931416b252febbb67b312f5e106ab29278a16dc3dd6c SHA512 0c5f0ba34b2662438c6e3f9dcb1a5b92e3c56e7dee6a2903159a5ddc1693da195704e2c4ce514601a337e6e093094daf07fe0ffa233fafe17b53f62c52e55219 +EBUILD petsc-3.19.2.ebuild 7335 BLAKE2B 30b20337965d0fe0c3513105c486c9db323de90ed40a69c094db8b7fd34e446f6a9ce50631ef2d1f4d23931416b252febbb67b312f5e106ab29278a16dc3dd6c SHA512 0c5f0ba34b2662438c6e3f9dcb1a5b92e3c56e7dee6a2903159a5ddc1693da195704e2c4ce514601a337e6e093094daf07fe0ffa233fafe17b53f62c52e55219 MISC metadata.xml 1234 BLAKE2B 15951140c7123ce11ae325ab3491822abf4143b053c62e3b47d192785a9fcf8ea3a1e30c68023bdd4eaecafd312aec1b519c2bf4a2a6fc07ae7b88f2266ea4ee SHA512 84fbcacb317baa8fbc71c143d42ae9e4ea00dffbe9fbd1b113065d6d493d52461737c33cdb36e39a558d5aafa58ea3fc7078f3af8605fd7c8733afe6469390e4 diff --git a/sci-mathematics/petsc/petsc-3.19.2.ebuild b/sci-mathematics/petsc/petsc-3.19.2.ebuild new file mode 100644 index 000000000000..f57281175844 --- /dev/null +++ b/sci-mathematics/petsc/petsc-3.19.2.ebuild @@ -0,0 +1,236 @@ +# Copyright 1999-2023 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=8 + +PYTHON_COMPAT=( python3_{9..11} pypy3 ) + +inherit flag-o-matic fortran-2 python-any-r1 toolchain-funcs + +DESCRIPTION="Portable, Extensible Toolkit for Scientific Computation" +HOMEPAGE="https://www.mcs.anl.gov/petsc" +SRC_URI="http://ftp.mcs.anl.gov/pub/petsc/release-snapshots/${P}.tar.gz" + +LICENSE="BSD-2" +SLOT="0" +KEYWORDS="~amd64 ~x86" +IUSE="afterimage boost complex-scalars debug +examples fftw +fortran hdf5 hypre int64 mpi metis mumps scotch superlu threads X" + +# readd sparse when suitesparse-5.6.0 is in tree +# sparse? ( >=sci-libs/suitesparse-5.6.0 >=sci-libs/cholmod-1.7.0 ) +# $(use_with sparse suitesparse) \ +RDEPEND=" + virtual/blas + virtual/lapack + + afterimage? ( media-libs/libafterimage ) + boost? ( dev-libs/boost ) + fftw? ( sci-libs/fftw:3.0[mpi?] ) + hdf5? ( sci-libs/hdf5[mpi?] ) + hypre? ( >=sci-libs/hypre-2.18.0[int64?,mpi?] ) + metis? ( >=sci-libs/parmetis-4 ) + mpi? ( virtual/mpi[fortran?] ) + mumps? ( sci-libs/mumps[mpi?] sci-libs/scalapack ) + scotch? ( sci-libs/scotch[int64?,mpi?] ) + superlu? ( >=sci-libs/superlu-5 ) + X? ( x11-libs/libX11 ) +" +DEPEND=" + ${RDEPEND} + ${PYTHON_DEPS} +" +BDEPEND=" + dev-util/cmake + sys-apps/which + virtual/pkgconfig +" + +# hypre and superlu curretly exclude each other due to missing linking to hypre +# if both are enabled +REQUIRED_USE=" + afterimage? ( X ) + complex-scalars? ( !hypre !superlu ) + fftw? ( mpi ) + hdf5? ( mpi ) + hypre? ( mpi !superlu ) + mumps? ( mpi scotch ) + scotch? ( mpi ) + superlu? ( !hypre ) +" +PATCHES=( + "${FILESDIR}/${PN}-3.7.0-disable-rpath.patch" + "${FILESDIR}"/${PN}-3.16.0-fix_sandbox_violation.patch +) + +# petsc uses --with-blah=1 and --with-blah=0 to en/disable options +petsc_enable() { + use "$1" && echo "--with-${2:-$1}=1" || echo "--with-${2:-$1}=0" +} +# add external library: +# petsc_with use_flag libname libdir +# petsc_with use_flag libname include linking_libs +petsc_with() { + local myuse p=${2:-${1}} + if use ${1}; then + myuse="--with-${p}=1" + if [[ $# -ge 4 ]]; then + myuse="${myuse} --with-${p}-include=${EPREFIX}${3}" + shift 3 + myuse="${myuse} --with-${p}-lib=$@" + else + myuse="${myuse} --with-${p}-dir=${EPREFIX}${3:-/usr}" + fi + else + myuse="--with-${p}=0" + fi + echo ${myuse} +} + +# select between configure options depending on use flag +petsc_select() { + use "$1" && echo "--with-$2=$3" || echo "--with-$2=$4" +} + +src_configure() { + # bug 548498 + # PETSc runs mpi processes during configure that result in a sandbox + # violation by trying to open /proc/mtrr rw. This is not easy to + # mitigate because it happens in libpciaccess.so called by libhwloc.so, + # which is used by libmpi.so. + addpredict /proc/mtrr + # if mpi is built with knem support it needs /dev/knem too + addpredict /dev/knem + + # configureMPITypes with openmpi-2* insists on accessing the scaling + # governor rw. + addpredict /sys/devices/system/cpu/ + + # bug 771711 + # configureMPIEXEC and configureMPITypes access /dev/nvidiactl + addpredict /dev/nvidiactl + + # bug 810841 + addpredict /dev/kfd + + local myopt + + use debug && myopt="debug" || myopt="opt" + + # environmental variables expected by petsc during build + + export PETSC_DIR="${S}" + export PETSC_ARCH="linux-gnu-c-${myopt}" + + if use debug; then + strip-flags + filter-flags -O* + fi + + tc-export AR RANLIB + + # C Support on CXX builds is enabled if possible i.e. when not using + # complex scalars (no complex type for both available at the same time) + + econf \ + scrollOutput=1 \ + AR="${AR}" \ + CFLAGS="${CFLAGS} -fPIC" \ + CPPFLAGS="${CPPFLAGS}" \ + CXXFLAGS="${CXXFLAGS} -fPIC" \ + CXXOPTFLAGS="${CXXFLAGS} -fPIC" \ + FCFLAGS="${FCFLAGS} -fPIC" \ + FFLAGS="${FFLAGS} -fPIC" \ + LDFLAGS="${LDFLAGS}" \ + MAKEFLAGS="${MAKEFLAGS}" \ + RANLIB="${RANLIB}" \ + --prefix="${EPREFIX}/usr/$(get_libdir)/petscdir/" \ + --with-blas-lapack-lib="$($(tc-getPKG_CONFIG) --libs blas lapack)" \ + --with-cmake:BOOL=1 \ + --with-gnu-compilers \ + --with-imagemagick=0 \ + --with-petsc-arch="${PETSC_ARCH}" \ + --with-precision=double \ + --with-python=0 \ + --with-shared-libraries \ + --with-single-library \ + --with-windows-graphics=0 \ + $(petsc_enable debug debugging) \ + $(petsc_enable fortran) \ + $(petsc_enable mpi) \ + $(petsc_enable mpi mpi-compilers) \ + $(petsc_enable threads pthread) \ + $(petsc_select complex-scalars scalar-type