diff options
Diffstat (limited to 'sci-physics')
-rw-r--r-- | sci-physics/Manifest.gz | bin | 6034 -> 5701 bytes | |||
-rw-r--r-- | sci-physics/harminv/Manifest | 4 | ||||
-rw-r--r-- | sci-physics/harminv/files/harminv-1.3.1-configure.ac.patch | 31 | ||||
-rw-r--r-- | sci-physics/harminv/harminv-1.3.1-r1.ebuild | 33 | ||||
-rw-r--r-- | sci-physics/harminv/metadata.xml | 15 | ||||
-rw-r--r-- | sci-physics/meep/Manifest | 5 | ||||
-rw-r--r-- | sci-physics/meep/files/meep-1.2-no-auto-mpb.patch | 16 | ||||
-rw-r--r-- | sci-physics/meep/files/meep-1.2-pc-no-ldflags.patch | 12 | ||||
-rw-r--r-- | sci-physics/meep/meep-1.3.ebuild | 58 | ||||
-rw-r--r-- | sci-physics/meep/metadata.xml | 14 | ||||
-rw-r--r-- | sci-physics/root/Manifest | 2 | ||||
-rw-r--r-- | sci-physics/root/root-9999.ebuild | 10 |
12 files changed, 4 insertions, 196 deletions
diff --git a/sci-physics/Manifest.gz b/sci-physics/Manifest.gz Binary files differindex 1e516839373a..8febcca3a63f 100644 --- a/sci-physics/Manifest.gz +++ b/sci-physics/Manifest.gz diff --git a/sci-physics/harminv/Manifest b/sci-physics/harminv/Manifest deleted file mode 100644 index 98b53f4c6021..000000000000 --- a/sci-physics/harminv/Manifest +++ /dev/null @@ -1,4 +0,0 @@ -AUX harminv-1.3.1-configure.ac.patch 965 BLAKE2B f5cebe4567fe94dd38d04c380bc4d1cfdfb8c84814ae70eeee6ec7524da9f4c6ec7538109562f0b7518194a357aedffbde14c6e53890a44aafc5c71b0cf1d7b6 SHA512 c177dae71d23df73f09d1754edfcbb464970b6bb987c46f880d3eee288ab69a293b885b85414b519a32323e8c5f83f853d68339eaed2b8d4c5734c5e55a96691 -DIST harminv-1.3.1.tar.gz 327832 BLAKE2B 5aa80f6cde0409d4daaaf9923e17a97a5592321e5d3c671d6ae07e68e62d42e987e51944ecb3d27fe1bff3cab0754c6e6ec8565e1c5ba34471896f2d6bdee0e7 SHA512 7dc1c2f658d9722cd64558a702f04409d10b87cb4ff7247c2fbd7f8d9a24387fef1b8ba4b7b183727bef21891c32d27d83aaa3607d063f8ad60702be4bfe5c3c -EBUILD harminv-1.3.1-r1.ebuild 753 BLAKE2B 1da92a3b0405c4a7a4ea0d91a604b9ebce3c349e2a8f79010d3dc8075d77675e348d93d69dfb79776efab7cc34f4a55ef603b95c625b35e1f26a367a310bd77f SHA512 4eafc9b442d5463971bafcd57003073544117fa04510e42ed0e8d62032b072fee1e5d6d42c802596aed67371b66cc4647a7f814e2cde8c9334f0647e09d37729 -MISC metadata.xml 632 BLAKE2B 427eda18fb4a538628cf1854ee0c1e48a76997ffe248ec971c5324e53a847cc3c87dcdc76dab8fcc0c51589c17344f100a8dff8b3e2d201b0d91a57e7593ce70 SHA512 ec47048cde692010d9b562d430992630d9107e65d401a7f429a2e0658c8edaab2f200b2d84c233fe6481330c0ded1ff6672fd3b7b9f75a5130129e3037b9da9d diff --git a/sci-physics/harminv/files/harminv-1.3.1-configure.ac.patch b/sci-physics/harminv/files/harminv-1.3.1-configure.ac.patch deleted file mode 100644 index 508a8c177902..000000000000 --- a/sci-physics/harminv/files/harminv-1.3.1-configure.ac.patch +++ /dev/null @@ -1,31 +0,0 @@ ---- a/configure.ac -+++ b/configure.ac -@@ -9,7 +9,7 @@ - # *not* the same as the "public" version