complex real) \ + $(petsc_select mpi cc mpicc $(tc-getCC)) \ + $(petsc_select mpi cxx mpicxx $(tc-getCXX)) \ + $(petsc_with afterimage afterimage /usr/include/libAfterImage -lAfterImage) \ + $(petsc_with hypre hypre /usr/include/hypre -lHYPRE) \ + $(petsc_with superlu superlu /usr/include/superlu -lsuperlu) \ + $(petsc_with scotch ptscotch /usr/include/scotch [-lptesmumps,-lptscotch,-lptscotcherr,-lscotch,-lscotcherr]) \ + $(petsc_with mumps scalapack /usr/include/scalapack -lscalapack) \ + $(petsc_with mumps mumps /usr/include [-lcmumps,-ldmumps,-lsmumps,-lzmumps,-lmumps_common,-lpord]) \ + $(use fortran && echo "$(petsc_select mpi fc mpif77 $(tc-getF77))") \ + $(use int64 && echo "--with-index-size=64") \ + $(use_with boost) \ + $(use_with fftw) \ + $(use_with hdf5) \ + $(use_with X x) \ + $(use_with X x11) +} + +src_install() { + emake DESTDIR="${ED}" install + + # + # Clean up the mess: + # + + # put all include directories under a proper subdirectory + mkdir "${ED}"/usr/include || die "mkdir failed (include)" + mv "${ED}"/usr/{$(get_libdir)/petscdir/include,include/petsc} || die "mv failed (include)" + + # put libraries and pkconfig file into proper place + mv "${ED}"/usr/$(get_libdir)/petscdir/lib/{libpetsc*,pkgconfig} \ + "${ED}/usr/$(get_libdir)" || die "mv failed (lib)" + + # move share to proper location + mv "${ED}"/usr/{$(get_libdir)/petscdir/share,share} || die "mv failed (share)" + + # fix pc files: + sed -i \ + -e 's#include$#include/petsc#' \ + -e "s#lib\$#$(get_libdir)#" \ + -e "s#^prefix=.*petscdir\$#prefix=${EPREFIX}/usr#" \ + "${ED}"/usr/$(get_libdir)/pkgconfig/*.pc || die "sed failed (pkgconfig)" + + # recreate a "valid" petscdir: + for i in "${ED}"/usr/$(get_libdir)/*; do + [ $(basename $i) = petscdir ] && continue + ln -s "${EPREFIX}/usr/$(get_libdir)/$(basename $i)" \ + "${ED}/usr/$(get_libdir)/petscdir/lib/$(basename $i)" || die "ln failed (petscdir)" + done + ln -s "${EPREFIX}"/usr/include/petsc/ \ + "${ED}/usr/$(get_libdir)/petscdir/include" || die "ln failed (petscdir)" + mkdir "${ED}/usr/$(get_libdir)/petscdir/share" || die "mkdir fialed (petscdir)" + ln -s "${EPREFIX}"/usr/share/petsc/ \ + "${ED}/usr/$(get_libdir)/petscdir/share/petsc" || die "ln failed (petscdir)" + + # automatically symlink petsc matlab modules: + mkdir -p "${ED}"/usr/share/octave/site/m/ + ln -s "${EPREFIX}"/usr/share/petsc/matlab "${ED}"/usr/share/octave/site/m/petsc || die "ln failed (matlab)" + + if use examples; then + mkdir -p "${ED}"/usr/share/doc/${PF} || die "mkdir failed (examples)" + mv "${ED}"/usr/share/petsc/examples "${ED}"/usr/share/doc/${PF} || die "mv failed (examples)" + ln -s "${EPREFIX}"/usr/share/doc/${PF}/examples "${ED}"/usr/share/petsc/examples || die "ln failed (examples)" + docompress -x /usr/share/doc/${PF}/examples + else + rm -r "${ED}"/usr/share/petsc/examples || die "rm failed (examples)" + fi + + # add PETSC_DIR to environmental variables + cat >> 99petsc <<- EOF + PETSC_DIR=${EPREFIX}/usr/$(get_libdir)/petscdir + EOF + doenvd 99petsc +} diff --git a/sci-mathematics/slepc/Manifest b/sci-mathematics/slepc/Manifest index 336c86b8d6e4..212ed4978e62 100644 --- a/sci-mathematics/slepc/Manifest +++ b/sci-mathematics/slepc/Manifest @@ -2,9 +2,12 @@ DIST slepc-3.16.0.tar.gz 5486237 BLAKE2B 28f45036ba7e6aa2b227c6f25e2c8edf7fc6914 DIST slepc-3.17.1.tar.gz 5450177 BLAKE2B ec4f597085a176a010797d599779cc4532e52996105bb76f755073876ebb81026c580cb5759a03bda58cb2de2767b1dcdb01ff0d946f218117edb2a7a6557414 SHA512 5429aa7516ec0b2fee8158f9317634faf1c963aa60237be81a0392d5f2fa9f531db59b4a9ad04e266d808befdbd71b5a30259b4abc639a1da2defffd74acd35b DIST slepc-3.18.1.tar.gz 6013016 BLAKE2B 1526b7e6e0f0387a8410cfcbee9bc62f35f930420b86bcb58146b16f73b28b349c6aad0ef59e02a635c374a0a8b6eb16ac50b7bcb79ce6c06a3de56029db551a SHA512 d366844c492be6bf77edabdbe0d61672ead45605fc299c25ac24bf14d9d15bc107bb62f0d08aa403a5f269a2b12ae4d7cd3768958d792812e6c1924b93a27be4 DIST slepc-3.19.0.tar.gz 1803822 BLAKE2B 742cc773e649d46ff8513263ef53fe5d62f6cac537d5444eeeb494d0816d496a5c0c2f260615aa8a82ebdc983877302acf7d0c88f01bd4bea66246149dabac13 SHA512 edb8c589c162766a7b4a81b484356f2a5b2f70a7c90c87e39efda1a00f6fe544d7ae644e8903059b7dab990c1fa2129cd5d1c7dbb759511483ab43d3d691419c +DIST slepc-3.19.1.tar.gz 1804559 BLAKE2B e70d0801f84ee62409efd53b56cf57405017ee02cbc0c5484ca2aaf550f97ce8be665a360d774b69b8315dc1cdd0404535a316b6d744c7d0a6f87129c93dcf4d SHA512 a0bcbdb917e0a9606ba2bd00ee04e3016e9d5feb7e6ced069c1c57452a8661cdb57fa0d81004340367796cec91b7f9280339c7c0dfaaa0e5f839d91194dd43cb DIST slepc-with-docs-3.19.0.tar.gz 6320650 BLAKE2B 32d383d7ddfe6cf21755fcae768517830076d38ef4c0d844c0a4270194de541a32849883d951f1a47d98491be05866b415de3ca6148b9d9cdf0bfc5e6487234e SHA512 48695c8449a323755a5d8bd3e88560e72ef82a48d0d1150e2a751a323db02836b76666bbaea3bb44c9a79b900a93337f6ced12aba6cfd939a7c1edae49f17e71 +DIST slepc-with-docs-3.19.1.tar.gz 6325794 BLAKE2B 45f33632b2096df5b25a910da33307bf1b3023949068cc84dda091a6fd142a8dc155c4d81e500dde05c3e852f87165b9cf72cdd1844a5fa7da554fe5a7740fea SHA512 5d886f05e6e21f7344391aacb892ae44cc5ac6f2144e9738fa318aab3724c010e51c968f242b5a19988e362f6f5a9d28a57fe4a4749a18be928ad458b3583936 EBUILD slepc-3.16.0.ebuild 1583 BLAKE2B 2e08bfc60fa6bc3814bfcdb421cb333bd8a88dc58decdc59d1738fecf34be24532187e2ff19a6dbdfd9d41249ffaa9209a2af6da509f1f39c1b4a404f07f5243 SHA512 b4505b508c7ccc8af5971a8f52f0ca57ebd0c1b5a75caf318ec1c7dc68f5033f311b4c313b926bf9fee7900267c329a38c5df955dd3651c0cadc138db4248d43 