number. CURRENT:REVISION:AGE - SHARED_VERSION_INFO="2:4:0" - AC_SUBST(SHARED_VERSION_INFO) --AM_ENABLE_SHARED(no) dnl shared libs cause too many headaches to be default -+AM_ENABLE_SHARED(yes) dnl shared libs cause too many headaches to be default - - ############################################################################## - -@@ -123,9 +123,16 @@ - ########################################################################### - - # Checks for BLAS/LAPACK libraries: -- --ACX_BLAS([], [AC_MSG_ERROR([BLAS library not found])]) --ACX_LAPACK([], [AC_MSG_ERROR([LAPACK library not found])]) -+sinclude(acx_blas.m4) -+ACX_BLAS -+if test x"$BLAS_LIBS" = x ; then -+ AC_MSG_ERROR([BLAS library not found]) -+fi -+sinclude(acx_lapack.m4) -+ACX_LAPACK -+if test x"$LAPACK_LIBS" = x ; then -+ AC_MSG_ERROR([LAPACK library not found]) -+fi - - LIBS="$LAPACK_LIBS $BLAS_LIBS $LIBS $FLIBS" - diff --git a/sci-physics/harminv/harminv-1.3.1-r1.ebuild b/sci-physics/harminv/harminv-1.3.1-r1.ebuild deleted file mode 100644 index 396cc6fe8440..000000000000 --- a/sci-physics/harminv/harminv-1.3.1-r1.ebuild +++ /dev/null @@ -1,33 +0,0 @@ -# Copyright 1999-2016 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 - -EAPI=6 - -inherit autotools toolchain-funcs - -DESCRIPTION="Extraction of complex frequencies and amplitudes from time series" -HOMEPAGE="http://ab-initio.mit.edu/harminv/" -SRC_URI="http://ab-initio.mit.edu/${PN}/${P}.tar.gz" - -LICENSE="GPL-2" -SLOT="0" -KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" -IUSE="static-libs" - -RDEPEND="virtual/lapack" -DEPEND="${RDEPEND} - virtual/pkgconfig" - -PATCHES=( "${FILESDIR}"/${P}-configure.ac.patch ) - -src_prepare() { - default - eautoreconf -} - -src_configure() { - econf \ - $(use_enable static-libs static) \ - --with-blas="$($(tc-getPKG_CONFIG) --libs blas)" \ - --with-lapack="$($(tc-getPKG_CONFIG) --libs lapack)" -} diff --git a/sci-physics/harminv/metadata.xml b/sci-physics/harminv/metadata.xml deleted file mode 100644 index 5ddaae490a92..000000000000 --- a/sci-physics/harminv/metadata.xml +++ /dev/null @@ -1,15 +0,0 @@ -<?xml version="1.0" encoding="UTF-8"?> -<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> -<pkgmetadata> - <maintainer type="project"> - <email>sci-physics@gentoo.org</email> - <name>Gentoo Physics Project</name> - </maintainer> - <longdescription lang="en"> - Harminv is a program to solve the problem of harmonic inversion, - given a discrete-time, finite-length signal that consists of a sum of - finitely-many sinusoids (possibly exponentially decaying) in a given - bandwidth, it determines the frequencies, decay constants, amplitudes, - and phases of those sinusoids. -</longdescription> -</pkgmetadata> diff --git a/sci-physics/meep/Manifest b/sci-physics/meep/Manifest deleted file mode 100644 index c4694fe3022d..000000000000 --- a/sci-physics/meep/Manifest +++ /dev/null @@ -1,5 +0,0 @@ -AUX meep-1.2-no-auto-mpb.patch 652 BLAKE2B d5e2eadafa10bd9b2aa58f0eae3f57f297ef874a1a89b89dd3d0e44910738490d348e5e61ac345088f90a9b6c5dae36c9863a82b2efc4393361366e5c71b2065 SHA512 4a25e919ac828920fb1ad2395acb897e0b9d9123fa55ee3ed33a4c07e79d250602cb496435482710315c077d3d5408d0192d629afd70dca64aedc7a649c7091f -AUX meep-1.2-pc-no-ldflags.patch 503 BLAKE2B c571fd76c2ad9449245cb6fee07bcef8d815814e486a28e5d8283ce696d0feb0424319020b368cd7ebaa4685f2fec47747516ffed74e31620671bc1e7b73a921 SHA512 2e8602f21814f4edef4b0572180b0b4f41f91a23d7e2576da6a2c62d602e55e9a70b5c7124cb60b7ea4d2f6debd10db3a30aa451d4b6d82eed7a7d9655a26a82 -DIST meep-1.3.tar.gz 740890 BLAKE2B e94fe9709c42ff99f764e34e0db0aa7dc7a8dfa640f539d44e952bf9870686956a8cbf24d3ce0fae95f44c659b5a19075b6377ef2aa68fb51166f09a3e0f7a3b SHA512 4ad8d68f27d9971fe6dd4b8440f78d5b141fe747a80c50da55ecbc56a5beb0c2d31441fb46b54cac3c62d4cb34cb1ce6819c06bd2c54bc35f129ba683dc84aea -EBUILD meep-1.3.ebuild 1137 BLAKE2B 09c1a9a0c3aa185d11f06e65a523ab03b7dfe7a7725b926d68b46b39f97cee9abd987ff0266a01f85929f41a764da2dd54e056136289374fa061e6fd2a485513 SHA512 c4bfee913eb8d32b0e5f67ffa87a27eff18292dcf3302b29fe1531865e02b564e8c8f43bdc4f4d8d357275238f827d82c4102fc5e68726a9ff67f7ea93ad3da9 -MISC metadata.xml 525 BLAKE2B 3dbcefd51f53261e0adee37fc29279cc1b0bd9df58027ebd50b7373a41fa1af8e9c35d72a3eefad6b0e23b9108c0b5ab2a8ce923a3e1f982d4982c49b46367f1 SHA512 1d6f8f93e9ad60102daeabf5a6017f0f3724b2bfa2ecfca30e6e2069bb624e5067a8743b8839996b3eadc627f431b84b911b2ea4de9a5a97ee30921e158318cd diff --git a/sci-physics/meep/files/meep-1.2-no-auto-mpb.patch b/sci-physics/meep/files/meep-1.2-no-auto-mpb.patch deleted file mode 100644 index 8c287f208d65..000000000000 --- a/sci-physics/meep/files/meep-1.2-no-auto-mpb.patch +++ /dev/null @@ -1,16 +0,0 @@ -diff -Nur meep-1.2.orig/configure.ac meep-1.2/configure.ac ---- meep-1.2.orig/configure.ac 2012-08-14 21:52:13.000000000 +0100 -+++ meep-1.2/configure.ac 2012-08-14 22:00:55.000000000 +0100 -@@ -161,8 +161,10 @@ - - ########################################################################### - # MPB library -- --AC_CHECK_HEADER(mpb.h, [have_mpb=maybe], [have_mpb=no]) -+AC_ARG_WITH(mpb, [AC_HELP_STRING([--without-mpb],[do not build with mpb])], ok=$withval, ok=yes) -+if test "$ok" = "yes"; then -+ AC_CHECK_HEADER(mpb.h, [have_mpb=maybe], [have_mpb=no]) -+fi - - if test $have_mpb = maybe; then - if test "x$acx_lapack_ok" = x -a "$have_harminv" = xno; then diff --git a/sci-physics/meep/files/meep-1.2-pc-no-ldflags.patch b/sci-physics/meep/files/meep-1.2-pc-no-ldflags.patch deleted file mode 100644 index d7b2f72eaffc..000000000000 --- a/sci-physics/meep/files/meep-1.2-pc-no-ldflags.patch +++ /dev/null @@ -1,12 +0,0 @@ -diff -Nur meep-1.2.orig/configure.ac meep-1.2/configure.ac ---- meep-1.2.orig/configure.ac 2012-08-14 21:52:13.000000000 +0100 -+++ meep-1.2/configure.ac 2012-08-14 21:54:49.000000000 +0100 -@@ -224,7 +224,7 @@ - ############################################################################## - # Libraries and flags (other than -lmeep) required to link Meep: - --MEEPLIBS="$LDFLAGS $LIBS" -+MEEPLIBS="$LIBS" - AC_SUBST(MEEPLIBS) - - ############################################################################## diff --git a/sci-physics/meep/meep-1.3.ebuild b/sci-physics/meep/meep-1.3.ebuild deleted file mode 100644 index 6cc3d1495390..000000000000 --- a/sci-physics/meep/meep-1.3.ebuild +++ /dev/null @@ -1,58 +0,0 @@ -# Copyright 1999-2016 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 - -EAPI=6 - -inherit autotools - -DESCRIPTION="Simulation software to model electromagnetic systems" -HOMEPAGE="http://ab-initio.mit.edu/meep/" -SRC_URI="http://ab-initio.mit.edu/meep/${P}.tar.gz" - -LICENSE="GPL-2" -SLOT="0" -KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" -IUSE="examples hdf5 guile mpi" - -RDEPEND=" - sci-libs/fftw:3.0= - sci-libs/gsl:= - sci-physics/harminv - guile? ( >=sci-libs/libctl-3.2 ) - hdf5? ( sci-libs/hdf5:= ) - mpi? ( virtual/mpi )" -DEPEND="${RDEPEND} - virtual/pkgconfig" - -PATCHES=( - "${FILESDIR}"/${PN}-1.2-pc-no-ldflags.patch - "${FILESDIR}"/${PN}-1.2-no-auto-mpb.patch -) - -src_prepare() { - default - eautoreconf -} - -src_configure() { - econf \ - $(use_with mpi) \ - $(use_with hdf5) \ - $(use_with guile libctl) -} - -src_test() { - # pml test buggy with optimization on - # http://thread.gmane.org/gmane.comp.science.electromagnetism.meep.general/4579 - emake -C tests pml CXXFLAGS="-O0" - emake check -} - -src_install() { - default - - if use examples; then - dodoc -r examples - docompress -x /usr/share/doc/${PF}/examples - fi -} diff --git a/sci-physics/meep/metadata.xml b/sci-physics/meep/metadata.xml deleted file mode 100644 index a6fba91cb5cc..000000000000 --- a/sci-physics/meep/metadata.xml +++ /dev/null @@ -1,14 +0,0 @@ -<?xml version="1.0" encoding="UTF-8"?> -<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> -<pkgmetadata> -<maintainer type="project"> - <email>sci-physics@gentoo.org</email> - <name>Gentoo Physics Project</name> -</maintainer> -<longdescription lang="en"> - The MIT Electromagnetic Equation Propagation (MEEP) is a - finite-difference time-domain (FDTD) simulation software package - developed at MIT to model electromagnetic systems, along with the MPB - eigenmode package. -</longdescription> -</pkgmetadata> diff --git a/sci-physics/root/Manifest b/sci-physics/root/Manifest index 4ac672a7714c..61a1c2fa9bba 100644 --- a/sci-physics/root/Manifest +++ b/sci-physics/root/Manifest @@ -13,5 +13,5 @@ EBUILD root-6.12.06-r11.ebuild 7866 BLAKE2B e12510ed1d12803dd4bac0ad21616aa3d1ce EBUILD root-6.14.08-r4.ebuild 8052 BLAKE2B 