EBUILD slepc-3.17.1.ebuild 1530 BLAKE2B 8e7e0a4335127366bc1eec5141b69b6a1ca16ddda6f4275d4a9cf9001c62b3919675857e4cff982c97dafb4e546e1c6ec93ffdc1ae74d92a20741722fb23dd3c SHA512 e5f27c5fc8870660f1fbbdf9bb2d90f84236fc82636e3c41ebcc062e054c3074828442e029299957cbe4d69c69a9e7f644352571f5a18ec32a4d59270c9e27c7 EBUILD slepc-3.18.1.ebuild 3421 BLAKE2B a56320125d91f06bf5fc026ea002f046bf005b7716a9a0c8dbac0184dce26dda81af8e97c4592591d5ff081de15bd8b4ec2abe29516824d9be0531e946b622e8 SHA512 5f1a9ebb22d13b58e86a7cbcaf23000947c588b3ab648d41e067da7b3d375a0ebd8e060051314af1a4e9a573286b86bba9b3b29a1d5c19ce366529e085f1765a EBUILD slepc-3.19.0.ebuild 3607 BLAKE2B 618f42170b13aacda3bdf67b34c2ddbe2757a63fd1ff90b2e3c6ce22163e8b2a13b3478309c0d0743c88124ad9fee31624688ac286a289d658b781c9950b4f78 SHA512 db16bbd5ac8f8f60add6f492e7ec5ffa073ced8e3a1fa7ec83b2e237fe69fd827de1b2a3b89047d0714cace987df38930fe2da1a7a4c94559e3a84d0302d3421 +EBUILD slepc-3.19.1.ebuild 3607 BLAKE2B 618f42170b13aacda3bdf67b34c2ddbe2757a63fd1ff90b2e3c6ce22163e8b2a13b3478309c0d0743c88124ad9fee31624688ac286a289d658b781c9950b4f78 SHA512 db16bbd5ac8f8f60add6f492e7ec5ffa073ced8e3a1fa7ec83b2e237fe69fd827de1b2a3b89047d0714cace987df38930fe2da1a7a4c94559e3a84d0302d3421 MISC metadata.xml 534 BLAKE2B d69665b8748404c15776f2a3759477d0ea6ab79f7f0f33fd2199310641bfb47d96189e3479728cafd4978af9c913aaa424221a1aef42727f9af244ff9040c708 SHA512 cc16480b710ee9977bb3fd3b1e3c664b29127a5385952d41e62578d0d22c06a06a2f5194ca9fc7521d8dbbc9b1ffd53fc5e019128c62910b556f3fceefe7c8ae diff --git a/sci-mathematics/slepc/slepc-3.19.1.ebuild b/sci-mathematics/slepc/slepc-3.19.1.ebuild new file mode 100644 index 000000000000..3622655a7bd1 --- /dev/null +++ b/sci-mathematics/slepc/slepc-3.19.1.ebuild @@ -0,0 +1,125 @@ +# Copyright 1999-2023 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=8 + +PYTHON_COMPAT=( python3_{9..11} ) + +inherit python-any-r1 + +DESCRIPTION="Scalable Library for Eigenvalue Problem Computations" +HOMEPAGE="https://slepc.upv.es/" +SRC_URI=" + !doc? ( https://slepc.upv.es/download/distrib/${P}.tar.gz ) + doc? ( https://slepc.upv.es/download/distrib/${PN}-with-docs-${PV}.tar.gz )" + +LICENSE="LGPL-3" +SLOT="0" +KEYWORDS="~amd64 ~x86" +IUSE="arpack complex-scalars doc +examples mpi" + +REQUIRED_USE="arpack? ( mpi )" + +RDEPEND=" + =sci-mathematics/petsc-$(ver_cut 1-2)*:=[examples,mpi=,complex-scalars=] + arpack? ( sci-libs/arpack[mpi=] ) + mpi? ( virtual/mpi ) +" + +DEPEND="${RDEPEND} + ${PYTHON_DEPS} + virtual/pkgconfig + dev-util/cmake +" + +MAKEOPTS="${MAKEOPTS} V=1" + +src_unpack() { + use doc || unpack ${P}.tar.gz + use doc && unpack ${PN}-with-docs-${PV}.tar.gz +} + +src_configure() { + # *sigh* + addpredict "${PETSC_DIR}"/.nagged + + # Make sure that the environment is set up correctly: + unset PETSC_DIR + unset PETSC_ARCH + source "${EPREFIX}"/etc/env.d/99petsc + export PETSC_DIR + export PETSC_ARCH + export SLEPC_DIR="${S}" + + # configure is a custom python script and doesn't want to have default + # configure arguments that we set with econf + if use arpack; then + ./configure \ + --prefix="${EPREFIX}/usr/$(get_libdir)/slepcdir" \ + --with-arpack=1 \ + --with-arpack-lib="$(usex mpi "-lparpack -larpack" "-larpack")" + else + ./configure \ + --prefix="${EPREFIX}/usr/$(get_libdir)/slepcdir" \ + --with-arpack=0 + fi +} + +src_install() { + emake DESTDIR="${ED}" install + + # + # Clean up the mess: + # + + # put all include directories under a proper subdirectory + mkdir "${ED}"/usr/include || die "mkdir failed (include)" + mv "${ED}"/usr/{$(get_libdir)/slepcdir/include,include/slepc} || die "mv failed (include)" + + # put libraries and pkconfig file into proper place + mv "${ED}"/usr/$(get_libdir)/slepcdir/lib/{libslepc*,pkgconfig} \ + "${ED}/usr/$(get_libdir)" || die "mv failed (lib)" + + # move share to proper location + mv "${ED}"/usr/{$(get_libdir)/slepcdir/share,share} || die "mv failed (share)" + + # fix pc files: + sed -i \ + -e 's#include$#include/slepc#' \ + -e "s#lib\$#$(get_libdir)#" \ + -e "s#^prefix=.*slepcdir\$#prefix=${EPREFIX}/usr#" \ + "${ED}"/usr/$(get_libdir)/pkgconfig/*.pc || die "sed failed (pkgconfig)" + + # recreate a "valid" slepcdir: + for i in "${ED}"/usr/$(get_libdir)/*; do + [ $(basename $i) = slepcdir ] && continue + ln -s "${EPREFIX}/usr/$(get_libdir)/$(basename $i)" \ + "${ED}/usr/$(get_libdir)/slepcdir/lib/$(basename $i)" || die "ln failed (slepcdir)" + done + ln -s "${EPREFIX}"/usr/include/slepc/ \ + "${ED}/usr/$(get_libdir)/slepcdir/include" || die "ln failed (slepcdir)" + mkdir "${ED}/usr/$(get_libdir)/slepcdir/share" || die "mkdir fialed (slepcdir)" + ln -s "${EPREFIX}"/usr/share/slepc/ \ + "${ED}/usr/$(get_libdir)/slepcdir/share/slepc" || die "ln failed (slepcdir)" + + if use examples; then + mkdir -p "${ED}"/usr/share/doc/${PF} || die "mkdir failed (examples)" + mv "${ED}"/usr/share/slepc/examples "${ED}"/usr/share/doc/${PF} || die "mv failed (examples)" + ln -s "${EPREFIX}"/usr/share/doc/${PF}/examples "${ED}"/usr/share/slepc/examples || die "ln failed (examples)" + docompress -x /usr/share/doc/${PF}/examples + else + rm -r "${ED}"/usr/share/slepc/examples || die "rm failed (examples)" + fi + + if use doc ; then + dodoc docs/slepc.pdf + docinto html + dodoc -r docs/*.html docs/manualpages + fi + + # add PETSC_DIR to environmental variables + cat >> 99slepc <<- EOF + SLEPC_DIR=${EPREFIX}/usr/$(get_libdir)/slepcdir + EOF + doenvd 99slepc +} |