82c9067edf53e5102ccbe89c63e3ab122d17dacf2cc686e0c7450238b110fb796490dc8887d59b2c7287f4a74fc05d773fdfab11aa7a6d932b82993349699105 SHA512 5027873eefb0f5655f8d990ed434a84a0a72f39561fca2e6537b9248406c48ad8636f46942680c62d47665629fc80bcd54092852ea6b954946b3ac980efa1dbb EBUILD root-6.16.00-r3.ebuild 8138 BLAKE2B f87aa6680d0ff4887ae4149e16d38dd525056441f8465d4375059eec662de50cecb9eb64d00e76f4895d11bafb2dbbd2f47113e7b5cd008d6f25f67b78a7c0d0 SHA512 1e3d0a46d8b3198fe6334a9f8ebfe47144da445042e9fb43a53328c42bfa29e246347586861a83fd594000af458ad2db52f8950fd309547b4b71f7c6f6d6d967 EBUILD root-6.18.00-r2.ebuild 7600 BLAKE2B 7522424247f422a763fb957948bc4e39a8121daaa79476b1d14d849afb7856ea1df18a6bf2f900b37add07cdadc4779808f70cbaed2123385759187163339a03 SHA512 f3d7fc72787d547382487d0496729f392af6617372a73acf0d6b7cec16faa8c029d739e61ad0a198cb95299b959ca0efbc75552e6ccd24bc98b1ac1016bcc81a -EBUILD root-9999.ebuild 7616 BLAKE2B d1c3f74707686d2d4804f6efac7cfa734479e86619cbd1a8c977187535555e2ae759d27171f1d9c7ee0b13b7dc98ac5cffa87bc1bbe3a813ce94db083b35181d SHA512 bc88053326c6a61dff904107437fcb7e3ae3b714b3afd39ca7530785716f155c2275811fbf3801ed3364dccdfaa2b0b50a6287d1106ce02197d2cfcedca1194d +EBUILD root-9999.ebuild 7517 BLAKE2B 6cee68b58c2e6fe2d30ffbb08af824a40e2b815aff1980c8d4d39f80579749d9f92b2e3eab3628bd368d5b3fa624d368d0f1657610a04d580cae3fa1f0a7cd49 SHA512 bd21527629e472f870036afea07d4222a03ab69e9238d8201c5eacdc2ce3025561be636aa430d6530bffdb8d7f66c193a657ba39d870eab7aae01614516d6350 MISC metadata.xml 3218 BLAKE2B f23175b1a5998bbecdcdb6e5f42d08bd8e16aaeee79f43d30e0906977f389e18a19ddceeba24009360c2f717c29162c8e30b807bda993492f27429802dc62883 SHA512 d3bdc5bce1d1ac904e5a7a9f21bca65deb480ecbd1362a3251c93e09ab07fdcdd6dfd8900e62df3853b7e200880850d9010122500a081fdedb6b43adae25a6bd diff --git a/sci-physics/root/root-9999.ebuild b/sci-physics/root/root-9999.ebuild index 0b58a32c0138..e841fafab73c 100644 --- a/sci-physics/root/root-9999.ebuild +++ b/sci-physics/root/root-9999.ebuild @@ -16,9 +16,9 @@ HOMEPAGE="https://root.cern" IUSE="+X aqua +asimage +c++11 c++14 c++17 cuda +davix debug emacs +examples fits fftw fortran +gdml graphviz +gsl http libcxx +minuit - mysql nosplash odbc +opengl oracle postgres prefix pythia6 pythia8 - +python qt5 R +roofit root7 shadow sqlite +ssl +tbb test +tmva - +unuran vc vmc +xml xrootd" + mysql odbc +opengl oracle postgres prefix pythia6 pythia8 +python + qt5 R +roofit root7 shadow sqlite +ssl +tbb test +tmva +unuran vc + vmc +xml xrootd" if [[ ${PV} =~ "9999" ]] ; then inherit git-r3 @@ -136,10 +136,6 @@ src_prepare() { # CSS should use local images sed -i -e 's,http://.*/,,' etc/html/ROOT.css || die "html sed failed" - - if use nosplash; then - sed -i -e '/bool gNoLogo/s@false@true@' rootx/src/rootx.cxx - fi } # Note: ROOT uses bundled clang because it is patched and API-incompatible |